data_4LDF # _entry.id 4LDF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LDF pdb_00004ldf 10.2210/pdb4ldf/pdb RCSB RCSB080490 ? ? WWPDB D_1000080490 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-24 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4LDF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wernimont, A.K.' 1 'Loppnau, P.' 2 'Fonseca, M.' 3 'Knapp, S.' 4 'Tempel, W.' 5 'Bountra, C.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Hui, R.' 9 'Mottaghi, K.' 10 'Structural Genomics Consortium (SGC)' 11 # _citation.id primary _citation.title 'Crystal Structure of CpBRD2 from cryptosporidium, cgd3_3190' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wernimont, A.K.' 1 ? primary 'Loppnau, P.' 2 ? primary 'Fonseca, M.' 3 ? primary 'Knapp, S.' 4 ? primary 'Tempel, W.' 5 ? primary 'Bountra, C.' 6 ? primary 'Arrowsmith, C.H.' 7 ? primary 'Edwards, A.M.' 8 ? primary 'Hui, R.' 9 ? primary 'Mottaghi, K.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GCN5 like acetylase + bromodomain' 13795.596 2 ? ? 'unp residue 541-655' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 4 water nat water 18.015 107 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GIDPVEQSKVDLSMNDQIWQLLDTLSRHENAWPFRKPVSIGEASDYYEIIKEPTDIQTMKRKAKNKEYKTLSEFSSELKR MFDNCRFYNAKNTIYTKYANQLEAFIWPMLQTIQES ; _entity_poly.pdbx_seq_one_letter_code_can ;GIDPVEQSKVDLSMNDQIWQLLDTLSRHENAWPFRKPVSIGEASDYYEIIKEPTDIQTMKRKAKNKEYKTLSEFSSELKR MFDNCRFYNAKNTIYTKYANQLEAFIWPMLQTIQES ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 ASP n 1 4 PRO n 1 5 VAL n 1 6 GLU n 1 7 GLN n 1 8 SER n 1 9 LYS n 1 10 VAL n 1 11 ASP n 1 12 LEU n 1 13 SER n 1 14 MET n 1 15 ASN n 1 16 ASP n 1 17 GLN n 1 18 ILE n 1 19 TRP n 1 20 GLN n 1 21 LEU n 1 22 LEU n 1 23 ASP n 1 24 THR n 1 25 LEU n 1 26 SER n 1 27 ARG n 1 28 HIS n 1 29 GLU n 1 30 ASN n 1 31 ALA n 1 32 TRP n 1 33 PRO n 1 34 PHE n 1 35 ARG n 1 36 LYS n 1 37 PRO n 1 38 VAL n 1 39 SER n 1 40 ILE n 1 41 GLY n 1 42 GLU n 1 43 ALA n 1 44 SER n 1 45 ASP n 1 46 TYR n 1 47 TYR n 1 48 GLU n 1 49 ILE n 1 50 ILE n 1 51 LYS n 1 52 GLU n 1 53 PRO n 1 54 THR n 1 55 ASP n 1 56 ILE n 1 57 GLN n 1 58 THR n 1 59 MET n 1 60 LYS n 1 61 ARG n 1 62 LYS n 1 63 ALA n 1 64 LYS n 1 65 ASN n 1 66 LYS n 1 67 GLU n 1 68 TYR n 1 69 LYS n 1 70 THR n 1 71 LEU n 1 72 SER n 1 73 GLU n 1 74 PHE n 1 75 SER n 1 76 SER n 1 77 GLU n 1 78 LEU n 1 79 LYS n 1 80 ARG n 1 81 MET n 1 82 PHE n 1 83 ASP n 1 84 ASN n 1 85 CYS n 1 86 ARG n 1 87 PHE n 1 88 TYR n 1 89 ASN n 1 90 ALA n 1 91 LYS n 1 92 ASN n 1 93 THR n 1 94 ILE n 1 95 TYR n 1 96 THR n 1 97 LYS n 1 98 TYR n 1 99 ALA n 1 100 ASN n 1 101 GLN n 1 102 LEU n 1 103 GLU n 1 104 ALA n 1 105 PHE n 1 106 ILE n 1 107 TRP n 1 108 PRO n 1 109 MET n 1 110 LEU n 1 111 GLN n 1 112 THR n 1 113 ILE n 1 114 GLN n 1 115 GLU n 1 116 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene cgd3_3190 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Iowa II' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cryptosporidium