HEADER OXIDOREDUCTASE 08-AUG-13 4M5P TITLE OYE2.6 Y78W, I113C COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADPH DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHEFFERSOMYCES STIPITIS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 322104; SOURCE 5 STRAIN: CBS 6054; SOURCE 6 GENE: OYE2.6, PICST_44614; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET26B(+); SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBS3 KEYWDS TIM BARREL, ALKENE REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.SULLIVAN,J.D.STEWART REVDAT 4 20-SEP-23 4M5P 1 REMARK SEQADV LINK REVDAT 3 29-APR-15 4M5P 1 HETSYN REVDAT 2 24-SEP-14 4M5P 1 JRNL REVDAT 1 25-JUN-14 4M5P 0 JRNL AUTH A.Z.WALTON,B.SULLIVAN,A.C.PATTERSON-ORAZEM,J.D.STEWART JRNL TITL RESIDUES CONTROLLING FACIAL SELECTIVITY IN AN ALKENE JRNL TITL 2 REDUCTASE AND SEMIRATIONAL ALTERATIONS TO CREATE JRNL TITL 3 STEREOCOMPLEMENTARY VARIANTS. JRNL REF ACS CATALYSIS V. 4 2307 2014 JRNL REFN ESSN 2155-5435 JRNL PMID 25068071 JRNL DOI 10.1021/CS500429K REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 91578 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0204 - 4.6675 0.93 2843 317 0.1643 0.1668 REMARK 3 2 4.6675 - 3.7061 0.98 2811 312 0.1298 0.1431 REMARK 3 3 3.7061 - 3.2380 0.99 2830 313 0.1425 0.1658 REMARK 3 4 3.2380 - 2.9421 1.00 2800 312 0.1616 0.1816 REMARK 3 5 2.9421 - 2.7313 1.00 2801 312 0.1620 0.1791 REMARK 3 6 2.7313 - 2.5703 1.00 2799 310 0.1557 0.1838 REMARK 3 7 2.5703 - 2.4416 1.00 2775 308 0.1499 0.1817 REMARK 3 8 2.4416 - 2.3354 1.00 2771 308 0.1377 0.1630 REMARK 3 9 2.3354 - 2.2455 1.00 2755 306 0.1395 0.1590 REMARK 3 10 2.2455 - 2.1680 1.00 2753 306 0.1265 0.1597 REMARK 3 11 2.1680 - 2.1002 1.00 2750 305 0.1300 0.1569 REMARK 3 12 2.1002 - 2.0402 1.00 2749 307 0.1301 0.1612 REMARK 3 13 2.0402 - 1.9865 1.00 2761 305 0.1325 0.1684 REMARK 3 14 1.9865 - 1.9380 1.00 2740 305 0.1375 0.1735 REMARK 3 15 1.9380 - 1.8940 1.00 2749 306 0.1374 0.1949 REMARK 3 16 1.8940 - 1.8537 1.00 2753 305 0.1328 0.1727 REMARK 3 17 1.8537 - 1.8166 1.00 2736 304 0.1306 0.1762 REMARK 3 18 1.8166 - 1.7823 1.00 2710 302 0.1297 0.1720 REMARK 3 19 1.7823 - 1.7505 1.00 2755 305 0.1275 0.1654 REMARK 3 20 1.7505 - 1.7208 1.00 2747 306 0.1268 0.1760 REMARK 3 21 1.7208 - 1.6931 1.00 2724 303 0.1243 0.1837 REMARK 3 22 1.6931 - 1.6670 1.00 2725 302 0.1264 0.1726 REMARK 3 23 1.6670 - 1.6425 1.00 2737 304 0.1192 0.1674 REMARK 3 24 1.6425 - 1.6194 1.00 2711 302 0.1242 0.1646 REMARK 3 25 1.6194 - 1.5975 1.00 2753 305 0.1197 0.1738 REMARK 3 26 1.5975 - 1.5767 1.00 2718 303 0.1229 0.1882 REMARK 3 27 1.5767 - 1.5570 1.00 2720 302 0.1303 0.1705 REMARK 3 28 1.5570 - 1.5383 1.00 2727 301 0.1384 0.2009 REMARK 3 29 1.5383 - 1.5204 1.00 2730 305 0.1353 0.1948 REMARK 3 30 1.5204 - 1.5033 0.91 2488 276 0.1486 0.1995 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3394 REMARK 3 ANGLE : 1.086 4637 REMARK 3 CHIRALITY : 0.080 511 REMARK 3 PLANARITY : 0.005 602 REMARK 3 DIHEDRAL : 15.071 1262 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M5P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081498. