HEADER HYDROLASE 29-MAY-13 4KYX TITLE CRYSTAL STRUCTURE OF ADP-RIBOSE PYROPHOSPHATASE MUTT FROM RICKETTSIA TITLE 2 FELIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSE PYROPHOSPHATASE MUTT; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.6.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICKETTSIA FELIS; SOURCE 3 ORGANISM_TAXID: 315456; SOURCE 4 STRAIN: ATCC VR-1525 / URRWXCAL2; SOURCE 5 GENE: MUTT, RF_0595; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: RIFEA.17522.A.B1 KEYWDS ADP-RIBOSE PYROPHOSPHATASE MUTT, MUTT, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 28-FEB-24 4KYX 1 SEQADV REVDAT 1 07-AUG-13 4KYX 0 JRNL AUTH J.ABENDROTH,M.C.CLIFTON,D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF ADP-RIBOSE PYROPHOSPHATASE MUTT FROM JRNL TITL 2 RICKETTSIA FELIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 24862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1291 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1775 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2180 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 227 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : -0.94000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.156 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.316 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2244 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2094 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3052 ; 1.612 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4803 ; 0.824 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 274 ; 6.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;36.145 ;25.259 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 368 ;12.348 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;14.677 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2580 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 538 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1093 ; 1.008 ; 0.895 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1092 ; 1.001 ; 0.893 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1362 ; 1.761 ; 1.331 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2090 31.7170 -0.2860 REMARK 3 T TENSOR REMARK 3 T11: 0.0162 T22: 0.0736 REMARK 3 T33: 0.3151 T12: -0.0021 REMARK 3 T13: -0.0028 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.5581 L22: 1.0590 REMARK 3 L33: 0.6547 L12: 0.2088 REMARK 3 L13: -0.0195 L23: -0.0371 REMARK 3 S TENSOR REMARK 3 S11: 0.0916 S12: -0.0859 S13: -0.0863 REMARK 3 S21: 0.0364 S22: -0.0626 S23: -0.0578 REMARK 3 S31: -0.0822 S32: 0.0257 S33: -0.0291 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2710 32.0640 -2.1400 REMARK 3 T TENSOR REMARK 3 T11: 0.0155 T22: 0.0843 REMARK 3 T33: 0.2806 T12: 0.0038 REMARK 3 T13: -0.0086 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 2.4777 L22: 0.8628 REMARK 3 L33: 0.4635 L12: -0.3236 REMARK 3 L13: -0.0076 L23: -0.0281 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: -0.0037 S13: -0.0526 REMARK 3 S21: 0.0044 S22: -0.0133 S23: -0.0110 REMARK 3 S31: -0.0146 S32: -0.0548 S33: -0.0107 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079969. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-13; 09-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5; 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; Y REMARK 200 RADIATION SOURCE : ROTATING ANODE; AUSTRALIAN REMARK 200 SYNCHROTRON REMARK 200 BEAMLINE : NULL; MX1 REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418; 0.95370 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX; DOUBLE SI WITH REMARK 200 SAGITTALY BENT SECOND CRYSTAL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+; ADSC QUANTUM REMARK 200 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26202 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.26100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG SCREEN, CONDITION H10: 25% PEG REMARK 280 3350, 200MM AMMONIUM ACETATE, 100MM BISTRIS PH 5.5; REMARK 280 RIFEA.17522.A.B1.PW36475 AT 28.18 MG/ML, TRAY 241401H10; CRYSTAL REMARK 280 INCUBATED IN 375MM NAI / 7.5% EG, AND 750MM NAI / 15% EG; THIS REMARK 280 CRYSTAL WAS USED FOR PHASING, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K. JCSG SCREEN, CONDITION A5: 20% PEG 3350, 200MM REMARK 280 MAGNESIUM FORMATE; RIFEA.17522.A.B1.PW36475 AT 28.18 MG/ML, TRAY REMARK 280 241401A5; CRYO: 10/20% EG; THIS CRYSTAL WAS USED FOR REFINEMENT, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.49000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.86000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.86000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.49000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASP A 141 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 SER B 27 REMARK 465 SER B 28 REMARK 465 