parvum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 353152 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet15mlh _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ILE 2 1 ? ? ? A . n A 1 3 ASP 3 2 ? ? ? A . n A 1 4 PRO 4 3 ? ? ? A . n A 1 5 VAL 5 4 ? ? ? A . n A 1 6 GLU 6 5 ? ? ? A . n A 1 7 GLN 7 6 ? ? ? A . n A 1 8 SER 8 7 ? ? ? A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 SER 13 12 12 SER SER A . n A 1 14 MET 14 13 13 MET MET A . n A 1 15 ASN 15 14 14 ASN ASN A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 GLN 17 16 16 GLN GLN A . n A 1 18 ILE 18 17 17 ILE ILE A . n A 1 19 TRP 19 18 18 TRP TRP A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 ALA 31 30 30 ALA ALA A . n A 1 32 TRP 32 31 31 TRP TRP A . n A 1 33 PRO 33 32 32 PRO PRO A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 ARG 35 34 34 ARG ARG A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 TYR 46 45 45 TYR TYR A . n A 1 47 TYR 47 46 46 TYR TYR A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 PRO 53 52 52 PRO PRO A . n A 1 54 THR 54 53 53 THR THR A . n A 1 55 ASP 55 54 54 ASP ASP A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 GLN 57 56 56 GLN GLN A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 MET 59 58 58 MET MET A . n A 1 60 LYS 60 59 59 LYS LYS A . n A 1 61 ARG 61 60 60 ARG ARG A . n A 1 62 LYS 62 61 61 LYS LYS A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 GLU 67 66 66 GLU GLU A . n A 1 68 TYR 68 67 67 TYR TYR A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 PHE 74 73 73 PHE PHE A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 SER 76 75 75 SER SER A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 LYS 79 78 78 LYS LYS A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 MET 81 80 80 MET MET A . n A 1 82 PHE 82 81 81 PHE PHE A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ASN 84 83 83 ASN ASN A . n A 1 85 CYS 85 84 84 CYS CYS A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 PHE 87 86 86 PHE PHE A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 ASN 89 88 88 ASN ASN A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 ASN 92 91 91 ASN ASN A . n A 1 93 THR 93 92 92 THR THR A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 TYR 95 94 94 TYR TYR A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 TYR 98 97 97 TYR TYR A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 ASN 100 99 99 ASN ASN A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 GLU 103 102 102 GLU GLU A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 PHE 105 104 104 PHE PHE A . n A 1 106 ILE 106 105 105 ILE ILE A . n A 1 107 TRP 107 106 106 TRP TRP A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 MET 109 108 108 MET MET A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 THR 112 111 111 THR THR A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 GLN 114 113 113 GLN GLN A . n A 1 115 GLU 115 114 114 GLU GLU A . n A 1 116 SER 116 115 