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111288 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 31.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.04600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3TJL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.65350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.65350 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.65350 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 61.65350 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.65350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 61.65350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 246.61400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 610 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 742 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 919 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1014 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 406 REMARK 465 LEU A 407 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 231 CA CB CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 67 154.37 -45.50 REMARK 500 ILE A 85 51.95 -144.55 REMARK 500 PHE A 114 119.60 -162.55 REMARK 500 ALA A 252 -122.11 54.76 REMARK 500 SER A 346 -66.79 -95.07 REMARK 500 ASN A 354 33.04 -93.90 REMARK 500 TYR A 381 -87.59 -108.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 104 OD1 REMARK 620 2 HOH A 671 O 90.3 REMARK 620 3 HOH A 822 O 85.5 90.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 335 O REMARK 620 2 ASP A 338 OD2 122.4 REMARK 620 3 THR A 341 OG1 73.0 68.9 REMARK 620 4 HOH A 682 O 79.1 84.3 119.8 REMARK 620 5 HOH A 858 O 112.3 80.5 57.4 164.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 23W A 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TJL RELATED DB: PDB REMARK 900 OYE2.6 WILD TYPE DBREF 4M5P A 1 407 UNP A3LT82 A3LT82_PICST 1 407 SEQADV 4M5P TRP A 78 UNP A3LT82 TYR 78 ENGINEERED MUTATION SEQADV 4M5P CSD A 113 UNP A3LT82 ILE 113 MICROHETEROGENEITY SEQADV 4M5P CYS A 113 UNP A3LT82 ILE 113 MICROHETEROGENEITY SEQADV 4M5P ALA A 169 UNP A3LT82 THR 169 CONFLICT SEQRES 1 A 407 MET SER SER VAL LYS ILE SER PRO LEU LYS ASP SER GLU SEQRES 2 A 407 ALA PHE GLN SER ILE LYS VAL GLY ASN ASN THR LEU GLN SEQRES 3 A 407 THR LYS ILE VAL TYR PRO PRO THR THR ARG PHE ARG ALA SEQRES 4 A 407 LEU GLU ASP HIS THR PRO SER ASP LEU GLN LEU GLN TYR SEQRES 5 A 407 TYR GLY ASP ARG SER THR PHE PRO GLY THR LEU LEU ILE SEQRES 6 A 407 THR GLU ALA THR PHE VAL SER PRO GLN ALA SER GLY TRP SEQRES 7 A 407 GLU GLY ALA ALA PRO GLY ILE TRP THR ASP LYS HIS ALA SEQRES 8 A 407 LYS ALA TRP LYS VAL ILE THR ASP LYS VAL HIS ALA ASN SEQRES 9 A 407 GLY SER PHE VAL SER THR GLN LEU CSD PHE LEU GLY ARG SEQRES 10 A 407 VAL ALA ASP PRO ALA