HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-JUN-13 4LBA TITLE CRYSTAL STRUCTURE OF A CONJUGATIVE TRANSPOSON LIPOPROTEIN TITLE 2 (BACEGG_03088) FROM BACTEROIDES EGGERTHII DSM 20697 AT 1.70 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONJUGATIVE TRANSPOSON LIPOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES EGGERTHII; SOURCE 3 ORGANISM_TAXID: 483216; SOURCE 4 STRAIN: DSM 20697; SOURCE 5 GENE: BACEGG_03088, ZP_03460274.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF12988 FAMILY PROTEIN, DUF3872, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4LBA 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4LBA 1 JRNL REVDAT 2 15-NOV-17 4LBA 1 REMARK REVDAT 1 07-AUG-13 4LBA 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A CONJUGATIVE TRANSPOSON LIPOPROTEIN JRNL TITL 2 (BACEGG_03088) FROM BACTEROIDES EGGERTHII DSM 20697 AT 1.70 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 40187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2780 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1763 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.27000 REMARK 3 B12 (A**2) : 0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1971 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1835 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2666 ; 1.573 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4252 ; 1.020 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 5.754 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;31.894 ;25.185 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 310 ;13.565 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 6.821 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 281 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2256 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 472 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 907 ; 4.151 ; 3.971 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 906 ; 4.150 ; 3.959 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1140 ; 6.637 ; 7.338 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 85.1960 30.1440 32.4500 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.0981 REMARK 3 T33: 0.0724 T12: -0.1139 REMARK 3 T13: -0.0123 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.1501 L22: 4.0274 REMARK 3 L33: 0.6878 L12: 1.5949 REMARK 3 L13: 0.8337 L23: 1.5082 REMARK 3 S TENSOR REMARK 3 S11: -0.0280 S12: 0.1254 S13: 0.0484 REMARK 3 S21: 0.1067 S22: -0.0365 S23: 0.0961 REMARK 3 S31: -0.0003 S32: 0.0206 S33: 0.0645 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 38 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): 76.2880 5.1770 25.4300 REMARK 3 T TENSOR REMARK 3 T11: 0.0700 T22: 0.0541 REMARK 3 T33: 0.0266 T12: -0.0225 REMARK 3 T13: 0.0099 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.9447 L22: 2.6255 REMARK 3 L33: 0.5531 L12: -0.2940 REMARK 3 L13: -0.0374 L23: 0.7587 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.0707 S13: 0.0509 REMARK 3 S21: -0.0161 S22: 0.1190 S23: -0.1389 REMARK 3 S31: -0.0566 S32: 0.1020 S33: -0.0513 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 6. PEG3350 FRAGMENT (1PE) AND 1,2-ETHANEDIOL (EDO) REMARK 3 MOLECULES FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE REMARK 3 MODELED. REMARK 4 REMARK 4 