data_4M6T # _entry.id 4M6T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4M6T pdb_00004m6t 10.2210/pdb4m6t/pdb RCSB RCSB081538 ? ? WWPDB D_1000081538 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-02 2 'Structure model' 1 1 2013-12-25 3 'Structure model' 1 2 2017-06-28 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Source and taxonomy' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4M6T _pdbx_database_status.recvd_initial_deposition_date 2013-08-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shen, Y.' 1 'Qin, X.' 2 # _citation.id primary _citation.title 'Structural insights into Paf1 complex assembly and histone binding' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 10619 _citation.page_last 10629 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24038468 _citation.pdbx_database_id_DOI 10.1093/nar/gkt819 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chu, X.' 1 ? primary 'Qin, X.' 2 ? primary 'Xu, H.' 3 ? primary 'Li, L.' 4 ? primary 'Wang, Z.' 5 ? primary 'Li, F.' 6 ? primary 'Xie, X.' 7 ? primary 'Zhou, H.' 8 ? primary 'Shen, Y.' 9 ? primary 'Long, J.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA polymerase II-associated factor 1 homolog, Linker, RNA polymerase-associated protein LEO1' 21270.889 1 ? ? 'UNP residues 170-250 of Paf1, UNP residues 370-462 of LEO1' 'chimera of RNA polymerase II-associated factor 1 homolog, Linker, RNA polymerase-associated protein LEO1' 2 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 3 water nat water 18.015 4 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGM MSGENLYFQSGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEGNEIKESNAR IVKWSDGSMSLHLGNEVFDVYKA ; _entity_poly.pdbx_seq_one_letter_code_can ;KDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGM MSGENLYFQSGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEGNEIKESNAR IVKWSDGSMSLHLGNEVFDVYKA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYLMETHIONINE SAM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ASP n 1 3 ARG n 1 4 ASP n 1 5 SER n 1 6 GLN n 1 7 ILE n 1 8 THR n 1 9 ALA n 1 10 ILE n 1 11 GLU n 1 12 LYS n 1 13 THR n 1 14 PHE n 1 15 GLU n 1 16 ASP n 1 17 ALA n 1 18 GLN n 1 19 LYS n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 GLN n 1 24 HIS n 1 25 TYR n 1 26 SER n 1 27 LYS n 1 28 PRO n 1 29 ARG n 1 30 VAL n 1 31 THR n 1 32 PRO n 1 33 VAL n 1 34 GLU n 1 35 VAL n 1 36 MET n 1 37 PRO n 1 38 VAL n 1 39 PHE n 1 40 PRO n 1 41 ASP n 1 42 PHE n 1 43 LYS n 1 44 MET n 1 45 TRP n 1 46 ILE n 1 47 ASN n 1 48 PRO n 1 49 CYS n 1 50 ALA n 1 51 GLN n 1 52 VAL n 1 53 ILE n 1 54 PHE n 1 55 ASP n 1 56 SER n 1 57 ASP n 1 58 PRO n 1 59 ALA n 1 60 PRO n 1 61 LYS n 1 62 ASP n 1 63 THR n 1 64 SER n 1 65 GLY n 1 66 ALA n 1 67 ALA n 1 68 ALA n 1 69 LEU n 1 70 GLU n 1 71 MET n 1 72 MET n 1 73 SER n 1 74 GLN n 1 75 ALA n 1 76 MET