HEADER TRANSFERASE/TRANSFERASE INHIBITOR 09-JUL-13 4LL0 TITLE EGFR L858R/T790M IN COMPLEX WITH PD168393 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EGFR (UNP RESIDUES 694-1022); COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1, RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE, PD168393, 34-JAB, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.H.YUN,M.J.ECK REVDAT 3 20-SEP-23 4LL0 1 REMARK SEQADV LINK REVDAT 2 09-OCT-13 4LL0 1 JRNL REVDAT 1 11-SEP-13 4LL0 0 JRNL AUTH M.RED BREWER,C.H.YUN,D.LAI,M.A.LEMMON,M.J.ECK,W.PAO JRNL TITL MECHANISM FOR ACTIVATION OF MUTATED EPIDERMAL GROWTH FACTOR JRNL TITL 2 RECEPTORS IN LUNG CANCER. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 E3595 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24019492 JRNL DOI 10.1073/PNAS.1220050110 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2809241.420 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 6478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 306 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.015 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.25 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 862 REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE : 0.4450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 53 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.061 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 251.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 66.43000 REMARK 3 B22 (A**2) : 3.57000 REMARK 3 B33 (A**2) : -70.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.57 REMARK 3 ESD FROM SIGMAA (A) : 1.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.61 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.93 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.840 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 199.6 REMARK 3 REMARK 3 NCS MODEL : NONE REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : CYS_34-JAB.PARA REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : CYS_34-JAB.TOP REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 4LL0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000080761. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6485 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2ITV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BICINE, 0.5M NACL, 18% PEG4000, REMARK 280 5MM TCEP, PH 9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.82000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.51500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.51500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 692 REMARK 465 SER A 693 REMARK 465 PRO A 694 REMARK 465 SER A 695 REMARK 465 GLY A 696 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 GLU A 866 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 HIS A 988 REMARK 465 LEU A 989 REMARK 465 PRO A 990 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 ASP A 1009 REMARK 465 ILE A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 465 GLY B 692 REMARK 465 SER B 693 REMARK 465 PRO B 694 REMARK 465 SER B 695 REMARK 465 GLY B 696 REMARK 465 GLU B 697 REMARK 465 LEU B 862 REMARK 465 GLY B 863 REMARK 465 ALA B 864 REMARK 465 GLU B 865 REMARK 465 GLU B 866 REMARK 465 LYS B 867 REMARK 465 GLU B 868 REMARK 465 TYR B 869 REMARK 465 HIS B 870 REMARK 465 ALA B 871 REMARK 465 GLU B 872 REMARK 465 GLY B 873 REMARK 465 GLY B 874 REMARK 465 LYS B 875 REMARK 465 ARG B 986 REMARK 465 MET B 987 REMARK 465 HIS B 988 REMARK 465 LEU B 989 REMARK 465 PRO B 990 REMARK 465 SER B 991 REMARK 465 PRO B 992 REMARK 465 THR B 993 REMARK 465 ASP B 994 REMARK 465 SER B 995 REMARK 465 ASN B 996 REMARK 465 PHE B 997 REMARK 465 TYR B 998 REMARK 465 ARG B 999 REMARK 465 ALA B 1000 REMARK 465 LEU B 1001 REMARK 465 MET B 1002 REMARK 465 ASP B 1003 REMARK 465 GLU B 1004 REMARK 465 GLU B 1005 REMARK 465 ASP B 1006 REMARK 465 MET B 1007 REMARK 465 ASP B 1008 REMARK 465 ASP B 1009 REMARK 465 VAL B 1010 REMARK 465 ILE B 1018 REMARK 465 PRO B 1019 REMARK 465 GLN B 1020 REMARK 465 GLN B 1021 REMARK 465 GLY B 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 697 CG CD OE1 OE2 REMARK 470 LYS A 739 CG CD CE NZ REMARK 470 GLU A 746 CG CD OE1 OE2 REMARK 470 LEU A 747 CG CD1 CD2 REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 749 CG CD OE1 OE2 REMARK 470 ARG A 836 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 862 CG CD1 CD2 REMARK 470 MET A 881 CG SD CE REMARK 470 ARG A 889 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 986 CZ NH1 NH2 REMARK 470 MET A 987 CG SD CE REMARK 470 MET A1007 CG SD CE REMARK 470 LEU A1017 CG CD1 CD2 REMARK 470 LYS B 739 CG CD CE NZ REMARK 470 GLU B 746 