HEADER TRANSCRIPTION/RNA 16-MAY-13 4KRF TITLE STRUCTURE OF HUMAN ARGONAUTE-1 LET-7 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGONAUTE-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARGONAUTE1, HAGO1, EUKARYOTIC TRANSLATION INITIATION FACTOR COMPND 5 2C 1, EIF-2C 1, EIF2C 1, PUTATIVE RNA-BINDING PROTEIN Q99; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'- COMPND 9 R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*UP*U) COMPND 10 -3'); COMPND 11 CHAIN: R; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: LET-7 MIRNA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AGO1, EIF2C1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MULTI-BAC, PFL; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS EUKARYOTIC ARGONAUTE, GENE REGULATION, RNAI, SLICER, TRANSCRIPTION- KEYWDS 2 RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.R.FAEHNLE,E.ELKAYAM,L.JOSHUA-TOR REVDAT 3 28-FEB-24 4KRF 1 SEQADV REVDAT 2 17-JUL-13 4KRF 1 JRNL REVDAT 1 19-JUN-13 4KRF 0 JRNL AUTH C.R.FAEHNLE,E.ELKAYAM,A.D.HAASE,G.J.HANNON,L.JOSHUA-TOR JRNL TITL THE MAKING OF A SLICER: ACTIVATION OF HUMAN ARGONAUTE-1. JRNL REF CELL REP V. 3 1901 2013 JRNL REFN ESSN 2211-1247 JRNL PMID 23746446 JRNL DOI 10.1016/J.CELREP.2013.05.033 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 50614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5680 - 5.0610 1.00 3731 159 0.1722 0.2100 REMARK 3 2 5.0610 - 4.0182 1.00 3705 149 0.1481 0.1649 REMARK 3 3 4.0182 - 3.5106 1.00 3662 150 0.1595 0.1809 REMARK 3 4 3.5106 - 3.1898 1.00 3653 151 0.1778 0.2306 REMARK 3 5 3.1898 - 2.9612 1.00 3677 155 0.1840 0.2187 REMARK 3 6 2.9612 - 2.7867 1.00 3662 146 0.1889 0.2392 REMARK 3 7 2.7867 - 2.6471 1.00 3670 152 0.1900 0.2234 REMARK 3 8 2.6471 - 2.5319 1.00 3655 152 0.1842 0.2559 REMARK 3 9 2.5319 - 2.4345 1.00 3635 146 0.1882 0.2404 REMARK 3 10 2.4345 - 2.3505 0.99 3641 154 0.1920 0.2875 REMARK 3 11 2.3505 - 2.2770 0.96 3525 145 0.1931 0.2505 REMARK 3 12 2.2770 - 2.2119 0.88 3215 134 0.2038 0.2915 REMARK 3 13 2.2119 - 2.1537 0.77 2816 118 0.2111 0.2710 REMARK 3 14 2.1537 - 2.1010 0.64 2364 92 0.2395 0.3294 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7025 REMARK 3 ANGLE : 0.723 9574 REMARK 3 CHIRALITY : 0.048 1065 REMARK 3 PLANARITY : 0.003 1189 REMARK 3 DIHEDRAL : 11.476 2700 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 19:43) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1474 10.1732 -36.7117 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.3200 REMARK 3 T33: 0.2631 T12: 0.0048 REMARK 3 T13: 0.0511 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.7641 L22: 1.3186 REMARK 3 L33: 3.3549 L12: -0.1434 REMARK 3 L13: -0.6157 L23: 1.5130 REMARK 3 S TENSOR REMARK 3 S11: 0.1161 S12: -0.3813 S13: 0.4508 REMARK 3 S21: -0.1281 S22: -0.0385 S23: 0.0509 REMARK 3 S31: -0.2474 