n 1 77 ILE n 1 78 ARG n 1 79 GLY n 1 80 MET n 1 81 MET n 1 82 SER n 1 83 GLY n 1 84 GLU n 1 85 ASN n 1 86 LEU n 1 87 TYR n 1 88 PHE n 1 89 GLN n 1 90 SER n 1 91 GLY n 1 92 ASN n 1 93 ASP n 1 94 LEU n 1 95 TYR n 1 96 PHE n 1 97 VAL n 1 98 LYS n 1 99 LEU n 1 100 PRO n 1 101 ASN n 1 102 PHE n 1 103 LEU n 1 104 SER n 1 105 VAL n 1 106 GLU n 1 107 PRO n 1 108 ARG n 1 109 PRO n 1 110 PHE n 1 111 ASP n 1 112 PRO n 1 113 GLN n 1 114 TYR n 1 115 TYR n 1 116 GLU n 1 117 ASP n 1 118 GLU n 1 119 PHE n 1 120 GLU n 1 121 ASP n 1 122 GLU n 1 123 GLU n 1 124 MET n 1 125 LEU n 1 126 ASP n 1 127 GLU n 1 128 GLU n 1 129 GLY n 1 130 ARG n 1 131 THR n 1 132 ARG n 1 133 LEU n 1 134 LYS n 1 135 LEU n 1 136 LYS n 1 137 VAL n 1 138 GLU n 1 139 ASN n 1 140 THR n 1 141 ILE n 1 142 ARG n 1 143 TRP n 1 144 ARG n 1 145 ILE n 1 146 ARG n 1 147 ARG n 1 148 ASP n 1 149 GLU n 1 150 GLU n 1 151 GLY n 1 152 ASN n 1 153 GLU n 1 154 ILE n 1 155 LYS n 1 156 GLU n 1 157 SER n 1 158 ASN n 1 159 ALA n 1 160 ARG n 1 161 ILE n 1 162 VAL n 1 163 LYS n 1 164 TRP n 1 165 SER n 1 166 ASP n 1 167 GLY n 1 168 SER n 1 169 MET n 1 170 SER n 1 171 LEU n 1 172 HIS n 1 173 LEU n 1 174 GLY n 1 175 ASN n 1 176 GLU n 1 177 VAL n 1 178 PHE n 1 179 ASP n 1 180 VAL n 1 181 TYR n 1 182 LYS n 1 183 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 81 human ? 'PAF1, LEO1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 91 183 human ? 'PAF1, LEO1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 10 10 LYS LYS A . n A 1 2 ASP 2 11 11 ASP ASP A . n A 1 3 ARG 3 12 12 ARG ARG A . n A 1 4 ASP 4 13 13 ASP ASP A . n A 1 5 SER 5 14 14 SER SER A . n A 1 6 GLN 6 15 15 GLN GLN A . n A 1 7 ILE 7 16 16 ILE ILE A . n A 1 8 THR 8 17 17 THR THR A . n A 1 9 ALA 9 18 18 ALA ALA A . n A 1 10 ILE 10 19 19 ILE ILE A . n A 1 11 GLU 11 20 20 GLU GLU A . n A 1 12 LYS 12 21 21 LYS LYS A . n A 1 13 THR 13 22 22 THR THR A . n A 1 14 PHE 14 23 23 PHE PHE A . n A 1 15 GLU 15 24 24 GLU GLU A . n A 1 16 ASP 16 25 25 ASP ASP A . n A 1 17 ALA 17 26 26 ALA ALA A . n A 1 18 GLN 18 27 27 GLN GLN A . n A 1 19 LYS 19 28 28 LYS LYS A . n A 1 20 SER 20 29 29 SER SER A . n A 1 21 ILE 21 30 30 ILE ILE A . n A 1 22 SER 22 31 31 SER SER A . n A 1 23 GLN 23 32 32 GLN GLN A . n A 1 24 HIS 24 33 33 HIS HIS A . n A 1 25 TYR 25 34 34 TYR TYR A . n A 1 26 SER 26 35 35 SER SER A . n A 1 27 LYS 27 36 36 LYS LYS A . n A 1 28 PRO 28 37 37 PRO PRO A . n A 1 29 ARG 29 38 38 ARG ARG A . n A 1 30 VAL 30 39 39 VAL VAL A . n A 1 31 THR 31 40 40 THR THR A . n A 1 32 PRO 32 41 41 PRO PRO A . n A 1 33 VAL 33 42 42 VAL VAL A . n A 1 34 GLU 34 43 43 GLU GLU A . n A 1 35 VAL 35 44 44 VAL VAL A . n A 1 36 MET 36 45 45 MET MET A . n A 1 37 PRO 37 46 46 PRO PRO A . n A 1 38 VAL 38 47 47 VAL VAL A . n A 1 39 PHE 39 48 48 PHE PHE A . n A 1 40 PRO 40 49 49 PRO PRO A . n A 1 41 ASP 41 50 50 ASP ASP A . n A 