HEADER HYDROLASE/ANTIBIOTIC 21-JUN-13 4LCH TITLE CRYSTAL STRUCTURE OF THE PSEUDOMONAS AERUGINOSA LPXC/LPC-051 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-3-O-[3-HYDROXYMYRISTOYL] N-ACETYLGLUCOSAMINE COMPND 3 DEACETYLASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 1-299; COMPND 6 SYNONYM: PROTEIN ENVA, UDP-3-O-ACYL-GLCNAC DEACETYLASE; COMPND 7 EC: 3.5.1.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: ENVA, LPXC, PA4406; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS LIPID A BIOSYNTHESIS, LIPID A SYNTHESIS, BAAB SANDWICH, LPXC, KEYWDS 2 DEACETYLATION, ACYL UDP-GLCNAC, HYDROXAMATE, HYDROLASE-ANTIBIOTIC KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.-J.LEE,P.ZHOU REVDAT 4 28-FEB-24 4LCH 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4LCH 1 REMARK REVDAT 2 25-SEP-13 4LCH 1 JRNL REVDAT 1 21-AUG-13 4LCH 0 JRNL AUTH X.LIANG,C.J.LEE,J.ZHAO,E.J.TOONE,P.ZHOU JRNL TITL SYNTHESIS, STRUCTURE, AND ANTIBIOTIC ACTIVITY OF JRNL TITL 2 ARYL-SUBSTITUTED LPXC INHIBITORS. JRNL REF J.MED.CHEM. V. 56 6954 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23914798 JRNL DOI 10.1021/JM4007774 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 45191 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8661 - 4.0119 0.95 2825 148 0.1704 0.2011 REMARK 3 2 4.0119 - 3.1886 0.95 2689 143 0.1645 0.2025 REMARK 3 3 3.1886 - 2.7868 0.98 2732 157 0.1933 0.2002 REMARK 3 4 2.7868 - 2.5326 0.98 2724 133 0.1940 0.2510 REMARK 3 5 2.5326 - 2.3514 0.98 2723 159 0.1788 0.2097 REMARK 3 6 2.3514 - 2.2129 0.98 2664 153 0.1748 0.1986 REMARK 3 7 2.2129 - 2.1022 0.98 2719 127 0.1708 0.1788 REMARK 3 8 2.1022 - 2.0108 0.98 2710 119 0.1647 0.2327 REMARK 3 9 2.0108 - 1.9335 0.98 2695 133 0.1874 0.2530 REMARK 3 10 1.9335 - 1.8668 0.98 2689 144 0.1784 0.2259 REMARK 3 11 1.8668 - 1.8085 0.98 2660 166 0.1891 0.2558 REMARK 3 12 1.8085 - 1.7568 0.98 2675 129 0.1998 0.2452 REMARK 3 13 1.7568 - 1.7106 0.97 2646 144 0.2102 0.2538 REMARK 3 14 1.7106 - 1.6689 0.98 2689 124 0.2133 0.2501 REMARK 3 15 1.6689 - 1.6309 0.97 2628 164 0.2270 0.2678 REMARK 3 16 1.6309 - 1.5960 0.90 2445 135 0.2583 0.3160 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2455 REMARK 3 ANGLE : 1.242 3310 REMARK 3 CHIRALITY : 0.083 369 REMARK 3 PLANARITY : 0.007 438 REMARK 3 DIHEDRAL : 13.802 900 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 16.3178 -4.0851 -7.7499 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.1543 REMARK 3 T33: 0.1435 T12: -0.0009 REMARK 3 T13: -0.0014 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.7316 L22: 0.7949 REMARK 3 L33: 1.0613 L12: -0.0699 REMARK 3 L13: -0.2974 L23: -0.1883 