HEADER TRANSFERASE 23-JUL-13 4LT6 TITLE CRYSTAL STRUCTURE OF HUMAN POLY(A) POLYMERASE GAMMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) POLYMERASE GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-508; COMPND 5 SYNONYM: PAP-GAMMA, NEO-POLY(A) POLYMERASE, NEO-PAP, POLYNUCLEOTIDE COMPND 6 ADENYLYLTRANSFERASE GAMMA, SRP RNA 3'-ADENYLATING ENZYME; COMPND 7 EC: 2.7.7.19; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAPOLG, PAP2, PAPG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLY(A) POLYMERASE, PAP, POLYMERASE, POLYADENYLATION, 3' PROCESSING, KEYWDS 2 MRNA PROCESSING, NUCLEUS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.YANG,L.NAUSCH,G.MARTIN,W.KELLER,S.DOUBLIE REVDAT 4 20-SEP-23 4LT6 1 REMARK SEQADV LINK REVDAT 3 08-JAN-14 4LT6 1 JRNL REVDAT 2 16-OCT-13 4LT6 1 JRNL REVDAT 1 09-OCT-13 4LT6 0 JRNL AUTH Q.YANG,L.W.NAUSCH,G.MARTIN,W.KELLER,S.DOUBLIE JRNL TITL CRYSTAL STRUCTURE OF HUMAN POLY(A) POLYMERASE GAMMA REVEALS JRNL TITL 2 A CONSERVED CATALYTIC CORE FOR CANONICAL POLY(A) JRNL TITL 3 POLYMERASES. JRNL REF J.MOL.BIOL. V. 426 43 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24076191 JRNL DOI 10.1016/J.JMB.2013.09.025 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6_289) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 29444 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 2784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8847 - 7.4404 0.99 2825 138 0.1491 0.1826 REMARK 3 2 7.4404 - 5.9579 1.00 2871 138 0.1704 0.2120 REMARK 3 3 5.9579 - 5.2203 1.00 2852 167 0.1616 0.2075 REMARK 3 4 5.2203 - 4.7502 1.00 2858 152 0.1485 0.2217 REMARK 3 5 4.7502 - 4.4137 1.00 2858 163 0.1483 0.2125 REMARK 3 6 4.4137 - 4.1560 1.00 2880 120 0.1539 0.2458 REMARK 3 7 4.1560 - 3.9495 1.00 2840 153 0.1606 0.2004 REMARK 3 8 3.9495 - 3.7788 1.00 2854 133 0.1650 0.2258 REMARK 3 9 3.7788 - 3.6343 1.00 2878 130 0.1813 0.2693 REMARK 3 10 3.6343 - 3.5096 1.00 2894 144 0.2117 0.2667 REMARK 3 11 3.5096 - 3.4004 1.00 2831 159 0.2258 0.2726 REMARK 3 12 3.4004 - 3.3036 1.00 2831 163 0.2417 0.3622 REMARK 3 13 3.3036 - 3.2170 0.99 2815 145 0.2594 0.3952 REMARK 3 14 3.2170 - 3.1388 0.99 2829 173 0.2621 0.3071 REMARK 3 15 3.1388 - 3.0678 0.98 2824 131 0.2627 0.3335 REMARK 3 16 3.0678 - 3.0027 0.95 2709 129 0.2534 0.3135 REMARK 3 17 3.0027 - 2.9428 0.92 2676 138 0.2809 0.3249 REMARK 3 18 2.9428 - 2.8875 0.88 2463 127 0.2847 0.3360 REMARK 3 19 2.8875 - 2.8360 0.81 2326 113 0.2805 0.3774 REMARK 3 20 2.8360 - 2.7900 0.64 