HEADER TRANSFERASE 06-JUN-13 4L3L
TITLE CRYSTAL STRUCTURES OF HUMAN P70S6K1 KINASE DOMAIN (ZINC ANOMALOUS)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RPS6KB1 PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 88-375;
COMPND 5 SYNONYM: RIBOSOMAL PROTEIN S6 KINASE BETA-1, RIBOSOMAL PROTEIN S6
COMPND 6 KINASE, 70KDA, POLYPEPTIDE 1, ISOFORM CRA_C;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: RPS6KB1, HCG_1815774;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SPODOPTERA FRUGIPERDA;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBACHTB
KEYWDS PROTEIN KINASE, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.WANG,C.ZHONG,J.DING
REVDAT 4 08-NOV-23 4L3L 1 REMARK SEQADV LINK
REVDAT 3 15-NOV-17 4L3L 1 REMARK
REVDAT 2 04-SEP-13 4L3L 1 JRNL
REVDAT 1 24-JUL-13 4L3L 0
JRNL AUTH J.WANG,C.ZHONG,F.WANG,F.QU,J.DING
JRNL TITL CRYSTAL STRUCTURES OF S6K1 PROVIDE INSIGHTS INTO THE
JRNL TITL 2 REGULATION MECHANISM OF S6K1 BY THE HYDROPHOBIC MOTIF
JRNL REF BIOCHEM.J. V. 454 39 2013
JRNL REFN ISSN 0264-6021
JRNL PMID 23731517
JRNL DOI 10.1042/BJ20121863
REMARK 2
REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.7.0029
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.48
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8
REMARK 3 NUMBER OF REFLECTIONS : 20329
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.209
REMARK 3 R VALUE (WORKING SET) : 0.207
REMARK 3 FREE R VALUE : 0.247
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1033
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1411
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.96
REMARK 3 BIN R VALUE (WORKING SET) : 0.2030
REMARK 3 BIN FREE R VALUE SET COUNT : 79
REMARK 3 BIN FREE R VALUE : 0.2710
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2305
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 29
REMARK 3 SOLVENT ATOMS : 61
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.11
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.71000
REMARK 3 B22 (A**2) : -0.71000
REMARK 3 B33 (A**2) : 1.42000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): NULL
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.031
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2388 ; 0.009 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3221 ; 1.236 ; 1.988
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 290 ; 5.126 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;34.264 ;23.500
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ;16.826 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;22.223 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.085 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1771 ; 0.009 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2388 ; 9.326 ; 3.000
REMARK 3 SPHERICITY; FREE ATOMS (A**2): 35 ; 0.000 ; 5.000
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2403 ;19.468 ; 5.000
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 62 A 352
REMARK 3 ORIGIN FOR THE GROUP (A): -12.0547 20.0145 4.8641
REMARK 3 T TENSOR
REMARK 3 T11: 0.0755 T22: 0.0900
REMARK 3 T33: 0.0072 T12: -0.0026
REMARK 3 T13: 0.0015 T23: 0.0019
REMARK 3 L TENSOR
REMARK 3 L11: 0.1176 L22: 0.3563
REMARK 3 L33: 0.0238 L12: -0.0858
REMARK 3 L13: 0.0422 L23: -0.0111
REMARK 3 S TENSOR
REMARK 3 S11: -0.0061 S12: 0.0023 S13: 0.0262
REMARK 3 S21: 0.0144 S22: -0.0016 S23: -0.0373
REMARK 3 S31: -0.0180 S32: 0.0196 S33: 0.0077
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4L3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-13.