VAL MET LYS THR ARG GLY LEU ASN SEQRES 11 A 407 PRO VAL SER ALA SER ALA THR TYR GLU SER ASP ALA ALA SEQRES 12 A 407 LYS GLU ALA ALA GLU ALA VAL GLY ASN PRO VAL ARG ALA SEQRES 13 A 407 LEU THR THR GLN GLU VAL LYS ASP LEU VAL TYR GLU ALA SEQRES 14 A 407 TYR THR ASN ALA ALA GLN LYS ALA MET ASP ALA GLY PHE SEQRES 15 A 407 ASP TYR ILE GLU LEU HIS ALA ALA HIS GLY TYR LEU LEU SEQRES 16 A 407 ASP GLN PHE LEU GLN PRO CYS THR ASN GLN ARG THR ASP SEQRES 17 A 407 GLU TYR GLY GLY SER ILE GLU ASN ARG ALA ARG LEU ILE SEQRES 18 A 407 LEU GLU LEU ILE ASP HIS LEU SER THR ILE VAL GLY ALA SEQRES 19 A 407 ASP LYS ILE GLY ILE ARG ILE SER PRO TRP ALA THR PHE SEQRES 20 A 407 GLN ASN MET LYS ALA HIS LYS ASP THR VAL HIS PRO LEU SEQRES 21 A 407 THR THR PHE SER TYR LEU VAL HIS GLU LEU GLN GLN ARG SEQRES 22 A 407 ALA ASP LYS GLY GLN GLY ILE ALA TYR ILE SER VAL VAL SEQRES 23 A 407 GLU PRO ARG VAL SER GLY ASN VAL ASP VAL SER GLU GLU SEQRES 24 A 407 ASP GLN ALA GLY ASP ASN GLU PHE VAL SER LYS ILE TRP SEQRES 25 A 407 LYS GLY VAL ILE LEU LYS ALA GLY ASN TYR SER TYR ASP SEQRES 26 A 407 ALA PRO GLU PHE LYS THR LEU LYS GLU ASP ILE ALA ASP SEQRES 27 A 407 LYS ARG THR LEU VAL GLY PHE SER ARG TYR PHE THR SER SEQRES 28 A 407 ASN PRO ASN LEU VAL TRP LYS LEU ARG ASP GLY ILE ASP SEQRES 29 A 407 LEU VAL PRO TYR ASP ARG ASN THR PHE TYR SER ASP ASN SEQRES 30 A 407 ASN TYR GLY TYR ASN THR PHE SER MET ASP SER GLU GLU SEQRES 31 A 407 VAL ASP LYS GLU LEU GLU ILE LYS ARG VAL PRO SER ALA SEQRES 32 A 407 ILE GLU ALA LEU MODRES 4M5P CSD A 113 CYS 3-SULFINOALANINE HET CSD A 113 8 HET FMN A 501 31 HET MLA A 502 7 HET MLA A 503 7 HET NA A 504 1 HET NA A 505 1 HET NA A 506 1 HET MLA A 507 7 HET 23W A 508 8 HETNAM CSD 3-SULFINOALANINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM MLA MALONIC ACID HETNAM NA SODIUM ION HETNAM 23W METHYL 2-(HYDROXYMETHYL)PROP-2-ENOATE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID HETSYN 23W METHYL 2-(HYDROXYMETHYL)ACRYLATE FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 MLA 3(C3 H4 O4) FORMUL 5 NA 3(NA 1+) FORMUL 9 23W C5 H8 O3 FORMUL 10 HOH *540(H2 O) HELIX 1 1 SER A 12 GLN A 16 5 5 HELIX 2 2 SER A 46 ARG A 56 1 11 HELIX 3 3 SER A 72 SER A 76 5 5 HELIX 4 4 THR A 87 ASN A 104 1 18 HELIX 5 5 LEU A 115 ALA A 119 5 5 HELIX 6 6 ASP A 120 ARG A 127 1 8 HELIX 7 7 SER A 140 VAL A 150 1 11 HELIX 8 8 THR A 158 GLU A 168 1 11 HELIX 9 9 GLU A 168 ALA A 180 1 13 HELIX 10 10 TYR A 193 GLN A 200 1 8 HELIX 11 11 SER A 213 GLY A 233 1 21 HELIX 12 12 THR A 246 MET A 250 5 5 HELIX 13 13 LYS A 251 ASP A 255 5 5 HELIX 14 14 HIS A 258 LYS A 276 1 19 HELIX 15 15 ASN A 305 TRP A 312 1 8 HELIX 16 16 ASN A 321 ALA A 326 5 6 HELIX 17 17 PHE A 329 ALA A 337 1 9 HELIX 18 18 SER A 346 ASN A 352 1 7 HELIX 19 19 ASN A 354 GLY A 362 1 9 HELIX 20 20 ASP A 369 PHE A 373 5 5 HELIX 21 21 TYR A 381 MET A 386 5 6 HELIX 22 22 ASP A 387 VAL A 391 5 5 HELIX 23 23 ASP A 392 LYS A 398 1 7 SHEET 1 A 2 ILE A 