HEADER TRANSCRIPTION/INHIBITOR 13-JUN-13 4L7C TITLE STRUCTURE OF KEAP1 KELCH DOMAIN WITH 2-{[(1S)-2-{[(1R,2S)-2-(1H- TITLE 2 TETRAZOL-5-YL)CYCLOHEXYL]CARBONYL}-1,2,3,4-TETRAHYDROISOQUINOLIN-1- TITLE 3 YL]METHYL}-1H-ISOINDOLE-1,3(2H)-DIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH-LIKE ECH-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: KELCH DOMAIN, UNP RESIDUES 321-609; COMPND 5 SYNONYM: CYTOSOLIC INHIBITOR OF NRF2, INRF2, KELCH-LIKE PROTEIN 19; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KEAP1, INRF2, KIAA0132, KLHL19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS STRESS SENSOR, KELCH DOMAIN, KELCH REPEAT MOTIF, BETA-PROPELLER, KEYWDS 2 NRF2, PROTEIN-SMALL MOLECULE COMPLEX, TRANSCRIPTION-INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.JNOFF,F.BROOKFIELD,C.ALBRECHT,J.J.BARKER,O.BARKER,E.BEAUMONT, AUTHOR 2 S.BROMIDGE,M.BROOKS,T.CESKA,J.P.COURADE,T.CRABBE,S.DUCLOS,T.FRYATT, AUTHOR 3 E.JIGOREL,J.KWONG,Z.SANDS,M.A.SMITH REVDAT 4 30-OCT-24 4L7C 1 REMARK REVDAT 3 20-SEP-23 4L7C 1 REMARK SEQADV REVDAT 2 23-APR-14 4L7C 1 JRNL REVDAT 1 19-FEB-14 4L7C 0 JRNL AUTH E.JNOFF,C.ALBRECHT,J.J.BARKER,O.BARKER,E.BEAUMONT, JRNL AUTH 2 S.BROMIDGE,F.BROOKFIELD,M.BROOKS,C.BUBERT,T.CESKA,V.CORDEN, JRNL AUTH 3 G.DAWSON,S.DUCLOS,T.FRYATT,C.GENICOT,E.JIGOREL,J.KWONG, JRNL AUTH 4 R.MAGHAMES,I.MUSHI,R.PIKE,Z.A.SANDS,M.A.SMITH,C.C.STIMSON, JRNL AUTH 5 J.P.COURADE JRNL TITL BINDING MODE AND STRUCTURE-ACTIVITY RELATIONSHIPS AROUND JRNL TITL 2 DIRECT INHIBITORS OF THE NRF2-KEAP1 COMPLEX. JRNL REF CHEMMEDCHEM V. 9 699 2014 JRNL REFN ISSN 1860-7179 JRNL PMID 24504667 JRNL DOI 10.1002/CMDC.201300525 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2573 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3519 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6609 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 125 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.385 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.262 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.881 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.902 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.886 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7004 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6301 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9559 ; 0.956 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14416 ; 0.643 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 875 ; 5.286 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 335 ;29.935 ;22.776 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1020 ;13.628 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 67 ;14.905 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 999 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8341 ; 0.002 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1767 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4L7C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48009 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 36.