1861 68 0.3150 0.3748 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.82250 REMARK 3 B22 (A**2) : -0.11530 REMARK 3 B33 (A**2) : -6.70720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7777 REMARK 3 ANGLE : 1.250 10564 REMARK 3 CHIRALITY : 0.085 1175 REMARK 3 PLANARITY : 0.007 1336 REMARK 3 DIHEDRAL : 17.905 2914 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : XENOCS MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31418 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.790 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Q78 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%(W/V) PEG 8000, 50MM TRIS-HCL, REMARK 280 100MM (NH4)2SO4, 5MM CACL2, PH 8.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.43500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.81500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.96000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 100.81500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.43500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.96000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLU A 3 REMARK 465 MET A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 ASN A 7 REMARK 465 THR A 8 REMARK 465 VAL A 9 REMARK 465 LEU A 10 REMARK 465 ASP A 11 REMARK 465 SER A 12 REMARK 465 GLN A 13 REMARK 465 ARG A 14 REMARK 465 GLN A 15 REMARK 465 GLN A 16 REMARK 465 ASN A 423 REMARK 465 LYS A 424 REMARK 465 GLU A 425 REMARK 465 HIS A 426 REMARK 465 HIS A 427 REMARK 465 LYS A 428 REMARK 465 ASP A 429 REMARK 465 ASN A 430 REMARK 465 ARG A 444 REMARK 465 VAL A 445 REMARK 465 GLU A 446 REMARK 465 ASN A 447 REMARK 465 ALA A 448 REMARK 465 GLU A 449 REMARK 465 SER A 450 REMARK 465 VAL A 451 REMARK 465 ASN A 452 REMARK 465 ILE A 453 REMARK 465 GLN A 502 REMARK 465 LYS A 503 REMARK 465 LYS A 504 REMARK 465 LYS A 505 REMARK 465 LYS A 506 REMARK 465 GLN A 507 REMARK 465 SER A 508 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLU B 3 REMARK 465 MET B 4 REMARK 465 SER B 5 REMARK 465 ALA B 6 REMARK 465 ASN B 7 REMARK 465 THR B 8 REMARK 465 VAL B 9 REMARK 465 LEU B 10 REMARK 465 ASP B 11 REMARK 465 SER B 12 REMARK 465 GLN B 13 REMARK 465 ARG B 14 REMARK 465 GLN B 15 REMARK 465 GLN B 16 REMARK 465 LYS B 17 REMARK 465 ASN B 423 REMARK 465 LYS B 424 REMARK 465 GLU B 425 REMARK 465 HIS B 426 REMARK 465 HIS B 427 REMARK 465 LYS B 428 REMARK 465 ASP B 429 REMARK 465 ASN B 430 REMARK 465 ARG B 444 REMARK 465 VAL B 445 REMARK 465 GLU B 446 REMARK 465 ASN B 447 