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0545 S13: 0.0083 REMARK 3 S21: -0.0074 S22: 0.0218 S23: 0.0003 REMARK 3 S31: -0.0491 S32: -0.0390 S33: -0.0303 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45214 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.596 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.59850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.01850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.76350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.01850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.59850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.76350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 297 REMARK 465 ARG A 298 REMARK 465 PRO A 299 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 8 CE REMARK 480 GLU A 55 CD REMARK 480 ARG A 133 CG NE CZ REMARK 480 LYS A 183 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 647 O HOH A 727 2.10 REMARK 500 O HOH A 656 O HOH A 673 2.12 REMARK 500 O HOH A 533 O HOH A 555 2.13 REMARK 500 O HOH A 607 O HOH A 651 2.18 REMARK 500 O GLY A 58 O HOH A 522 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 62 -31.90 73.76 REMARK 500 MET A 103 -121.34 54.24 REMARK 500 ASP A 159 51.67 -143.26 REMARK 500 ASP A 232 46.62 -109.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 78 NE2 REMARK 620 2 HIS A 237 NE2 97.0 REMARK 620 3 ASP A 241 OD1 97.4 98.8 REMARK 620 4 ASP A 241 OD2 154.0 87.4 56.6 REMARK 620 5 1WN A 304 O04 118.5 87.2 142.7 87.2 REMARK 620 6 1WN A 304 O01 97.1 162.4 89.8 84.7 76.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 162 ND1 REMARK 620 2 GLU A 219 OE1 137.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1WN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 320 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LCF RELATED DB: PDB REMARK 900 RELATED ID: 4LCG RELATED DB: PDB DBREF 4LCH A 1 299 UNP P47205 LPXC_PSEAE 1 299 SEQADV 4LCH SER A 40 UNP P47205 CYS 40 ENGINEERED MUTATION SEQRES 1 A 299 MET ILE LYS GLN ARG THR LEU LYS ASN ILE ILE ARG ALA SEQRES 2 A 299 THR GLY VAL GLY LEU HIS SER GLY GLU LYS VAL TYR LEU SEQRES 3 A 299 THR LEU LYS PRO ALA PRO VAL ASP THR GLY ILE VAL PHE SEQRES 4 A 299 SER ARG THR ASP LEU ASP PRO VAL VAL GLU ILE PRO ALA SEQRES 5 A 299 ARG ALA GLU ASN VAL GLY GLU THR THR MET SER THR THR SEQRES 6 A 299 LEU VAL LYS GLY ASP VAL LYS VAL ASP THR VAL GLU HIS SEQRES 7 A 299 LEU LEU SER ALA MET ALA GLY LEU GLY ILE ASP ASN ALA SEQRES 8 A 299 TYR VAL GLU LEU SER ALA SER GLU VAL PRO ILE MET ASP SEQRES 9 A 299 GLY SER ALA GLY PRO PHE VAL PHE LEU ILE GLN SER ALA SEQRES 10 A 299 GLY LEU GLN GLU GLN GLU ALA ALA LYS LYS PHE ILE ARG SEQRES 11 A 299 ILE LYS ARG GLU VAL