HEADER TRANSFERASE 22-JUL-13 4LS8 TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS BETA-KETOACYL-ACP SYNTHASE II TITLE 2 (FABF) IN A COVALENT COMPLEX WITH CERULENIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE II, BETA-KETOACYL- COMPND 5 ACP SYNTHASE II, KAS II; COMPND 6 EC: 2.3.1.179; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: FABF, YJAY, BSU11340; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE32L KEYWDS KASII, KETOACYL SYNTHASE, CONDENSING ENZYME, FATTY ACID ELONGATION, KEYWDS 2 CERULENIN, DRUG TARGET, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.TRAJTENBERG,N.LARRIEUX,A.BUSCHIAZZO REVDAT 3 09-OCT-24 4LS8 1 REMARK SEQADV LINK REVDAT 2 04-JUN-14 4LS8 1 JRNL REVDAT 1 02-APR-14 4LS8 0 JRNL AUTH F.TRAJTENBERG,S.ALTABE,N.LARRIEUX,F.FICARRA,D.DE MENDOZA, JRNL AUTH 2 A.BUSCHIAZZO,G.E.SCHUJMAN JRNL TITL STRUCTURAL INSIGHTS INTO BACTERIAL RESISTANCE TO CERULENIN. JRNL REF FEBS J. V. 281 2324 2014 JRNL REFN ISSN 1742-464X JRNL PMID 24641521 JRNL DOI 10.1111/FEBS.12785 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 50776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.560 REMARK 3 FREE R VALUE TEST SET COUNT : 792 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.16 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3646 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1930 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3592 REMARK 3 BIN R VALUE (WORKING SET) : 0.1921 REMARK 3 BIN FREE R VALUE : 0.2503 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.48 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 54 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6104 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 393 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.10150 REMARK 3 B22 (A**2) : -0.76930 REMARK 3 B33 (A**2) : -2.33220 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.254 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.177 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6296 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8538 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2121 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 150 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 947 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6296 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 865 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7877 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.18 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.46 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|-2 - A|413 C|1 } REMARK 3 ORIGIN FOR THE GROUP (A): 4.6340 18.0000 45.