REMARK 465 ALA B 448 REMARK 465 GLU B 449 REMARK 465 SER B 450 REMARK 465 VAL B 451 REMARK 465 ASN B 452 REMARK 465 ILE B 453 REMARK 465 ALA B 498 REMARK 465 GLU B 499 REMARK 465 ILE B 500 REMARK 465 LEU B 501 REMARK 465 GLN B 502 REMARK 465 LYS B 503 REMARK 465 LYS B 504 REMARK 465 LYS B 505 REMARK 465 LYS B 506 REMARK 465 GLN B 507 REMARK 465 SER B 508 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 461 OG1 THR A 465 2.07 REMARK 500 OG SER B 101 O3G 3AT B 601 2.10 REMARK 500 O2' 3AT B 601 O HOH B 724 2.15 REMARK 500 ND2 ASN B 180 O HOH B 713 2.17 REMARK 500 NZ LYS B 227 O HOH B 723 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 18 -159.92 -88.32 REMARK 500 TYR A 19 -66.03 -102.20 REMARK 500 SER A 101 -61.33 -29.78 REMARK 500 ARG A 121 -53.69 -27.47 REMARK 500 ARG A 146 135.47 -170.49 REMARK 500 ASN A 180 60.08 -109.45 REMARK 500 SER A 237 107.42 176.29 REMARK 500 PHE A 242 -147.97 -95.44 REMARK 500 PRO A 281 44.22 -98.65 REMARK 500 ASP A 300 102.54 -170.26 REMARK 500 VAL A 303 -3.76 -149.06 REMARK 500 MET A 312 55.09 -149.45 REMARK 500 ALA A 498 -31.85 54.46 REMARK 500 ILE A 500 69.78 -55.45 REMARK 500 PRO B 47 3.30 -67.23 REMARK 500 TRP B 74 -70.07 -66.52 REMARK 500 ILE B 75 -29.80 -35.08 REMARK 500 ASN B 83 89.09 74.75 REMARK 500 PRO B 86 39.14 -69.62 REMARK 500 HIS B 122 40.79 -105.87 REMARK 500 GLN B 130 -80.43 -108.53 REMARK 500 ASP B 150 49.96 -84.10 REMARK 500 ALA B 173 69.76 -69.11 REMARK 500 SER B 178 -175.09 -62.92 REMARK 500 ASN B 180 62.54 -112.59 REMARK 500 SER B 237 106.61 170.25 REMARK 500 PHE B 242 -140.61 -107.65 REMARK 500 PRO B 281 47.01 -96.46 REMARK 500 ASP B 300 100.30 -169.50 REMARK 500 SER B 381 -58.75 -124.25 REMARK 500 THR B 382 -168.47 -75.30 REMARK 500 PRO B 421 -159.12 -103.66 REMARK 500 LYS B 490 18.93 -62.23 REMARK 500 LEU B 496 -94.51 -112.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 112 OD1 REMARK 620 2 ASP A 114 OD2 108.5 REMARK 620 3 3AT A 601 O2G 95.0 153.4 REMARK 620 4 3AT A 601 O1B 157.5 80.2 73.5 REMARK 620 5 3AT A 601 O1A 125.4 101.1 73.8 70.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 112 OD1 REMARK 620 2 ASP B 114 OD2 104.1 REMARK 620 3 3AT B 601 O1G 107.6 148.2 REMARK 620 4 3AT B 601 O1B 153.2 77.8 72.8 REMARK 620 5 3AT B 601 O1A 130.3 98.1 62.7 74.