S32: 0.4099 S33: -0.0847 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 44:169) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7664 27.2187 -64.3762 REMARK 3 T TENSOR REMARK 3 T11: 0.3274 T22: 0.2193 REMARK 3 T33: 0.1748 T12: -0.0004 REMARK 3 T13: 0.0638 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 2.3863 L22: 2.9964 REMARK 3 L33: 4.2759 L12: -0.2088 REMARK 3 L13: 1.0463 L23: -0.7815 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.0002 S13: 0.2513 REMARK 3 S21: -0.3054 S22: -0.0557 S23: -0.0615 REMARK 3 S31: -0.5404 S32: 0.0522 S33: 0.0774 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 170:301) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3215 12.0239 -70.7109 REMARK 3 T TENSOR REMARK 3 T11: 0.3196 T22: 0.4401 REMARK 3 T33: 0.2910 T12: -0.0180 REMARK 3 T13: -0.0343 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.8241 L22: 0.4705 REMARK 3 L33: 2.9076 L12: -0.5758 REMARK 3 L13: 1.8801 L23: -1.0571 REMARK 3 S TENSOR REMARK 3 S11: 0.1109 S12: -0.2349 S13: -0.3888 REMARK 3 S21: -0.1151 S22: 0.2698 S23: 0.2315 REMARK 3 S31: 0.2015 S32: -0.6052 S33: -0.2760 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 302:362) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3919 15.9353 -78.0832 REMARK 3 T TENSOR REMARK 3 T11: 0.2760 T22: 0.4882 REMARK 3 T33: 0.2989 T12: -0.0587 REMARK 3 T13: -0.0462 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.3984 L22: 2.7344 REMARK 3 L33: 7.1484 L12: -1.9067 REMARK 3 L13: 3.3643 L23: -3.7712 REMARK 3 S TENSOR REMARK 3 S11: -0.1555 S12: 0.0278 S13: 0.0768 REMARK 3 S21: 0.1015 S22: 0.3806 S23: 0.1875 REMARK 3 S31: -0.2633 S32: -0.6110 S33: -0.1179 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 363:411) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3162 3.0796 -55.7380 REMARK 3 T TENSOR REMARK 3 T11: 0.3391 T22: 0.2554 REMARK 3 T33: 0.2647 T12: 0.0893 REMARK 3 T13: 0.0666 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.6297 L22: 2.0394 REMARK 3 L33: 2.2147 L12: 1.8426 REMARK 3 L13: -1.8872 L23: -2.0401 REMARK 3 S TENSOR REMARK 3 S11: -0.3167 S12: 0.0602 S13: -0.2639 REMARK 3 S21: -0.5453 S22: 0.0271 S23: -0.1459 REMARK 3 S31: 0.4632 S32: 0.2424 S33: 0.3104 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 412:578) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3623 -3.4172 -31.8924 REMARK 3 T TENSOR REMARK 3 T11: 0.2264 T22: 0.3118 REMARK 3 T33: 0.4193 T12: -0.0532 REMARK 3 T13: -0.0106 T23: 0.0751 REMARK 3 L TENSOR REMARK 3 L11: 2.0725 L22: 1.0331 REMARK 3 L33: 2.2605 L12: -0.6510 REMARK 3 L13: 0.9066 L23: -0.7310 REMARK 3 S TENSOR REMARK 3 S11: 0.0833 S12: -0.3139 S13: -0.6174 REMARK 3 S21: -0.0298 S22: 0.1714 S23: 0.4731 REMARK 3 S31: 0.2496 S32: -0.5281 S33: -0.1023 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 579:697) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8157 