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.0056 T22: 0.0022 REMARK 3 T33: 0.0166 T12: 0.0187 REMARK 3 T13: 0.0006 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.8755 L22: 0.9498 REMARK 3 L33: 0.8895 L12: -0.1922 REMARK 3 L13: 0.2086 L23: -0.1802 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: -0.0041 S13: 0.1745 REMARK 3 S21: -0.0665 S22: -0.0528 S23: -0.0135 REMARK 3 S31: 0.0373 S32: 0.0371 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|-1 - B|413 D|1 } REMARK 3 ORIGIN FOR THE GROUP (A): 3.7730 -4.6120 62.9510 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.2038 REMARK 3 T33: 0.2124 T12: -0.0142 REMARK 3 T13: -0.0406 T23: 0.1807 REMARK 3 L TENSOR REMARK 3 L11: 1.9014 L22: 0.8652 REMARK 3 L33: 0.6198 L12: -0.2489 REMARK 3 L13: 0.1457 L23: 0.0274 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: -0.5448 S13: -0.5549 REMARK 3 S21: 0.1733 S22: 0.0402 S23: 0.0857 REMARK 3 S31: 0.2507 S32: -0.0665 S33: -0.0963 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000081020. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYER MIRRORS (VARIMAX-HF) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50824 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 29.187 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: FABF:CERULENIN COMPLEX: 15% PEG3000 , REMARK 280 PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.22000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.22000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.22000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.22000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ARG A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 MET B -12 REMARK 465 ARG B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 GLY B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A -1 CG1 CG2 CD1 REMARK 470 GLN A 0 CG CD OE1 NE2 REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 70 CD CE NZ REMARK 470 LYS A 125 CD CE NZ REMARK 470 ARG A 128 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 207 NZ REMARK 470 LYS A 216 CD CE NZ REMARK 470 LYS A 224 NZ REMARK 470 LYS A 288 CD CE NZ REMARK 470 GLU A 324 CG CD OE1 OE2 REMARK 470 LYS A 328 CD CE NZ REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 GLU A 388 CD OE1 OE2 REMARK 470 SER A 413 OG REMARK 470 ILE B -1 CG1 CG2 CD1 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 LYS B 65 CD CE NZ REMARK 470 ARG B 69 CD NE CZ NH1 NH2 REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 470 LYS B 207 CE NZ REMARK 470 LYS B 216 CD CE NZ REMARK 470 LYS B 224 CE NZ REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 LYS B 328 CE NZ REMARK 470 GLU B 373 CG CD OE1 OE2 REMARK 470 GLU B 374 OE1 OE2 REMARK 470 GLU B 383 CG CD OE1 OE2 REMARK 470 ARG B 386 CD NE CZ NH1 NH2 REMARK 470 GLU B 388 CG CD OE1 OE2 REMARK 470 GLN B 412 CG CD OE1 NE2 REMARK 470 SER B 413 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -0.46 -148.94 REMARK 500 ALA A 163 -130.15 55.99 REMARK 500 PHE A 222 -9.03 75.00 REMARK 500 ASP A 227 36.50 -141.71 REMARK 