1 42 PHE 42 51 51 PHE PHE A . n A 1 43 LYS 43 52 52 LYS LYS A . n A 1 44 MET 44 53 53 MET MET A . n A 1 45 TRP 45 54 54 TRP TRP A . n A 1 46 ILE 46 55 55 ILE ILE A . n A 1 47 ASN 47 56 56 ASN ASN A . n A 1 48 PRO 48 57 57 PRO PRO A . n A 1 49 CYS 49 58 58 CYS CYS A . n A 1 50 ALA 50 59 59 ALA ALA A . n A 1 51 GLN 51 60 60 GLN GLN A . n A 1 52 VAL 52 61 61 VAL VAL A . n A 1 53 ILE 53 62 62 ILE ILE A . n A 1 54 PHE 54 63 63 PHE PHE A . n A 1 55 ASP 55 64 64 ASP ASP A . n A 1 56 SER 56 65 65 SER SER A . n A 1 57 ASP 57 66 66 ASP ASP A . n A 1 58 PRO 58 67 67 PRO PRO A . n A 1 59 ALA 59 68 68 ALA ALA A . n A 1 60 PRO 60 69 69 PRO PRO A . n A 1 61 LYS 61 70 70 LYS LYS A . n A 1 62 ASP 62 71 71 ASP ASP A . n A 1 63 THR 63 72 72 THR THR A . n A 1 64 SER 64 73 73 SER SER A . n A 1 65 GLY 65 74 74 GLY GLY A . n A 1 66 ALA 66 75 75 ALA ALA A . n A 1 67 ALA 67 76 76 ALA ALA A . n A 1 68 ALA 68 77 77 ALA ALA A . n A 1 69 LEU 69 78 78 LEU LEU A . n A 1 70 GLU 70 79 79 GLU GLU A . n A 1 71 MET 71 80 80 MET MET A . n A 1 72 MET 72 81 81 MET MET A . n A 1 73 SER 73 82 82 SER SER A . n A 1 74 GLN 74 83 83 GLN GLN A . n A 1 75 ALA 75 84 84 ALA ALA A . n A 1 76 MET 76 85 85 MET MET A . n A 1 77 ILE 77 86 86 ILE ILE A . n A 1 78 ARG 78 87 87 ARG ARG A . n A 1 79 GLY 79 88 88 GLY GLY A . n A 1 80 MET 80 89 89 MET MET A . n A 1 81 MET 81 90 90 MET MET A . n A 1 82 SER 82 91 91 SER SER A . n A 1 83 GLY 83 92 92 GLY GLY A . n A 1 84 GLU 84 93 93 GLU GLU A . n A 1 85 ASN 85 94 94 ASN ASN A . n A 1 86 LEU 86 95 95 LEU LEU A . n A 1 87 TYR 87 96 96 TYR TYR A . n A 1 88 PHE 88 97 97 PHE PHE A . n A 1 89 GLN 89 98 98 GLN GLN A . n A 1 90 SER 90 99 99 SER SER A . n A 1 91 GLY 91 100 100 GLY GLY A . n A 1 92 ASN 92 101 101 ASN ASN A . n A 1 93 ASP 93 102 102 ASP ASP A . n A 1 94 LEU 94 103 103 LEU LEU A . n A 1 95 TYR 95 104 104 TYR TYR A . n A 1 96 PHE 96 105 105 PHE PHE A . n A 1 97 VAL 97 106 106 VAL VAL A . n A 1 98 LYS 98 107 107 LYS LYS A . n A 1 99 LEU 99 108 108 LEU LEU A . n A 1 100 PRO 100 109 109 PRO PRO A . n A 1 101 ASN 101 110 110 ASN ASN A . n A 1 102 PHE 102 111 111 PHE PHE A . n A 1 103 LEU 103 112 112 LEU LEU A . n A 1 104 SER 104 113 113 SER SER A . n A 1 105 VAL 105 114 114 VAL VAL A . n A 1 106 GLU 106 115 115 GLU GLU A . n A 1 107 PRO 107 116 116 PRO PRO A . n A 1 108 ARG 108 117 117 ARG ARG A . n A 1 109 PRO 109 118 118 PRO PRO A . n A 1 110 PHE 110 119 119 PHE PHE A . n A 1 111 ASP 111 120 120 ASP ASP A . n A 1 112 PRO 112 121 121 PRO PRO A . n A 1 113 GLN 113 122 122 GLN GLN A . n A 1 114 TYR 114 123 123 TYR TYR A . n A 1 115 TYR 115 124 124 TYR TYR A . n A 1 116 GLU 116 125 125 GLU GLU A . n A 1 117 ASP 117 126 126 ASP ASP A . n A 1 118 GLU 118 127 127 GLU GLU A . n A 1 119 PHE 119 128 128 PHE PHE A . n A 1 120 GLU 120 129 129 GLU GLU A . n A 1 121 ASP 121 130 ? ? ? A . n A 1 122 GLU 122 