HEADER IMMUNE SYSTEM 26-JUN-13 4LFH TITLE CRYSTAL STRUCTURE OF 9C2 TCR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 9C2 TCR DELTA CHAIN; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 9C2 TCR GAMMA CHAIN; COMPND 7 CHAIN: G; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS NKT CELLS, GAMMADELTA TCR, CD1D, LIPID RECOGNITION, PBS-44, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.P.ULDRICH,J.LE NOURS,D.G.PELLICCI,S.GRAS,J.ROSSJOHN,D.I.GODFREY REVDAT 5 20-SEP-23 4LFH 1 REMARK HETSYN REVDAT 4 29-JUL-20 4LFH 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 06-NOV-13 4LFH 1 JRNL REVDAT 2 16-OCT-13 4LFH 1 JRNL REVDAT 1 02-OCT-13 4LFH 0 JRNL AUTH A.P.ULDRICH,J.LE NOURS,D.G.PELLICCI,N.A.GHERARDIN, JRNL AUTH 2 K.G.MCPHERSON,R.T.LIM,O.PATEL,T.BEDDOE,S.GRAS,J.ROSSJOHN, JRNL AUTH 3 D.I.GODFREY JRNL TITL CD1D-LIPID ANTIGEN RECOGNITION BY THE GAMMA DELTA TCR. JRNL REF NAT.IMMUNOL. V. 14 1137 2013 JRNL REFN ISSN 1529-2908 JRNL PMID 24076636 JRNL DOI 10.1038/NI.2713 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1457 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.39 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2964 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2188 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2828 REMARK 3 BIN R VALUE (WORKING SET) : 0.2173 REMARK 3 BIN FREE R VALUE : 0.2517 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.59 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3397 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.27740 REMARK 3 B22 (A**2) : -2.27740 REMARK 3 B33 (A**2) : 4.55490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.338 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.229 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.197 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.219 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.195 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3537 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4801 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1625 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 80 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 502 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3537 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 477 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3785 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.18 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.65 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.18 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -41.5036 -8.5393 -29.9210 REMARK 3 T TENSOR REMARK 3 T11: 0.1110 T22: -0.0845 REMARK 3 T33: -0.1972 T12: 0.0586 REMARK 3 T13: 0.0876 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 3.2085 L22: 1.3123 REMARK 3 L33: 0.5598 L12: -0.6126 REMARK 3 L13: 1.1046 L23: -0.7011 REMARK 3 S TENSOR REMARK 3 S11: 0.2780 S12: 0.4655 S13: 0.3935 REMARK 3 S21: -0.4663 S22: -0.2839 S23: -0.2080 REMARK 3 S31: 0.2160 S32: 0.2403 S33: 0.0059 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { G|* } REMARK 3 ORIGIN FOR THE GROUP (A): -37.6818 -18.5813 -13.7938 REMARK 3 T TENSOR REMARK 3 T11: 0.0366 T22: -0.0157 REMARK 3 T33: -0.0880 T12: -0.0734 REMARK 3 T13: 0.0527 T23: -0.0802 REMARK 3 L TENSOR REMARK 3 L11: 2.4439 L22: 0.6191 REMARK 3 L33: 0.3498 L12: -0.7473 REMARK 3 L13: 1.2260 L23: -0.4442 REMARK 3 S TENSOR REMARK 3 S11: 0.1209 S12: -0.2142 S13: 0.0662 REMARK 3 S21: -0.3519 S22: -0.0613 S23: -0.0634 REMARK 3 S31: 0.2130 S32: -0.1840 S33: -0.0596 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LFH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080563. