HEADER HORMONE 07-AUG-13 4M4J TITLE RADIATION DAMAGE STUDY OF CU T6-INSULIN - 0.30 MGY COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: INSULIN A CHAIN (UNP RESIDUES 85-105); COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: INSULIN; COMPND 7 CHAIN: B, D; COMPND 8 FRAGMENT: INSULIN B CHAIN (UNP RESIDUES 25-54) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 7 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 8 ORGANISM_TAXID: 9913 KEYWDS HORMONE, COPPER BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.G.FRANKAER,P.HARRIS,K.STAHL REVDAT 4 07-MAR-18 4M4J 1 REMARK REVDAT 3 15-NOV-17 4M4J 1 REMARK REVDAT 2 12-FEB-14 4M4J 1 JRNL REVDAT 1 15-JAN-14 4M4J 0 JRNL AUTH C.G.FRANKAER,S.MOSSIN,K.STAHL,P.HARRIS JRNL TITL TOWARDS ACCURATE STRUCTURAL CHARACTERIZATION OF METAL JRNL TITL 2 CENTRES IN PROTEIN CRYSTALS: THE STRUCTURES OF NI AND CU T6 JRNL TITL 3 BOVINE INSULIN DERIVATIVES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 110 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24419384 JRNL DOI 10.1107/S1399004713029040 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 6337 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.620 REMARK 3 FREE R VALUE TEST SET COUNT : 293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.7468 - 2.3934 1.00 3010 151 0.1607 0.2046 REMARK 3 2 2.3934 - 1.9000 1.00 3034 142 0.1875 0.2651 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 829 REMARK 3 ANGLE : 1.034 1119 REMARK 3 CHIRALITY : 0.075 124 REMARK 3 PLANARITY : 0.004 146 REMARK 3 DIHEDRAL : 15.584 290 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6991 -13.3581 2.2360 REMARK 3 T TENSOR REMARK 3 T11: 0.1776 T22: 0.3635 REMARK 3 T33: 0.1961 T12: -0.0875 REMARK 3 T13: 0.0020 T23: 0.0900 REMARK 3 L TENSOR REMARK 3 L11: 7.9565 L22: 7.8633 REMARK 3 L33: 3.2655 L12: 3.0655 REMARK 3 L13: -0.6776 L23: -1.6848 REMARK 3 S TENSOR REMARK 3 S11: -0.2299 S12: -0.0895 S13: -0.1983 REMARK 3 S21: -0.1792 S22: 0.1686 S23: 0.8354 REMARK 3 S31: 0.6729 S32: -0.9790 S33: 0.0673 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 13:19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4435 -19.9293 -6.6349 REMARK 3 T TENSOR REMARK 3 T11: 0.2108 T22: 0.0606 REMARK 3 T33: 0.2432 T12: -0.0140 REMARK 3 T13: -0.0110 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 1.1734 L22: 6.0406 REMARK 3 L33: 2.4695 L12: 0.0699 REMARK 3 L13: 0.7429 L23: -1.7532 REMARK 3 S TENSOR REMARK 3 S11: 0.0245 S12: -0.0769 S13: -0.1647 REMARK 3 S21: 0.0146 S22: 0.0717 S23: 0.3227 REMARK 3 S31: 0.1566 S32: -0.1401 S33: -0.1008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 9:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7818 -9.0093 -9.6576 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.0699 REMARK 3 T33: 0.0837 T12: 0.0105 REMARK 3 T13: -0.0304 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 2.7508 L22: 3.0741 REMARK 3 L33: 6.6752 L12: -0.5990 REMARK 3 L13: 0.0717 L23: 4.4167 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: 0.2162 S13: 0.2238 REMARK 3 S21: -0.3136 S22: -0.1312 S23: -0.0414 REMARK 3 S31: -0.2318 S32: -0.2060 S33: 0.0697 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 23:27 ) OR CHAIN D AND (RESID REMARK 3 23:27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5825 -12.1675 -11.2344 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.1107 REMARK 3 T33: 0.0746 T12: -0.0694 REMARK 3 T13: -0.0694 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 4.1752 L22: 1.5845 REMARK 3 L33: 1.9385 L12: -0.5472 REMARK 3 L13: 1.2032 L23: 1.0210 REMARK 3 S TENSOR REMARK 3 S11: 0.1547 S12: -0.1262 S13: -0.2708 REMARK 3 S21: 0.1561 S22: -0.0375 S23: 0.0152 REMARK 3 S31: 0.3754 S32: -0.2774 S33: -0.0993 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN C AND (RESID 1:8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6536 -5.0481 -24.1063 REMARK 3 T TENSOR REMARK 3 T11: 0.2496 T22: 0.3387 REMARK 3 T33: 0.1032 T12: 0.0194 REMARK 3 T13: -0.0490 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 2.0452 L22: 3.5904 REMARK 3 L33: 2.4211 L12: 0.2287 REMARK 3 L13: 0.2228 L23: -2.8985 REMARK 3 S TENSOR REMARK 3 S11: -0.1826 S12: 0.4615 S13: 0.0777 REMARK 3 S21: -0.7887 S22: -0.0745 S23: 0.3809 REMARK 3 S31: 0.0045 S32: -0.4895 S33: 0.2346 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN C AND (RESID 13:19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9591 -1.7983 -15.3367 REMARK 3 T TENSOR REMARK 3 T11: 0.1306 T22: 0.3286 REMARK 3 T33: 0.1456 T12: 0.0112 REMARK 3 T13: 0.0253 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 9.6397 L22: 8.7812 REMARK 3 L33: 9.3594 L12: 0.6602 REMARK 3 L13: -0.5942 L23: -1.2680 REMARK 3 S TENSOR REMARK 3 S11: 0.2910 S12: 0.0533 S13: 0.5320 REMARK 3 