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 ILE 2 1 ? ? ? B . n B 1 3 ASP 3 2 ? ? ? B . n B 1 4 PRO 4 3 ? ? ? B . n B 1 5 VAL 5 4 ? ? ? B . n B 1 6 GLU 6 5 ? ? ? B . n B 1 7 GLN 7 6 ? ? ? B . n B 1 8 SER 8 7 ? ? ? B . n B 1 9 LYS 9 8 ? ? ? B . n B 1 10 VAL 10 9 9 VAL VAL B . n B 1 11 ASP 11 10 10 ASP ASP B . n B 1 12 LEU 12 11 11 LEU LEU B . n B 1 13 SER 13 12 12 SER SER B . n B 1 14 MET 14 13 13 MET MET B . n B 1 15 ASN 15 14 14 ASN ASN B . n B 1 16 ASP 16 15 15 ASP ASP B . n B 1 17 GLN 17 16 16 GLN GLN B . n B 1 18 ILE 18 17 17 ILE ILE B . n B 1 19 TRP 19 18 18 TRP TRP B . n B 1 20 GLN 20 19 19 GLN GLN B . n B 1 21 LEU 21 20 20 LEU LEU B . n B 1 22 LEU 22 21 21 LEU LEU B . n B 1 23 ASP 23 22 22 ASP ASP B . n B 1 24 THR 24 23 23 THR THR B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 SER 26 25 25 SER SER B . n B 1 27 ARG 27 26 26 ARG ARG B . n B 1 28 HIS 28 27 27 HIS HIS B . n B 1 29 GLU 29 28 28 GLU GLU B . n B 1 30 ASN 30 29 29 ASN ASN B . n B 1 31 ALA 31 30 30 ALA ALA B . n B 1 32 TRP 32 31 31 TRP TRP B . n B 1 33 PRO 33 32 32 PRO PRO B . n B 1 34 PHE 34 33 33 PHE PHE B . n B 1 35 ARG 35 34 34 ARG ARG B . n B 1 36 LYS 36 35 35 LYS LYS B . n B 1 37 PRO 37 36 36 PRO PRO B . n B 1 38 VAL 38 37 37 VAL VAL B . n B 1 39 SER 39 38 38 SER SER B . n B 1 40 ILE 40 39 39 ILE ILE B . n B 1 41 GLY 41 40 40 GLY GLY B . n B 1 42 GLU 42 41 41 GLU GLU B . n B 1 43 ALA 43 42 42 ALA ALA B . n B 1 44 SER 44 43 43 SER SER B . n B 1 45 ASP 45 44 44 ASP ASP B . n B 1 46 TYR 46 45 45 TYR TYR B . n B 1 47 TYR 47 46 46 TYR TYR B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 ILE 49 48 48 ILE ILE B . n B 1 50 ILE 50 49 49 ILE ILE B . n B 1 51 LYS 51 50 50 LYS LYS B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 PRO 53 52 52 PRO PRO B . n B 1 54 THR 54 53 53 THR THR B . n B 1 55 ASP 55 54 54 ASP ASP B . n B 1 56 ILE 56 55 55 ILE ILE B . n B 1 57 GLN 57 56 56 GLN GLN B . n B 1 58 THR 58 57 57 THR THR B . n B 1 59 MET 59 58 58 MET MET B . n B 1 60 LYS 60 59 59 LYS LYS B . n B 1 61 ARG 61 60 60 ARG ARG B . n B 1 62 LYS 62 61 61 LYS LYS B . n B 1 63 ALA 63 62 62 ALA ALA B . n B 1 64 LYS 64 63 63 LYS LYS B . n B 1 65 ASN 65 64 64 ASN ASN B . n B 1 66 LYS 66 65 65 LYS LYS B . n B 1 67 GLU 67 66 66 GLU GLU B . n B 1 68 TYR 68 67 67 TYR TYR B . n B 1 69 LYS 69 68 68 LYS LYS B . n B 1 70 THR 70 69 69 THR THR B . n B 1 71 LEU 71 70 70 LEU LEU B . n B 1 72 SER 72 71 71 SER SER B . n B 1 73 GLU 73 72 72 GLU GLU B . n B 1 74 PHE 74 73 73 PHE PHE B . n B 1 75 SER 75 74 74 SER SER B . n B 1 76 SER 76 75 75 SER SER B . n B 1 77 GLU 77 76 76 GLU GLU B . n B 1 78 LEU 78 77 77 LEU LEU B . n B 1 79 LYS 79 78 78 LYS LYS B . n B 1 80 ARG 80 79 79 ARG ARG B . n B 1 81 MET 81 80 80 MET MET B . n B 1 82 PHE 82 81 81 PHE PHE B . n B 1 83 ASP 83 82 82 ASP ASP B . n B 1 84 ASN 84 83 83 ASN ASN B . n B 1 85 CYS 85 84 84 CYS CYS B . n B 1 86 ARG 86 85 85 ARG ARG B . n B 1 87 PHE 87 86 86 PHE PHE B . n B 1 88 TYR 88 87 87 TYR TYR B . n B 1 89 