SER VAL GLU GLU GLY ASP LYS ARG SEQRES 12 A 299 ALA VAL PHE VAL PRO PHE ASP GLY PHE LYS VAL SER PHE SEQRES 13 A 299 GLU ILE ASP PHE ASP HIS PRO VAL PHE ARG GLY ARG THR SEQRES 14 A 299 GLN GLN ALA SER VAL ASP PHE SER SER THR SER PHE VAL SEQRES 15 A 299 LYS GLU VAL SER ARG ALA ARG THR PHE GLY PHE MET ARG SEQRES 16 A 299 ASP ILE GLU TYR LEU ARG SER GLN ASN LEU ALA LEU GLY SEQRES 17 A 299 GLY SER VAL GLU ASN ALA ILE VAL VAL ASP GLU ASN ARG SEQRES 18 A 299 VAL LEU ASN GLU ASP GLY LEU ARG TYR GLU ASP GLU PHE SEQRES 19 A 299 VAL LYS HIS LYS ILE LEU ASP ALA ILE GLY ASP LEU TYR SEQRES 20 A 299 LEU LEU GLY ASN SER LEU ILE GLY GLU PHE ARG GLY PHE SEQRES 21 A 299 LYS SER GLY HIS ALA LEU ASN ASN GLN LEU LEU ARG THR SEQRES 22 A 299 LEU ILE ALA ASP LYS ASP ALA TRP GLU VAL VAL THR PHE SEQRES 23 A 299 GLU ASP ALA ARG THR ALA PRO ILE SER TYR MET ARG PRO HET ZN A 301 1 HET ZN A 302 1 HET ZN A 303 1 HET 1WN A 304 35 HET NO3 A 305 4 HET NO3 A 306 4 HET NO3 A 307 4 HET NO3 A 308 4 HET NO3 A 309 4 HET NO3 A 310 4 HET NO3 A 311 4 HET NO3 A 312 4 HET NO3 A 313 4 HET NO3 A 314 4 HET NO3 A 315 4 HET NO3 A 316 4 HET NO3 A 317 4 HET NO3 A 318 4 HET NO3 A 319 4 HET NO3 A 320 4 HETNAM ZN ZINC ION HETNAM 1WN (BETAS)-NALPHA-{4-[4-(4-AMINOPHENYL)BUTA-1,3-DIYN-1- HETNAM 2 1WN YL]BENZOYL}-N,BETA-DIHYDROXY-BETA-METHYL-L- HETNAM 3 1WN TYROSINAMIDE HETNAM NO3 NITRATE ION FORMUL 2 ZN 3(ZN 2+) FORMUL 5 1WN C27 H23 N3 O5 FORMUL 6 NO3 16(N O3 1-) FORMUL 22 HOH *332(H2 O) HELIX 1 1 ARG A 53 VAL A 57 5 5 HELIX 2 2 VAL A 76 LEU A 86 1 11 HELIX 3 3 ALA A 107 GLY A 118 1 12 HELIX 4 4 HIS A 162 ARG A 166 5 5 HELIX 5 5 SER A 180 VAL A 185 1 6 HELIX 6 6 MET A 194 GLN A 203 1 10 HELIX 7 7 ASP A 232 TYR A 247 1 16 HELIX 8 8 LEU A 248 GLY A 250 5 3 HELIX 9 9 GLY A 263 ASP A 277 1 15 HELIX 10 10 ASP A 288 ALA A 292 5 5 SHEET 1 A 2 LYS A 3 LEU A 7 0 SHEET 2 A 2 LEU A 119 ALA A 125 -1 O GLN A 120 N THR A 6 SHEET 1 B 5 ILE A 11 VAL A 16 0 SHEET 2 B 5 LYS A 23 PRO A 30 -1 O VAL A 24 N GLY A 15 SHEET 3 B 5 ALA A 91 LEU A 95 -1 O GLU A 94 N THR A 27 SHEET 4 B 5 ILE A 37 ARG A 41 1 N SER A 40 O VAL A 93 SHEET 5 B 5 VAL A 48 PRO A 51 -1 O ILE A 50 N PHE A 39 SHEET 1 C 2 LEU A 66 LYS A 68 0 SHEET 2 C 2 VAL A 71 VAL A 73 -1 O VAL A 73 N LEU A 66 SHEET 1 D 5 VAL A 135 GLU A 139 0 SHEET 2 D 5 LYS A 142 VAL A 147 -1 O PHE A 146 N VAL A 135 SHEET 3 D 5 SER A 252 PHE A 260 -1 O GLU A 256 N VAL A 147 SHEET 4 D 5 PHE A 152 GLU A 157 1 N SER A 155 O PHE A 257 SHEET 5 D 5 GLN A 171 ASP A 175 -1 O VAL A 174 N VAL A 154 SHEET 1 E 5 VAL A 135 GLU A 139 0 SHEET 2 E 5 LYS A 142 VAL A 147 -1 O PHE A 146 N VAL A 135 SHEET 3 E 5 SER A 252 PHE A 260 -1 O GLU A 256 N VAL A 147 SHEET 4 E 5 PHE