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ZGK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL OF PROTEIN AT 12 MG/ML IN 20 MM REMARK 280 TRIS-HCL PH 7.5, 5 MM DTT, 5 MM COMPOUND 1 + 2 UL OF 2.15 M REMARK 280 SODIUM ACETATE , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K, REMARK 280 PH 4.6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.14500 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.31500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.14500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.31500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 318 REMARK 465 GLY A 319 REMARK 465 HIS A 320 REMARK 465 ALA A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 VAL A 324 REMARK 465 GLY A 325 REMARK 465 HIS A 612 REMARK 465 HIS A 613 REMARK 465 HIS A 614 REMARK 465 HIS A 615 REMARK 465 HIS A 616 REMARK 465 HIS A 617 REMARK 465 MET B 318 REMARK 465 GLY B 319 REMARK 465 HIS B 320 REMARK 465 ALA B 321 REMARK 465 PRO B 322 REMARK 465 LYS B 323 REMARK 465 VAL B 324 REMARK 465 GLY B 325 REMARK 465 HIS B 612 REMARK 465 HIS B 613 REMARK 465 HIS B 614 REMARK 465 HIS B 615 REMARK 465 HIS B 616 REMARK 465 HIS B 617 REMARK 465 MET C 318 REMARK 465 GLY C 319 REMARK 465 HIS C 320 REMARK 465 ALA C 321 REMARK 465 PRO C 322 REMARK 465 LYS C 323 REMARK 465 VAL C 324 REMARK 465 GLY C 325 REMARK 465 HIS C 612 REMARK 465 HIS C 613 REMARK 465 HIS C 614 REMARK 465 HIS C 615 REMARK 465 HIS C 616 REMARK 465 HIS C 617 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 336 -50.20 75.75 REMARK 500 VAL A 453 -158.62 -113.64 REMARK 500 THR A 481 -56.66 -139.21 REMARK 500 GLN A 528 -53.05 -120.11 REMARK 500 HIS A 575 -32.15 -154.25 REMARK 500 ARG B 336 -50.18 75.59 REMARK 500 THR B 481 -50.85 -137.33 REMARK 500 ILE B 500 -168.72 -108.52 REMARK 500 HIS B 516 -127.63 56.33 REMARK 500 GLN B 528 -21.02 -142.93 REMARK 500 VAL B 547 -168.91 -125.63 REMARK 500 HIS B 575 -83.80 -165.63 REMARK 500 ARG C 336 -35.59 68.92 REMARK 500 GLN C 528 -58.47 -122.14 REMARK 500 VAL C 547 -168.35 -119.37 REMARK 500 HIS C 575 -48.34 -165.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1VW A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1VW B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1VW C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L7C RELATED DB: PDB REMARK 900 RELATED ID: 4L7D RELATED DB: PDB REMARK 900 RELATED ID: 4N1B RELATED DB: PDB DBREF 4L7C A 321 609 UNP Q14145 KEAP1_HUMAN 321 609 DBREF 4L7C B 321 609 UNP Q14145 KEAP1_HUMAN 321 609 DBREF 4L7C C 321 609 UNP Q14145 KEAP1_HUMAN 321 609 SEQADV 4L7C MET A 318 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLY A 319 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 320 UNP Q14145 EXPRESSION TAG SEQADV 4L7C ASP A 354 UNP Q14145 ARG 354 ENGINEERED MUTATION SEQADV 4L7C LEU A 610 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLU A 611 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 612 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 613 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 