500 THR A 270 -32.38 -134.18 REMARK 500 SER A 306 30.97 83.64 REMARK 500 LEU A 342 -112.74 56.64 REMARK 500 CYS A 375 76.62 -114.29 REMARK 500 ASP A 382 -43.00 65.25 REMARK 500 ALA B 163 -131.08 55.04 REMARK 500 PHE B 222 -9.49 74.94 REMARK 500 ASP B 227 32.58 -141.84 REMARK 500 THR B 270 -33.51 -133.54 REMARK 500 SER B 306 31.18 77.42 REMARK 500 LEU B 342 -109.38 53.20 REMARK 500 CYS B 375 76.82 -114.85 REMARK 500 ASP B 382 -34.57 59.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD1 REMARK 620 2 GLY B 108 O 133.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 233 OE1 REMARK 620 2 HOH A 611 O 104.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1XG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1XG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LS5 RELATED DB: PDB REMARK 900 RELATED ID: 4LS6 RELATED DB: PDB REMARK 900 RELATED ID: 4LS7 RELATED DB: PDB DBREF 4LS8 A 1 413 UNP O34340 FABF_BACSU 1 413 DBREF 4LS8 B 1 413 UNP O34340 FABF_BACSU 1 413 SEQADV 4LS8 MET A -12 UNP O34340 INITIATING METHIONINE SEQADV 4LS8 ARG A -11 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLY A -10 UNP O34340 EXPRESSION TAG SEQADV 4LS8 SER A -9 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -8 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -7 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -6 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -5 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -4 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS A -3 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLY A -2 UNP O34340 EXPRESSION TAG SEQADV 4LS8 ILE A -1 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLN A 0 UNP O34340 EXPRESSION TAG SEQADV 4LS8 MET B -12 UNP O34340 INITIATING METHIONINE SEQADV 4LS8 ARG B -11 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLY B -10 UNP O34340 EXPRESSION TAG SEQADV 4LS8 SER B -9 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -8 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -7 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -6 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -5 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -4 UNP O34340 EXPRESSION TAG SEQADV 4LS8 HIS B -3 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLY B -2 UNP O34340 EXPRESSION TAG SEQADV 4LS8 ILE B -1 UNP O34340 EXPRESSION TAG SEQADV 4LS8 GLN B 0 UNP O34340 EXPRESSION TAG SEQRES 1 A 426 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY ILE GLN SEQRES 2 A 426 MET THR LYS LYS ARG VAL VAL VAL THR GLY LEU GLY ALA SEQRES 3 A 426 LEU SER PRO LEU GLY ASN ASP VAL ASP THR SER TRP ASN SEQRES 4 A 426 ASN ALA ILE ASN GLY VAL SER GLY ILE GLY PRO ILE THR SEQRES 5 A 426 ARG VAL ASP ALA GLU GLU TYR PRO ALA LYS VAL ALA ALA SEQRES 6 A 426 GLU LEU LYS ASP PHE ASN VAL GLU ASP TYR MET ASP LYS SEQRES 7 A 426 LYS GLU ALA ARG LYS MET