CG CD OE1 OE2 REMARK 470 LEU B 747 CG CD1 CD2 REMARK 470 ARG B 748 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 749 CG CD OE1 OE2 REMARK 470 GLN B 791 OE1 NE2 REMARK 470 ARG B 836 CG CD NE CZ NH1 NH2 REMARK 470 MET B 881 CG SD CE REMARK 470 ARG B 889 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 699 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 PRO A 753 C - N - CD ANGL. DEV. = -15.0 DEGREES REMARK 500 ARG A 776 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 776 NE - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 THR A 783 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 ARG A 831 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG A 831 NE - CZ - NH1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 831 NE - CZ - NH2 ANGL. DEV. = 5.8 DEGREES REMARK 500 LEU A 833 CB - CG - CD2 ANGL. DEV. = -12.1 DEGREES REMARK 500 ARG A 841 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 841 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 GLY A 857 N - CA - C ANGL. DEV. = -17.3 DEGREES REMARK 500 LEU A 861 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 PRO A 934 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG A 962 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 ARG A 962 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 962 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 LEU B 704 CB - CG - CD1 ANGL. DEV. = -10.9 DEGREES REMARK 500 ARG B 776 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG B 776 NE - CZ - NH2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 841 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 841 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 701 40.47 -100.30 REMARK 500 ILE A 715 -69.38 -103.02 REMARK 500 LEU A 782 70.12 -111.20 REMARK 500 ARG A 836 -10.91 78.86 REMARK 500 ARG A 841 21.54 -73.55 REMARK 500 THR A 854 69.81 -163.76 REMARK 500 MET A 908 7.17 -67.04 REMARK 500 ILE A 938 4.33 -63.56 REMARK 500 ASP A1006 172.75 -52.86 REMARK 500 ILE B 715 -70.84 -99.16 REMARK 500 LEU B 782 71.69 -115.49 REMARK 500 VAL B 786 135.99 -35.61 REMARK 500 ASP B 837 17.71 -144.06 REMARK 500 PRO B 848 -12.00 -48.79 REMARK 500 THR B 854 21.70 -150.59 REMARK 500 ARG B 858 -72.36 -94.33 REMARK 500 MET B 908 7.58 -67.76 REMARK 500 LYS B 929 -9.85 -57.31 REMARK 500 ILE B 938 4.21 -62.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 856 GLY A 857 -145.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE LIGAND YUN 1101 IS COVALENTLY BOUND TO THE RESIDUE CYS 797. SEE REMARK 600 ALSO LINK REMARK. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YUN A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YUN B 1101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LRM RELATED DB: PDB DBREF 4LL0 A 694 1022 UNP P00533 EGFR_HUMAN 694 1022 DBREF 4LL0 B 694 1022 UNP P00533 EGFR_HUMAN 694 1022 SEQADV 4LL0 GLY A 692 UNP P00533 EXPRESSION TAG SEQADV 4LL0 SER A 693 UNP P00533 EXPRESSION TAG SEQADV 4LL0 MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 4LL0 ARG A 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQADV 4LL0 GLY B 692 UNP P00533 EXPRESSION TAG SEQADV 4LL0 SER B 693 UNP P00533 EXPRESSION TAG SEQADV 4LL0 MET B 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 4LL0 ARG B 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQRES 1 A 331 GLY SER PRO SER GLY GLU ALA PRO ASN GLN ALA LEU LEU SEQRES 2 A 331 ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL SEQRES 3 A 331 LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU SEQRES 4 A 331 TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA SEQRES 5 A 331 ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN SEQRES 6 A 331 LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL SEQRES 7 A 331 ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU SEQRES 8 A 331 THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE SEQRES 9 A 331 GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN SEQRES 10 A 331 ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE SEQRES 11 A 331 ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL SEQRES 12 A 331 HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR SEQRES 13 A 331 PRO GLN HIS VAL LYS ILE THR ASP PHE GLY ARG ALA LYS SEQRES 14 A 331 LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY SEQRES 15 A 331 GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE SEQRES 16 A 331 LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER SEQRES 17 A 331 TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER SEQRES 18 A 331 LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER SEQRES 19 A 331 ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE SEQRES 20 