HEADER ISOMERASE 20-JUN-13 4LAW TITLE CRYSTAL STRUCTURE ANALYSIS OF FKBP52, CRYSTAL FORM III COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 16-260; COMPND 5 SYNONYM: PPIASE FKBP4, 52 KDA FK506-BINDING PROTEIN, 52 KDA FKBP, COMPND 6 FKBP-52, 59 KDA IMMUNOPHILIN, P59, FK506-BINDING PROTEIN 4, FKBP-4, COMPND 7 FKBP59, HSP-BINDING IMMUNOPHILIN, HBI, IMMUNOPHILIN FKBP52, ROTAMASE; COMPND 8 EC: 5.2.1.8; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FKBP4, FKBP52; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON+ RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX-HTB KEYWDS FK-506 BINDING DOMAIN, HSP90 COCHAPERONE, IMMUNOPHILIN, PEPTIDYL- KEYWDS 2 PROLYL ISOMERASE, PROTEIN FOLDING, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BRACHER,C.KOZANY,A.HAEHLE,P.WILD,M.ZACHARIAS,F.HAUSCH REVDAT 4 20-SEP-23 4LAW 1 REMARK SEQADV REVDAT 3 13-NOV-13 4LAW 1 JRNL REVDAT 2 28-AUG-13 4LAW 1 JRNL REVDAT 1 21-AUG-13 4LAW 0 JRNL AUTH A.BRACHER,C.KOZANY,A.HAHLE,P.WILD,M.ZACHARIAS,F.HAUSCH JRNL TITL CRYSTAL STRUCTURES OF THE FREE AND LIGAND-BOUND FK1-FK2 JRNL TITL 2 DOMAIN SEGMENT OF FKBP52 REVEAL A FLEXIBLE INTER-DOMAIN JRNL TITL 3 HINGE. JRNL REF J.MOL.BIOL. V. 425 4134 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23933011 JRNL DOI 10.1016/J.JMB.2013.07.041 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 17908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 893 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1243 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3685 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.767 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.330 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.234 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.652 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3794 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5101 ; 1.341 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 467 ; 6.720 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;37.637 ;24.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 669 ;17.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.403 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 541 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2872 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2326 ; 0.368 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3728 ; 0.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1468 ; 1.274 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1373 ; 2.109 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 70 REMARK 3 RESIDUE RANGE : A 77 A 112 REMARK 3 RESIDUE RANGE : A 126 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2920 -5.8004 86.0961 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.1556 REMARK 3 T33: 0.0677 T12: -0.0270 REMARK 3 T13: -0.0497 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 6.0592 L22: 4.0624 REMARK 3 L33: 4.5943 L12: 1.1340 REMARK 3 L13: 2.7009 L23: 0.8305 REMARK 