ASN 89 88 88 ASN ASN B . n B 1 90 ALA 90 89 89 ALA ALA B . n B 1 91 LYS 91 90 90 LYS LYS B . n B 1 92 ASN 92 91 91 ASN ASN B . n B 1 93 THR 93 92 92 THR THR B . n B 1 94 ILE 94 93 93 ILE ILE B . n B 1 95 TYR 95 94 94 TYR TYR B . n B 1 96 THR 96 95 95 THR THR B . n B 1 97 LYS 97 96 96 LYS LYS B . n B 1 98 TYR 98 97 97 TYR TYR B . n B 1 99 ALA 99 98 98 ALA ALA B . n B 1 100 ASN 100 99 99 ASN ASN B . n B 1 101 GLN 101 100 100 GLN GLN B . n B 1 102 LEU 102 101 101 LEU LEU B . n B 1 103 GLU 103 102 102 GLU GLU B . n B 1 104 ALA 104 103 103 ALA ALA B . n B 1 105 PHE 105 104 104 PHE PHE B . n B 1 106 ILE 106 105 105 ILE ILE B . n B 1 107 TRP 107 106 106 TRP TRP B . n B 1 108 PRO 108 107 107 PRO PRO B . n B 1 109 MET 109 108 108 MET MET B . n B 1 110 LEU 110 109 109 LEU LEU B . n B 1 111 GLN 111 110 110 GLN GLN B . n B 1 112 THR 112 111 111 THR THR B . n B 1 113 ILE 113 112 112 ILE ILE B . n B 1 114 GLN 114 113 113 GLN GLN B . n B 1 115 GLU 115 114 114 GLU GLU B . n B 1 116 SER 116 115 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 201 1 GOL GOL A . D 2 GOL 1 201 1 GOL GOL B . E 3 UNX 1 202 1 UNX UNX B . F 4 HOH 1 301 3 HOH HOH A . F 4 HOH 2 302 4 HOH HOH A . F 4 HOH 3 303 5 HOH HOH A . F 4 HOH 4 304 9 HOH HOH A . F 4 HOH 5 305 12 HOH HOH A . F 4 HOH 6 306 13 HOH HOH A . F 4 HOH 7 307 14 HOH HOH A . F 4 HOH 8 308 15 HOH HOH A . F 4 HOH 9 309 16 HOH HOH A . F 4 HOH 10 310 17 HOH HOH A . F 4 HOH 11 311 18 HOH HOH A . F 4 HOH 12 312 21 HOH HOH A . F 4 HOH 13 313 23 HOH HOH A . F 4 HOH 14 314 25 HOH HOH A . F 4 HOH 15 315 26 HOH HOH A . F 4 HOH 16 316 27 HOH HOH A . F 4 HOH 17 317 28 HOH HOH A . F 4 HOH 18 318 30 HOH HOH A . F 4 HOH 19 319 35 HOH HOH A . F 4 HOH 20 320 44 HOH HOH A . F 4 HOH 21 321 46 HOH HOH A . F 4 HOH 22 322 47 HOH HOH A . F 4 HOH 23 323 48 HOH HOH A . F 4 HOH 24 324 49 HOH HOH A . F 4 HOH 25 325 50 HOH HOH A . F 4 HOH 26 326 51 HOH HOH A . F 4 HOH 27 327 52 HOH HOH A . F 4 HOH 28 328 53 HOH HOH A . F 4 HOH 29 329 54 HOH HOH A . F 4 HOH 30 330 69 HOH HOH A . F 4 HOH 31 331 70 HOH HOH A . F 4 HOH 32 332 71 HOH HOH A . F 4 HOH 33 333 75 HOH HOH A . F 4 HOH 34 334 79 HOH HOH A . F 4 HOH 35 335 80 HOH HOH A . F 4 HOH 36 336 81 HOH HOH A . F 4 HOH 37 337 82 HOH HOH A . F 4 HOH 38 338 83 HOH HOH A . F 4 HOH 39 339 84 HOH HOH A . F 4 HOH 40 340 85 HOH HOH A . F 4 HOH 41 341 86 HOH HOH A . F 4 HOH 42 342 87 HOH HOH A . F 4 HOH 43 343 88 HOH HOH A . F 4 HOH 44 344 89 HOH HOH A . F 4 HOH 45 345 90 HOH HOH A . F 4 HOH 46 346 91 HOH HOH A . F 4 HOH 47 347 92 HOH HOH A . F 4 HOH 48 348 103 HOH HOH A . F 4 HOH 49 349 104 HOH HOH A . F 4 HOH 50 350 105 HOH HOH A . F 4 HOH 51 351 106 HOH HOH A . F 4 HOH 52 352 107 HOH HOH A . F 4 HOH 53 353 109 HOH HOH A . F 4 HOH 54 354 112 HOH HOH A . F 4 HOH 55 355 113 HOH HOH A . F 4 HOH 56 356 118 HOH HOH A . F 4 HOH 57 357 119 HOH HOH A . G 4 HOH 1 301 6 HOH HOH B . G 4 HOH 2 302 7 HOH HOH B . G 4 HOH 3 303 10 HOH HOH B . G 4 HOH 4 304 11 HOH HOH B . G 4 HOH 5 305 19 HOH HOH B . G 4 HOH 6 306 20 HOH HOH B . G 4 HOH 7 307 24 HOH HOH B . G 4 HOH 8 308 29 HOH HOH B . G 4 HOH 9 309 31 HOH HOH B . G 4 HOH 10 310 32 HOH HOH B . G 4 HOH 11 311 33 HOH HOH B . G 4 HOH 12 312 36 HOH HOH B . G 4 HOH 13 313 37 HOH HOH B . G 4 HOH 14 314 38 HOH HOH B . G 4 HOH 15 315 39 HOH HOH B . G 4 HOH 16 316 41 HOH HOH B . G 4 HOH 17 317 42 HOH HOH B . G 4 HOH 18 318 55 HOH HOH B . G 4 HOH 19 319 56 HOH HOH B . G 4 HOH 20 320 57 HOH HOH B . G 4 HOH 21 321 58 HOH HOH B . G 4 HOH 22 322 59 HOH HOH B . G 4 HOH 23 323 60 HOH HOH B . G 4 HOH 24 324 61 HOH HOH B . G 4 HOH 25 325 62 HOH HOH B . G 4 HOH 26 326 63 HOH HOH B . G 4 HOH 27 327 66 HOH HOH B . G 4 HOH 28 328 67 HOH HOH B . G 4 HOH 29 329 68 HOH HOH B . G 4 HOH 30 330 72 HOH HOH B . G 4 HOH 31 331 76 HOH HOH B . G 4 HOH 32 332 77 HOH HOH B . G 4 HOH 33 333 78 HOH HOH B . G 4 HOH 34 334 93 HOH HOH B . G 4 HOH 35 335 94 HOH HOH B . G 4 HOH 36 336 95 HOH HOH B . G 4 HOH 37 337 96 HOH HOH B . G 4 HOH 38 338 97 HOH HOH B . G 4 HOH 39 339 98 HOH HOH B . G 4 HOH 40 340 99 HOH HOH B . G 4 HOH 41 341 100 HOH HOH B . G 4 HOH 42 342 101 HOH HOH B . G 4 HOH 43 343 102 HOH HOH B . G 4 HOH 44 344 108 HOH HOH B . G 4 HOH 45 345 110 HOH HOH B . G 4 HOH 46 346 111 HOH HOH B . G 4 HOH 47 347 114 HOH HOH B . G 4 HOH 48 348 115 HOH HOH B . G 4 HOH 49 349 116 HOH HOH B . G 4 HOH 50 350 117 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 8 ? CG ? A LYS 9 CG 2 1 Y 1 A LYS 8 ? CD ? A LYS 9 CD 3 1 Y 1 A LYS 8 ? CE ? A LYS 9 CE 4 1 Y 1 A LYS 8 ? NZ ? A LYS 9 NZ 5 1 Y 1 A VAL 9 ? CG1 ? A VAL 10 CG1 6 1 Y 1 A VAL 9 ? CG2 ? A VAL 10 CG2 7 1 Y 1 A LYS 35 ? CG ? A LYS 36 CG 8 1 Y 1 A LYS 35 ? CD ? A LYS 36 CD 9 1 Y 1 A LYS 35 ? CE ? A LYS 36 CE 10 1 Y 1 A LYS 35 ? NZ ? A LYS 36 NZ 11 1 Y 1 A GLU 41 ? CG ? A GLU 42 CG 12 1 Y 1 A GLU 41 ? CD ? A GLU 42 CD 13 1 Y 1 A GLU 41 ? OE1 ? A GLU 42 OE1 14 1 Y 1 A GLU 41 ? OE2 ? A GLU 42 OE2 15 1 Y 1 A LYS 63 ? CD ? A LYS 64 CD 16 1 Y 1 A LYS 63 ? CE ? A LYS 64 CE 17 1 Y 1 A LYS 63 ? NZ ? A LYS 64 NZ 18 1 Y 1 A LYS 68 ? CG ? A LYS 69 CG 19 1 Y 1 A LYS 68 ? CD ? A LYS 69 CD 20 1 Y 1 A LYS 68 ? CE ? A LYS 69 CE 21 1 Y 1 A LYS 68 ? NZ ? A LYS 69 NZ 22 1 Y 1 A LYS 96 ? CD ? A LYS 97 CD 23 1 Y 1 A LYS 96 ? CE ? A LYS 97 CE 24 1 Y 1 A LYS 96 ? NZ ? A LYS 97 NZ 25 1 Y 1 A GLN 113 ? CG ? A GLN 114 CG 26 1 Y 1 A GLN 113 ? CD ? A GLN 114 CD 27 1 Y 1 A GLN 113 ? OE1 ? A GLN 114 OE1 28 1 Y 1 A GLN 113 ? NE2 ? A GLN 114 NE2 29 1 Y 1 B VAL 9 ? CG1 ? B VAL 10 CG1 30 1 Y 1 B VAL 9 ? CG2 ? B VAL 10 CG2 31 1 Y 1 B LYS 68 ? CG ? B LYS 69 CG 32 1 Y 1 B LYS 68 ? CD ? B LYS 69 CD 33 1 Y 1 B LYS 68 ? CE ? B LYS 69 CE 34 1 Y 1 B LYS 68 ? NZ ? B LYS 69 NZ 35 1 Y 1 B LYS 90 ? CG ? B LYS 91 CG 36 1 Y 1 B LYS 90 ? CD ? B LYS 91 CD 37 1 Y 1 B LYS 90 ? CE ? B LYS 91 CE 38 1 Y 1 B LYS 90 ? NZ ? B LYS 91 NZ 39 1 Y 1 B GLN 113 ? CG ? B GLN 114 CG 40 1 Y 1 B GLN 113 ? CD ? B GLN 114 CD 41 1 Y 1 B GLN 113 ? OE1 ? B GLN 114 OE1 42 1 Y 1 B GLN 113 ? NE2 ? B GLN 114 NE2 43 1 Y 1 B GLU 114 ? CG ? B GLU 115 CG 44 1 Y 1 B GLU 114 ? CD ? B GLU 115 CD 45 1 Y 1 B GLU 114 ? OE1 ? B GLU 115 OE1 46 1 Y 1 B GLU 114 ? OE2 ? B GLU 115 OE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.5.1 'Fri Jul 6 07:21:42 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 BUSTER-TNT . ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _cell.length_a 37.892 _cell.length_b 44.642 _cell.length_c 59.537 _cell.angle_alpha 90.000 _cell.angle_beta 96.500 _cell.angle_gamma 90.000 _cell.entry_id 4LDF _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4LDF _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4LDF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 32.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;30 % PEG 2K MME 0.1 M Potassium thiocyanate 15% glycerol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2013-04-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4LDF _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 13557 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_netI_over_sigmaI 7.300 _reflns.pdbx_chi_squared 1.536 _reflns.pdbx_redundancy 3.400 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 13570 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.000 2.030 ? ? ? 0.756 ? ? 1.183 3.300 ? 671 99.400 1 1 2.030 2.070 ? ? ? 0.697 ? ? 1.190 3.300 ? 660 99.700 2 1 2.070 2.110 ? ? ? 0.603 ? ? 1.206 3.400 ? 696 99.700 3 1 2.110 2.150 ? ? ? 0.495 ? ? 1.300 3.400 ? 646 99.700 4 1 2.150 2.200 ? ? ? 0.469 ? ? 1.338 3.400 ? 675 99.900 5 1 2.200 2.250 ? ? ? 0.385 ? ? 1.332 3.400 ? 680 100.000 6 1 2.250 2.310 ? ? ? 0.351 ? ? 1.470 3.400 ? 665 99.800 7 1 2.310 2.370 ? ? ? 0.298 ? ? 1.475 3.400 ? 681 100.000 8 1 2.370 2.440 ? ? ? 0.263 ? ? 1.564 3.400 ? 662 100.000 9 1 2.440 2.520 ? ? ? 0.245 ? ? 1.441 3.500 ? 679 100.000 10 1 2.520 2.610 ? ? ? 0.231 ? ? 1.522 3.400 ? 664 100.000 11 1 2.610 2.710 ? ? ? 0.196 ? ? 1.484 3.500 ? 691 100.000 12 1 2.710 2.840 ? ? ? 0.156 ? ? 1.653 3.500 ? 673 100.000 13 1 2.840 2.990 ? ? ? 0.129 ? ? 1.576 3.500 ? 685 100.000 14 1 2.990 3.170 ? ? ? 0.101 ? ? 1.665 3.500 ? 676 100.000 15 1 3.170 3.420 ? ? ? 0.078 ? ? 1.737 3.500 ? 677 100.000 16 1 3.420 3.760 ? ? ? 0.056 ? ? 1.699 3.500 ? 690 100.000 17 1 3.760 4.310 ? ? ? 0.045 ? ? 1.654 3.500 ? 677 100.000 18 1 4.310 5.430 ? ? ? 0.049 ? ? 1.833 3.500 ? 703 100.000 19 1 5.430 50.000 ? ? ? 0.052 ? ? 2.278 3.400 ? 706 99.000 20 1 # _refine.entry_id 4LDF _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 33.5300 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8600 _refine.ls_number_reflns_obs 13518 _refine.ls_number_reflns_all 13536 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all .1864 _refine.ls_R_factor_obs 0.1864 _refine.ls_R_factor_R_work 0.1844 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2255 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9600 _refine.ls_number_reflns_R_free 670 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.2892 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -11.0241 _refine.aniso_B[2][2] 8.7506 _refine.aniso_B[3][3] 2.2735 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.9346 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9214 _refine.correlation_coeff_Fo_to_Fc_free 0.8924 _refine.overall_SU_R_Cruickshank_DPI 0.2100 _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 81.530 _refine.B_iso_min 6.200 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4LDF _refine_analyze.Luzzati_coordinate_error_obs 0.215 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1755 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 1875 _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 33.5300 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 654 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 54 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 261 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 1847 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 0 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 246 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 2328 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 1847 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 2504 1.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 2.580 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 17.180 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.0000 _refine_ls_shell.d_res_low 2.1600 _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.percent_reflns_obs 99.8600 _refine_ls_shell.number_reflns_R_work 2601 _refine_ls_shell.R_factor_all 0.2103 _refine_ls_shell.R_factor_R_work 0.2085 _refine_ls_shell.R_factor_R_free 0.2399 _refine_ls_shell.percent_reflns_R_free 5.4200 _refine_ls_shell.number_reflns_R_free 149 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2750 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4LDF _struct.title 'Crystal Structure of CpBRD2 from cryptosporidium, cgd3_3190' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LDF _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'Structural Genomics Consortium, SGC, bromodomain, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5CUE2_CRYPI _struct_ref.pdbx_db_accession Q5CUE2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IDPVEQSKVDLSMNDQIWQLLDTLSRHENAWPFRKPVSIGEASDYYEIIKEPTDIQTMKRKAKNKEYKTLSEFSSELKRM FDNCRFYNAKNTIYTKYANQLEAFIWPMLQTIQES ; _struct_ref.pdbx_align_begin 541 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LDF A 2 ? 116 ? Q5CUE2 541 ? 655 ? 1 115 2 1 4LDF B 2 ? 116 ? Q5CUE2 541 ? 655 ? 1 115 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LDF GLY A 1 ? UNP Q5CUE2 ? ? 'expression tag' 0 1 2 4LDF GLY B 1 ? UNP Q5CUE2 ? ? 'expression tag' 0 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1750 ? 3 MORE -10 ? 