ASP ARG PHE THR GLN TYR ALA SEQRES 8 A 426 VAL VAL ALA ALA LYS MET ALA VAL GLU ASP ALA ASP LEU SEQRES 9 A 426 ASN ILE THR ASP GLU ILE ALA PRO ARG VAL GLY VAL TRP SEQRES 10 A 426 VAL GLY SER GLY ILE GLY GLY LEU GLU THR LEU GLU SER SEQRES 11 A 426 GLN PHE GLU ILE PHE LEU THR LYS GLY PRO ARG ARG VAL SEQRES 12 A 426 SER PRO PHE PHE VAL PRO MET MET ILE PRO ASP MET ALA SEQRES 13 A 426 THR GLY GLN ILE SER ILE ALA LEU GLY ALA LYS GLY VAL SEQRES 14 A 426 ASN SER CYS THR VAL THR ALA CYS ALA THR GLY THR ASN SEQRES 15 A 426 SER ILE GLY ASP ALA PHE LYS VAL ILE GLN ARG GLY ASP SEQRES 16 A 426 ALA ASP VAL MET VAL THR GLY GLY THR GLU ALA PRO LEU SEQRES 17 A 426 THR ARG MET SER PHE ALA GLY PHE SER ALA ASN LYS ALA SEQRES 18 A 426 LEU SER THR ASN PRO ASP PRO LYS THR ALA SER ARG PRO SEQRES 19 A 426 PHE ASP LYS ASN ARG ASP GLY PHE VAL MET GLY GLU GLY SEQRES 20 A 426 ALA GLY ILE ILE VAL LEU GLU GLU LEU GLU HIS ALA LEU SEQRES 21 A 426 ALA ARG GLY ALA LYS ILE TYR GLY GLU ILE VAL GLY TYR SEQRES 22 A 426 GLY SER THR GLY ASP ALA TYR HIS ILE THR ALA PRO ALA SEQRES 23 A 426 GLN ASP GLY GLU GLY GLY ALA ARG ALA MET GLN GLU ALA SEQRES 24 A 426 ILE LYS ASP ALA GLY ILE ALA PRO GLU GLU ILE ASP TYR SEQRES 25 A 426 ILE ASN ALA HIS GLY THR SER THR TYR TYR ASN ASP LYS SEQRES 26 A 426 TYR GLU THR MET ALA ILE LYS THR VAL PHE GLY GLU HIS SEQRES 27 A 426 ALA HIS LYS LEU ALA VAL SER SER THR LYS SER MET THR SEQRES 28 A 426 GLY HIS LEU LEU GLY ALA ALA GLY GLY ILE GLU ALA ILE SEQRES 29 A 426 PHE SER ILE LEU ALA ILE LYS GLU GLY VAL ILE PRO PRO SEQRES 30 A 426 THR ILE ASN ILE GLN THR PRO ASP GLU GLU CYS ASP LEU SEQRES 31 A 426 ASP TYR VAL PRO ASP GLU ALA ARG ARG GLN GLU LEU ASN SEQRES 32 A 426 TYR VAL LEU SER ASN SER LEU GLY PHE GLY GLY HIS ASN SEQRES 33 A 426 ALA THR LEU ILE PHE LYS LYS TYR GLN SER SEQRES 1 B 426 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY ILE GLN SEQRES 2 B 426 MET THR LYS LYS ARG VAL VAL VAL THR GLY LEU GLY ALA SEQRES 3 B 426 LEU SER PRO LEU GLY ASN ASP VAL ASP THR SER TRP ASN SEQRES 4 B 426 ASN ALA ILE ASN GLY VAL SER GLY ILE GLY PRO ILE THR SEQRES 5 B 426 ARG VAL ASP ALA GLU GLU TYR PRO ALA LYS VAL ALA ALA SEQRES 6 B 426 GLU LEU LYS ASP PHE ASN VAL GLU ASP TYR MET ASP LYS SEQRES 7 B 426 LYS GLU ALA ARG LYS MET ASP ARG PHE THR GLN TYR ALA SEQRES 8 B 426 VAL VAL ALA ALA LYS MET ALA VAL GLU ASP ALA ASP LEU SEQRES 9 B 426 ASN ILE THR ASP GLU ILE ALA PRO ARG VAL GLY VAL TRP SEQRES 10 B 426 VAL GLY SER GLY ILE GLY GLY LEU GLU THR LEU GLU SER SEQRES 11 B 426 GLN PHE GLU ILE PHE LEU THR LYS GLY PRO ARG ARG VAL SEQRES 12 B 426 SER PRO PHE PHE VAL PRO MET MET ILE PRO ASP MET ALA SEQRES 13 B 426 THR GLY GLN ILE SER ILE ALA LEU GLY ALA LYS GLY VAL SEQRES 14 B 426 ASN SER CYS THR VAL THR ALA CYS ALA THR GLY THR ASN SEQRES 15 B 426 SER ILE GLY ASP ALA PHE LYS VAL ILE GLN ARG GLY ASP SEQRES 16 B 426 ALA ASP VAL MET VAL THR GLY GLY