4LBA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97864, 0.97817 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40202 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.217 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.82800 REMARK 200 R SYM FOR SHELL (I) : 0.82800 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16.0% POLYETHYLENE GLYCOL 3350, 0.2M REMARK 280 MAGNESIUM CHLORIDE, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.11733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.23467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.11733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.23467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 316 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 CYS A 32 REMARK 465 ASP A 33 REMARK 465 ASP A 34 REMARK 465 ASP A 35 REMARK 465 MSE A 36 REMARK 465 ASP A 37 REMARK 465 ILE A 38 REMARK 465 GLN A 39 REMARK 465 GLN A 40 REMARK 465 ARG A 147 REMARK 465 ASN A 148 REMARK 465 VAL A 149 REMARK 465 LYS A 150 REMARK 465 ASP A 151 REMARK 465 ASP A 152 REMARK 465 ASP A 153 REMARK 465 LEU A 154 REMARK 465 THR A 155 REMARK 465 ILE A 156 REMARK 465 VAL A 157 REMARK 465 PRO A 158 REMARK 465 ILE A 159 REMARK 465 GLY A 160 REMARK 465 ASN A 161 REMARK 465 PHE A 162 REMARK 465 SER A 163 REMARK 465 PRO A 164 REMARK 465 LEU A 165 REMARK 465 LEU A 166 REMARK 465 LYS A 167 REMARK 465 GLY B 0 REMARK 465 CYS B 32 REMARK 465 ASP B 33 REMARK 465 ASP B 34 REMARK 465 ASP B 35 REMARK 465 MSE B 36 REMARK 465 ASP B 37 REMARK 465 ARG B 147 REMARK 465 ASN B 148 REMARK 465 VAL B 149 REMARK 465 LYS B 150 REMARK 465 ASP B 151 REMARK 465 ASP B 152 REMARK 465 ASP B 153 REMARK 465 LEU B 154 REMARK 465 THR B 155 REMARK 465 ILE B 156 REMARK 465 VAL B 157 REMARK 465 PRO B 158 REMARK 465 ILE B 159 REMARK 465 GLY B 160 REMARK 465 ASN B 161 REMARK 465 PHE B 162 REMARK 465 SER B 163 REMARK 465 PRO B 164 REMARK 465 LEU B 165 REMARK 465 LEU B 166 REMARK 465 LYS B 167 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE B 38 CG1 CG2 CD1 REMARK 470 GLN B 39 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 74 154.56 60.53 REMARK 500 ASN A 102 -14.37 76.57 REMARK 500 SER B 74 156.71 59.57 REMARK 500 ASN B 102 -13.48 72.87 REMARK 500 ASN B 145 33.16 70.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417670 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 32-167 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4LBA A 32 167 UNP B7AKX5 B7AKX5_9BACE 32 167 DBREF 4LBA B 32 167 UNP B7AKX5 B7AKX5_9BACE 32 167 SEQADV 4LBA GLY A 0 UNP B7AKX5 EXPRESSION TAG SEQADV 4LBA GLY B 0 UNP B7AKX5 EXPRESSION TAG SEQRES 1 A 137 GLY CYS ASP ASP ASP MSE ASP ILE GLN GLN SER TYR PRO SEQRES 2 A 137 PHE THR VAL GLU VAL MSE PRO VAL PRO ASN LYS VAL VAL SEQRES 3 A 137 LYS GLY GLN THR VAL GLU ILE ARG CYS GLU LEU LYS LYS SEQRES 4 A 137 GLU GLY ASP PHE SER GLY THR LEU TYR THR ILE ARG TYR SEQRES 5 A 137 PHE GLN PHE GLU GLY GLU GLY SER LEU LYS MSE ASP ASN SEQRES 6 A 137 GLY ILE THR PHE LEU PRO ASN ASP ARG TYR LEU LEU GLU SEQRES 7 A 137 ASN GLU LYS PHE ARG LEU TYR TYR THR ALA ALA GLY ASP SEQRES 8 A 137 GLU ALA HIS ASN PHE ILE VAL VAL VAL GLU ASP ASN PHE SEQRES 9 A 137 SER ASN SER TYR GLU LEU GLU PHE ASP PHE ASN ASN ARG SEQRES 10 A 137 ASN VAL LYS ASP ASP ASP LEU THR ILE VAL PRO ILE GLY SEQRES 11 A 137 ASN PHE SER PRO LEU