HEADER CELL ADHESION 02-AUG-13 4M16 TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL FIC DOMAIN OF BARTONELLA EFFECTOR TITLE 2 PROTEIN (BEP); SUBSTRATE OF VIRB T4SS (VIRB-TRANSLOCATED BEP EFFECTOR TITLE 3 PROTEIN) FROM BARTONELLA SP. AR 15-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BARTONELLA EFFECTOR PROTEIN (BEP) SUBSTRATE OF VIRB T4SS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 9-240; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA SP. AR 15-3; SOURCE 3 ORGANISM_TAXID: 545617; SOURCE 4 GENE: BAR15_120228; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, FIC DOMAIN, CELL FILAMENTATION, CELL KEYWDS 4 ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 20-SEP-23 4M16 1 REMARK REVDAT 3 24-AUG-22 4M16 1 JRNL REVDAT 2 08-SEP-21 4M16 1 JRNL REMARK SEQADV REVDAT 1 06-AUG-14 4M16 0 JRNL AUTH T.SCHIRMER,T.A.P.DE BEER,S.TAMEGGER,A.HARMS,N.DIETZ, JRNL AUTH 2 D.M.DRANOW,T.E.EDWARDS,P.J.MYLER,I.PHAN,C.DEHIO JRNL TITL EVOLUTIONARY DIVERSIFICATION OF HOST-TARGETED BARTONELLA JRNL TITL 2 EFFECTORS PROTEINS DERIVED FROM A CONSERVED FICTA JRNL TITL 3 TOXIN-ANTITOXIN MODULE. JRNL REF MICROORGANISMS V. 9 1645 2021 JRNL REFN ESSN 2076-2607 JRNL PMID 34442725 JRNL DOI 10.3390/MICROORGANISMS9081645 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 21205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1091 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1478 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1803 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 271 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.83000 REMARK 3 B22 (A**2) : -1.11000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.61000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.641 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1893 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1759 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2558 ; 1.496 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4054 ; 0.865 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 5.414 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;29.855 ;24.388 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 330 ;13.938 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 9.758 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2169 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 467 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 911 ; 0.912 ; 1.214 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 910 ; 0.907 ; 1.213 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1140 ; 1.434 ; 1.813 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 27 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1166 -4.5188 70.8024 REMARK 3 T TENSOR REMARK 3 T11: 0.1366 T22: 0.0560 REMARK 3 T33: 0.0514 T12: 0.0110 REMARK 3 T13: -0.0121 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.5205 L22: 0.8377 REMARK 3 L33: 6.5551 L12: 0.1424 REMARK 3 L13: 0.8222 L23: -0.9667 REMARK 3 S TENSOR REMARK 3 S11: -0.1036 S12: -0.0342 S13: 0.0432 REMARK 3 S21: -0.0208 S22: 0.0585 S23: -0.0565 REMARK 3 S31: -0.0251 S32: -0.2802 S33: 0.0452 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4315 -1.7680 90.8917 REMARK 3 T TENSOR REMARK 3 T11: 0.1330 T22: 0.0514 REMARK 3 T33: 0.0750 T12: 0.0471 REMARK 3 T13: 0.0028 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 2.9563 L22: 5.4695 REMARK 3 L33: 6.4647 L12: 2.6955 REMARK 3 L13: 1.4221 L23: 4.0556 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: 0.0777 S13: 0.0612 REMARK 3 S21: 0.2230 S22: -0.1164 S23: 0.2075 REMARK 3 S31: 0.1026 S32: -0.2718 S33: 0.0659 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6933 13.6841 83.3106 REMARK 3 T TENSOR REMARK 3 T11: 0.0902 T22: 0.0650 REMARK 3 T33: 0.0568 T12: 0.0102 REMARK 3 T13: 0.0029 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.3726 L22: 1.6971 REMARK 3 L33: 0.8820 L12: 0.0989 REMARK 3 L13: 0.2190 L23: 0.4442 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: 0.0184 S13: 0.0088 REMARK 3 S21: 0.0072 S22: 0.0720 S23: -0.1153 REMARK 3 S31: 0.0153 S32: 0.0863 S33: -0.0691 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 178 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7765 15.5535 87.1333 REMARK 3 T TENSOR REMARK 3 T11: 0.0448 T22: 0.0976 REMARK 3 T33: 0.1240 T12: 0.0123 REMARK 3 T13: 0.0095 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.2401 L22: 3.4275 REMARK 3 L33: 9.8188 L12: 0.0057 REMARK 3 L13: 0.9340 L23: -2.3190 REMARK 3 S TENSOR REMARK 3 S11: 0.0804 S12: 0.0311 S13: -0.0880 REMARK 3 S21: 0.1483 S22: 0.1222 S23: 0.3772 REMARK 3 S31: -0.0835 S32: -0.5931 S33: -0.2026 