20.3738 -30.3638 REMARK 3 T TENSOR REMARK 3 T11: 0.2682 T22: 0.1455 REMARK 3 T33: 0.2550 T12: -0.0158 REMARK 3 T13: 0.1160 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 2.5684 L22: 2.1133 REMARK 3 L33: 2.5491 L12: 0.1261 REMARK 3 L13: -0.0898 L23: 0.6791 REMARK 3 S TENSOR REMARK 3 S11: 0.1939 S12: -0.0410 S13: 0.2439 REMARK 3 S21: -0.1249 S22: 0.0625 S23: -0.0348 REMARK 3 S31: -0.4185 S32: 0.0743 S33: -0.1154 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 698:803) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2332 5.7560 -36.5532 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1720 REMARK 3 T33: 0.1544 T12: 0.0165 REMARK 3 T13: 0.0177 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.7536 L22: 0.7983 REMARK 3 L33: 1.6749 L12: 0.0961 REMARK 3 L13: -1.5666 L23: -0.4058 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: -0.2247 S13: 0.0433 REMARK 3 S21: -0.1057 S22: -0.0738 S23: -0.0146 REMARK 3 S31: 0.0346 S32: 0.2505 S33: -0.0148 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 804:857) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8028 16.0164 -38.3124 REMARK 3 T TENSOR REMARK 3 T11: 0.2269 T22: 0.2435 REMARK 3 T33: 0.2373 T12: 0.0753 REMARK 3 T13: 0.0068 T23: -0.0542 REMARK 3 L TENSOR REMARK 3 L11: 5.1494 L22: 6.0812 REMARK 3 L33: 3.4108 L12: 0.0631 REMARK 3 L13: 0.0945 L23: -1.7978 REMARK 3 S TENSOR REMARK 3 S11: 0.0992 S12: -0.0750 S13: 0.3588 REMARK 3 S21: -0.0658 S22: -0.1706 S23: 0.3410 REMARK 3 S31: -0.4981 S32: -0.5782 S33: 0.0101 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079700. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50618 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.430 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350, 9% ISO-PROPANOL, 0.1M REMARK 280 TRIS PH 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.86500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 TYR A 13 REMARK 465 LEU A 14 REMARK 465 PRO A 15 REMARK 465 PRO A 16 REMARK 465 GLY A 119 REMARK 465 GLU A 120 REMARK 465 GLY A 121 REMARK 465 GLN A 272 REMARK 465 MET A 273 REMARK 465 GLY A 602 REMARK 465 ASP A 603 REMARK 465 GLY A 604 REMARK 465 GLU A 819 REMARK 465 HIS A 820 REMARK 465 ASP A 821 REMARK 465 SER A 822 REMARK 465 GLY A 823 REMARK 465 GLU A 824 REMARK 465 GLY A 825 REMARK 465 SER A 826 REMARK 465 HIS A 827 REMARK 465 ILE A 828 REMARK 465 SER A 829 REMARK 465 GLY A 830 REMARK 465 GLN A 831 REMARK 465 SER A 832 REMARK 465 ASN A 833 REMARK 465 GLY A 834 REMARK 465 G R 19 REMARK 465 G R 20 REMARK 465 G R 23 REMARK 465 U R 24 REMARK 465 A R 25 REMARK 465 U R 26 REMARK 465 A R 27 REMARK 465 G R 28 REMARK 465 U R 29 REMARK 465 U R 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U R 1 P U R 1 OP3 -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 41 48.60 -74.38 REMARK 500 ILE A 84 -63.49 -122.27 REMARK 500 LYS A 95 -102.27 -136.56 REMARK 500 GLU A 109 96.57 58.41 REMARK 500 SER A 147 -62.55 -98.32 REMARK 500 TRP A 209 -46.35 73.59 REMARK 500 GLU A 243 -73.52 -63.41 REMARK 500 SER A 621 -61.92 -124.79 REMARK 500 ASN A 737 -48.52 72.26 REMARK 500 PHE A 742 -10.95 -143.41 REMARK 500 MET A 854 58.17 -96.