LEU LYS SEQRES 1 B 137 GLY CYS ASP ASP ASP MSE ASP ILE GLN GLN SER TYR PRO SEQRES 2 B 137 PHE THR VAL GLU VAL MSE PRO VAL PRO ASN LYS VAL VAL SEQRES 3 B 137 LYS GLY GLN THR VAL GLU ILE ARG CYS GLU LEU LYS LYS SEQRES 4 B 137 GLU GLY ASP PHE SER GLY THR LEU TYR THR ILE ARG TYR SEQRES 5 B 137 PHE GLN PHE GLU GLY GLU GLY SER LEU LYS MSE ASP ASN SEQRES 6 B 137 GLY ILE THR PHE LEU PRO ASN ASP ARG TYR LEU LEU GLU SEQRES 7 B 137 ASN GLU LYS PHE ARG LEU TYR TYR THR ALA ALA GLY ASP SEQRES 8 B 137 GLU ALA HIS ASN PHE ILE VAL VAL VAL GLU ASP ASN PHE SEQRES 9 B 137 SER ASN SER TYR GLU LEU GLU PHE ASP PHE ASN ASN ARG SEQRES 10 B 137 ASN VAL LYS ASP ASP ASP LEU THR ILE VAL PRO ILE GLY SEQRES 11 B 137 ASN PHE SER PRO LEU LEU LYS MODRES 4LBA MSE A 49 MET SELENOMETHIONINE MODRES 4LBA MSE A 93 MET SELENOMETHIONINE MODRES 4LBA MSE B 49 MET SELENOMETHIONINE MODRES 4LBA MSE B 93 MET SELENOMETHIONINE HET MSE A 49 13 HET MSE A 93 13 HET MSE B 49 13 HET MSE B 93 8 HET 1PE A 201 13 HET EDO A 202 4 HET EDO A 203 4 HET EDO A 204 4 HET 1PE B 201 16 HET EDO B 202 4 HET EDO B 203 4 HET EDO B 204 8 HETNAM MSE SELENOMETHIONINE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN 1PE PEG400 HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 1PE 2(C10 H22 O6) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 11 HOH *245(H2 O) SHEET 1 A 4 PHE A 44 VAL A 48 0 SHEET 2 A 4 THR A 60 LYS A 69 -1 O LYS A 68 N THR A 45 SHEET 3 A 4 LYS A 111 ALA A 118 -1 O LEU A 114 N ILE A 63 SHEET 4 A 4 GLY A 89 MSE A 93 -1 N SER A 90 O THR A 117 SHEET 1 B 4 TYR A 105 LEU A 106 0 SHEET 2 B 4 TYR A 78 GLU A 86 -1 N ILE A 80 O TYR A 105 SHEET 3 B 4 HIS A 124 ASP A 132 -1 O VAL A 129 N ARG A 81 SHEET 4 B 4 SER A 137 PHE A 144 -1 O LEU A 140 N VAL A 128 SHEET 1 C 4 PHE B 44 VAL B 48 0 SHEET 2 C 4 THR B 60 LYS B 69 -1 O LYS B 68 N THR B 45 SHEET 3 C 4 LYS B 111 ALA B 118 -1 O LEU B 114 N ILE B 63 SHEET 4 C 4 GLY B 89 MSE B 93 -1 N SER B 90 O THR B 117 SHEET 1 D 4 TYR B 105 LEU B 107 0 SHEET 2 D 4 TYR B 78 GLU B 86 -1 N TYR B 78 O LEU B 107 SHEET 3 D 4 HIS B 124 ASP B 132 -1 O VAL B 129 N ARG B 81 SHEET 4 D 4 SER B 137 PHE B 144 -1 O PHE B 142 N PHE B 126 LINK C VAL A 48 N MSE A 49 1555 1555 1.33 LINK C MSE A 49 N PRO A 50 1555 1555 1.34 LINK C LYS A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N ASP A 94 1555 1555 1.33 LINK C VAL B 48 N MSE B 49 1555 1555 1.33 LINK C MSE B 49 N PRO B 50 1555 1555 1.36 LINK C LYS B 92 N MSE B 93 1555 1555 1.32 LINK C MSE B 93 N ASP B 94 1555 1555 1.33 CISPEP 1 TYR A 42 PRO A 43 0 -4.52 CISPEP 2 TYR B 42 PRO B 43 0 -0.55 SITE 1 AC1 4 PHE A 73 LYS A 92 GLY A 96 TYR A 115 SITE 1 AC2 2 TYR A 138 GLU A 139 SITE 1 AC3 4 PHE A 85 ILE A 127 HOH A 320 HOH A 368 SITE 1 AC4 3 GLU A 141 HOH A 317 HOH A 392 SITE 1 AC5 6 PHE B 73 LYS B 92 MSE B 93 GLY B 96 SITE 2 AC5 6 TYR B 115 THR B 117 SITE 1 AC6 5 LYS B 69 THR B 76 LEU B 107 GLU B 110 SITE 2 AC6 5 HOH B 321 SITE 1 AC7 9 PHE A 83 HOH A 321 PRO B 50 VAL B 51 SITE 2 AC7 9 PRO B 52 VAL B 61 GLU B 62 HOH B 383 SITE 3 AC7 9 HOH B 385 SITE 1 AC8 4 ASN B 125 GLU B 141 ASP B 143 HOH B 388 CRYST1 126.923 126.923 39.352 90.00 90.00 120.00 P 64 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007879 0.004549 0.000000 0.00000 SCALE2 0.000000 0.009098 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025412 0.00000