3 S TENSOR REMARK 3 S11: -0.2849 S12: 0.0913 S13: 0.2784 REMARK 3 S21: -0.2121 S22: 0.0425 S23: 0.2142 REMARK 3 S31: -0.4547 S32: 0.2038 S33: 0.2424 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9340 -5.1845 59.0542 REMARK 3 T TENSOR REMARK 3 T11: 0.0063 T22: 0.0218 REMARK 3 T33: 0.0734 T12: 0.0037 REMARK 3 T13: 0.0054 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 3.9038 L22: 3.7915 REMARK 3 L33: 1.9380 L12: 0.3586 REMARK 3 L13: 0.3520 L23: 0.1241 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: 0.0151 S13: 0.0318 REMARK 3 S21: -0.0178 S22: -0.0199 S23: -0.5114 REMARK 3 S31: -0.0577 S32: 0.1300 S33: 0.0105 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 70 REMARK 3 RESIDUE RANGE : B 77 B 112 REMARK 3 RESIDUE RANGE : B 126 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8974 -2.5106 29.4013 REMARK 3 T TENSOR REMARK 3 T11: 0.1959 T22: 0.1595 REMARK 3 T33: 0.0231 T12: -0.0158 REMARK 3 T13: 0.0406 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 4.4503 L22: 2.5688 REMARK 3 L33: 4.1280 L12: -0.9565 REMARK 3 L13: 0.2855 L23: 0.9486 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: 0.0185 S13: -0.0040 REMARK 3 S21: 0.0969 S22: -0.1495 S23: 0.1835 REMARK 3 S31: 0.1477 S32: -0.4720 S33: 0.1855 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 140 B 255 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4545 -8.7515 0.6072 REMARK 3 T TENSOR REMARK 3 T11: 0.0683 T22: 0.0345 REMARK 3 T33: 0.0367 T12: 0.0164 REMARK 3 T13: 0.0276 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 6.9019 L22: 3.1492 REMARK 3 L33: 2.1389 L12: 0.9031 REMARK 3 L13: -0.5284 L23: -0.2484 REMARK 3 S TENSOR REMARK 3 S11: 0.0616 S12: 0.2769 S13: 0.1930 REMARK 3 S21: -0.0370 S22: 0.0279 S23: 0.2276 REMARK 3 S31: 0.0491 S32: -0.0539 S33: -0.0894 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 76 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8925 -1.4322 94.5659 REMARK 3 T TENSOR REMARK 3 T11: 0.6361 T22: 1.0046 REMARK 3 T33: 0.9746 T12: 0.2376 REMARK 3 T13: 0.1283 T23: -0.2489 REMARK 3 L TENSOR REMARK 3 L11: 0.0278 L22: 32.9479 REMARK 3 L33: 15.9901 L12: -0.7203 REMARK 3 L13: -0.5068 L23: 22.9509 REMARK 3 S TENSOR REMARK 3 S11: 0.1347 S12: -0.0153 S13: 0.0065 REMARK 3 S21: -1.7050 S22: -2.0190 S23: 2.6509 REMARK 3 S31: -1.2055 S32: -1.4004 S33: 1.8843 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 32.2470 8.8479 94.5510 REMARK 3 T TENSOR REMARK 3 T11: 0.6697 T22: 0.1721 REMARK 3 T33: 0.5757 T12: -0.0532 REMARK 3 T13: -0.0207 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 14.6549 L22: 3.9596 REMARK 3 L33: 16.4537 L12: 7.4927 REMARK 3 L13: 5.6088 L23: 1.5818 REMARK 3 S TENSOR REMARK 3 S11: 0.3414 S12: -0.5001 S13: 1.4453 REMARK 3 S21: 0.3961 S22: -0.2832 S23: 0.8279 REMARK 3 S31: -1.6213 S32: -0.0958 S33: -0.0582 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 71 B 76 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5737 -4.5622 16.6497 REMARK 3 T TENSOR REMARK 3 T11: 