A 331 CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP SEQRES 21 A 331 MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU SEQRES 22 A 331 ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG SEQRES 23 A 331 TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SEQRES 24 A 331 SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP SEQRES 25 A 331 GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR SEQRES 26 A 331 LEU ILE PRO GLN GLN GLY SEQRES 1 B 331 GLY SER PRO SER GLY GLU ALA PRO ASN GLN ALA LEU LEU SEQRES 2 B 331 ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL SEQRES 3 B 331 LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU SEQRES 4 B 331 TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA SEQRES 5 B 331 ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN SEQRES 6 B 331 LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL SEQRES 7 B 331 ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU SEQRES 8 B 331 THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE SEQRES 9 B 331 GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN SEQRES 10 B 331 ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE SEQRES 11 B 331 ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL SEQRES 12 B 331 HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR SEQRES 13 B 331 PRO GLN HIS VAL LYS ILE THR ASP PHE GLY ARG ALA LYS SEQRES 14 B 331 LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY SEQRES 15 B 331 GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE SEQRES 16 B 331 LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER SEQRES 17 B 331 TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER SEQRES 18 B 331 LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER SEQRES 19 B 331 ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE SEQRES 20 B 331 CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP SEQRES 21 B 331 MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU SEQRES 22 B 331 ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG SEQRES 23 B 331 TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SEQRES 24 B 331 SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP SEQRES 25 B 331 GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR SEQRES 26 B 331 LEU ILE PRO GLN GLN GLY HET YUN A1101 23 HET YUN B1101 23 HETNAM YUN N-{4-[(3-BROMOPHENYL)AMINO]QUINAZOLIN-6-YL}PROPANAMIDE FORMUL 3 YUN 2(C17 H15 BR N4 O) HELIX 1 1 LYS A 708 THR A 710 5 3 HELIX 2 2 SER A 752 SER A 768 1 17 HELIX 3 3 CYS A 797 HIS A 805 1 9 HELIX 4 4 GLY A 810 ARG A 831 1 22 HELIX 5 5 ALA A 839 ARG A 841 5 3 HELIX 6 6 ALA A 882 ARG A 889 1 8 HELIX 7 7 HIS A 893 MET A 908 1 16 HELIX 8 8 PRO A 919 SER A 921 5 3 HELIX 9 9 GLU A 922 LYS A 929 1 8 HELIX 10 10 THR A 940 CYS A 950 1 11 HELIX 11 11 ASP A 954 ARG A 958 5 5 HELIX 12 12 LYS A 960 ALA A 972 1 13 HELIX 13 13 ARG A 973 TYR A 978 5 6 HELIX 14 14 LYS B 708 THR B 710 5 3 HELIX 15 15 SER B 752 SER B 768 1 17 HELIX 16 16 CYS B 797 HIS B 805 1 9 HELIX 17 17 GLY B 810 ARG B 831 1 22 HELIX 18 18 ALA B 839 ARG B 841 5 3 HELIX 19 19 ALA B 882 ARG B 889 1 8 HELIX 20 20 THR B 892 MET B 908 1 17 HELIX 21 21 PRO B 919 SER B 921 5 3 HELIX 22 22 GLU B 922 LYS B 929 1 8 HELIX 23 23 THR B 940 CYS B 950 1 11 HELIX 24 24 ASP B 954 ARG B 958 5 5 HELIX 25 25 LYS B 960 ASP B 974 1 15 HELIX 26 26 PRO B 975 TYR B 978 5 4 SHEET 1 A 6 ARG A 705 LEU A 707 0 SHEET 2 A 6 LEU A 777 CYS A 781 1 O ILE A 780 N LEU A 707 SHEET 3 A 6 GLN A 787 GLN A 791 -1 O ILE A 789 N GLY A 779 SHEET 4 A 6 ILE A 740 GLU A 746 -1 N LYS A 745 O LEU A 788 SHEET 5 A 6 LYS A 728 TRP A 731 -1 N TRP A 731 O ILE A 740 SHEET 6 A 6 PHE A 712 LYS A 716 -1 N LYS A 713 O LEU A 730 SHEET 1 B 2 VAL A 843 THR A 847 0 SHEET 2 B 2 HIS A 850 ILE A 853 -1 O HIS A 850 N THR A 847 SHEET 1 C 6 ARG B 705 LEU B 707 0 SHEET 2 C 6 LEU B 777 CYS B 781 1 O ILE B 780 N LEU B 707 SHEET 3 C 6 GLN B 787 GLN B 791 -1 O GLN B 787 N CYS B 781 SHEET 4 C 6 ILE B 740 GLU B 746 -1 N LYS B 745 O LEU B 788 SHEET 5 C 6 THR B 725 TRP B 731 -1 N TRP B 731 O ILE B 740 SHEET 6 C 6 PHE B 712 SER B 720 -1 N LYS B 716 O LYS B 728 SHEET 1 D 2 VAL B 843 THR B 847 0 SHEET 2 D 2 HIS B 850 ILE B 853 -1 O HIS B 850 N THR B 847 LINK SG CYS A 797 CAN YUN A1101 1555 1555 1.83 LINK SG CYS B 797 CAN YUN B1101 1555 1555 1.83 SITE 1 AC1 10 LEU A 718 VAL A 726 ALA A 743 MET A 790 SITE 2 AC1 10 GLN A 791 LEU A 792 MET A 793 CYS A 797 SITE 3 AC1 10 ASP A 800 LEU A 844 SITE 1 AC2 10 LEU B 718 VAL B 726 ALA B 743 MET B 790 SITE 2 AC2 10 GLN B 791 LEU B 792 MET B 793 CYS B 797 SITE 3 AC2 10 ASP B 800 LEU B 844 CRYST1 61.640 72.710 167.030 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005987 0.00000