131 ? ? ? A . n A 1 123 GLU 123 132 ? ? ? A . n A 1 124 MET 124 133 ? ? ? A . n A 1 125 LEU 125 134 ? ? ? A . n A 1 126 ASP 126 135 ? ? ? A . n A 1 127 GLU 127 136 136 GLU GLU A . n A 1 128 GLU 128 137 137 GLU GLU A . n A 1 129 GLY 129 138 138 GLY GLY A . n A 1 130 ARG 130 139 139 ARG ARG A . n A 1 131 THR 131 140 140 THR THR A . n A 1 132 ARG 132 141 141 ARG ARG A . n A 1 133 LEU 133 142 142 LEU LEU A . n A 1 134 LYS 134 143 143 LYS LYS A . n A 1 135 LEU 135 144 144 LEU LEU A . n A 1 136 LYS 136 145 145 LYS LYS A . n A 1 137 VAL 137 146 146 VAL VAL A . n A 1 138 GLU 138 147 147 GLU GLU A . n A 1 139 ASN 139 148 148 ASN ASN A . n A 1 140 THR 140 149 149 THR THR A . n A 1 141 ILE 141 150 150 ILE ILE A . n A 1 142 ARG 142 151 151 ARG ARG A . n A 1 143 TRP 143 152 152 TRP TRP A . n A 1 144 ARG 144 153 153 ARG ARG A . n A 1 145 ILE 145 154 154 ILE ILE A . n A 1 146 ARG 146 155 155 ARG ARG A . n A 1 147 ARG 147 156 156 ARG ARG A . n A 1 148 ASP 148 157 157 ASP ASP A . n A 1 149 GLU 149 158 158 GLU GLU A . n A 1 150 GLU 150 159 159 GLU GLU A . n A 1 151 GLY 151 160 160 GLY GLY A . n A 1 152 ASN 152 161 161 ASN ASN A . n A 1 153 GLU 153 162 162 GLU GLU A . n A 1 154 ILE 154 163 163 ILE ILE A . n A 1 155 LYS 155 164 164 LYS LYS A . n A 1 156 GLU 156 165 165 GLU GLU A . n A 1 157 SER 157 166 166 SER SER A . n A 1 158 ASN 158 167 167 ASN ASN A . n A 1 159 ALA 159 168 168 ALA ALA A . n A 1 160 ARG 160 169 169 ARG ARG A . n A 1 161 ILE 161 170 170 ILE ILE A . n A 1 162 VAL 162 171 171 VAL VAL A . n A 1 163 LYS 163 172 172 LYS LYS A . n A 1 164 TRP 164 173 173 TRP TRP A . n A 1 165 SER 165 174 174 SER SER A . n A 1 166 ASP 166 175 175 ASP ASP A . n A 1 167 GLY 167 176 176 GLY GLY A . n A 1 168 SER 168 177 177 SER SER A . n A 1 169 MET 169 178 178 MET MET A . n A 1 170 SER 170 179 179 SER SER A . n A 1 171 LEU 171 180 180 LEU LEU A . n A 1 172 HIS 172 181 181 HIS HIS A . n A 1 173 LEU 173 182 182 LEU LEU A . n A 1 174 GLY 174 183 183 GLY GLY A . n A 1 175 ASN 175 184 184 ASN ASN A . n A 1 176 GLU 176 185 185 GLU GLU A . n A 1 177 VAL 177 186 186 VAL VAL A . n A 1 178 PHE 178 187 187 PHE PHE A . n A 1 179 ASP 179 188 188 ASP ASP A . n A 1 180 VAL 180 189 189 VAL VAL A . n A 1 181 TYR 181 190 190 TYR TYR A . n A 1 182 LYS 182 191 191 LYS LYS A . n A 1 183 ALA 183 192 192 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM 1 201 6735 SAM SAM A . C 3 HOH 1 301 2 HOH HOH A . C 3 HOH 2 302 3 HOH HOH A . C 3 HOH 3 303 4 HOH HOH A . C 3 HOH 4 304 5 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 10 ? CG ? A LYS 1 CG 2 1 Y 1 A LYS 10 ? CD ? A LYS 1 CD 3 1 Y 1 A LYS 10 ? CE ? A LYS 1 CE 4 1 Y 1 A LYS 10 ? NZ ? A LYS 1 NZ 5 1 Y 1 A ASP 11 ? CG ? A ASP 2 CG 6 1 Y 1 A ASP 11 ? OD1 ? A ASP 2 OD1 7 1 Y 1 A ASP 11 ? OD2 ? A ASP 2 OD2 8 1 Y 1 A GLU 24 ? CG ? A GLU 15 CG 9 1 Y 1 A GLU 24 ? CD ? A GLU 15 