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : DOUBLE SI(111) WITH SAGITTALY REMARK 200 BENT SECOND CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28824 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 83.816 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15500 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.80 REMARK 200 R MERGE FOR SHELL (I) : 0.38300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 3OMZ AND 1HXM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG300, 0.1 M SODIUM CACODYLATE, REMARK 280 PH 6.5, 0.2 M CALCIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 59.26700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.26700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.56350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.26700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 59.26700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.56350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.26700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.26700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.56350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 59.26700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.26700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.56350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU D 1 REMARK 465 THR D 2 REMARK 465 GLY D 3 REMARK 465 ALA D 4 REMARK 465 VAL D 207 REMARK 465 LYS D 208 REMARK 465 THR D 209 REMARK 465 ASP D 210 REMARK 465 SER D 211 REMARK 465 THR D 212 REMARK 465 ASP D 213 REMARK 465 HIS D 214 REMARK 465 VAL D 215 REMARK 465 LYS D 216 REMARK 465 PRO D 217 REMARK 465 LYS D 218 REMARK 465 GLU D 219 REMARK 465 THR D 220 REMARK 465 GLU D 221 REMARK 465 ASN D 222 REMARK 465 THR D 223 REMARK 465 LYS D 224 REMARK 465 GLN D 225 REMARK 465 PRO D 226 REMARK 465 SER D 227 REMARK 465 LYS D 228 REMARK 465 SER D 229 REMARK 465 ALA D 230 REMARK 465 SER D 231 REMARK 465 GLY D 232 REMARK 465 LEU D 233 REMARK 465 VAL D 234 REMARK 465 PRO D 235 REMARK 465 ARG D 236 REMARK 465 GLU G 1 REMARK 465 THR G 2 REMARK 465 GLY G 3 REMARK 465 SER G 4 REMARK 465 SER G 5 REMARK 465 ASN G 6 REMARK 465 LEU G 7 REMARK 465 GLU G 8 REMARK 465 GLY G 9 REMARK 465 GLY G 104 REMARK 465 ASN G 105 REMARK 465 PRO G 106 REMARK 465 LYS G 107 REMARK 465 THR G 108 REMARK 465 HIS G 109 REMARK 465 TYR G 110 REMARK 465 MET G 239 REMARK 465 ASP G 240 REMARK 465 PRO G 241 REMARK 465 LYS G 242 REMARK 465 ASP G 243 REMARK 465 ASN G 244 REMARK 465 ALA G 245 REMARK 465 SER G 246 REMARK 465 GLY G 247 REMARK 465 LEU G 248 REMARK 465 VAL G 249 REMARK 465 PRO G 250 REMARK 465 ARG G 251 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS G 220 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG D 19 -13.90 70.03 REMARK 500 GLN D 59 -142.82 -83.13 REMARK 500 LYS D 75 63.53 61.25 REMARK 500 ASP D 98 60.52 -117.35 REMARK 500 GLU D 144 83.55 48.32 REMARK 500 LYS D 174 -151.00 -106.38 REMARK 500 ASP D 185 32.41 -93.75 REMARK 500 ARG G 19 -3.28 71.56 REMARK 500 ASP G 102 156.38 59.29 REMARK 500 LYS G 174 61.78 -109.50 REMARK 500 ASN G 190 -115.35 59.