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KRE RELATED DB: PDB DBREF 4KRF A 1 857 UNP Q9UL18 AGO1_HUMAN 1 857 DBREF 4KRF R 1 30 PDB 4KRF 4KRF 1 30 SEQADV 4KRF ALA A 0 UNP Q9UL18 EXPRESSION TAG SEQRES 1 A 858 ALA MET GLU ALA GLY PRO SER GLY ALA ALA ALA GLY ALA SEQRES 2 A 858 TYR LEU PRO PRO LEU GLN GLN VAL PHE GLN ALA PRO ARG SEQRES 3 A 858 ARG PRO GLY ILE GLY THR VAL GLY LYS PRO ILE LYS LEU SEQRES 4 A 858 LEU ALA ASN TYR PHE GLU VAL ASP ILE PRO LYS ILE ASP SEQRES 5 A 858 VAL TYR HIS TYR GLU VAL ASP ILE LYS PRO ASP LYS CYS SEQRES 6 A 858 PRO ARG ARG VAL ASN ARG GLU VAL VAL GLU TYR MET VAL SEQRES 7 A 858 GLN HIS PHE LYS PRO GLN ILE PHE GLY ASP ARG LYS PRO SEQRES 8 A 858 VAL TYR ASP GLY LYS LYS ASN ILE TYR THR VAL THR ALA SEQRES 9 A 858 LEU PRO ILE GLY ASN GLU ARG VAL ASP PHE GLU VAL THR SEQRES 10 A 858 ILE PRO GLY GLU GLY LYS ASP ARG ILE PHE LYS VAL SER SEQRES 11 A 858 ILE LYS TRP LEU ALA ILE VAL SER TRP ARG MET LEU HIS SEQRES 12 A 858 GLU ALA LEU VAL SER GLY GLN ILE PRO VAL PRO LEU GLU SEQRES 13 A 858 SER VAL GLN ALA LEU ASP VAL ALA MET ARG HIS LEU ALA SEQRES 14 A 858 SER MET ARG TYR THR PRO VAL GLY ARG SER PHE PHE SER SEQRES 15 A 858 PRO PRO GLU GLY TYR TYR HIS PRO LEU GLY GLY GLY ARG SEQRES 16 A 858 GLU VAL TRP PHE GLY PHE HIS GLN SER VAL ARG PRO ALA SEQRES 17 A 858 MET TRP LYS MET MET LEU ASN ILE ASP VAL SER ALA THR SEQRES 18 A 858 ALA PHE TYR LYS ALA GLN PRO VAL ILE GLU PHE MET CYS SEQRES 19 A 858 GLU VAL LEU ASP ILE ARG ASN ILE ASP GLU GLN PRO LYS SEQRES 20 A 858 PRO LEU THR ASP SER GLN ARG VAL ARG PHE THR LYS GLU SEQRES 21 A 858 ILE LYS GLY LEU LYS VAL GLU VAL THR HIS CYS GLY GLN SEQRES 22 A 858 MET LYS ARG LYS TYR ARG VAL CYS ASN VAL THR ARG ARG SEQRES 23 A 858 PRO ALA SER HIS GLN THR PHE PRO LEU GLN LEU GLU SER SEQRES 24 A 858 GLY GLN THR VAL GLU CYS THR VAL ALA GLN TYR PHE LYS SEQRES 25 A 858 GLN LYS TYR ASN LEU GLN LEU LYS TYR PRO HIS LEU PRO SEQRES 26 A 858 CYS LEU GLN VAL GLY GLN GLU GLN LYS HIS THR TYR LEU SEQRES 27 A 858 PRO LEU GLU VAL CYS ASN ILE VAL ALA GLY GLN ARG CYS SEQRES 28 A 858 ILE LYS LYS LEU THR ASP ASN GLN THR SER THR MET ILE SEQRES 29 A 858 LYS ALA THR ALA ARG SER ALA PRO ASP ARG GLN GLU GLU SEQRES 30 A 858 ILE SER ARG LEU MET LYS ASN ALA SER TYR ASN LEU ASP SEQRES 31 A 858 PRO TYR ILE GLN GLU PHE GLY ILE LYS VAL LYS ASP ASP SEQRES 32 A 858 MET THR GLU VAL THR GLY ARG VAL LEU PRO ALA PRO ILE SEQRES 33 A 858 LEU GLN TYR GLY GLY ARG ASN ARG ALA ILE ALA THR PRO SEQRES 34 A 858 ASN GLN GLY VAL