HEADER HYDROLASE/HYDROLASE INHIBITOR 15-JUL-13 4LP9 TITLE ENDOTHIAPEPSIN COMPLEXED WITH PHE-REDUCED-TYR PEPTIDE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOTHIAPEPSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 90-419; COMPND 5 SYNONYM: ASPARTATE PROTEASE; COMPND 6 EC: 3.4.23.22; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SER-LEU-PHE-HIS-PHENYLALANYL-REDUCED-PEPTIDE-BOND-TYROSYL- COMPND 9 THR-PRO; COMPND 10 CHAIN: I; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPHONECTRIA PARASITICA; SOURCE 3 ORGANISM_COMMON: CHESNUT BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5116; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES KEYWDS ASPARTIC PROTEINASE FOLD, PROTEOLYSIS, HYDROLASE (ACID PROTEINASE), KEYWDS 2 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.GUO,J.B.COOPER,S.P.WOOD REVDAT 4 15-NOV-23 4LP9 1 LINK ATOM REVDAT 3 20-SEP-23 4LP9 1 REMARK LINK REVDAT 2 19-FEB-14 4LP9 1 JRNL REVDAT 1 15-JAN-14 4LP9 0 JRNL AUTH J.GUO,J.B.COOPER,S.P.WOOD JRNL TITL THE STRUCTURE OF ENDOTHIAPEPSIN COMPLEXED WITH A PHE-TYR JRNL TITL 2 REDUCED-BOND INHIBITOR AT 1.35 ANGSTROM RESOLUTION. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 70 30 2014 JRNL REF 2 BIOL COMMUN JRNL REFN ISSN 0907-4449 JRNL PMID 24419612 JRNL DOI 10.1107/S2053230X13032974 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 66078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.125 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3576 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4318 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.3860 REMARK 3 BIN FREE R VALUE SET COUNT : 233 REMARK 3 BIN FREE R VALUE : 0.4410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2461 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 335 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.045 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.047 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.645 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2555 ; 0.022 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2291 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3460 ; 2.112 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5292 ; 1.018 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 320 ; 6.500 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;30.028 ;24.643 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 345 ;11.020 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;23.079 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 418 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2795 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 551 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1331 ; 2.059 ; 1.246 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1330 ; 1.952 ; 1.243 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1634 ; 2.466 ; 1.880 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1635 ; 2.472 ; 1.881 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1224 ; 3.814 ; 1.597 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1224 ; 3.808 ; 1.596 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1827 ; 4.011 ; 2.250 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3105 ; 5.363 ;12.720 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3105 ; 5.351 ;12.717 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4846 ; 5.698 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 138 ;42.192 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5008 ;12.406 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000080914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0435 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69622 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 28.