0.4333 T22: 0.3611 REMARK 3 T33: 0.2591 T12: -0.0082 REMARK 3 T13: 0.0609 T23: 0.0736 REMARK 3 L TENSOR REMARK 3 L11: 2.7629 L22: 3.2436 REMARK 3 L33: 15.4088 L12: -2.9926 REMARK 3 L13: -6.5217 L23: 7.0684 REMARK 3 S TENSOR REMARK 3 S11: 0.0254 S12: 0.1480 S13: -0.0905 REMARK 3 S21: -0.1021 S22: -0.1955 S23: 0.0874 REMARK 3 S31: -0.2113 S32: -0.2840 S33: 0.1701 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7824 -9.0502 36.1173 REMARK 3 T TENSOR REMARK 3 T11: 0.5280 T22: 0.4359 REMARK 3 T33: 0.2876 T12: 0.1159 REMARK 3 T13: 0.0571 T23: 0.0792 REMARK 3 L TENSOR REMARK 3 L11: 12.5128 L22: 9.5644 REMARK 3 L33: 0.8717 L12: -5.3733 REMARK 3 L13: 2.9116 L23: -0.0648 REMARK 3 S TENSOR REMARK 3 S11: 0.2863 S12: 0.1627 S13: -1.4182 REMARK 3 S21: -0.3570 S22: 0.1845 S23: -0.1847 REMARK 3 S31: 0.0474 S32: 0.0930 S33: -0.4708 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LAW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.068 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18269 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 117.041 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.31400 REMARK 200 R SYM FOR SHELL (I) : 0.31400 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Q1C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG6000, 0.1 M TRIS-HCL, PH 8.0, REMARK 280 5% DMSO, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.34950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 ALA A 16 REMARK 465 PRO A 17 REMARK 465 LEU A 18 REMARK 465 PRO A 19 REMARK 465 MET A 20 REMARK 465 LYS A 256 REMARK 465 GLU A 257 REMARK 465 SER A 258 REMARK 465 TRP A 259 REMARK 465 GLU A 260 REMARK 465 GLY B 15 REMARK 465 ALA B 16 REMARK 465 PRO B 17 REMARK 465 LEU B 18 REMARK 465 PRO B 19 REMARK 465 MET B 20 REMARK 465 GLU B 21 REMARK 465 LYS B 256 REMARK 465 GLU B 257 REMARK 465 SER B 258 REMARK 465 TRP B 259 REMARK 465 GLU B 260 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 THR B 44 OG1 CG2 REMARK 470 GLU B 45 CG CD OE1 OE2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 GLU B 242 CG CD OE1 OE2 REMARK 470 GLU B 253 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 112 -122.18 -138.15 REMARK 500 PRO A 119 -69.67 -11.57 REMARK 500 PRO A 120 -71.98 -80.82 REMARK 500 GLU A 136 141.49 -179.36 REMARK 500 LYS A 179 -127.32 54.29 REMARK 500 ALA A 226 -125.41 -115.83 REMARK 500 ALA B 112 -113.46 -134.37 REMARK 500 SER B 118 101.39 38.61 REMARK 500 PRO B 119 -89.66 -57.97 REMARK 500 PHE B 135 -70.57 -105.87 REMARK 500 ALA B 226 -125.42 -116.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 118 PRO B 119 146.