614 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 615 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 616 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS A 617 UNP Q14145 EXPRESSION TAG SEQADV 4L7C MET B 318 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLY B 319 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 320 UNP Q14145 EXPRESSION TAG SEQADV 4L7C ASP B 354 UNP Q14145 ARG 354 ENGINEERED MUTATION SEQADV 4L7C LEU B 610 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLU B 611 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 612 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 613 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 614 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 615 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 616 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS B 617 UNP Q14145 EXPRESSION TAG SEQADV 4L7C MET C 318 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLY C 319 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 320 UNP Q14145 EXPRESSION TAG SEQADV 4L7C ASP C 354 UNP Q14145 ARG 354 ENGINEERED MUTATION SEQADV 4L7C LEU C 610 UNP Q14145 EXPRESSION TAG SEQADV 4L7C GLU C 611 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 612 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 613 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 614 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 615 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 616 UNP Q14145 EXPRESSION TAG SEQADV 4L7C HIS C 617 UNP Q14145 EXPRESSION TAG SEQRES 1 A 300 MET GLY HIS ALA PRO LYS VAL GLY ARG LEU ILE TYR THR SEQRES 2 A 300 ALA GLY GLY TYR PHE ARG GLN SER LEU SER TYR LEU GLU SEQRES 3 A 300 ALA TYR ASN PRO SER ASP GLY THR TRP LEU ASP LEU ALA SEQRES 4 A 300 ASP LEU GLN VAL PRO ARG SER GLY LEU ALA GLY CYS VAL SEQRES 5 A 300 VAL GLY GLY LEU LEU TYR ALA VAL GLY GLY ARG ASN ASN SEQRES 6 A 300 SER PRO ASP GLY ASN THR ASP SER SER ALA LEU ASP CYS SEQRES 7 A 300 TYR ASN PRO MET THR ASN GLN TRP SER PRO CYS ALA PRO SEQRES 8 A 300 MET SER VAL PRO ARG ASN ARG ILE GLY VAL GLY VAL ILE SEQRES 9 A 300 ASP GLY HIS ILE TYR ALA VAL GLY GLY SER HIS GLY CYS SEQRES 10 A 300 ILE HIS HIS ASN SER VAL GLU ARG TYR GLU PRO GLU ARG SEQRES 11 A 300 ASP GLU TRP HIS LEU VAL ALA PRO MET LEU THR ARG ARG SEQRES 12 A 300 ILE GLY VAL GLY VAL ALA VAL LEU ASN ARG LEU LEU TYR SEQRES 13 A 300 ALA VAL GLY GLY PHE ASP GLY THR ASN ARG LEU ASN SER SEQRES 14 A 300 ALA GLU CYS TYR TYR PRO GLU ARG ASN GLU TRP ARG MET SEQRES 15 A 300 ILE THR ALA MET ASN THR ILE ARG SER GLY ALA GLY VAL SEQRES 16 A 300 CYS VAL LEU HIS ASN CYS ILE TYR ALA ALA GLY GLY TYR SEQRES 17 A 300 ASP GLY GLN ASP GLN LEU ASN SER VAL GLU ARG TYR ASP SEQRES 18 A 300 VAL GLU THR GLU THR TRP THR PHE VAL ALA PRO MET LYS SEQRES 19 A 300 HIS ARG ARG SER ALA LEU GLY ILE THR VAL HIS GLN GLY SEQRES 20 A 300 ARG ILE TYR VAL LEU GLY GLY TYR ASP GLY HIS THR PHE SEQRES 21 A 300 LEU ASP SER VAL GLU CYS TYR ASP PRO ASP THR ASP THR SEQRES 22 A 300 TRP SER GLU