REMARK 100 THE DEPOSITION ID IS D_1000080137.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-MAY-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRF
REMARK 200 BEAMLINE : BL17U
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.2826
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : CCD ADSC UNSUPPORTED-Q315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20480
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3
REMARK 200 DATA REDUNDANCY : 8.900
REMARK 200 R MERGE (I) : 0.12100
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 9.40
REMARK 200 R MERGE FOR SHELL (I) : 0.43000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: 3A62
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 52.88
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5M SODIUM FORMATE, 0.1M HEPES, PH
REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.68900
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.70400
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.70400
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.84450
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.70400
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.70400
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 107.53350
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.70400
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.70400
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.84450
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.70400
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.70400
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.53350
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 71.68900
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: BIOLOGICAL UNIT IS MONOMER
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 49
REMARK 465 ALA A 50
REMARK 465 MET A 51
REMARK 465 SER A 52
REMARK 465 GLU A 53
REMARK 465 THR A 54
REMARK 465 SER A 55
REMARK 465 VAL A 56
REMARK 465 ASN A 57
REMARK 465 ARG A 58
REMARK 465 GLY A 59
REMARK 465 PRO A 60
REMARK 465 GLU A 61
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 277 CG CD CE NZ
REMARK 470 GLU A 343 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 NH1 ARG A 298 O HOH A 561 2.15
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 THR A 141 -162.88 -117.70
REMARK 500 ARG A 194 -56.35 83.64
REMARK 500 ASN A 248 -158.16 -148.56
REMARK 500 ASP A 319 -127.80 45.25
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A 402 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 CYS A 217 SG
REMARK 620 2 HIS A 222 ND1 102.8
REMARK 620 3 HIS A 228 ND1 109.1 122.3
REMARK 620 4 CYS A 231 SG 109.6 104.2 108.4
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5FI A 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4L3J RELATED DB: PDB
REMARK 900 RELATED ID: 4L42 RELATED DB: PDB
REMARK 900 RELATED ID: 4L43 RELATED DB: PDB
REMARK 900 RELATED ID: 4L44 RELATED DB: PDB
REMARK 900 RELATED ID: 4L45 RELATED DB: PDB
REMARK 900 RELATED ID: 4L46 RELATED DB: PDB
DBREF 4L3L A 52 352 UNP Q7Z721 Q7Z721_HUMAN 75 375
SEQADV 4L3L GLY A 49 UNP Q7Z721 EXPRESSION TAG
SEQADV 4L3L ALA A 50 UNP Q7Z721 EXPRESSION TAG
SEQADV 4L3L MET A 51 UNP Q7Z721 EXPRESSION TAG
SEQRES 1 A 304 GLY ALA MET SER GLU THR SER VAL ASN ARG GLY PRO GLU