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q1C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RESIDUES 1-260 OF FKBP52 REMARK 900 RELATED ID: 4LAV RELATED DB: PDB REMARK 900 RELATED ID: 4LAX RELATED DB: PDB REMARK 900 RELATED ID: 4LAY RELATED DB: PDB DBREF 4LAW A 16 260 UNP Q02790 FKBP4_HUMAN 16 260 DBREF 4LAW B 16 260 UNP Q02790 FKBP4_HUMAN 16 260 SEQADV 4LAW GLY A 15 UNP Q02790 CLONING ARTIFACT SEQADV 4LAW GLY B 15 UNP Q02790 CLONING ARTIFACT SEQRES 1 A 246 GLY ALA PRO LEU PRO MET GLU GLY VAL ASP ILE SER PRO SEQRES 2 A 246 LYS GLN ASP GLU GLY VAL LEU LYS VAL ILE LYS ARG GLU SEQRES 3 A 246 GLY THR GLY THR GLU MET PRO MET ILE GLY ASP ARG VAL SEQRES 4 A 246 PHE VAL HIS TYR THR GLY TRP LEU LEU ASP GLY THR LYS SEQRES 5 A 246 PHE ASP SER SER LEU ASP ARG LYS ASP LYS PHE SER PHE SEQRES 6 A 246 ASP LEU GLY LYS GLY GLU VAL ILE LYS ALA TRP ASP ILE SEQRES 7 A 246 ALA ILE ALA THR MET LYS VAL GLY GLU VAL CYS HIS ILE SEQRES 8 A 246 THR CYS LYS PRO GLU TYR ALA TYR GLY SER ALA GLY SER SEQRES 9 A 246 PRO PRO LYS ILE PRO PRO ASN ALA THR LEU VAL PHE GLU SEQRES 10 A 246 VAL GLU LEU PHE GLU PHE LYS GLY GLU ASP LEU THR GLU SEQRES 11 A 246 GLU GLU ASP GLY GLY ILE ILE ARG ARG ILE GLN THR ARG SEQRES 12 A 246 GLY GLU GLY TYR ALA LYS PRO ASN GLU GLY ALA ILE VAL SEQRES 13 A 246 GLU VAL ALA LEU GLU GLY TYR TYR LYS ASP LYS LEU PHE SEQRES 14 A 246 ASP GLN ARG GLU LEU ARG PHE GLU ILE GLY GLU GLY GLU SEQRES 15 A 246 ASN LEU ASP LEU PRO TYR GLY LEU GLU ARG ALA ILE GLN SEQRES 16 A 246 ARG MET GLU LYS GLY GLU HIS SER ILE VAL TYR LEU LYS SEQRES 17 A 246 PRO SER TYR ALA PHE GLY SER VAL GLY LYS GLU LYS PHE SEQRES 18 A 246 GLN ILE PRO PRO ASN ALA GLU LEU LYS TYR GLU LEU HIS SEQRES 19 A 246 LEU LYS SER PHE GLU LYS ALA LYS GLU SER TRP GLU SEQRES 1 B 246 GLY ALA PRO LEU PRO MET GLU GLY VAL ASP ILE SER PRO SEQRES 2 B 246 LYS GLN ASP GLU GLY VAL LEU LYS VAL ILE LYS ARG GLU SEQRES 3 B 246 GLY THR GLY THR GLU MET PRO MET ILE GLY ASP ARG VAL SEQRES 4 B 246 PHE VAL HIS TYR THR GLY TRP LEU LEU ASP GLY THR LYS SEQRES 5 B 246 PHE ASP SER SER LEU ASP ARG LYS ASP LYS PHE SER PHE SEQRES 6 B 246 ASP LEU GLY LYS GLY GLU VAL ILE LYS ALA TRP ASP ILE SEQRES 7 B 246 ALA ILE ALA THR MET LYS VAL GLY GLU VAL CYS HIS ILE SEQRES 8 B 246 THR CYS LYS PRO GLU TYR ALA TYR GLY SER ALA GLY SER SEQRES 9 B 246 PRO PRO LYS ILE PRO PRO ASN ALA THR LEU VAL PHE GLU SEQRES 10 B 246 VAL GLU LEU PHE GLU PHE LYS GLY GLU ASP LEU THR GLU SEQRES 11 B 246 GLU GLU ASP GLY GLY ILE ILE ARG ARG ILE GLN THR ARG SEQRES 12 B 246 GLY GLU GLY TYR ALA LYS PRO ASN GLU GLY ALA ILE VAL SEQRES 13 B 246 GLU VAL ALA LEU GLU GLY TYR TYR LYS ASP LYS LEU PHE SEQRES 14 B 246 ASP GLN ARG GLU LEU ARG PHE GLU ILE GLY GLU GLY GLU SEQRES 15 B 246 ASN LEU ASP LEU PRO TYR GLY LEU GLU ARG ALA ILE GLN SEQRES 16 B 246 ARG MET GLU LYS GLY GLU HIS SER ILE VAL TYR LEU LYS SEQRES 17 B 246 PRO SER TYR ALA PHE GLY SER VAL GLY LYS GLU LYS PHE SEQRES 18 B 246 GLN ILE PRO PRO ASN ALA GLU LEU LYS TYR GLU LEU HIS SEQRES 19 B 246 LEU LYS SER PHE GLU LYS ALA LYS GLU SER TRP GLU HET DMS A 301 4 HET DMS A 302 4 HET DMS A 303 4 HET DMS A 304 4 HET DMS A 305 4 HET DMS B 301 4 HET DMS B 302 4 HET DMS B 303 4 HET DMS B 304 4 HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 DMS 9(C2 H6 O S) FORMUL 12 HOH *74(H2 O) HELIX 1 1 ILE A 87 ALA A 95 1 9 HELIX 2 2 PRO A 109 ALA A 112 5 4 HELIX 3 3 GLU A 194 LEU