TRP ASP MET ARG GLY LYS GLN PHE TYR SEQRES 35 A 858 ASN GLY ILE GLU ILE LYS VAL TRP ALA ILE ALA CYS PHE SEQRES 36 A 858 ALA PRO GLN LYS GLN CYS ARG GLU GLU VAL LEU LYS ASN SEQRES 37 A 858 PHE THR ASP GLN LEU ARG LYS ILE SER LYS ASP ALA GLY SEQRES 38 A 858 MET PRO ILE GLN GLY GLN PRO CYS PHE CYS LYS TYR ALA SEQRES 39 A 858 GLN GLY ALA ASP SER VAL GLU PRO MET PHE ARG HIS LEU SEQRES 40 A 858 LYS ASN THR TYR SER GLY LEU GLN LEU ILE ILE VAL ILE SEQRES 41 A 858 LEU PRO GLY LYS THR PRO VAL TYR ALA GLU VAL LYS ARG SEQRES 42 A 858 VAL GLY ASP THR LEU LEU GLY MET ALA THR GLN CYS VAL SEQRES 43 A 858 GLN VAL LYS ASN VAL VAL LYS THR SER PRO GLN THR LEU SEQRES 44 A 858 SER ASN LEU CYS LEU LYS ILE ASN VAL LYS LEU GLY GLY SEQRES 45 A 858 ILE ASN ASN ILE LEU VAL PRO HIS GLN ARG SER ALA VAL SEQRES 46 A 858 PHE GLN GLN PRO VAL ILE PHE LEU GLY ALA ASP VAL THR SEQRES 47 A 858 HIS PRO PRO ALA GLY ASP GLY LYS LYS PRO SER ILE THR SEQRES 48 A 858 ALA VAL VAL GLY SER MET ASP ALA HIS PRO SER ARG TYR SEQRES 49 A 858 CYS ALA THR VAL ARG VAL GLN ARG PRO ARG GLN GLU ILE SEQRES 50 A 858 ILE GLU ASP LEU SER TYR MET VAL ARG GLU LEU LEU ILE SEQRES 51 A 858 GLN PHE TYR LYS SER THR ARG PHE LYS PRO THR ARG ILE SEQRES 52 A 858 ILE PHE TYR ARG ASP GLY VAL PRO GLU GLY GLN LEU PRO SEQRES 53 A 858 GLN ILE LEU HIS TYR GLU LEU LEU ALA ILE ARG ASP ALA SEQRES 54 A 858 CYS ILE LYS LEU GLU LYS ASP TYR GLN PRO GLY ILE THR SEQRES 55 A 858 TYR ILE VAL VAL GLN LYS ARG HIS HIS THR ARG LEU PHE SEQRES 56 A 858 CYS ALA ASP LYS ASN GLU ARG ILE GLY LYS SER GLY ASN SEQRES 57 A 858 ILE PRO ALA GLY THR THR VAL ASP THR ASN ILE THR HIS SEQRES 58 A 858 PRO PHE GLU PHE ASP PHE TYR LEU CYS SER HIS ALA GLY SEQRES 59 A 858 ILE GLN GLY THR SER ARG PRO SER HIS TYR TYR VAL LEU SEQRES 60 A 858 TRP ASP ASP ASN ARG PHE THR ALA ASP GLU LEU GLN ILE SEQRES 61 A 858 LEU THR TYR GLN LEU CYS HIS THR TYR VAL ARG CYS THR SEQRES 62 A 858 ARG SER VAL SER ILE PRO ALA PRO ALA TYR TYR ALA ARG SEQRES 63 A 858 LEU VAL ALA PHE ARG ALA ARG TYR HIS LEU VAL ASP LYS SEQRES 64 A 858 GLU HIS ASP SER GLY GLU GLY SER HIS ILE SER GLY GLN SEQRES 65 A 858 SER ASN GLY ARG ASP PRO GLN ALA LEU ALA LYS ALA VAL SEQRES 66 A 858 GLN VAL HIS GLN ASP THR LEU ARG THR MET TYR PHE ALA SEQRES 1 R 22 U G A G G U A G U A G G U SEQRES 2 R 22 U G U A U A G U U FORMUL 3 HOH *367(H2 O) HELIX 1 1 PRO A 65 PHE A 80 1 16 HELIX 2 2 TRP A 138 SER A 147 1 10 HELIX 3 3 PRO A 153 TYR A 172 1 20 HELIX 4 4 PRO A 227 LEU A 236 1 10 HELIX 5 5 THR A 249 LYS A 261 1 13 HELIX 6 6 VAL A 306 ASN A 315 1 10 HELIX 7 7 THR A 355 ALA A 367 1 13 HELIX 8 8 SER A 369 SER A 385 1 17 HELIX 9 9 TYR A 386 LEU A 388 5 3 HELIX 10 10 ASP A 389 PHE A 395 1 7 HELIX 11 11 ARG A 461 ALA A 479 1 19 HELIX 12 12 GLY A 495 ASP A 497 5 3 HELIX 13 13 SER A 498 TYR A 510 1 13 HELIX 14 14 PRO A 525 THR A 536 1 12 HELIX 15 15 