SEQRES 2 A 304 LYS ILE ARG PRO GLU CYS PHE GLU LEU LEU ARG VAL LEU
SEQRES 3 A 304 GLY LYS GLY GLY TYR GLY LYS VAL PHE GLN VAL ARG LYS
SEQRES 4 A 304 VAL THR GLY ALA ASN THR GLY LYS ILE PHE ALA MET LYS
SEQRES 5 A 304 VAL LEU LYS LYS ALA MET ILE VAL ARG ASN ALA LYS ASP
SEQRES 6 A 304 THR ALA HIS THR LYS ALA GLU ARG ASN ILE LEU GLU GLU
SEQRES 7 A 304 VAL LYS HIS PRO PHE ILE VAL ASP LEU ILE TYR ALA PHE
SEQRES 8 A 304 GLN THR GLY GLY LYS LEU TYR LEU ILE LEU GLU TYR LEU
SEQRES 9 A 304 SER GLY GLY GLU LEU PHE MET GLN LEU GLU ARG GLU GLY
SEQRES 10 A 304 ILE PHE MET GLU ASP THR ALA CYS PHE TYR LEU ALA GLU
SEQRES 11 A 304 ILE SER MET ALA LEU GLY HIS LEU HIS GLN LYS GLY ILE
SEQRES 12 A 304 ILE TYR ARG ASP LEU LYS PRO GLU ASN ILE MET LEU ASN
SEQRES 13 A 304 HIS GLN GLY HIS VAL LYS LEU THR ASP PHE GLY LEU CYS
SEQRES 14 A 304 LYS GLU SER ILE HIS ASP GLY THR VAL THR HIS THR PHE
SEQRES 15 A 304 CYS GLY THR ILE GLU TYR MET ALA PRO GLU ILE LEU MET
SEQRES 16 A 304 ARG SER GLY HIS ASN ARG ALA VAL ASP TRP TRP SER LEU
SEQRES 17 A 304 GLY ALA LEU MET TYR ASP MET LEU THR GLY ALA PRO PRO
SEQRES 18 A 304 PHE THR GLY GLU ASN ARG LYS LYS THR ILE ASP LYS ILE
SEQRES 19 A 304 LEU LYS CYS LYS LEU ASN LEU PRO PRO TYR LEU THR GLN
SEQRES 20 A 304 GLU ALA ARG ASP LEU LEU LYS LYS LEU LEU LYS ARG ASN
SEQRES 21 A 304 ALA ALA SER ARG LEU GLY ALA GLY PRO GLY ASP ALA GLY
SEQRES 22 A 304 GLU VAL GLN ALA HIS PRO PHE PHE ARG HIS ILE ASN TRP
SEQRES 23 A 304 GLU GLU LEU LEU ALA ARG LYS VAL GLU PRO PRO PHE LYS
SEQRES 24 A 304 PRO LEU LEU GLN SER
HET 5FI A 401 28
HET ZN A 402 1
HETNAM 5FI 2-{[4-(5-ETHYLPYRIMIDIN-4-YL)PIPERAZIN-1-YL]METHYL}-5-
HETNAM 2 5FI (TRIFLUOROMETHYL)-1H-BENZIMIDAZOLE
HETNAM ZN ZINC ION
FORMUL 2 5FI C19 H21 F3 N6
FORMUL 3 ZN ZN 2+
FORMUL 4 HOH *61(H2 O)
HELIX 1 1 ARG A 64 GLU A 66 5 3
HELIX 2 2 LYS A 104 ASN A 110 1 7
HELIX 3 3 ASN A 110 VAL A 127 1 18
HELIX 4 4 GLU A 156 GLY A 165 1 10
HELIX 5 5 MET A 168 LYS A 189 1 22
HELIX 6 6 LYS A 197 GLU A 199 5 3
HELIX 7 7 ALA A 238 ARG A 244 1 7
HELIX 8 8 ARG A 249 GLY A 266 1 18
HELIX 9 9 ASN A 274 CYS A 285 1 12
HELIX 10 10 THR A 294 LEU A 305 1 12
HELIX 11 11 ASN A 308 ARG A 312 5 5
HELIX 12 12 GLY A 318 ALA A 325 1 8
HELIX 13 13 HIS A 326 ARG A 330 5 5
HELIX 14 14 ASN A 333 ALA A 339 1 7
HELIX 15 15 LYS A 347 GLN A 351 5 5
SHEET 1 A 5 PHE A 68 GLY A 77 0
SHEET 2 A 5 GLY A 80 LYS A 87 -1 O VAL A 82 N LEU A 74
SHEET 3 A 5 ILE A 96 LYS A 103 -1 O MET A 99 N PHE A 83
SHEET 4 A 5 LYS A 144 GLU A 150 -1 O LEU A 149 N ALA A 98
SHEET 5 A 5 LEU A 135 GLN A 140 -1 N ILE A 136 O ILE A 148
SHEET 1 B 2 ILE A 201 LEU A 203 0
SHEET 2 B 2 VAL A 209 LEU A 211 -1 O LYS A 210 N MET A 202
LINK SG CYS A 217 ZN ZN A 402 1555 1555 2.58
LINK ND1 HIS A 222 ZN ZN A 402 1555 1555 2.57
LINK ND1 HIS A 228 ZN ZN A 402 1555 1555 2.48
LINK SG CYS A 231 ZN ZN A 402 1555 1555 2.58
SITE 1 AC1 14 GLY A 75 LYS A 76 GLY A 77 TYR A 79
SITE 2 AC1 14 GLY A 80 LYS A 81 ALA A 98 LYS A 100
SITE 3 AC1 14 LEU A 102 GLU A 150 LEU A 152 MET A 202
SITE 4 AC1 14 LYS A 218 HOH A 518
SITE 1 AC2 4 CYS A 217 HIS A 222 HIS A 228 CYS A 231
CRYST1 69.408 69.408 143.378 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014408 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014408 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006975 0.00000