A 198 5 5 HELIX 4 4 PRO A 201 GLN A 209 1 9 HELIX 5 5 PRO A 223 ALA A 226 5 4 HELIX 6 6 LYS A 232 GLN A 236 5 5 HELIX 7 7 ILE B 87 ILE B 94 1 8 HELIX 8 8 ALA B 95 MET B 97 5 3 HELIX 9 9 PRO B 109 ALA B 112 5 4 HELIX 10 10 GLU B 194 ASP B 199 5 6 HELIX 11 11 PRO B 201 GLN B 209 1 9 HELIX 12 12 PRO B 223 ALA B 226 5 4 HELIX 13 13 LYS B 232 GLN B 236 5 5 SHEET 1 A 6 VAL A 23 ASP A 24 0 SHEET 2 A 6 VAL A 33 ARG A 39 -1 O LYS A 35 N VAL A 23 SHEET 3 A 6 VAL A 102 CYS A 107 -1 O HIS A 104 N VAL A 36 SHEET 4 A 6 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 5 A 6 ARG A 52 TRP A 60 -1 N PHE A 54 O PHE A 135 SHEET 6 A 6 LYS A 66 SER A 69 -1 O ASP A 68 N GLY A 59 SHEET 1 B 6 VAL A 23 ASP A 24 0 SHEET 2 B 6 VAL A 33 ARG A 39 -1 O LYS A 35 N VAL A 23 SHEET 3 B 6 VAL A 102 CYS A 107 -1 O HIS A 104 N VAL A 36 SHEET 4 B 6 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 5 B 6 ARG A 52 TRP A 60 -1 N PHE A 54 O PHE A 135 SHEET 6 B 6 PHE A 77 ASP A 80 -1 O PHE A 77 N VAL A 55 SHEET 1 C 6 GLU A 140 ASP A 141 0 SHEET 2 C 6 ILE A 150 THR A 156 -1 O ARG A 152 N GLU A 140 SHEET 3 C 6 HIS A 216 LEU A 221 -1 O HIS A 216 N GLN A 155 SHEET 4 C 6 LEU A 243 GLU A 253 -1 O TYR A 245 N VAL A 219 SHEET 5 C 6 ILE A 169 TYR A 178 -1 N GLU A 175 O GLU A 246 SHEET 6 C 6 LYS A 181 GLU A 191 -1 O ARG A 186 N LEU A 174 SHEET 1 D 6 VAL B 23 ASP B 24 0 SHEET 2 D 6 VAL B 33 ARG B 39 -1 O LYS B 35 N VAL B 23 SHEET 3 D 6 VAL B 102 CYS B 107 -1 O HIS B 104 N VAL B 36 SHEET 4 D 6 LEU B 128 LEU B 134 -1 O LEU B 128 N CYS B 107 SHEET 5 D 6 ARG B 52 LEU B 61 -1 N TRP B 60 O VAL B 129 SHEET 6 D 6 LYS B 66 SER B 69 -1 O ASP B 68 N GLY B 59 SHEET 1 E 6 VAL B 23 ASP B 24 0 SHEET 2 E 6 VAL B 33 ARG B 39 -1 O LYS B 35 N VAL B 23 SHEET 3 E 6 VAL B 102 CYS B 107 -1 O HIS B 104 N VAL B 36 SHEET 4 E 6 LEU B 128 LEU B 134 -1 O LEU B 128 N CYS B 107 SHEET 5 E 6 ARG B 52 LEU B 61 -1 N TRP B 60 O VAL B 129 SHEET 6 E 6 PHE B 77 ASP B 80 -1 O PHE B 77 N VAL B 55 SHEET 1 F 6 GLU B 140 ASP B 141 0 SHEET 2 F 6 ILE B 150 THR B 156 -1 O ARG B 152 N GLU B 140 SHEET 3 F 6 HIS B 216 LEU B 221 -1 O HIS B 216 N GLN B 155 SHEET 4 F 6 LEU B 243 GLU B 253 -1 O TYR B 245 N VAL B 219 SHEET 5 F 6 ILE B 169 TYR B 178 -1 N ALA B 173 O HIS B 248 SHEET 6 F 6 LYS B 181 GLU B 191 -1 O PHE B 190 N VAL B 170 SITE 1 AC1 2 GLU A 110 SER A 115 SITE 1 AC2 4 ARG A 157 GLY A 158 TYR A 161 GLU A 212 SITE 1 AC3 5 GLU A 166 TYR A 202 GLU A 205 ARG A 206 SITE 2 AC3 5 GLN A 209 SITE 1 AC4 4 VAL A 86 ILE A 87 TYR A 113 PHE A 130 SITE 1 AC5 2 VAL A 99 PHE A 137 SITE 1 AC6 3 PHE B 54 GLU B 136 TYR B 220 SITE 1 AC7 4 PHE B 77 VAL B 86 ILE B 87 TYR B 113 SITE 1 AC8 6 GLU B 166 GLY B 193 TYR B 202 GLU B 205 SITE 2 AC8 6 ARG B 206 GLN B 209 SITE 1 AC9 4 ARG A 189 GLU A 191 PRO B 124 HOH B 409 CRYST1 47.660 42.699 116.883 90.00 92.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020982 0.000000 0.000881 0.00000 SCALE2 0.000000 0.023420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008563 0.00000