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.57100 REMARK 200 R SYM FOR SHELL (I) : 0.57100 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: FFT REMARK 200 STARTING MODEL: PDB ENTRY 1GVX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 63% SATURATED REMARK 280 AMMONIUM SULFATE, 3 MG/ML ENZYME, 2 MM INHIBITOR (DISSOLVED REMARK 280 INITIALLY IN DMSO), PH 4.9, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.39350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE SER-LEU-PHE-HIS-PHENYLALANYL-REDUCED-PEPTIDE-BOND-TYROSYL-THR- REMARK 400 PRO IS PEPTIDE-LIKE, A MEMBER OF INHIBITOR CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: SER-LEU-PHE-HIS-PHENYLALANYL-REDUCED-PEPTIDE-BOND-TYROSYL- REMARK 400 THR-PRO REMARK 400 CHAIN: I REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 569 O HOH A 741 2.11 REMARK 500 O HOH A 646 O HOH A 708 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 110 CB SER A 110 OG -0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 265 NE - CZ - NH1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG A 265 NE - CZ - NH2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TYR A 272 CB - CG - CD1 ANGL. DEV. = 3.6 DEGREES REMARK 500 PHE A 275 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 22G I 404 CA - C - N ANGL. DEV. = 21.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS I 403 38.83 -143.68 REMARK 500 22G I 404 -172.15 -34.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 22G I 404 THR I 405 -108.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 22G I 404 40.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF SER-LEU-PHE-HIS REMARK 800 -PHENYLALANYL-REDUCED-PEPTIDE-BOND-TYROSYL- THR-PRO REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GVX RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIGAND H256. REMARK 900 RELATED ID: 1GVT RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIGAND CP-80,794. REMARK 900 RELATED ID: 1GVU RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIGAND H189. REMARK 900 RELATED ID: 1GVV RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIGAND PD-129,541. REMARK 900 RELATED ID: 1GVW RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIGAND PD-130,328. DBREF 4LP9 A -2 326 UNP P11838 CARP_CRYPA 90 419 DBREF 4LP9 I 400 406 PDB 4LP9 4LP9 400 406 SEQRES 1 A 330 SER THR GLY SER ALA THR THR THR PRO ILE ASP SER LEU SEQRES 2 A 330 ASP ASP ALA TYR ILE THR PRO VAL GLN ILE GLY THR PRO SEQRES 3 A 330 ALA GLN THR LEU ASN LEU ASP PHE ASP THR GLY SER SER SEQRES 4 A 330 ASP LEU TRP VAL PHE SER SER GLU THR THR ALA SER GLU SEQRES 5 A 330 VAL ASP GLY GLN THR ILE TYR THR PRO SER LYS SER THR SEQRES 6 A 330 THR ALA LYS LEU LEU SER GLY ALA THR TRP SER ILE SER SEQRES 7 A 330 TYR GLY ASP GLY SER SER SER SER GLY ASP VAL TYR THR SEQRES 8 A 330 ASP THR VAL SER VAL GLY GLY LEU THR VAL THR GLY GLN SEQRES 9 A 330 ALA VAL GLU SER ALA LYS LYS VAL SER SER SER PHE THR SEQRES 10 A 330 GLU ASP SER THR ILE ASP GLY LEU LEU GLY LEU ALA PHE SEQRES 11 A 330 SER THR LEU ASN THR VAL SER PRO THR GLN GLN LYS THR SEQRES 12 A 330 PHE PHE ASP ASN ALA LYS ALA SER LEU ASP SER PRO VAL SEQRES 13 A 330 PHE THR ALA ASP LEU GLY TYR HIS ALA PRO GLY THR TYR SEQRES 14 A 330 ASN PHE GLY PHE ILE ASP THR THR ALA TYR THR GLY SER SEQRES 15 A 330 ILE THR TYR THR ALA VAL SER THR LYS GLN GLY PHE TRP SEQRES 16 A 330 GLU TRP THR SER THR GLY TYR ALA VAL GLY SER GLY THR SEQRES 17 A 330 PHE LYS SER THR SER ILE ASP GLY ILE ALA ASP THR GLY SEQRES 18 A 330 THR THR LEU LEU TYR LEU PRO ALA THR VAL VAL SER ALA SEQRES 19 A 330 TYR TRP ALA GLN VAL SER GLY ALA LYS SER SER SER SER SEQRES 20 A 330 VAL GLY GLY TYR VAL PHE PRO CYS SER ALA THR LEU PRO SEQRES 21 A 330 SER PHE THR PHE GLY VAL GLY SER ALA ARG ILE VAL ILE SEQRES 22 A 330 PRO GLY ASP TYR ILE ASP PHE GLY PRO ILE SER THR GLY SEQRES 23 A 330 SER SER SER CYS PHE GLY GLY ILE GLN SER SER ALA GLY SEQRES 24 A 330 ILE GLY ILE ASN ILE PHE GLY ASP VAL ALA LEU LYS ALA SEQRES 25 A 330 ALA PHE VAL VAL PHE ASN GLY ALA THR THR PRO THR LEU SEQRES 26 A 330 GLY PHE ALA SER LYS SEQRES 1 I 7 