CD 10 1 Y 1 A GLU 24 ? OE1 ? A GLU 15 OE1 11 1 Y 1 A GLU 24 ? OE2 ? A GLU 15 OE2 12 1 Y 1 A TYR 34 ? CG ? A TYR 25 CG 13 1 Y 1 A TYR 34 ? CD1 ? A TYR 25 CD1 14 1 Y 1 A TYR 34 ? CD2 ? A TYR 25 CD2 15 1 Y 1 A TYR 34 ? CE1 ? A TYR 25 CE1 16 1 Y 1 A TYR 34 ? CE2 ? A TYR 25 CE2 17 1 Y 1 A TYR 34 ? CZ ? A TYR 25 CZ 18 1 Y 1 A TYR 34 ? OH ? A TYR 25 OH 19 1 Y 1 A ASP 64 ? CG ? A ASP 55 CG 20 1 Y 1 A ASP 64 ? OD1 ? A ASP 55 OD1 21 1 Y 1 A ASP 64 ? OD2 ? A ASP 55 OD2 22 1 Y 1 A SER 65 ? OG ? A SER 56 OG 23 1 Y 1 A ASP 66 ? CG ? A ASP 57 CG 24 1 Y 1 A ASP 66 ? OD1 ? A ASP 57 OD1 25 1 Y 1 A ASP 66 ? OD2 ? A ASP 57 OD2 26 1 Y 1 A SER 73 ? OG ? A SER 64 OG 27 1 Y 1 A SER 82 ? OG ? A SER 73 OG 28 1 Y 1 A GLN 83 ? CG ? A GLN 74 CG 29 1 Y 1 A GLN 83 ? CD ? A GLN 74 CD 30 1 Y 1 A GLN 83 ? OE1 ? A GLN 74 OE1 31 1 Y 1 A GLN 83 ? NE2 ? A GLN 74 NE2 32 1 Y 1 A ARG 87 ? CG ? A ARG 78 CG 33 1 Y 1 A ARG 87 ? CD ? A ARG 78 CD 34 1 Y 1 A ARG 87 ? NE ? A ARG 78 NE 35 1 Y 1 A ARG 87 ? CZ ? A ARG 78 CZ 36 1 Y 1 A ARG 87 ? NH1 ? A ARG 78 NH1 37 1 Y 1 A ARG 87 ? NH2 ? A ARG 78 NH2 38 1 Y 1 A ASN 110 ? CG ? A ASN 101 CG 39 1 Y 1 A ASN 110 ? OD1 ? A ASN 101 OD1 40 1 Y 1 A ASN 110 ? ND2 ? A ASN 101 ND2 41 1 Y 1 A GLU 129 ? CG ? A GLU 120 CG 42 1 Y 1 A GLU 129 ? CD ? A GLU 120 CD 43 1 Y 1 A GLU 129 ? OE1 ? A GLU 120 OE1 44 1 Y 1 A GLU 129 ? OE2 ? A GLU 120 OE2 45 1 Y 1 A GLU 136 ? CG ? A GLU 127 CG 46 1 Y 1 A GLU 136 ? CD ? A GLU 127 CD 47 1 Y 1 A GLU 136 ? OE1 ? A GLU 127 OE1 48 1 Y 1 A GLU 136 ? OE2 ? A GLU 127 OE2 49 1 Y 1 A GLU 137 ? CG ? A GLU 128 CG 50 1 Y 1 A GLU 137 ? CD ? A GLU 128 CD 51 1 Y 1 A GLU 137 ? OE1 ? A GLU 128 OE1 52 1 Y 1 A GLU 137 ? OE2 ? A GLU 128 OE2 53 1 Y 1 A ARG 139 ? CG ? A ARG 130 CG 54 1 Y 1 A ARG 139 ? CD ? A ARG 130 CD 55 1 Y 1 A ARG 139 ? NE ? A ARG 130 NE 56 1 Y 1 A ARG 139 ? CZ ? A ARG 130 CZ 57 1 Y 1 A ARG 139 ? NH1 ? A ARG 130 NH1 58 1 Y 1 A ARG 139 ? NH2 ? A ARG 130 NH2 59 1 Y 1 A THR 140 ? OG1 ? A THR 131 OG1 60 1 Y 1 A THR 140 ? CG2 ? A THR 131 CG2 61 1 Y 1 A GLU 185 ? CG ? A GLU 176 CG 62 1 Y 1 A GLU 185 ? CD ? A GLU 176 CD 63 1 Y 1 A GLU 185 ? OE1 ? A GLU 176 OE1 64 1 Y 1 A GLU 185 ? OE2 ? A GLU 176 OE2 65 1 Y 1 A LYS 191 ? CG ? A LYS 182 CG 66 1 Y 1 A LYS 191 ? CD ? A LYS 182 CD 67 1 Y 1 A LYS 191 ? CE ? A LYS 182 CE 68 1 Y 1 A LYS 191 ? NZ ? A LYS 182 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 SHELXS phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 4M6T _cell.length_a 115.168 _cell.length_b 115.168 _cell.length_c 157.437 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4M6T _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4M6T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.72 _exptl_crystal.density_percent_sol 73.