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3AT A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3AT B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 602 DBREF 4LT6 A 1 508 UNP Q9BWT3 PAPOG_HUMAN 1 508 DBREF 4LT6 B 1 508 UNP Q9BWT3 PAPOG_HUMAN 1 508 SEQADV 4LT6 HIS A -5 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS A -4 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS A -3 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS A -2 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS A -1 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS A 0 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B -5 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B -4 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B -3 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B -2 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B -1 UNP Q9BWT3 EXPRESSION TAG SEQADV 4LT6 HIS B 0 UNP Q9BWT3 EXPRESSION TAG SEQRES 1 A 514 HIS HIS HIS HIS HIS HIS MET LYS GLU MET SER ALA ASN SEQRES 2 A 514 THR VAL LEU ASP SER GLN ARG GLN GLN LYS HIS TYR GLY SEQRES 3 A 514 ILE THR SER PRO ILE SER LEU ALA SER PRO LYS GLU ILE SEQRES 4 A 514 ASP HIS ILE TYR THR GLN LYS LEU ILE ASP ALA MET LYS SEQRES 5 A 514 PRO PHE GLY VAL PHE GLU ASP GLU GLU GLU LEU ASN HIS SEQRES 6 A 514 ARG LEU VAL VAL LEU GLY LYS LEU ASN ASN LEU VAL LYS SEQRES 7 A 514 GLU TRP ILE SER ASP VAL SER GLU SER LYS ASN LEU PRO SEQRES 8 A 514 PRO SER VAL VAL ALA THR VAL GLY GLY LYS ILE PHE THR SEQRES 9 A 514 PHE GLY SER TYR ARG LEU GLY VAL HIS THR LYS GLY ALA SEQRES 10 A 514 ASP ILE ASP ALA LEU CYS VAL ALA PRO ARG HIS VAL GLU SEQRES 11 A 514 ARG SER ASP PHE PHE GLN SER PHE PHE GLU LYS LEU LYS SEQRES 12 A 514 HIS GLN ASP GLY ILE ARG ASN LEU ARG ALA VAL GLU ASP SEQRES 13 A 514 ALA PHE VAL PRO VAL ILE LYS PHE GLU PHE ASP GLY ILE SEQRES 14 A 514 GLU ILE ASP LEU VAL PHE ALA ARG LEU ALA ILE GLN THR SEQRES 15 A 514 ILE SER ASP ASN LEU ASP LEU ARG ASP ASP SER ARG LEU SEQRES 16 A 514 ARG SER LEU ASP ILE ARG CYS ILE ARG SER LEU ASN GLY SEQRES 17 A 514 CYS ARG VAL THR ASP GLU ILE LEU HIS LEU VAL PRO ASN SEQRES 18 A 514 LYS GLU THR PHE ARG LEU THR LEU ARG ALA VAL LYS LEU SEQRES 19 A 514 TRP ALA LYS ARG ARG GLY ILE TYR SER ASN MET LEU GLY SEQRES 20 A 514 PHE LEU GLY GLY VAL SER TRP ALA MET LEU VAL ALA ARG SEQRES 21 A 514 THR CYS GLN LEU TYR PRO ASN ALA ALA ALA SER THR LEU SEQRES 22 A 514 VAL HIS LYS PHE PHE LEU VAL PHE SER LYS TRP GLU TRP SEQRES 23 A 514 PRO ASN PRO VAL LEU LEU LYS GLN PRO GLU GLU SER ASN SEQRES 24 A 514 LEU ASN LEU PRO VAL TRP ASP PRO ARG VAL ASN PRO SER SEQRES 25 A 514 ASP ARG TYR HIS LEU MET PRO ILE ILE THR PRO ALA TYR SEQRES 26 A 514 PRO GLN GLN ASN SER THR TYR ASN