S21: 0.0509 S22: 0.0422 S23: 0.3592 REMARK 3 S31: -0.5549 S32: -0.6495 S33: -0.2826 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN D AND (RESID 9:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3349 -2.7364 -11.7942 REMARK 3 T TENSOR REMARK 3 T11: 0.0600 T22: 0.0884 REMARK 3 T33: 0.0790 T12: -0.0056 REMARK 3 T13: -0.0125 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 6.1081 L22: 2.6245 REMARK 3 L33: 7.7088 L12: 0.2183 REMARK 3 L13: -6.8557 L23: -0.4390 REMARK 3 S TENSOR REMARK 3 S11: 0.0867 S12: -0.3490 S13: 0.1801 REMARK 3 S21: 0.1410 S22: 0.0265 S23: -0.1232 REMARK 3 S31: -0.0918 S32: 0.2942 S33: -0.1034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : CU FINE FOCUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYERED MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : AGILENT ATLAS CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6340 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 16.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M SODIUM CITRATE, 15%(V/V) REMARK 280 ACETONE, 7.5MM COPPER(II)ACETATE, PH 7.1, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.32500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.28165 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.10433 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 40.32500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.28165 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.10433 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 40.32500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.28165 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.10433 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.56330 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 22.20867 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.56330 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 22.20867 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.56330 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 22.20867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CU CU B 101 LIES ON A SPECIAL POSITION. REMARK 375 CU CU D 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 212 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 224 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE B 1 REMARK 465 ALA B 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN D 4 O HOH D 218 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 206 O HOH B 211 2555 2.14 REMARK 500 O HOH A 102 O HOH D 201 1556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -129.34 -119.06 REMARK 500 SER C 9 -156.54 -87.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 10 NE2 REMARK 620 2 HOH B 206 O 163.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M4F RELATED DB: PDB REMARK 900 RELATED ID: 4M4H RELATED DB: PDB REMARK 900 RELATED ID: 4M4I RELATED DB: PDB REMARK 900 RELATED ID: 4M4L RELATED DB: PDB REMARK 900 RELATED ID: 4M4M RELATED DB: PDB DBREF 4M4J A 1 21 UNP P01317 INS_BOVIN 85 105 DBREF 4M4J B 1 30 UNP P01317 INS_BOVIN 25 54 DBREF 4M4J C 1 21 UNP P01317 INS_BOVIN 85 105 DBREF 4M4J D 1 30 UNP P01317 INS_BOVIN 25 54 SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS ALA SER VAL CYS SER LEU SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 30 THR PRO LYS ALA SEQRES 1 C 21 GLY ILE VAL GLU GLN CYS CYS ALA SER VAL CYS SER LEU SEQRES 2 C 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 D 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 D 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 D 30 THR PRO LYS ALA HET CU B 101 1 HET CU D 101 1 HETNAM CU COPPER (II) ION FORMUL 5 CU 2(CU 2+) FORMUL 7 HOH *56(H2 O) HELIX 1 1 GLY A 1 SER A 9 1 9 HELIX 2 2 SER A 12 GLU A 17 1 6 HELIX 3 3 ASN A 18 CYS A 20 5 3 HELIX 4 4 GLY B 8 GLY B 20 1 13 HELIX 5 5 GLU B 21 GLY B 23 5 3 HELIX 6 6 ILE C 2 CYS C 7 1 6 HELIX 7 7 SER C 12 GLU C 17 1 6 HELIX 8 8 ASN C 18 CYS C 20 5 3 HELIX 9 9 GLY D 8 GLY D 20 1 13 HELIX 10 10 GLU D 21 GLY D 23 5 3 SHEET 1 A 2 PHE B 24 TYR B 26 0 SHEET 2 A 2 PHE D 24 TYR D 26 -1 O TYR D 26 N PHE B 24 SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.02 SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.02 SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.05 SSBOND 4 CYS C 6 CYS C 11 1555 1555 2.03 SSBOND 5 CYS C 7 CYS D 7 1555 1555 2.02 SSBOND 6 CYS C 20 CYS D 19 1555 1555 2.02 LINK NE2 HIS D 10 CU CU D 101 1555 1555 1.98 LINK NE2 HIS B 10 CU CU B 101 1555 1555 2.02 LINK CU CU B 101 O HOH B 206 1555 1555 2.15 SITE 1 AC1 2 HIS B 10 HOH B 206 SITE 1 AC2 1 HIS D 10 CRYST1 80.650 80.650 33.313 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012399 0.007159 0.000000 0.00000 SCALE2 0.000000 0.014317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030018 0.00000