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '3.5M sodium formate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2012-12-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 4M6T _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.498 _reflns.number_obs 14136 _reflns.number_all 14138 _reflns.percent_possible_obs 99.75 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 43.600 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4M6T _refine.ls_number_reflns_obs 14136 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.788 _refine.ls_d_res_high 2.498 _refine.ls_percent_reflns_obs 99.75 _refine.ls_R_factor_obs 0.2341 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2324 _refine.ls_R_factor_R_free 0.2675 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.04 _refine.ls_number_reflns_R_free 712 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.B_iso_mean 45.8081 _refine.aniso_B[1][1] 7.3181 _refine.aniso_B[2][2] 7.3181 _refine.aniso_B[3][3] -14.6363 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.353 _refine.solvent_model_param_bsol 30.536 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.80 _refine.overall_FOM_work_R_set 0.7713 _refine.B_iso_max 85.560 _refine.B_iso_min 27.550 _refine.pdbx_overall_phase_error 29.0400 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1373 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 1404 _refine_hist.d_res_high 2.498 _refine_hist.d_res_low 38.788 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1434 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1944 1.182 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 210 0.084 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 252 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 517 19.909 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.4978 2.6906 5 99.0000 2592 . 0.3371 0.3766 . 158 . 2750 . 'X-RAY DIFFRACTION' . 2.6906 2.9613 5 100.0000 2668 . 0.2884 0.3006 . 140 . 2808 . 'X-RAY DIFFRACTION' . 2.9613 3.3896 5 100.0000 2666 . 0.2440 0.2791 . 154 . 2820 . 'X-RAY DIFFRACTION' . 3.3896 4.2697 5 100.0000 2702 . 0.1929 0.2356 . 126 . 2828 . 'X-RAY DIFFRACTION' . 4.2697 38.7924 5 100.0000 2796 . 0.2191 0.2461 . 134 . 2930 . 'X-RAY DIFFRACTION' . # _database_PDB_matrix.entry_id 4M6T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4M6T _struct.title 'Structure of human Paf1 and Leo1 complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4M6T _struct_keywords.pdbx_keywords 'Transcription Regulator' _struct_keywords.text 'Paf1-Leo1 subcomplex, transcription elongator, Transcription Regulator' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PAF1_HUMAN Q8N7H5 1 ;KDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGM M ; 170 ? 2 PDB 4M6T 4M6T 1 SGENLYFQS 91 ? 3 UNP LEO1_HUMAN Q8WVC0 1 ;GNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEGNEIKESNARIVKWSDGSMS LHLGNEVFDVYKA ; 370 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4M6T A 1 ? 81 ? Q8N7H5 170 ? 