VAL SER THR SER THR SEQRES 27 A 514 ARG THR VAL MET VAL GLU GLU PHE LYS GLN GLY LEU ALA SEQRES 28 A 514 VAL THR ASP GLU ILE LEU GLN GLY LYS SER ASP TRP SER SEQRES 29 A 514 LYS LEU LEU GLU PRO PRO ASN PHE PHE GLN LYS TYR ARG SEQRES 30 A 514 HIS TYR ILE VAL LEU THR ALA SER ALA SER THR GLU GLU SEQRES 31 A 514 ASN HIS LEU GLU TRP VAL GLY LEU VAL GLU SER LYS ILE SEQRES 32 A 514 ARG VAL LEU VAL GLY ASN LEU GLU ARG ASN GLU PHE ILE SEQRES 33 A 514 THR LEU ALA HIS VAL ASN PRO GLN SER PHE PRO GLY ASN SEQRES 34 A 514 LYS GLU HIS HIS LYS ASP ASN ASN TYR VAL SER MET TRP SEQRES 35 A 514 PHE LEU GLY ILE ILE PHE ARG ARG VAL GLU ASN ALA GLU SEQRES 36 A 514 SER VAL ASN ILE ASP LEU THR TYR ASP ILE GLN SER PHE SEQRES 37 A 514 THR ASP THR VAL TYR ARG GLN ALA ASN ASN ILE ASN MET SEQRES 38 A 514 LEU LYS GLU GLY MET LYS ILE GLU ALA THR HIS VAL LYS SEQRES 39 A 514 LYS LYS GLN LEU HIS HIS TYR LEU PRO ALA GLU ILE LEU SEQRES 40 A 514 GLN LYS LYS LYS LYS GLN SER SEQRES 1 B 514 HIS HIS HIS HIS HIS HIS MET LYS GLU MET SER ALA ASN SEQRES 2 B 514 THR VAL LEU ASP SER GLN ARG GLN GLN LYS HIS TYR GLY SEQRES 3 B 514 ILE THR SER PRO ILE SER LEU ALA SER PRO LYS GLU ILE SEQRES 4 B 514 ASP HIS ILE TYR THR GLN LYS LEU ILE ASP ALA MET LYS SEQRES 5 B 514 PRO PHE GLY VAL PHE GLU ASP GLU GLU GLU LEU ASN HIS SEQRES 6 B 514 ARG LEU VAL VAL LEU GLY LYS LEU ASN ASN LEU VAL LYS SEQRES 7 B 514 GLU TRP ILE SER ASP VAL SER GLU SER LYS ASN LEU PRO SEQRES 8 B 514 PRO SER VAL VAL ALA THR VAL GLY GLY LYS ILE PHE THR SEQRES 9 B 514 PHE GLY SER TYR ARG LEU GLY VAL HIS THR LYS GLY ALA SEQRES 10 B 514 ASP ILE ASP ALA LEU CYS VAL ALA PRO ARG HIS VAL GLU SEQRES 11 B 514 ARG SER ASP PHE PHE GLN SER PHE PHE GLU LYS LEU LYS SEQRES 12 B 514 HIS GLN ASP GLY ILE ARG ASN LEU ARG ALA VAL GLU ASP SEQRES 13 B 514 ALA PHE VAL PRO VAL ILE LYS PHE GLU PHE ASP GLY ILE SEQRES 14 B 514 GLU ILE ASP LEU VAL PHE ALA ARG LEU ALA ILE GLN THR SEQRES 15 B 514 ILE SER ASP ASN LEU ASP LEU ARG ASP ASP SER ARG LEU SEQRES 16 B 514 ARG SER LEU ASP ILE ARG CYS ILE ARG SER LEU ASN GLY SEQRES 17 B 514 CYS ARG VAL THR ASP GLU ILE LEU HIS LEU VAL PRO ASN SEQRES 18 B 514 LYS GLU THR PHE ARG LEU THR LEU ARG ALA VAL LYS LEU SEQRES 19 B 514 TRP ALA LYS ARG ARG GLY ILE TYR SER ASN MET LEU GLY SEQRES 20 B 514 PHE LEU GLY GLY VAL SER TRP ALA MET LEU VAL ALA ARG SEQRES 21 B 514 THR CYS GLN LEU TYR PRO ASN ALA ALA ALA SER THR LEU SEQRES 22 B 514 VAL HIS LYS PHE PHE LEU VAL PHE SER LYS TRP GLU TRP SEQRES 23 B 514 PRO ASN PRO VAL LEU LEU