THR GLU ALA PRO LEU SEQRES 17 B 426 THR ARG MET SER PHE ALA GLY PHE SER ALA ASN LYS ALA SEQRES 18 B 426 LEU SER THR ASN PRO ASP PRO LYS THR ALA SER ARG PRO SEQRES 19 B 426 PHE ASP LYS ASN ARG ASP GLY PHE VAL MET GLY GLU GLY SEQRES 20 B 426 ALA GLY ILE ILE VAL LEU GLU GLU LEU GLU HIS ALA LEU SEQRES 21 B 426 ALA ARG GLY ALA LYS ILE TYR GLY GLU ILE VAL GLY TYR SEQRES 22 B 426 GLY SER THR GLY ASP ALA TYR HIS ILE THR ALA PRO ALA SEQRES 23 B 426 GLN ASP GLY GLU GLY GLY ALA ARG ALA MET GLN GLU ALA SEQRES 24 B 426 ILE LYS ASP ALA GLY ILE ALA PRO GLU GLU ILE ASP TYR SEQRES 25 B 426 ILE ASN ALA HIS GLY THR SER THR TYR TYR ASN ASP LYS SEQRES 26 B 426 TYR GLU THR MET ALA ILE LYS THR VAL PHE GLY GLU HIS SEQRES 27 B 426 ALA HIS LYS LEU ALA VAL SER SER THR LYS SER MET THR SEQRES 28 B 426 GLY HIS LEU LEU GLY ALA ALA GLY GLY ILE GLU ALA ILE SEQRES 29 B 426 PHE SER ILE LEU ALA ILE LYS GLU GLY VAL ILE PRO PRO SEQRES 30 B 426 THR ILE ASN ILE GLN THR PRO ASP GLU GLU CYS ASP LEU SEQRES 31 B 426 ASP TYR VAL PRO ASP GLU ALA ARG ARG GLN GLU LEU ASN SEQRES 32 B 426 TYR VAL LEU SER ASN SER LEU GLY PHE GLY GLY HIS ASN SEQRES 33 B 426 ALA THR LEU ILE PHE LYS LYS TYR GLN SER HET 1XG A 501 16 HET NA A 502 1 HET CL A 503 1 HET EDO A 504 4 HET EDO A 505 4 HET NA A 506 1 HET EDO A 507 4 HET 1XG B 501 16 HET NA B 502 1 HETNAM 1XG (3R,7E,10E)-3-HYDROXY-4-OXODODECA-7,10-DIENAMIDE HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 1XG 2(C12 H19 N O3) FORMUL 4 NA 3(NA 1+) FORMUL 5 CL CL 1- FORMUL 6 EDO 3(C2 H6 O2) FORMUL 12 HOH *393(H2 O) HELIX 1 1 ASP A 20 ASN A 30 1 11 HELIX 2 2 ASN A 58 TYR A 62 5 5 HELIX 3 3 ASP A 64 ARG A 69 1 6 HELIX 4 4 ASP A 72 ASP A 90 1 19 HELIX 5 5 ILE A 97 PRO A 99 5 3 HELIX 6 6 GLY A 111 GLY A 126 1 16 HELIX 7 7 PRO A 127 VAL A 130 5 4 HELIX 8 8 PHE A 133 ILE A 139 1 7 HELIX 9 9 ASP A 141 GLY A 152 1 12 HELIX 10 10 THR A 162 CYS A 164 5 3 HELIX 11 11 ALA A 165 ARG A 180 1 16 HELIX 12 12 THR A 196 ASN A 206 1 11 HELIX 13 13 LEU A 243 ARG A 249 1 7 HELIX 14 14 ALA A 273 ASP A 275 5 3 HELIX 15 15 GLY A 276 GLY A 291 1 16 HELIX 16 16 ALA A 293 ILE A 297 5 5 HELIX 17 17 THR A 307 GLY A 323 1 17 HELIX 18 18 GLU A 324 ALA A 326 5 3 HELIX 19 19 THR A 334 GLY A 339 1 6 HELIX 20 20 LEU A 341 GLY A 343 5 3 HELIX 21 21 ALA A 344 GLY A 360 1 17 HELIX 22 22 ASP B 20 ASN B 30 1 11 HELIX 23 23 ASN B 58 TYR B 62 5 5 HELIX 24 24 ASP B 64 ARG B 69 1 6 HELIX 25 25 ASP B 72 ASP B 90 1 19 HELIX 26 26 ILE B 97 PRO B 99 5 3 HELIX 27 27 GLY B 111 GLY B 126 1 16 HELIX 28 28 PRO B 127 VAL B 130 5 4 HELIX 29 29 PHE B 133 ILE B 139 1 7 HELIX 30 30 ASP B 141 GLY B 152 1 12 HELIX 31 31 THR B 162 CYS B 164 5 3 HELIX 32 32 ALA B 165 ARG B 180 1 16 HELIX 33 33 THR B 196 ASN B 206 1 11 HELIX 34 34 LEU B 243 ARG B 249 1 7 HELIX 35 35 ALA B 273 ASP B 275 5 3 HELIX 36 36 GLY B 276 GLY B 291 1 16 HELIX 37 37 ALA B 293 ILE B 297 5 5 HELIX 38 