250 ? 10 90 2 2 4M6T A 82 ? 90 ? 4M6T 91 ? 99 ? 91 99 3 3 4M6T A 91 ? 183 ? Q8WVC0 370 ? 462 ? 100 192 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA hexameric 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 23940 ? 2 MORE -161 ? 2 'SSA (A^2)' 46220 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1,2,3,4,5,6 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 2 ? LYS A 19 ? ASP A 11 LYS A 28 1 ? 18 HELX_P HELX_P2 2 MET A 76 ? MET A 81 ? MET A 85 MET A 90 1 ? 6 HELX_P HELX_P3 3 ASP A 111 ? TYR A 115 ? ASP A 120 TYR A 124 5 ? 5 HELX_P HELX_P4 4 GLY A 129 ? GLU A 138 ? GLY A 138 GLU A 147 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PRO A 32 ? PRO A 37 ? PRO A 41 PRO A 46 A 2 ALA A 159 ? TRP A 164 ? ALA A 168 TRP A 173 A 3 MET A 169 ? LEU A 173 ? MET A 178 LEU A 182 A 4 GLU A 176 ? VAL A 180 ? GLU A 185 VAL A 189 B 1 LYS A 43 ? ILE A 46 ? LYS A 52 ILE A 55 B 2 LEU A 69 ? MET A 72 ? LEU A 78 MET A 81 C 1 ASN A 85 ? SER A 90 ? ASN A 94 SER A 99 C 2 ASP A 93 ? LYS A 98 ? ASP A 102 LYS A 107 D 1 SER A 104 ? VAL A 105 ? SER A 113 VAL A 114 D 2 THR A 140 ? ILE A 141 ? THR A 149 ILE A 150 E 1 TRP A 143 ? ARG A 147 ? TRP A 152 ARG A 156 E 2 GLU A 153 ? SER A 157 ? GLU A 162 SER A 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 36 ? N MET A 45 O ILE A 161 ? O ILE A 170 A 2 3 N ARG A 160 ? N ARG A 169 O HIS A 172 ? O HIS A 181 A 3 4 N LEU A 171 ? N LEU A 180 O PHE A 178 ? O PHE A 187 B 1 2 N ILE A 46 ? N ILE A 55 O LEU A 69 ? O LEU A 78 C 1 2 N LEU A 86 ? N LEU A 95 O VAL A 97 ? O VAL A 106 D 1 2 N SER A 104 ? N SER A 113 O ILE A 141 ? O ILE A 150 E 1 2 N ARG A 146 ? N ARG A 155 O ILE A 154 ? O ILE A 163 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SAM _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE SAM A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ALA A 17 ? ALA A 26 . ? 1_555 ? 2 AC1 13 GLN A 18 ? GLN A 27 . ? 1_555 ? 3 AC1 13 LYS A 19 ? LYS A 28 . ? 1_555 ? 4 AC1 13 SER A 20 ? SER A 29 . ? 1_555 ? 5 AC1 13 ILE A 21 ? ILE A 30 . ? 1_555 ? 6 AC1 13 PRO A 32 ? PRO A 41 . ? 1_555 ? 7 AC1 13 VAL A 33 ? VAL A 42 . ? 1_555 ? 8 AC1 13 GLU A 34 ? GLU A 43 . ? 1_555 ? 9 AC1 13 VAL A 35 ? VAL A 44 . ? 1_555 ? 10 AC1 13 GLU A 149 ? GLU A 158 . ? 5_555 ? 11 AC1 13 GLU A 150 ? GLU A 159 . ? 5_555 ? 12 AC1 13 GLY A 151 ? GLY A 160 . ? 5_555 ? 13 AC1 13 ARG A 160 ? ARG A 169 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 22 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASN _pdbx_validate_close_contact.auth_seq_id_2 167 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 31 ? ? -131.15 -34.70 2 1 ASN A 94 ? ? -179.64 146.37 3 1 ASP A 157 ? ? -40.10 165.74 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 93 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 94 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -147.27 