VAL THR ARG MET THR SER GLY ARG SER GLY SEQRES 23 A 300 VAL GLY VAL ALA VAL THR LEU GLU HIS HIS HIS HIS HIS SEQRES 24 A 300 HIS SEQRES 1 B 300 MET GLY HIS ALA PRO LYS VAL GLY ARG LEU ILE TYR THR SEQRES 2 B 300 ALA GLY GLY TYR PHE ARG GLN SER LEU SER TYR LEU GLU SEQRES 3 B 300 ALA TYR ASN PRO SER ASP GLY THR TRP LEU ASP LEU ALA SEQRES 4 B 300 ASP LEU GLN VAL PRO ARG SER GLY LEU ALA GLY CYS VAL SEQRES 5 B 300 VAL GLY GLY LEU LEU TYR ALA VAL GLY GLY ARG ASN ASN SEQRES 6 B 300 SER PRO ASP GLY ASN THR ASP SER SER ALA LEU ASP CYS SEQRES 7 B 300 TYR ASN PRO MET THR ASN GLN TRP SER PRO CYS ALA PRO SEQRES 8 B 300 MET SER VAL PRO ARG ASN ARG ILE GLY VAL GLY VAL ILE SEQRES 9 B 300 ASP GLY HIS ILE TYR ALA VAL GLY GLY SER HIS GLY CYS SEQRES 10 B 300 ILE HIS HIS ASN SER VAL GLU ARG TYR GLU PRO GLU ARG SEQRES 11 B 300 ASP GLU TRP HIS LEU VAL ALA PRO MET LEU THR ARG ARG SEQRES 12 B 300 ILE GLY VAL GLY VAL ALA VAL LEU ASN ARG LEU LEU TYR SEQRES 13 B 300 ALA VAL GLY GLY PHE ASP GLY THR ASN ARG LEU ASN SER SEQRES 14 B 300 ALA GLU CYS TYR TYR PRO GLU ARG ASN GLU TRP ARG MET SEQRES 15 B 300 ILE THR ALA MET ASN THR ILE ARG SER GLY ALA GLY VAL SEQRES 16 B 300 CYS VAL LEU HIS ASN CYS ILE TYR ALA ALA GLY GLY TYR SEQRES 17 B 300 ASP GLY GLN ASP GLN LEU ASN SER VAL GLU ARG TYR ASP SEQRES 18 B 300 VAL GLU THR GLU THR TRP THR PHE VAL ALA PRO MET LYS SEQRES 19 B 300 HIS ARG ARG SER ALA LEU GLY ILE THR VAL HIS GLN GLY SEQRES 20 B 300 ARG ILE TYR VAL LEU GLY GLY TYR ASP GLY HIS THR PHE SEQRES 21 B 300 LEU ASP SER VAL GLU CYS TYR ASP PRO ASP THR ASP THR SEQRES 22 B 300 TRP SER GLU VAL THR ARG MET THR SER GLY ARG SER GLY SEQRES 23 B 300 VAL GLY VAL ALA VAL THR LEU GLU HIS HIS HIS HIS HIS SEQRES 24 B 300 HIS SEQRES 1 C 300 MET GLY HIS ALA PRO LYS VAL GLY ARG LEU ILE TYR THR SEQRES 2 C 300 ALA GLY GLY TYR PHE ARG GLN SER LEU SER TYR LEU GLU SEQRES 3 C 300 ALA TYR ASN PRO SER ASP GLY THR TRP LEU ASP LEU ALA SEQRES 4 C 300 ASP LEU GLN VAL PRO ARG SER GLY LEU ALA GLY CYS VAL SEQRES 5 C 300 VAL GLY GLY LEU LEU TYR ALA VAL GLY GLY ARG ASN ASN SEQRES 6 C 300 SER PRO ASP GLY ASN THR ASP SER SER ALA LEU ASP CYS SEQRES 7 C 300 TYR ASN PRO MET THR ASN GLN TRP SER PRO CYS ALA PRO SEQRES 8 C 300 MET SER VAL PRO ARG ASN ARG ILE GLY VAL GLY VAL ILE SEQRES 9 C 300 ASP GLY HIS ILE TYR ALA VAL GLY GLY SER HIS GLY CYS SEQRES 10 C 300 ILE HIS HIS ASN SER VAL GLU ARG TYR GLU PRO GLU ARG SEQRES 11 C 300 ASP GLU TRP HIS LEU VAL ALA PRO MET LEU THR ARG ARG SEQRES 12 C 300 ILE GLY VAL GLY VAL ALA VAL LEU ASN ARG LEU LEU TYR SEQRES 13 C 300 ALA VAL GLY GLY PHE ASP GLY THR ASN ARG LEU ASN SER SEQRES 14 C 300 ALA GLU CYS TYR TYR PRO GLU ARG ASN GLU TRP ARG MET SEQRES 15 C 300 ILE THR ALA MET ASN THR ILE ARG SER GLY ALA GLY VAL SEQRES 16 C 300 CYS VAL LEU HIS ASN CYS ILE TYR ALA ALA GLY GLY TYR SEQRES 17 C 300 ASP GLY GLN ASP GLN LEU ASN SER VAL GLU ARG TYR ASP SEQRES 18 C 300 VAL GLU THR GLU THR TRP THR PHE VAL ALA PRO MET LYS SEQRES 19 C 300 HIS ARG ARG SER ALA LEU GLY ILE THR VAL HIS GLN GLY SEQRES 20 C 300 ARG ILE TYR VAL LEU GLY