3 'SSA (A^2)' 11420 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G 3 1 A,C,F 3 2 B,D,E,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_758 -x+2,y+1/2,-z+3 -1.0000000000 0.0000000000 0.0000000000 55.5646607857 0.0000000000 1.0000000000 0.0000000000 22.3210000000 0.0000000000 0.0000000000 -1.0000000000 177.4628627143 # _struct_biol.id 1 _struct_biol.details 'AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? HIS A 28 ? SER A 12 HIS A 27 1 ? 16 HELX_P HELX_P2 2 GLU A 29 ? ARG A 35 ? GLU A 28 ARG A 34 5 ? 7 HELX_P HELX_P3 3 ASP A 45 ? ILE A 50 ? ASP A 44 ILE A 49 1 ? 6 HELX_P HELX_P4 4 ASP A 55 ? ASN A 65 ? ASP A 54 ASN A 64 1 ? 11 HELX_P HELX_P5 5 THR A 70 ? ASN A 89 ? THR A 69 ASN A 88 1 ? 20 HELX_P HELX_P6 6 ASN A 92 ? GLN A 111 ? ASN A 91 GLN A 110 1 ? 20 HELX_P HELX_P7 7 SER B 13 ? HIS B 28 ? SER B 12 HIS B 27 1 ? 16 HELX_P HELX_P8 8 GLU B 29 ? ARG B 35 ? GLU B 28 ARG B 34 5 ? 7 HELX_P HELX_P9 9 ASP B 45 ? ILE B 50 ? ASP B 44 ILE B 49 1 ? 6 HELX_P HELX_P10 10 ASP B 55 ? ASN B 65 ? ASP B 54 ASN B 64 1 ? 11 HELX_P HELX_P11 11 THR B 70 ? ASN B 89 ? THR B 69 ASN B 88 1 ? 20 HELX_P HELX_P12 12 ASN B 92 ? GLN B 111 ? ASN B 91 GLN B 110 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 201 ? 6 'BINDING SITE FOR RESIDUE GOL A 201' AC2 Software B GOL 201 ? 4 'BINDING SITE FOR RESIDUE GOL B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PRO A 33 ? PRO A 32 . ? 1_555 ? 2 AC1 6 TYR A 88 ? TYR A 87 . ? 1_555 ? 3 AC1 6 ASN A 89 ? ASN A 88 . ? 1_555 ? 4 AC1 6 TYR A 95 ? TYR A 94 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH A 343 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 355 . ? 1_555 ? 7 AC2 4 TYR B 88 ? TYR B 87 . ? 1_555 ? 8 AC2 4 ASN B 89 ? ASN B 88 . ? 1_555 ? 9 AC2 4 TYR B 95 ? TYR B 94 . ? 1_555 ? 10 AC2 4 HOH G . ? HOH B 332 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 42 ? ? -152.68 84.83 2 1 THR A 92 ? ? 71.18 175.57 3 1 ASN B 91 ? A -126.79 -165.16 4 1 THR B 92 ? ? 73.56 170.13 5 1 THR B 92 ? ? 76.74 170.13 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # _pdbx_phasing_MR.entry_id 4LDF _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.000 _pdbx_phasing_MR.d_res_low_rotation 33.530 _pdbx_phasing_MR.d_res_high_translation 2.000 _pdbx_phasing_MR.d_res_low_translation 33.530 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ILE 1 ? A ILE 2 3 1 Y 1 A ASP 2 ? A ASP 3 4 1 Y 1 A PRO 3 ? A PRO 4 5 1 Y 1 A VAL 4 ? A VAL 5 6 1 Y 1 A GLU 5 ? A GLU 6 7 1 Y 1 A GLN 6 ? A GLN 7 8 1 Y 1 A SER 7 ? A SER 8 9 1 Y 1 A SER 115 ? A SER 116 10 1 Y 1 B GLY 0 ? B GLY 1 11 1 Y 1 B ILE 1 ? B ILE 2 12 1 Y 1 B ASP 2 ? B ASP 3 13 1 Y 1 B PRO 3 ? B PRO 4 14 1 Y 1 B VAL 4 ? B VAL 5 15 1 Y 1 B GLU 5 ? B GLU 6 16 1 Y 1 B GLN 6 ? B GLN 7 17 1 Y 1 B SER 7 ? B SER 8 18 1 Y 1 B LYS 8 ? B LYS 9 19 1 Y 1 B SER 115 ? B SER 116 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # _atom_sites.entry_id 4LDF _atom_sites.fract_transf_matrix[1][1] 0.026391 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003007 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022400 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016905 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S U X # loop_