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 130 ? A ASP 121 2 1 Y 1 A GLU 131 ? A GLU 122 3 1 Y 1 A GLU 132 ? A GLU 123 4 1 Y 1 A MET 133 ? A MET 124 5 1 Y 1 A LEU 134 ? A LEU 125 6 1 Y 1 A ASP 135 ? A ASP 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SAM N N N N 290 SAM CA C N S 291 SAM C C N N 292 SAM O O N N 293 SAM OXT O N N 294 SAM CB C N N 295 SAM CG C N N 296 SAM SD S N S 297 SAM CE C N N 298 SAM "C5'" C N N 299 SAM "C4'" C N S 300 SAM "O4'" O N N 301 SAM "C3'" C N S 302 SAM "O3'" O N N 303 SAM "C2'" C N R 304 SAM "O2'" O N N 305 SAM "C1'" C N R 306 SAM N9 N Y N 307 SAM C8 C Y N 308 SAM N7 N Y N 309 SAM C5 C Y N 310 SAM C6 C Y N 311 SAM N6 N N N 312 SAM N1 N Y N 313 SAM C2 C Y N 314 SAM N3 N Y N 315 SAM C4 C Y N 316 SAM HN1 H N N 317 SAM HN2 H N N 318 SAM HA H N N 319 SAM HB1 H N N 320 SAM HB2 H N N 321 SAM HG1 H N N 322 SAM HG2 H N N 323 SAM HE1 H N N 324 SAM HE2 H N N 325 SAM HE3 H N N 326 SAM "H5'1" H N N 327 SAM "H5'2" H N N 328 SAM "H4'" H N N 329 SAM "H3'" H N N 330 SAM "HO3'" H N N 331 SAM "H2'" H N N 332 SAM "HO2'" H N N 333 SAM "H1'" H N N 334 SAM H8 H N N 335 SAM HN61 H N N 336 SAM HN62 H N N 337 SAM H2 H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SAM N CA sing N N 277 SAM N HN1 sing N N 278 SAM N HN2 sing N N 279 SAM CA C sing N N 280 SAM CA CB sing N N 281 SAM CA HA sing N N 282 SAM C O doub N N 283 SAM C OXT sing N N 284 SAM CB CG sing N N 285 SAM CB HB1 sing N N 286 SAM CB HB2 sing N N 287 SAM CG SD sing N N 288 SAM CG HG1 sing N N 289 SAM CG HG2 sing N N 290 SAM SD CE sing N N 291 SAM SD "C5'" sing N N 292 SAM CE HE1 sing N N 293 SAM CE HE2 sing N N 294 SAM CE HE3 sing N N 295 SAM "C5'" "C4'" sing N N 296 SAM "C5'" "H5'1" sing N N 297 SAM "C5'" "H5'2" sing N N 298 SAM "C4'" "O4'" sing N N 299 SAM "C4'" "C3'" sing N N 300 SAM "C4'" "H4'" sing N N 301 SAM "O4'" "C1'" sing N N 302 SAM "C3'" "O3'" sing N N 303 SAM "C3'" "C2'" sing N N 304 SAM "C3'" "H3'" sing N N 305 SAM "O3'" "HO3'" sing N N 306 SAM "C2'" "O2'" sing N N 307 SAM "C2'" "C1'" sing N N 308 SAM "C2'" "H2'" sing N N 309 SAM "O2'" "HO2'" sing N N 310 SAM "C1'" N9 sing N N 311 SAM "C1'" "H1'" sing N N 312 SAM N9 C8 sing Y N 313 SAM N9 C4 sing Y N 314 SAM C8 N7 doub Y N 315 SAM C8 H8 sing N N 316 SAM N7 C5 sing Y N 317 SAM C5 C6 sing Y N 318 SAM C5 C4 doub Y N 319 SAM C6 N6 sing N N 320 SAM C6 N1 doub Y N 321 SAM N6 HN61 sing N N 322 SAM N6 HN62 sing N N 323 SAM N1 C2 sing Y N 324 SAM C2 N3 doub Y N 325 SAM C2 H2 sing N N 326 SAM N3 C4 sing Y N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # _atom_sites.entry_id 4M6T _atom_sites.fract_transf_matrix[1][1] 0.008683 _atom_sites.fract_transf_matrix[1][2] 0.005013 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010026 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006352 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_