GLY TYR ASP GLY HIS THR PHE SEQRES 21 C 300 LEU ASP SER VAL GLU CYS TYR ASP PRO ASP THR ASP THR SEQRES 22 C 300 TRP SER GLU VAL THR ARG MET THR SER GLY ARG SER GLY SEQRES 23 C 300 VAL GLY VAL ALA VAL THR LEU GLU HIS HIS HIS HIS HIS SEQRES 24 C 300 HIS HET 1VW A 701 35 HET ACT A 702 4 HET 1VW B 701 35 HET ACT B 702 4 HET ACT B 703 4 HET 1VW C 701 35 HET ACT C 702 4 HET ACT C 703 4 HETNAM 1VW 2-{[(1S)-2-{[(1R,2S)-2-(1H-TETRAZOL-5-YL) HETNAM 2 1VW CYCLOHEXYL]CARBONYL}-1,2,3,4-TETRAHYDROISOQUINOLIN-1- HETNAM 3 1VW YL]METHYL}-1H-ISOINDOLE-1,3(2H)-DIONE HETNAM ACT ACETATE ION FORMUL 4 1VW 3(C26 H26 N6 O3) FORMUL 5 ACT 5(C2 H3 O2 1-) FORMUL 12 HOH *199(H2 O) SHEET 1 A 4 THR A 351 LEU A 355 0 SHEET 2 A 4 LEU A 342 ASN A 346 -1 N ALA A 344 O LEU A 353 SHEET 3 A 4 ILE A 328 ALA A 331 -1 N ILE A 328 O TYR A 345 SHEET 4 A 4 GLY A 605 VAL A 608 -1 O GLY A 605 N ALA A 331 SHEET 1 B 4 ALA A 366 VAL A 370 0 SHEET 2 B 4 LEU A 373 VAL A 377 -1 O TYR A 375 N CYS A 368 SHEET 3 B 4 LEU A 393 ASN A 397 -1 O TYR A 396 N LEU A 374 SHEET 4 B 4 GLN A 402 PRO A 405 -1 O SER A 404 N CYS A 395 SHEET 1 C 2 ARG A 380 ASN A 382 0 SHEET 2 C 2 ASN A 387 ASP A 389 -1 O THR A 388 N ASN A 381 SHEET 1 D 4 GLY A 417 ILE A 421 0 SHEET 2 D 4 HIS A 424 VAL A 428 -1 O VAL A 428 N GLY A 417 SHEET 3 D 4 VAL A 440 GLU A 444 -1 O GLU A 441 N ALA A 427 SHEET 4 D 4 GLU A 449 LEU A 452 -1 O HIS A 451 N ARG A 442 SHEET 1 E 2 SER A 431 HIS A 432 0 SHEET 2 E 2 ILE A 435 HIS A 436 -1 O ILE A 435 N HIS A 432 SHEET 1 F 4 GLY A 464 LEU A 468 0 SHEET 2 F 4 LEU A 471 VAL A 475 -1 O VAL A 475 N GLY A 464 SHEET 3 F 4 ALA A 487 TYR A 491 -1 O TYR A 490 N LEU A 472 SHEET 4 F 4 GLU A 496 MET A 499 -1 O ARG A 498 N CYS A 489 SHEET 1 G 4 GLY A 511 LEU A 515 0 SHEET 2 G 4 CYS A 518 ALA A 522 -1 O ALA A 522 N GLY A 511 SHEET 3 G 4 VAL A 534 ASP A 538 -1 O TYR A 537 N ILE A 519 SHEET 4 G 4 THR A 543 VAL A 547 -1 O VAL A 547 N VAL A 534 SHEET 1 H 4 GLY A 558 VAL A 561 0 SHEET 2 H 4 ILE A 566 TYR A 572 -1 O TYR A 567 N THR A 560 SHEET 3 H 4 PHE A 577 ASP A 585 -1 O LEU A 578 N GLY A 571 SHEET 4 H 4 THR A 590 ARG A 596 -1 O SER A 592 N CYS A 583 SHEET 1 I 4 THR B 351 ASP B 354 0 SHEET 2 I 4 LEU B 342 ASN B 346 -1 N ALA B 344 O LEU B 353 SHEET 3 I 4 ILE B 328 ALA B 331 -1 N ILE B 328 O TYR B 345 SHEET 4 I 4 GLY B 605 VAL B 608 -1 O GLY B 605 N ALA B 331 SHEET 1 J 4 ALA B 366 VAL B 370 0 SHEET 2 J 4 LEU B 373 VAL B 377 -1 O TYR B 375 N CYS B 368 SHEET 3 J 4 LEU B 393 ASN B 397 -1 O TYR B 396 N LEU B 374 SHEET 4 J 4 GLN B 402 PRO B 405 -1 O SER B 404 N CYS B 395 SHEET 1 K 2 ARG B 380 ASN B 382 0 SHEET 2 K 2 ASN B 387 ASP B 389 -1 O THR B 388 N ASN B 381 SHEET 1 L 4 GLY B 417 ILE B 421 0 SHEET 2 L 4 HIS B 424 VAL B 428 -1 O TYR B 426 N GLY B 419 SHEET 3 L 4 VAL B 440 GLU B 444 -1 O GLU B 441 N ALA B 427 SHEET 4 L 4 GLU B 449 VAL B 453 -1 O HIS B 451 N ARG B 442 SHEET 1 M 2 SER B 431 HIS B 432 0 SHEET 2 M 2 ILE B 435 HIS B 436 -1 O ILE B 435 N HIS B 432 SHEET 1 N 4 GLY B 464 LEU B 468 0 SHEET 2 N 4 LEU B 471 PHE B 478 -1 O VAL B 475 N GLY B 464 SHEET 