38 THR B 307 GLY B 323 1 17 HELIX 39 39 GLU B 324 ALA B 326 5 3 HELIX 40 40 THR B 334 GLY B 339 1 6 HELIX 41 41 LEU B 341 GLY B 343 5 3 HELIX 42 42 ALA B 344 GLY B 360 1 17 SHEET 1 A10 ASN A 157 SER A 158 0 SHEET 2 A10 VAL A 101 SER A 107 1 N VAL A 103 O SER A 158 SHEET 3 A10 VAL A 185 GLU A 192 1 O VAL A 185 N GLY A 102 SHEET 4 A10 GLY A 234 GLU A 242 -1 O ILE A 238 N THR A 188 SHEET 5 A10 VAL A 6 LEU A 14 -1 N GLY A 12 O ILE A 237 SHEET 6 A10 GLY A 255 GLY A 264 -1 O GLY A 255 N VAL A 8 SHEET 7 A10 HIS A 402 LYS A 409 -1 O LYS A 409 N GLU A 256 SHEET 8 A10 TYR A 391 GLY A 398 -1 N VAL A 392 O PHE A 408 SHEET 9 A10 TYR A 299 ASN A 301 1 N ASN A 301 O LEU A 393 SHEET 10 A10 ALA A 330 SER A 332 1 O ALA A 330 N ILE A 300 SHEET 1 B 2 ILE A 35 PRO A 37 0 SHEET 2 B 2 VAL A 50 ALA A 52 -1 O ALA A 51 N GLY A 36 SHEET 1 C 2 VAL A 361 ILE A 362 0 SHEET 2 C 2 ARG A 385 ARG A 386 -1 O ARG A 385 N ILE A 362 SHEET 1 D10 ASN B 157 SER B 158 0 SHEET 2 D10 VAL B 101 GLY B 106 1 N VAL B 103 O SER B 158 SHEET 3 D10 VAL B 185 GLU B 192 1 O VAL B 185 N GLY B 102 SHEET 4 D10 GLY B 234 GLU B 242 -1 O ILE B 238 N THR B 188 SHEET 5 D10 VAL B 6 LEU B 14 -1 N GLY B 12 O ILE B 237 SHEET 6 D10 GLY B 255 GLY B 264 -1 O GLY B 255 N VAL B 8 SHEET 7 D10 HIS B 402 LYS B 409 -1 O LYS B 409 N GLU B 256 SHEET 8 D10 TYR B 391 GLY B 398 -1 N VAL B 392 O PHE B 408 SHEET 9 D10 TYR B 299 ASN B 301 1 N ASN B 301 O LEU B 393 SHEET 10 D10 ALA B 330 SER B 332 1 O ALA B 330 N ILE B 300 SHEET 1 E 2 ILE B 35 PRO B 37 0 SHEET 2 E 2 VAL B 50 ALA B 52 -1 O ALA B 51 N GLY B 36 SHEET 1 F 2 VAL B 361 ILE B 362 0 SHEET 2 F 2 ARG B 385 ARG B 386 -1 O ARG B 385 N ILE B 362 LINK SG CYS A 164 C3 1XG A 501 1555 1555 1.93 LINK SG CYS B 164 C3 1XG B 501 1555 1555 1.90 LINK OD1 ASP A 141 NA NA B 502 1555 1555 2.70 LINK OE1 GLU A 233 NA NA A 502 1555 1555 2.64 LINK NA NA A 502 O HOH A 611 1555 1555 2.77 LINK NA NA A 506 O HOH A 656 1555 1555 2.95 LINK O GLY B 108 NA NA B 502 1555 1555 2.65 SITE 1 AC1 9 ILE A 109 ALA A 163 CYS A 164 PHE A 203 SITE 2 AC1 9 HIS A 303 HIS A 340 LEU A 397 GLY A 398 SITE 3 AC1 9 PHE A 399 SITE 1 AC2 6 ARG A 40 ALA A 193 PRO A 194 LEU A 195 SITE 2 AC2 6 GLU A 233 HOH A 611 SITE 1 AC3 4 ASP A 72 THR A 75 MET A 137 HOH A 630 SITE 1 AC4 4 GLU A 45 THR A 94 ASP A 95 GLU A 96 SITE 1 AC5 8 TYR A 260 GLY A 261 SER A 262 HOH A 716 SITE 2 AC5 8 HOH A 803 VAL B 156 ARG B 180 ASP B 182 SITE 1 AC6 6 GLY A 12 ALA A 13 ASP A 20 VAL A 21 SITE 2 AC6 6 MET A 84 HOH A 656 SITE 1 AC7 6 VAL A 156 ARG A 180 ASP A 182 HOH A 741 SITE 2 AC7 6 TYR B 260 SER B 262 SITE 1 AC8 9 ILE B 109 ALA B 163 CYS B 164 PHE B 203 SITE 2 AC8 9 HIS B 303 HIS B 340 LEU B 397 GLY B 398 SITE 3 AC8 9 PHE B 399 SITE 1 AC9 5 ILE A 139 ASP A 141 GLY B 108 VAL B 161 SITE 2 AC9 5 ALA B 163 CRYST1 86.440 87.560 116.440 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008588 0.00000