VAL A 547 LYS A 552 1 6 HELIX 16 16 SER A 554 LEU A 569 1 16 HELIX 17 17 PRO A 578 ARG A 581 5 4 HELIX 18 18 SER A 582 GLN A 587 5 6 HELIX 19 19 ASP A 639 ARG A 656 1 18 HELIX 20 20 PRO A 670 GLY A 672 5 3 HELIX 21 21 GLN A 673 GLU A 693 1 21 HELIX 22 22 ASP A 717 ARG A 721 5 5 HELIX 23 23 THR A 773 CYS A 785 1 13 HELIX 24 24 PRO A 798 LEU A 815 1 18 HELIX 25 25 ASP A 836 VAL A 844 1 9 SHEET 1 A11 TYR A 623 GLN A 630 0 SHEET 2 A11 SER A 608 SER A 615 -1 N THR A 610 O ARG A 628 SHEET 3 A11 VAL A 589 THR A 597 -1 N THR A 597 O ILE A 609 SHEET 4 A11 ARG A 661 ASP A 667 1 O ASP A 667 N ALA A 594 SHEET 5 A11 GLY A 699 GLN A 706 1 O THR A 701 N PHE A 664 SHEET 6 A11 SER A 761 ASP A 768 -1 O HIS A 762 N GLN A 706 SHEET 7 A11 ASP A 745 CYS A 749 -1 N PHE A 746 O TYR A 763 SHEET 8 A11 THR A 732 VAL A 734 -1 N THR A 732 O CYS A 749 SHEET 9 A11 THR A 404 VAL A 410 -1 N ARG A 409 O THR A 733 SHEET 10 A11 LYS A 34 ALA A 40 -1 N LYS A 34 O VAL A 410 SHEET 11 A11 LEU A 713 CYS A 715 -1 O PHE A 714 N LEU A 39 SHEET 1 B 4 THR A 173 VAL A 175 0 SHEET 2 B 4 SER A 178 PHE A 180 -1 O PHE A 180 N THR A 173 SHEET 3 B 4 ARG A 194 PRO A 206 -1 O PHE A 200 N PHE A 179 SHEET 4 B 4 PRO A 189 GLY A 191 -1 N LEU A 190 O ARG A 194 SHEET 1 C 6 THR A 173 VAL A 175 0 SHEET 2 C 6 SER A 178 PHE A 180 -1 O PHE A 180 N THR A 173 SHEET 3 C 6 ARG A 194 PRO A 206 -1 O PHE A 200 N PHE A 179 SHEET 4 C 6 MET A 211 TYR A 223 -1 O ASN A 214 N SER A 203 SHEET 5 C 6 TYR A 42 ASP A 46 -1 N PHE A 43 O LEU A 213 SHEET 6 C 6 LYS A 398 VAL A 399 -1 O LYS A 398 N ASP A 46 SHEET 1 D 5 VAL A 91 TYR A 92 0 SHEET 2 D 5 ASN A 97 THR A 100 -1 O TYR A 99 N VAL A 91 SHEET 3 D 5 ASP A 51 LYS A 60 -1 N TYR A 55 O ILE A 98 SHEET 4 D 5 ARG A 124 SER A 137 -1 O VAL A 136 N VAL A 52 SHEET 5 D 5 ARG A 110 THR A 116 -1 N ASP A 112 O VAL A 128 SHEET 1 E 5 THR A 335 PRO A 338 0 SHEET 2 E 5 PRO A 324 VAL A 328 -1 N LEU A 326 O LEU A 337 SHEET 3 E 5 LYS A 276 PRO A 286 -1 N ASN A 281 O GLN A 327 SHEET 4 E 5 LYS A 264 VAL A 267 -1 N VAL A 265 O TYR A 277 SHEET 5 E 5 CYS A 342 ILE A 344 -1 O ASN A 343 N GLU A 266 SHEET 1 F 2 THR A 291 GLN A 295 0 SHEET 2 F 2 THR A 301 THR A 305 -1 O VAL A 302 N LEU A 294 SHEET 1 G 3 ILE A 425 ALA A 426 0 SHEET 2 G 3 LEU A 416 GLN A 417 -1 N LEU A 416 O ALA A 426 SHEET 3 G 3 ILE A 575 LEU A 576 -1 O ILE A 575 N GLN A 417 SHEET 1 H 4 PHE A 489 TYR A 492 0 SHEET 2 H 4 TRP A 449 CYS A 453 1 N ILE A 451 O PHE A 489 SHEET 3 H 4 LEU A 515 LEU A 520 1 O ILE A 517 N ALA A 450 SHEET 4 H 4 THR A 542 GLN A 546 1 O VAL A 545 N LEU A 520 CISPEP 1 LYS A 60 PRO A 61 0 1.48 CISPEP 2 HIS A 619 PRO A 620 0 -9.05 CRYST1 70.390 97.730 72.700 90.00 110.89 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014207 0.000000 0.005422 0.00000 SCALE2 0.000000 0.010232 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014723 0.00000