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LHU RELATED DB: PDB DBREF 4LFH D 1 236 PDB 4LFH 4LFH 1 236 DBREF 4LFH G 1 251 PDB 4LFH 4LFH 1 251 SEQRES 1 D 236 GLU THR GLY ALA GLN LYS VAL THR GLN ALA GLN SER SER SEQRES 2 D 236 VAL SER MET PRO VAL ARG LYS ALA VAL THR LEU ASN CYS SEQRES 3 D 236 LEU TYR GLU THR SER TRP TRP SER TYR TYR ILE PHE TRP SEQRES 4 D 236 TYR LYS GLN LEU PRO SER LYS GLU MET ILE PHE LEU ILE SEQRES 5 D 236 ARG GLN GLY SER ASP GLU GLN ASN ALA LYS SER GLY ARG SEQRES 6 D 236 TYR SER VAL ASN PHE LYS LYS ALA ALA LYS SER VAL ALA SEQRES 7 D 236 LEU THR ILE SER ALA LEU GLN LEU GLU ASP SER ALA LYS SEQRES 8 D 236 TYR PHE CYS ALA LEU GLY ASP PRO GLY GLY LEU ASN THR SEQRES 9 D 236 ASP LYS LEU ILE PHE GLY LYS GLY THR ARG VAL THR VAL SEQRES 10 D 236 GLU PRO ARG SER GLN PRO HIS THR LYS PRO SER VAL PHE SEQRES 11 D 236 VAL MET LYS ASN GLY THR ASN VAL ALA CYS LEU VAL LYS SEQRES 12 D 236 GLU PHE TYR PRO LYS ASP ILE ARG ILE ASN LEU VAL SER SEQRES 13 D 236 SER LYS LYS ILE THR GLU PHE ASP PRO ALA ILE VAL ILE SEQRES 14 D 236 SER PRO SER GLY LYS TYR ASN ALA VAL LYS LEU GLY LYS SEQRES 15 D 236 TYR GLU ASP SER ASN SER VAL THR CYS SER VAL GLN HIS SEQRES 16 D 236 ASP ASN LYS THR VAL HIS SER THR ASP PHE GLU VAL LYS SEQRES 17 D 236 THR ASP SER THR ASP HIS VAL LYS PRO LYS GLU THR GLU SEQRES 18 D 236 ASN THR LYS GLN PRO SER LYS SER ALA SER GLY LEU VAL SEQRES 19 D 236 PRO ARG SEQRES 1 G 251 GLU THR GLY SER SER ASN LEU GLU GLY GLY THR LYS SER SEQRES 2 G 251 VAL THR ARG PRO THR ARG SER SER ALA GLU ILE THR CYS SEQRES 3 G 251 ASP LEU THR VAL ILE ASN ALA PHE TYR ILE HIS TRP TYR SEQRES 4 G 251 LEU HIS GLN GLU GLY LYS ALA PRO GLN ARG LEU LEU TYR SEQRES 5 G 251 TYR ASP VAL SER ASN SER LYS ASP VAL LEU GLU SER GLY SEQRES 6 G 251 LEU SER PRO GLY LYS TYR TYR THR HIS THR PRO ARG ARG SEQRES 7 G 251 TRP SER TRP ILE LEU ILE LEU ARG ASN LEU ILE GLU ASN SEQRES 8 G 251 ASP SER GLY VAL TYR TYR CYS ALA THR TRP ASP ARG GLY SEQRES 9 G 251 ASN PRO LYS THR HIS TYR TYR LYS LYS LEU PHE GLY SER SEQRES 10 G 251 GLY THR THR LEU VAL VAL THR ASP LYS GLN LEU ASP ALA SEQRES 11 G 251 ASP VAL SER PRO LYS PRO THR ILE PHE LEU PRO SER ILE SEQRES 12 G 251 ALA GLU THR LYS LEU GLN LYS ALA GLY THR TYR LEU CYS SEQRES 13 G 251 LEU LEU GLU LYS PHE PHE PRO ASP VAL ILE LYS ILE HIS SEQRES 14 G 251 TRP GLN GLU LYS LYS SER ASN THR ILE LEU GLY SER GLN SEQRES 15 G 251 GLU GLY ASN THR MET LYS THR ASN ASP THR TYR MET LYS SEQRES 16 G 251 PHE SER TRP LEU THR VAL PRO GLU GLU SER LEU ASP LYS SEQRES 17 G 251 GLU HIS ARG CYS ILE VAL ARG HIS GLU ASN ASN LYS ASN SEQRES 18 G 251 GLY VAL ASP GLN GLU ILE ILE PHE PRO PRO ILE LYS THR SEQRES 19 G 251 ASP VAL ILE THR MET ASP PRO LYS ASP ASN ALA SER GLY SEQRES 20 G 251 LEU VAL PRO ARG MODRES 4LFH ASN D 134 ASN GLYCOSYLATION SITE HET NAG A 1 14 HET NAG A 2 14 HET ACT G 301 4 HET NA G 302 1 HET NA G 303 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 NA 2(NA 1+) FORMUL 7 HOH *215(H2 O) HELIX 1 1 GLN D 85 SER D 89 5 5 HELIX 2 2 