HIS B 29 REMARK 465 GLY B 30 REMARK 465 GLU B 31 REMARK 465 SER B 32 REMARK 465 ASP B 141 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 2 CG1 CG2 CD1 REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 SER A 28 OG REMARK 470 HIS A 29 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 75 CG1 CG2 CD1 REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 ILE A 140 CG1 CG2 CD1 REMARK 470 MET B 1 CG SD CE REMARK 470 ILE B 2 CG1 CG2 CD1 REMARK 470 ILE B 26 CG1 CG2 CD1 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 GLU B 79 CG CD OE1 OE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 HIS B 104 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 137 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 119 O HOH A 226 2.18 REMARK 500 OD2 ASP A 74 O HOH A 290 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 94 50.04 -145.00 REMARK 500 GLU B 102 68.31 -114.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RIFEA.17522.A RELATED DB: TARGETTRACK DBREF 4KYX A 1 141 UNP Q4ULX7 Q4ULX7_RICFE 1 141 DBREF 4KYX B 1 141 UNP Q4ULX7 Q4ULX7_RICFE 1 141 SEQADV 4KYX MET A -7 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX ALA A -6 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A -5 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A -4 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A -3 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A -2 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A -1 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS A 0 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX MET B -7 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX ALA B -6 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B -5 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B -4 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B -3 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B -2 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B -1 UNP Q4ULX7 EXPRESSION TAG SEQADV 4KYX HIS B 0 UNP Q4ULX7 EXPRESSION TAG SEQRES 1 A 149 MET ALA HIS HIS HIS HIS HIS HIS MET ILE ASN HIS PRO SEQRES 2 A 149 ARG ILE GLY ILE GLY ILE LEU ILE PHE ASN ASN ARG ASN SEQRES 3 A 149 GLU ILE LEU LEU GLY LYS ARG ILE SER SER HIS GLY GLU SEQRES 4 A 149 SER SER TYR ALA PRO ALA GLY GLY HIS LEU GLU PHE GLY SEQRES 5 A 149 GLU THR PHE GLU GLU CYS ALA ILE ARG GLU VAL LEU GLU SEQRES 6 A 149 GLU THR ASN LEU ILE ILE GLU ASN PRO GLN PHE ILE ALA SEQRES 7 A 149 VAL THR ASN ASP ILE PHE GLU LYS GLU GLN LYS HIS TYR SEQRES 8 A 149 VAL SER ILE PHE LEU LYS ALA HIS CYS LEU ASN GLU HIS SEQRES 9 A 149 GLU LEU GLN ASN LEU GLU PRO HIS LYS VAL GLU ASN TRP SEQRES 10 A 149 GLN TRP PHE ALA LEU ASP ASN LEU PRO SER ASN LEU PHE SEQRES 11 A 149 LEU PRO LEU LYS ARG LEU ILE GLU LYS LYS CYS TYR LEU SEQRES 12 A 149 TYR LYS GLU ILE ILE ASP SEQRES 1 B 149 MET ALA HIS HIS HIS HIS HIS HIS MET ILE ASN HIS PRO SEQRES 2 B 149 ARG ILE GLY ILE GLY ILE LEU ILE PHE ASN ASN ARG ASN SEQRES 3 B 149 GLU ILE LEU LEU GLY LYS ARG ILE SER SER HIS GLY GLU SEQRES 4 B 149 SER SER TYR ALA PRO ALA GLY GLY HIS LEU GLU PHE GLY SEQRES 5 B 149 GLU THR PHE GLU GLU CYS ALA ILE ARG GLU VAL LEU GLU SEQRES 6 B 149 GLU THR ASN LEU ILE ILE GLU ASN PRO GLN PHE ILE ALA SEQRES 7 B 149 VAL THR ASN ASP ILE PHE GLU LYS GLU GLN LYS HIS TYR SEQRES 8 B 149 VAL SER ILE PHE LEU LYS ALA HIS CYS LEU ASN GLU HIS SEQRES 9 B 149 GLU LEU GLN ASN LEU GLU PRO HIS LYS VAL GLU ASN TRP SEQRES 10 B 149 GLN TRP PHE ALA LEU ASP ASN LEU PRO SER ASN LEU PHE SEQRES 11 B 149 LEU PRO LEU LYS ARG LEU ILE GLU LYS LYS CYS TYR LEU SEQRES 12 B 149 TYR LYS GLU ILE ILE ASP FORMUL 3 HOH *227(H2 O) HELIX 1 1 THR A 46 ASN A 60 1 15 HELIX 2 2 ASN A 94 LEU A 98 5 5 HELIX 3 3 PHE A 122 GLU A 130 1 9 HELIX 4 4 THR B 46 ASN B 60 1 15 HELIX 5 5 ASN B 94 LEU B 98 5 5 HELIX 6 6 PHE B 122 GLU B 130 1 9 SHEET 1 A 5 ALA A 37 HIS A 40 0 SHEET 2 A 5 ARG A 6 PHE A 14 -1 N ILE A 9 O GLY A 39 SHEET 3 A 5 LYS A 81 HIS A 91 1 O ILE A 86 N GLY A 10 SHEET 4 A 5 GLN A 67 PHE A 76 -1 N PHE A 76 O LYS A 81 SHEET 5 A 5 TYR A 134 LEU A 135 -1 O TYR A 134 N VAL A 71 SHEET 1 B 3 SER A 32 ALA A 35 0 SHEET 2 B 3 ILE A 20 ILE A 26 -1 N GLY A 23 O ALA A 35 SHEET 3 B 3 ASN A 108 PHE A 112 -1 O ASN A 108 N LYS A 24 SHEET 1 C 5 ALA B 37 HIS B 40 0 SHEET 2 C 5 ARG B 6 PHE B 14 -1 N ILE B 9 O GLY B 39 SHEET 3 C 5 LYS B 81 HIS B 91 1 O ALA B 90 N PHE B 14 SHEET 4 C 5 GLN B 67 PHE B 76 -1 N PHE B 76 O LYS B 81 SHEET 5 C 5 TYR B 134 LEU B 135 -1 O TYR B 134 N VAL B 71 SHEET 1 D 3 TYR B 34 ALA B 35 0 SHEET 2 D 3 ILE B 20 ARG B 25 -1 N GLY B 23 O ALA B 35 SHEET 3 D 3 VAL B 106 PHE B 112 -1 O PHE B 112 N ILE B 20 CRYST1 60.980 63.780 71.720 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016399 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015679 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013943 0.00000