18 VAL A 20 0 SHEET 2 A 2 ASN A 23 LEU A 25 -1 O ASN A 23 N VAL A 20 SHEET 1 B 8 ILE A 29 VAL A 30 0 SHEET 2 B 8 THR A 341 GLY A 344 1 O VAL A 343 N VAL A 30 SHEET 3 B 8 VAL A 315 ALA A 319 1 N ILE A 316 O LEU A 342 SHEET 4 B 8 TYR A 282 VAL A 286 1 N VAL A 285 O LEU A 317 SHEET 5 B 8 ILE A 237 ILE A 241 1 N ILE A 239 O SER A 284 SHEET 6 B 8 TYR A 184 ALA A 189 1 N ILE A 185 O GLY A 238 SHEET 7 B 8 PHE A 107 CSD A 113 1 N THR A 110 O GLU A 186 SHEET 8 B 8 LEU A 63 ILE A 65 1 N LEU A 64 O PHE A 107 SHEET 1 C 8 ILE A 29 VAL A 30 0 SHEET 2 C 8 THR A 341 GLY A 344 1 O VAL A 343 N VAL A 30 SHEET 3 C 8 VAL A 315 ALA A 319 1 N ILE A 316 O LEU A 342 SHEET 4 C 8 TYR A 282 VAL A 286 1 N VAL A 285 O LEU A 317 SHEET 5 C 8 ILE A 237 ILE A 241 1 N ILE A 239 O SER A 284 SHEET 6 C 8 TYR A 184 ALA A 189 1 N ILE A 185 O GLY A 238 SHEET 7 C 8 PHE A 107 CSD A 113 1 N THR A 110 O GLU A 186 SHEET 8 C 8 THR A 69 PHE A 70 1 N THR A 69 O CSD A 113 SHEET 1 D 2 VAL A 132 SER A 133 0 SHEET 2 D 2 ARG A 155 ALA A 156 1 O ARG A 155 N SER A 133 SHEET 1 E 2 VAL A 290 SER A 291 0 SHEET 2 E 2 VAL A 294 ASP A 295 -1 O VAL A 294 N SER A 291 LINK C LEU A 112 N BCSD A 113 1555 1555 1.33 LINK C BCSD A 113 N PHE A 114 1555 1555 1.33 LINK OD1 ASN A 104 NA NA A 504 1555 1555 2.49 LINK O ASP A 335 NA NA A 505 1555 1555 2.46 LINK OD2 ASP A 338 NA NA A 505 1555 1555 2.53 LINK OG1 THR A 341 NA NA A 505 1555 1555 3.15 LINK NA NA A 504 O HOH A 671 1555 1555 2.33 LINK NA NA A 504 O HOH A 822 1555 1555 2.45 LINK NA NA A 505 O HOH A 682 1555 1555 2.42 LINK NA NA A 505 O HOH A 858 1555 1555 2.39 LINK NA NA A 506 O HOH A1087 1555 1555 2.34 CISPEP 1 ALA A 326 PRO A 327 0 6.54 SITE 1 AC1 22 PRO A 32 PRO A 33 THR A 34 THR A 35 SITE 2 AC1 22 ALA A 68 GLN A 111 HIS A 188 HIS A 191 SITE 3 AC1 22 ARG A 240 GLY A 292 ASN A 321 PHE A 345 SITE 4 AC1 22 SER A 346 ARG A 347 PHE A 373 TYR A 374 SITE 5 AC1 22 MLA A 507 23W A 508 HOH A 632 HOH A 633 SITE 6 AC1 22 HOH A 635 HOH A 661 SITE 1 AC2 9 GLU A 41 HIS A 43 SER A 76 VAL A 123 SITE 2 AC2 9 ARG A 127 HOH A 697 HOH A 878 HOH A1031 SITE 3 AC2 9 HOH A1074 SITE 1 AC3 9 ARG A 347 TYR A 368 ARG A 370 TYR A 379 SITE 2 AC3 9 LYS A 393 HOH A 663 HOH A 729 HOH A 911 SITE 3 AC3 9 HOH A1131 SITE 1 AC4 7 GLN A 26 ASN A 104 NA A 506 HOH A 649 SITE 2 AC4 7 HOH A 671 HOH A 765 HOH A 822 SITE 1 AC5 5 ASP A 335 ASP A 338 THR A 341 HOH A 682 SITE 2 AC5 5 HOH A 858 SITE 1 AC6 6 THR A 58 ASN A 104 NA A 504 HOH A 822 SITE 2 AC6 6 HOH A 947 HOH A1087 SITE 1 AC7 6 HIS A 188 HIS A 191 TYR A 193 ASN A 293 SITE 2 AC7 6 TYR A 374 FMN A 501 SITE 1 AC8 12 THR A 35 ALA A 68 TRP A 78 CSD A 113 SITE 2 AC8 12 HIS A 188 HIS A 191 TYR A 193 GLY A 292 SITE 3 AC8 12 ASN A 293 TYR A 374 FMN A 501 HOH A1140 CRYST1 126.487 126.487 123.307 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007906 0.004565 0.000000 0.00000 SCALE2 0.000000 0.009129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008110 0.00000