LYS GLN PRO GLU GLU SER ASN SEQRES 24 B 514 LEU ASN LEU PRO VAL TRP ASP PRO ARG VAL ASN PRO SER SEQRES 25 B 514 ASP ARG TYR HIS LEU MET PRO ILE ILE THR PRO ALA TYR SEQRES 26 B 514 PRO GLN GLN ASN SER THR TYR ASN VAL SER THR SER THR SEQRES 27 B 514 ARG THR VAL MET VAL GLU GLU PHE LYS GLN GLY LEU ALA SEQRES 28 B 514 VAL THR ASP GLU ILE LEU GLN GLY LYS SER ASP TRP SER SEQRES 29 B 514 LYS LEU LEU GLU PRO PRO ASN PHE PHE GLN LYS TYR ARG SEQRES 30 B 514 HIS TYR ILE VAL LEU THR ALA SER ALA SER THR GLU GLU SEQRES 31 B 514 ASN HIS LEU GLU TRP VAL GLY LEU VAL GLU SER LYS ILE SEQRES 32 B 514 ARG VAL LEU VAL GLY ASN LEU GLU ARG ASN GLU PHE ILE SEQRES 33 B 514 THR LEU ALA HIS VAL ASN PRO GLN SER PHE PRO GLY ASN SEQRES 34 B 514 LYS GLU HIS HIS LYS ASP ASN ASN TYR VAL SER MET TRP SEQRES 35 B 514 PHE LEU GLY ILE ILE PHE ARG ARG VAL GLU ASN ALA GLU SEQRES 36 B 514 SER VAL ASN ILE ASP LEU THR TYR ASP ILE GLN SER PHE SEQRES 37 B 514 THR ASP THR VAL TYR ARG GLN ALA ASN ASN ILE ASN MET SEQRES 38 B 514 LEU LYS GLU GLY MET LYS ILE GLU ALA THR HIS VAL LYS SEQRES 39 B 514 LYS LYS GLN LEU HIS HIS TYR LEU PRO ALA GLU ILE LEU SEQRES 40 B 514 GLN LYS LYS LYS LYS GLN SER HET 3AT A 601 30 HET CA A 602 1 HET 3AT B 601 30 HET CA B 602 1 HETNAM 3AT 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETSYN 3AT CORDYCEPIN TRIPHOSPHATE FORMUL 3 3AT 2(C10 H16 N5 O12 P3) FORMUL 4 CA 2(CA 2+) FORMUL 7 HOH *53(H2 O) HELIX 1 1 LYS A 31 LYS A 46 1 16 HELIX 2 2 PRO A 47 GLY A 49 5 3 HELIX 3 3 ASP A 53 SER A 79 1 27 HELIX 4 4 PRO A 85 ALA A 90 1 6 HELIX 5 5 GLY A 100 GLY A 105 1 6 HELIX 6 6 GLU A 124 GLN A 139 1 16 HELIX 7 7 ASP A 185 ARG A 190 5 6 HELIX 8 8 ASP A 193 LEU A 212 1 20 HELIX 9 9 ASN A 215 ARG A 233 1 19 HELIX 10 10 GLY A 244 TYR A 259 1 16 HELIX 11 11 ALA A 263 TRP A 278 1 16 HELIX 12 12 SER A 306 HIS A 310 5 5 HELIX 13 13 SER A 329 LEU A 351 1 23 HELIX 14 14 ASP A 356 GLU A 362 1 7 HELIX 15 15 THR A 382 SER A 395 1 14 HELIX 16 16 LYS A 396 ASN A 407 1 12 HELIX 17 17 LEU A 455 ILE A 473 1 19 HELIX 18 18 GLN A 491 TYR A 495 5 5 HELIX 19 19 LYS B 31 LYS B 46 1 16 HELIX 20 20 PRO B 47 GLY B 49 5 3 HELIX 21 21 ASP B 53 ASN B 83 1 31 HELIX 22 22 GLY B 100 GLY B 105 1 6 HELIX 23 23 GLU B 124 GLN B 130 1 7 HELIX 24 24 PHE B 132 HIS B 138 1 7 HELIX 25 25 ASP B 185 ARG B 190 5 6 HELIX 26 26 ASP B 193 LEU B 212 1 20 HELIX 27 27 ASN B 215 ARG B 233 1 19 HELIX 28 28 GLY B 244 TYR B 259 1 16 HELIX 29 29 ALA B 263 SER B 276 1 14 HELIX 30 30 ASN B 304 HIS B 310 5 7 HELIX 31 31 