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 196 A 210 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1567 25.7231 80.1648 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.0986 REMARK 3 T33: 0.1526 T12: 0.0310 REMARK 3 T13: -0.0082 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.0306 L22: 2.1512 REMARK 3 L33: 10.1064 L12: -0.3564 REMARK 3 L13: 1.0108 L23: 0.0724 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: 0.0726 S13: 0.0497 REMARK 3 S21: 0.0389 S22: 0.0295 S23: 0.4203 REMARK 3 S31: -0.5929 S32: -0.0433 S33: -0.0061 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 211 A 225 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2906 25.4972 102.7931 REMARK 3 T TENSOR REMARK 3 T11: 0.1331 T22: 0.1464 REMARK 3 T33: 0.2100 T12: -0.0026 REMARK 3 T13: 0.0202 T23: 0.0463 REMARK 3 L TENSOR REMARK 3 L11: 4.6429 L22: 2.8401 REMARK 3 L33: 14.4411 L12: -2.7639 REMARK 3 L13: -8.0274 L23: 5.5311 REMARK 3 S TENSOR REMARK 3 S11: -0.0927 S12: -0.4024 S13: -0.0215 REMARK 3 S21: 0.0957 S22: 0.0699 S23: -0.2060 REMARK 3 S31: 0.2101 S32: 0.6081 S33: 0.0228 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4M16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: PDB ENTRY 4LU4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCSG1(A1): 0.1 M HEPES/NAOH, PH 7.5, REMARK 280 20% PEG8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.74000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 PHE A 226 REMARK 465 LYS A 227 REMARK 465 HIS A 228 REMARK 465 ILE A 229 REMARK 465 PRO A 230 REMARK 465 ARG A 231 REMARK 465 VAL A 232 REMARK 465 GLU A 233 REMARK 465 ARG A 234 REMARK 465 GLN A 235 REMARK 465 ARG A 236 REMARK 465 LEU A 237 REMARK 465 ASN A 238 REMARK 465 ASP A 239 REMARK 465 GLU A 240 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 ARG A 223 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 155 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 175 -163.89 -120.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BASAA.17330.C RELATED DB: TARGETTRACK DBREF 4M16 A 9 240 UNP E6YQQ1 E6YQQ1_9RHIZ 9 240 SEQADV 4M16 MET A 0 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 ALA A 1 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 2 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 3 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 4 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 5 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 6 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 HIS A 7 UNP E6YQQ1 EXPRESSION TAG SEQADV 4M16 MET A 8 UNP E6YQQ1 EXPRESSION TAG SEQRES 1 A 241 MET ALA HIS HIS HIS HIS HIS HIS MET VAL LEU ASN TYR SEQRES 2 A 241 PHE TYR PRO GLY THR LYS THR LEU LYS ASN LYS LEU GLY SEQRES 3 A 241 ILE MET GLY TYR LYS GLN LEU GLU LYS ARG CYS LYS ARG SEQRES 4 A 241 ASN ALA LYS LYS VAL ILE ASN SER LEU ARG ASN GLU PRO SEQRES 5 A 241 LEU PRO GLU THR PHE ASP SER SER TYR LEU LYS TYR LEU SEQRES 6 A 241 HIS LYS ARG LEU PHE GLY SER ALA PHE GLU TRP ALA GLY SEQRES 7 A 241 TYR THR ARG ASP LEU SER PHE ALA PHE ASP ASP GLY THR SEQRES 8 A 241 ILE ALA GLN MET SER MET MET LYS ILE PRO GLY THR ASP SEQRES 9 A 241 ILE TYR PHE ALA HIS GLY ASP LYS ILE GLN GLU ASN LEU SEQRES 10 A 241 LYS GLU PHE ASP GLU ILE LEU ALA SER LYS SER ASN LEU SEQRES 11 A 241 GLN GLY LEU SER ARG GLU ASP PHE ILE GLU GLU THR VAL SEQRES 12 A 241 LYS LEU PHE SER PHE LEU ASN TYR ILE HIS PRO PHE ARG SEQRES 13 A 241 ALA GLY ASN GLU ALA VAL GLN HIS ILE PHE PHE GLU LYS SEQRES 14 A 241 LEU ALA GLU ALA ALA GLY HIS LYS LEU ASP PHE SER VAL SEQRES 15 A 241 VAL THR GLU GLU ARG ILE MET ARG ALA CYS ASN ASP ALA SEQRES 16 A 241 MET ALA LEU LYS GLY GLU GLU ALA HIS GLN ALA MET LYS SEQRES 17 A 241 SER LEU PHE GLU ASP ILE SER ASN PRO GLU GLU VAL ILE SEQRES 18 A 241 ILE LEU ARG ASP PHE PHE LYS HIS ILE PRO ARG VAL GLU SEQRES 19 A 241 ARG GLN ARG LEU ASN ASP GLU HET EDO A 301 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 HOH *271(H2 O) HELIX 1 1 HIS A 6 ASN A 11 1 6 HELIX 2 2 GLY A 28 ARG A 48 1 21 HELIX 3 3 ASP A 57 GLY A 70 1 14 HELIX 4 4 HIS A 108 LYS A 126 1 19 HELIX 5 5 SER A 127 GLN A 130 5 4 HELIX 6 6 SER A 133 HIS A 152 1 20 HELIX 7 7 GLY A 157 GLY A 174 1 18 HELIX 8 8 ASP A 178 VAL A 182 5 5 HELIX 9 9 THR A 183 LEU A 197 1 15 HELIX 10 10 LYS A 198 SER A 214 1 17 HELIX 11 11 ASN A 215 ILE A 220 5 6 SHEET 1 A 2 PHE A 84 ALA A 85 0 SHEET 2 A 2 ILE A 91 ALA A 92 -1 O ALA A 92 N PHE A 84 SITE 1 AC1 3 GLU A 167 SER A 180 HOH A 428 CRYST1 40.240 47.480 67.970 90.00 105.64 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024851 0.000000 0.006955 0.00000 SCALE2 0.000000 0.021062 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015278 0.00000