ASP D 185 VAL D 189 5 5 HELIX 3 3 THR D 203 GLU D 206 5 4 HELIX 4 4 ILE G 89 SER G 93 5 5 HELIX 5 5 SER G 142 LYS G 150 1 9 HELIX 6 6 GLU G 204 LEU G 206 5 3 HELIX 7 7 ASN G 219 VAL G 223 5 5 SHEET 1 A 2 LYS D 6 THR D 8 0 SHEET 2 A 2 LEU D 27 GLU D 29 -1 O LEU D 27 N THR D 8 SHEET 1 B 5 SER D 13 PRO D 17 0 SHEET 2 B 5 THR D 113 GLU D 118 1 O THR D 116 N VAL D 14 SHEET 3 B 5 ALA D 90 GLY D 97 -1 N ALA D 90 O VAL D 115 SHEET 4 B 5 TYR D 36 GLN D 42 -1 N GLN D 42 O LYS D 91 SHEET 5 B 5 MET D 48 GLY D 55 -1 O ILE D 49 N LYS D 41 SHEET 1 C 4 SER D 13 PRO D 17 0 SHEET 2 C 4 THR D 113 GLU D 118 1 O THR D 116 N VAL D 14 SHEET 3 C 4 ALA D 90 GLY D 97 -1 N ALA D 90 O VAL D 115 SHEET 4 C 4 LEU D 107 PHE D 109 -1 O ILE D 108 N LEU D 96 SHEET 1 D 4 VAL D 22 LEU D 24 0 SHEET 2 D 4 SER D 76 ILE D 81 -1 O LEU D 79 N LEU D 24 SHEET 3 D 4 TYR D 66 LYS D 71 -1 N SER D 67 O THR D 80 SHEET 4 D 4 LYS D 62 SER D 63 -1 N SER D 63 O TYR D 66 SHEET 1 E 4 SER D 128 ASN D 134 0 SHEET 2 E 4 ASN D 137 PHE D 145 -1 O LEU D 141 N PHE D 130 SHEET 3 E 4 TYR D 175 TYR D 183 -1 O ALA D 177 N VAL D 142 SHEET 4 E 4 LYS D 159 GLU D 162 -1 N THR D 161 O LYS D 182 SHEET 1 F 4 SER D 128 ASN D 134 0 SHEET 2 F 4 ASN D 137 PHE D 145 -1 O LEU D 141 N PHE D 130 SHEET 3 F 4 TYR D 175 TYR D 183 -1 O ALA D 177 N VAL D 142 SHEET 4 F 4 ALA D 166 ILE D 169 -1 N ALA D 166 O VAL D 178 SHEET 1 G 3 ARG D 151 VAL D 155 0 SHEET 2 G 3 THR D 190 HIS D 195 -1 O THR D 190 N VAL D 155 SHEET 3 G 3 LYS D 198 HIS D 201 -1 O VAL D 200 N VAL D 193 SHEET 1 H 6 LYS G 12 ARG G 16 0 SHEET 2 H 6 THR G 119 VAL G 123 1 O VAL G 122 N VAL G 14 SHEET 3 H 6 GLY G 94 TRP G 101 -1 N GLY G 94 O LEU G 121 SHEET 4 H 6 TYR G 35 HIS G 41 -1 N HIS G 41 O VAL G 95 SHEET 5 H 6 GLN G 48 ASP G 54 -1 O LEU G 50 N TRP G 38 SHEET 6 H 6 LYS G 59 LEU G 62 -1 O VAL G 61 N TYR G 52 SHEET 1 I 4 LYS G 12 ARG G 16 0 SHEET 2 I 4 THR G 119 VAL G 123 1 O VAL G 122 N VAL G 14 SHEET 3 I 4 GLY G 94 TRP G 101 -1 N GLY G 94 O LEU G 121 SHEET 4 I 4 LYS G 113 PHE G 115 -1 O LEU G 114 N THR G 100 SHEET 1 J 3 ALA G 22 THR G 25 0 SHEET 2 J 3 SER G 80 LEU G 85 -1 O LEU G 83 N ILE G 24 SHEET 3 J 3 TYR G 71 ARG G 77 -1 N HIS G 74 O ILE G 82 SHEET 1 K 4 LYS G 135 PHE G 139 0 SHEET 2 K 4 ALA G 151 PHE G 161 -1 O GLU G 159 N LYS G 135 SHEET 3 K 4 THR G 192 PRO G 202 -1 O SER G 197 N CYS G 156 SHEET 4 K 4 GLN G 182 GLU G 183 -1 N GLN G 182 O TRP G 198 SHEET 1 L 4 LYS G 135 PHE G 139 0 SHEET 2 L 4 ALA G 151 PHE G 161 -1 O GLU G 159 N LYS G 135 SHEET 3 L 4 THR G 192 PRO G 202 -1 O SER G 197 N CYS G 156 SHEET 4 L 4 MET G 187 THR G 189 -1 N THR G 189 O THR G 192 SHEET 1 M 3 LYS G 167 GLU G 172 0 SHEET 2 M 3 HIS G 210 ARG G 215 -1 O ILE G 213 N HIS G 169 SHEET 3 M 3 GLN G 225 PHE G 229 -1 O PHE G 229 N HIS G 210 SSBOND 1 CYS D 26 CYS D 94 1555 1555 2.62 SSBOND 2 CYS D 140 CYS D 191 1555 1555 2.31 SSBOND 3 CYS G 26 CYS G 98 1555 1555 2.87 LINK ND2 ASN D 134 C1 NAG A 1 1555 1555 1.43 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.42 CISPEP 1 ASP D 98 PRO D 99 0 2.74 CISPEP 2 TYR D 146 PRO D 147 0 4.12 CISPEP 3 PHE G 162 PRO G 163 0 -3.07 CRYST1 118.534 118.534 89.127 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008436 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011220 0.00000