SER B 329 GLN B 352 1 24 HELIX 32 32 ASP B 356 LEU B 361 1 6 HELIX 33 33 ASN B 365 LYS B 369 5 5 HELIX 34 34 THR B 382 SER B 395 1 14 HELIX 35 35 LYS B 396 ASN B 407 1 12 HELIX 36 36 LEU B 455 ILE B 473 1 19 HELIX 37 37 LYS B 490 TYR B 495 5 6 SHEET 1 A 5 LYS A 95 PHE A 99 0 SHEET 2 A 5 ILE A 113 ALA A 119 -1 O LEU A 116 N PHE A 97 SHEET 3 A 5 ILE A 163 ARG A 171 1 O VAL A 168 N CYS A 117 SHEET 4 A 5 VAL A 155 PHE A 160 -1 N PHE A 158 O ILE A 165 SHEET 5 A 5 ILE A 142 VAL A 148 -1 N ARG A 143 O GLU A 159 SHEET 1 B 4 ILE A 410 PHE A 420 0 SHEET 2 B 4 TYR A 432 PHE A 442 -1 O ILE A 441 N THR A 411 SHEET 3 B 4 HIS A 372 ALA A 380 -1 N ALA A 378 O SER A 434 SHEET 4 B 4 LYS A 481 LYS A 488 -1 O LYS A 481 N SER A 379 SHEET 1 C 5 LYS B 95 PHE B 99 0 SHEET 2 C 5 ILE B 113 ALA B 119 -1 O LEU B 116 N PHE B 97 SHEET 3 C 5 ILE B 163 ARG B 171 1 O VAL B 168 N CYS B 117 SHEET 4 C 5 VAL B 155 PHE B 160 -1 N PHE B 158 O ILE B 165 SHEET 5 C 5 ARG B 146 VAL B 148 -1 N VAL B 148 O VAL B 155 SHEET 1 D 4 ILE B 410 VAL B 415 0 SHEET 2 D 4 TYR B 432 PHE B 442 -1 O GLY B 439 N HIS B 414 SHEET 3 D 4 HIS B 372 ALA B 380 -1 N ALA B 378 O SER B 434 SHEET 4 D 4 LYS B 481 LYS B 488 -1 O THR B 485 N VAL B 375 LINK OD1 ASP A 112 CA CA A 602 1555 1555 2.40 LINK OD2 ASP A 114 CA CA A 602 1555 1555 2.36 LINK O2G 3AT A 601 CA CA A 602 1555 1555 2.34 LINK O1B 3AT A 601 CA CA A 602 1555 1555 2.45 LINK O1A 3AT A 601 CA CA A 602 1555 1555 2.89 LINK OD1 ASP B 112 CA CA B 602 1555 1555 2.59 LINK OD2 ASP B 114 CA CA B 602 1555 1555 2.51 LINK O1G 3AT B 601 CA CA B 602 1555 1555 2.33 LINK O1B 3AT B 601 CA CA B 602 1555 1555 2.39 LINK O1A 3AT B 601 CA CA B 602 1555 1555 2.80 CISPEP 1 TRP A 280 PRO A 281 0 0.74 CISPEP 2 TYR A 319 PRO A 320 0 -1.97 CISPEP 3 TRP B 280 PRO B 281 0 0.93 CISPEP 4 TYR B 319 PRO B 320 0 -3.65 SITE 1 AC1 17 PHE A 99 GLY A 100 SER A 101 ASP A 112 SITE 2 AC1 17 ASP A 114 ASN A 201 VAL A 205 LYS A 227 SITE 3 AC1 17 TYR A 236 VAL A 246 THR A 316 SER A 324 SITE 4 AC1 17 CA A 602 HOH A 714 HOH A 715 HOH A 726 SITE 5 AC1 17 HOH A 727 SITE 1 AC2 3 ASP A 112 ASP A 114 3AT A 601 SITE 1 AC3 14 PHE B 99 GLY B 100 SER B 101 ASP B 114 SITE 2 AC3 14 ASN B 201 LYS B 227 TYR B 236 VAL B 246 SITE 3 AC3 14 THR B 316 SER B 324 CA B 602 HOH B 723 SITE 4 AC3 14 HOH B 724 HOH B 726 SITE 1 AC4 3 ASP B 112 ASP B 114 3AT B 601 CRYST1 68.870 89.920 201.630 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014520 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004960 0.00000