3 N 4 ARG B 483 TYR B 491 -1 O TYR B 490 N LEU B 472 SHEET 4 N 4 GLU B 496 MET B 499 -1 O ARG B 498 N CYS B 489 SHEET 1 O 4 GLY B 511 LEU B 515 0 SHEET 2 O 4 CYS B 518 ALA B 522 -1 O TYR B 520 N CYS B 513 SHEET 3 O 4 VAL B 534 ASP B 538 -1 O TYR B 537 N ILE B 519 SHEET 4 O 4 THR B 543 PHE B 546 -1 O THR B 545 N ARG B 536 SHEET 1 P 4 GLY B 558 VAL B 561 0 SHEET 2 P 4 ILE B 566 TYR B 572 -1 O TYR B 567 N THR B 560 SHEET 3 P 4 PHE B 577 ASP B 585 -1 O TYR B 584 N ILE B 566 SHEET 4 P 4 THR B 590 ARG B 596 -1 O SER B 592 N CYS B 583 SHEET 1 Q 4 THR C 351 ASP C 354 0 SHEET 2 Q 4 LEU C 342 ASN C 346 -1 N ALA C 344 O LEU C 353 SHEET 3 Q 4 ILE C 328 ALA C 331 -1 N ILE C 328 O TYR C 345 SHEET 4 Q 4 GLY C 605 VAL C 608 -1 O GLY C 605 N ALA C 331 SHEET 1 R 4 ALA C 366 VAL C 370 0 SHEET 2 R 4 LEU C 373 VAL C 377 -1 O TYR C 375 N CYS C 368 SHEET 3 R 4 LEU C 393 ASN C 397 -1 O TYR C 396 N LEU C 374 SHEET 4 R 4 GLN C 402 PRO C 405 -1 O SER C 404 N CYS C 395 SHEET 1 S 2 ARG C 380 SER C 383 0 SHEET 2 S 2 GLY C 386 ASP C 389 -1 O THR C 388 N ASN C 381 SHEET 1 T 4 GLY C 417 ILE C 421 0 SHEET 2 T 4 HIS C 424 VAL C 428 -1 O TYR C 426 N GLY C 419 SHEET 3 T 4 VAL C 440 GLU C 444 -1 O GLU C 441 N ALA C 427 SHEET 4 T 4 GLU C 449 LEU C 452 -1 O HIS C 451 N ARG C 442 SHEET 1 U 2 SER C 431 HIS C 432 0 SHEET 2 U 2 ILE C 435 HIS C 436 -1 O ILE C 435 N HIS C 432 SHEET 1 V 4 GLY C 464 LEU C 468 0 SHEET 2 V 4 LEU C 471 PHE C 478 -1 O VAL C 475 N GLY C 464 SHEET 3 V 4 ARG C 483 TYR C 491 -1 O TYR C 490 N LEU C 472 SHEET 4 V 4 GLU C 496 MET C 499 -1 O ARG C 498 N CYS C 489 SHEET 1 W 4 GLY C 511 LEU C 515 0 SHEET 2 W 4 CYS C 518 ALA C 522 -1 O TYR C 520 N CYS C 513 SHEET 3 W 4 VAL C 534 ASP C 538 -1 O TYR C 537 N ILE C 519 SHEET 4 W 4 THR C 543 VAL C 547 -1 O VAL C 547 N VAL C 534 SHEET 1 X 4 GLY C 558 VAL C 561 0 SHEET 2 X 4 ILE C 566 TYR C 572 -1 O TYR C 567 N THR C 560 SHEET 3 X 4 PHE C 577 ASP C 585 -1 O TYR C 584 N ILE C 566 SHEET 4 X 4 THR C 590 ARG C 596 -1 O SER C 592 N CYS C 583 SSBOND 1 CYS A 434 CYS C 434 1555 1555 2.03 SSBOND 2 CYS B 434 CYS B 434 1555 2455 2.91 SITE 1 AC1 12 TYR A 334 ARG A 380 ASN A 382 ASN A 414 SITE 2 AC1 12 ARG A 415 ALA A 556 TYR A 572 SER A 602 SITE 3 AC1 12 ACT A 702 HOH A 803 HOH A 825 HOH A 834 SITE 1 AC2 4 TYR A 525 GLN A 530 SER A 555 1VW A 701 SITE 1 AC3 11 TYR B 334 ARG B 380 ASN B 382 ASN B 414 SITE 2 AC3 11 ARG B 415 ALA B 556 TYR B 572 SER B 602 SITE 3 AC3 11 ACT B 702 HOH B 801 HOH B 803 SITE 1 AC4 4 TYR B 525 GLN B 530 SER B 555 1VW B 701 SITE 1 AC5 3 PHE B 478 ARG B 483 SER B 508 SITE 1 AC6 12 TYR C 334 ARG C 380 ASN C 382 ASN C 414 SITE 2 AC6 12 ARG C 415 ALA C 556 TYR C 572 SER C 602 SITE 3 AC6 12 ACT C 702 HOH C 801 HOH C 834 HOH C 879 SITE 1 AC7 4 TYR C 525 GLN C 530 SER C 555 1VW C 701 SITE 1 AC8 2 ARG C 483 SER C 508 CRYST1 76.290 125.610 132.630 90.00 90.00 90.00 P 21 2 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013108 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007961 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007540 0.00000