SER LEU PHE HIS 22G THR PRO HET 22G I 404 22 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 6 HET GOL A 409 6 HETNAM 22G N-[(2S)-2-AMINO-3-PHENYLPROPYL]-L-TYROSINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 22G C18 H22 N2 O3 FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 GOL 6(C3 H8 O3) FORMUL 12 HOH *335(H2 O) HELIX 1 1 THR A 46 VAL A 50 5 5 HELIX 2 2 THR A 57 SER A 61 5 5 HELIX 3 3 SER A 108 GLU A 113 1 6 HELIX 4 4 PHE A 125 ASN A 129 5 5 HELIX 5 5 THR A 137 LYS A 143 1 7 HELIX 6 6 PRO A 224 ALA A 233 1 10 HELIX 7 7 PRO A 269 TYR A 272 5 4 HELIX 8 8 GLY A 303 LYS A 308 1 6 SHEET 1 A 9 LYS A 64 SER A 74 0 SHEET 2 A 9 SER A 80 VAL A 91 -1 O VAL A 84 N LEU A 66 SHEET 3 A 9 TYR A 14 ILE A 20 -1 N GLN A 19 O SER A 90 SHEET 4 A 9 GLY A 0 PRO A 6 -1 N THR A 5 O ILE A 15 SHEET 5 A 9 GLY A 163 PHE A 167 -1 O PHE A 167 N GLY A 0 SHEET 6 A 9 VAL A 150 ASP A 154 -1 N THR A 152 O ASN A 166 SHEET 7 A 9 PHE A 311 ASN A 315 -1 O PHE A 314 N PHE A 151 SHEET 8 A 9 THR A 320 ALA A 324 -1 O GLY A 322 N VAL A 313 SHEET 9 A 9 THR A 180 ALA A 183 -1 N THR A 180 O PHE A 323 SHEET 1 B13 LYS A 64 SER A 74 0 SHEET 2 B13 SER A 80 VAL A 91 -1 O VAL A 84 N LEU A 66 SHEET 3 B13 LEU A 94 VAL A 107 -1 O VAL A 101 N TYR A 85 SHEET 4 B13 LEU A 38 VAL A 40 1 N VAL A 40 O ALA A 104 SHEET 5 B13 GLY A 119 GLY A 122 -1 O LEU A 120 N TRP A 39 SHEET 6 B13 GLN A 25 ASP A 32 1 N ASP A 30 O GLY A 119 SHEET 7 B13 TYR A 14 ILE A 20 -1 N THR A 16 O LEU A 29 SHEET 8 B13 GLY A 0 PRO A 6 -1 N THR A 5 O ILE A 15 SHEET 9 B13 GLY A 163 PHE A 167 -1 O PHE A 167 N GLY A 0 SHEET 10 B13 VAL A 150 ASP A 154 -1 N THR A 152 O ASN A 166 SHEET 11 B13 PHE A 311 ASN A 315 -1 O PHE A 314 N PHE A 151 SHEET 12 B13 THR A 320 ALA A 324 -1 O GLY A 322 N VAL A 313 SHEET 13 B13 THR A 180 ALA A 183 -1 N THR A 180 O PHE A 323 SHEET 1 C 7 ALA A 264 ILE A 268 0 SHEET 2 C 7 PHE A 257 VAL A 261 -1 N PHE A 257 O ILE A 268 SHEET 3 C 7 GLU A 191 VAL A 199 -1 N ALA A 198 O THR A 258 SHEET 4 C 7 LYS A 204 ALA A 214 -1 O LYS A 204 N TYR A 197 SHEET 5 C 7 ASN A 300 PHE A 302 1 O PHE A 302 N ILE A 213 SHEET 6 C 7 LEU A 221 LEU A 223 -1 N TYR A 222 O ILE A 301 SHEET 7 C 7 ILE A 287 SER A 289 1 O GLN A 288 N LEU A 221 SHEET 1 D 4 LYS A 238A SER A 240 0 SHEET 2 D 4 GLY A 245 PRO A 249 -1 O GLY A 245 N SER A 240 SHEET 3 D 4 SER A 282B GLY A 285 -1 O CYS A 283 N PHE A 248 SHEET 4 D 4 ASP A 274 PRO A 277 -1 N GLY A 276 O PHE A 284 SSBOND 1 CYS A 250 CYS A 283 1555 1555 2.11 LINK C HIS I 403 N 22G I 404 1555 1555 1.38 LINK C 22G I 404 N THR I 405 1555 1555 1.45 CISPEP 1 THR A 22 PRO A 23 0 -5.23 CISPEP 2 SER A 132 PRO A 133 0 10.14 SITE 1 AC1 7 GLY A 78 SER A 79 SER A 108 SER A 109 SITE 2 AC1 7 SER A 110 HOH A 582 HOH A 687 SITE 1 AC2 7 TYR A 85 THR A 176 GLY A 177 HOH A 597 SITE 2 AC2 7 HOH A 697 HOH A 744 HOH A 789 SITE 1 AC3 8 GLY A 68 SER A 178 THR A 180 SER A 282A SITE 2 AC3 8 GOL A 406 HOH A 521 HOH A 742 HOH A 777 SITE 1 AC4 4 SER A 236 GLY A 237 ALA A 238 HOH A 570 SITE 1 AC5 3 THR A -1 SER A -2 HOH A 702 SITE 1 AC6 7 GLY A 68 THR A 70 GLY A 177 SER A 178 SITE 2 AC6 7 SO4 A 403 HOH A 814 HOH A 815 SITE 1 AC7 8 VAL A 267 PRO A 269 TYR A 272 ALA A 309 SITE 2 AC7 8 SER A 325 LYS A 326 HOH A 526 HOH A 678 SITE 1 AC8 4 ALA A 183 TRP A 192 THR A 193 ASP A 211 SITE 1 AC9 2 THR A 46 ALA A 47 SITE 1 BC1 29 ASP A 12 ASP A 30 ASP A 32 GLY A 34 SITE 2 BC1 29 ILE A 73 SER A 74 TYR A 75 GLY A 76 SITE 3 BC1 29 ASP A 77 PHE A 111 ASP A 114 ILE A 117 SITE 4 BC1 29 PHE A 189 ASP A 215 GLY A 217 THR A 218 SITE 5 BC1 29 THR A 219 TYR A 222 PHE A 284 ILE A 297 SITE 6 BC1 29 ILE A 301 HOH A 509 HOH A 811 HOH I 501 SITE 7 BC1 29 HOH I 502 HOH I 503 HOH I 504 HOH I 505 SITE 8 BC1 29 HOH I 506 CRYST1 52.620 72.787 45.113 90.00 108.54 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019004 0.000000 0.006375 0.00000 SCALE2 0.000000 0.013739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023380 0.00000