A 128 ILE A 131 1 N ILE A 129 O ILE A 254 SHEET 5 E 5 TRP A 281 VAL A 284 -1 O GLU A 282 N ARG A 130 SHEET 1 F 2 PHE A 191 PHE A 193 0 SHEET 2 F 2 ILE A 215 VAL A 217 1 O VAL A 217 N GLY A 192 LINK NE2 HIS A 78 ZN ZN A 301 1555 1555 2.07 LINK ND1 HIS A 162 ZN ZN A 302 1555 1555 2.02 LINK OE1 GLU A 219 ZN ZN A 302 1555 1555 1.82 LINK NE2 HIS A 237 ZN ZN A 301 1555 1555 2.07 LINK OD1 ASP A 241 ZN ZN A 301 1555 1555 1.98 LINK OD2 ASP A 241 ZN ZN A 301 1555 1555 2.46 LINK ZN ZN A 301 O04 1WN A 304 1555 1555 2.18 LINK ZN ZN A 301 O01 1WN A 304 1555 1555 2.28 CISPEP 1 ASP A 45 PRO A 46 0 2.49 SITE 1 AC1 4 HIS A 78 HIS A 237 ASP A 241 1WN A 304 SITE 1 AC2 4 HIS A 162 GLU A 219 ASP A 277 ASP A 279 SITE 1 AC3 2 ARG A 166 ARG A 272 SITE 1 AC4 20 LEU A 18 MET A 62 GLU A 77 HIS A 78 SITE 2 AC4 20 PHE A 112 GLN A 115 SER A 116 THR A 190 SITE 3 AC4 20 PHE A 191 ILE A 197 GLY A 209 SER A 210 SITE 4 AC4 20 VAL A 216 HIS A 237 ASP A 241 HIS A 264 SITE 5 AC4 20 ZN A 301 NO3 A 316 HOH A 494 HOH A 726 SITE 1 AC5 9 ILE A 158 ARG A 168 THR A 169 GLN A 170 SITE 2 AC5 9 ASP A 232 GLU A 233 PHE A 234 VAL A 235 SITE 3 AC5 9 HOH A 512 SITE 1 AC6 5 ILE A 158 ASP A 159 PHE A 160 LYS A 261 SITE 2 AC6 5 HOH A 655 SITE 1 AC7 8 MET A 103 ASP A 104 PRO A 109 GLU A 198 SITE 2 AC7 8 HOH A 411 HOH A 476 HOH A 537 HOH A 665 SITE 1 AC8 7 ILE A 10 ARG A 12 ARG A 143 VAL A 145 SITE 2 AC8 7 ARG A 258 PHE A 260 HOH A 608 SITE 1 AC9 9 ARG A 189 SER A 202 GLN A 203 ASN A 204 SITE 2 AC9 9 ARG A 229 HOH A 424 HOH A 504 HOH A 582 SITE 3 AC9 9 HOH A 652 SITE 1 BC1 8 ARG A 12 THR A 14 ARG A 133 GLU A 134 SITE 2 BC1 8 PRO A 148 HOH A 407 HOH A 482 HOH A 607 SITE 1 BC2 5 TYR A 230 GLU A 231 ASP A 232 LYS A 236 SITE 2 BC2 5 NO3 A 314 SITE 1 BC3 7 TYR A 25 SER A 96 PRO A 148 PHE A 149 SITE 2 BC3 7 ASP A 150 HOH A 405 HOH A 526 SITE 1 BC4 7 GLU A 139 LYS A 142 GLY A 263 HIS A 264 SITE 2 BC4 7 ALA A 265 LEU A 266 HOH A 597 SITE 1 BC5 5 GLU A 184 TYR A 230 LYS A 236 NO3 A 311 SITE 2 BC5 5 HOH A 454 SITE 1 BC6 4 THR A 14 GLY A 15 VAL A 16 LYS A 23 SITE 1 BC7 6 THR A 60 MET A 62 GLY A 263 HIS A 264 SITE 2 BC7 6 1WN A 304 HOH A 704 SITE 1 BC8 4 LYS A 23 ARG A 133 HOH A 651 HOH A 721 SITE 1 BC9 4 GLN A 115 SER A 180 VAL A 182 HOH A 545 SITE 1 CC1 7 THR A 285 PHE A 286 GLU A 287 HOH A 600 SITE 2 CC1 7 HOH A 664 HOH A 710 HOH A 719 SITE 1 CC2 9 PHE A 176 SER A 177 PRO A 293 ILE A 294 SITE 2 CC2 9 SER A 295 HOH A 435 HOH A 543 HOH A 680 SITE 3 CC2 9 HOH A 732 CRYST1 53.197 73.527 88.037 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018798 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013600 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011359 0.00000