HEADER IMMUNE SYSTEM 12-AUG-13 4M7K TITLE CRYSTAL STRUCTURE OF ANTI-TISSUE FACTOR ANTIBODY 10H10 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 10H10 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: SEE REMARK 999; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 10H10 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: FD, SEE REMARK 999; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: MOUSE, HUMAN; SOURCE 4 ORGANISM_TAXID: 10090, 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK 293; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS, HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: MOUSE, HUMAN; SOURCE 12 ORGANISM_TAXID: 10090, 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK 293 KEYWDS ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.TEPLYAKOV,G.OBMOLOVA,T.MALIA,G.L.GILLILAND REVDAT 5 20-SEP-23 4M7K 1 REMARK LINK REVDAT 4 25-DEC-19 4M7K 1 SEQRES LINK REVDAT 3 06-AUG-14 4M7K 1 JRNL REVDAT 2 02-APR-14 4M7K 1 JRNL REVDAT 1 26-MAR-14 4M7K 0 JRNL AUTH A.TEPLYAKOV,J.LUO,G.OBMOLOVA,T.J.MALIA,R.SWEET, JRNL AUTH 2 R.L.STANFIELD,S.KODANGATTIL,J.C.ALMAGRO,G.L.GILLILAND JRNL TITL ANTIBODY MODELING ASSESSMENT II. STRUCTURES AND MODELS. JRNL REF PROTEINS V. 82 1563 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 24633955 JRNL DOI 10.1002/PROT.24554 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 37585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 997 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2605 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 347 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : -0.77000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.317 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3496 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4764 ; 1.059 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 447 ; 5.973 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;37.257 ;24.887 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;12.134 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;12.781 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 534 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2635 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2238 ; 2.577 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3616 ; 4.263 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1258 ;21.428 ;88.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1148 ;23.101 ;88.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M7K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38664 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRIES 1VGE, 1MVU, AND 1D5I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CACODYLATE, PH 6.5, 24% PEG8000, REMARK 280 1 M SODIUM ACETATE, 5% PEG400, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.12500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.12500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.88500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.75500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.88500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.75500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.12500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.88500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.75500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.12500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.88500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.75500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS H 225 CG ND1 CD2 CE1 NE2 REMARK 470 HIS H 227 CG ND1 CD2 CE1 NE2 REMARK 470 HIS H 229 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 34 6.88 -159.68 REMARK 500 ALA L 57 -36.51 68.47 REMARK 500 TYR L 98 -61.44 -104.40 REMARK 500 ASN L 144 62.90 61.93 REMARK 500 LYS L 196 -64.70 -103.26 REMARK 500 ALA H 92 168.27 179.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA H 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU H 10 OE2 REMARK 620 2 LYS H 19 O 91.1 REMARK 620 3 HOH H 413 O 79.5 89.0 REMARK 620 4 HOH H 459 O 173.8 93.5 96.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT H 302 REMARK 999 REMARK 999 SEQUENCE REMARK 999 HEAVY AND LIGHT CHAINS ARE CHIMERIC MOLECULES EACH COMPRISING A REMARK 999 MOUSE VARIABLE DOMAIN AND HUMAN CONSTANT DOMAIN. DBREF 4M7K L 1 220 PDB 4M7K 4M7K 1 220 DBREF 4M7K H 1 229 PDB 4M7K 4M7K 1 229 SEQRES 1 L 220 ASP ILE VAL MET THR GLN SER PRO SER SER LEU THR VAL SEQRES 2 L 220 THR ALA GLY GLU LYS VAL THR MET SER CYS LYS SER SER SEQRES 3 L 220 GLN SER LEU LEU SER SER GLY ASN GLN LYS ASN TYR LEU SEQRES 4 L 220 THR TRP TYR GLN GLN ILE PRO GLY GLN PRO PRO LYS LEU SEQRES 5 L 220 LEU ILE TYR TRP ALA SER THR ARG GLU SER GLY VAL PRO SEQRES 6 L 220 ASP ARG PHE THR GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 L 220 LEU THR ILE ASN SER VAL GLN ALA GLU ASP LEU ALA VAL SEQRES 8 L 220 TYR TYR CYS GLN ASN ASP TYR THR TYR PRO LEU THR PHE SEQRES 9 L 220 GLY ALA GLY THR LYS LEU GLU LEU LYS ARG THR VAL ALA SEQRES 10 L 220 ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN SEQRES 11 L 220 LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL SEQRES 13 L 220 ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL SEQRES 14 L 220 THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 L 220 SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS SEQRES 16 L 220 LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SEQRES 17 L 220 SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 229 PCA VAL HIS LEU GLN GLN SER GLY ALA GLU LEU MET LYS SEQRES 2 H 229 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 229 TYR THR PHE ILE THR TYR TRP ILE GLU TRP VAL LYS GLN SEQRES 4 H 229 ARG PRO GLY HIS GLY LEU GLU TRP ILE GLY ASP ILE LEU SEQRES 5 H 229 PRO GLY SER GLY SER THR ASN TYR ASN GLU ASN PHE LYS SEQRES 6 H 229 GLY LYS ALA THR PHE THR ALA ASP SER SER SER ASN THR SEQRES 7 H 229 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 229 ALA VAL TYR TYR CYS ALA ARG SER GLY TYR TYR GLY ASN SEQRES 9 H 229 SER GLY PHE ALA TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 H 229 VAL SER ALA ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 H 229 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 H 229 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 H 229 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 H 229 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 H 229 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 H 229 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 H 229 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 H 229 SER CYS HIS HIS HIS HIS HIS HIS MODRES 4M7K PCA H 1 GLN PYROGLUTAMIC ACID HET PCA H 1 8 HET CA H 301 1 HET ACT H 302 4 HETNAM PCA PYROGLUTAMIC ACID HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION FORMUL 2 PCA C5 H7 N O3 FORMUL 3 CA CA 2+ FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 HOH *347(H2 O) HELIX 1 1 GLN L 85 LEU L 89 5 5 HELIX 2 2 SER L 127 SER L 133 1 7 HELIX 3 3 LYS L 189 GLU L 193 1 5 HELIX 4 4 THR H 28 TYR H 32 5 5 HELIX 5 5 GLU H 62 LYS H 65 5 4 HELIX 6 6 THR H 87 SER H 91 5 5 HELIX 7 7 SER H 134 LYS H 136 5 3 HELIX 8 8 SER H 163 ALA H 165 5 3 HELIX 9 9 SER H 194 GLY H 197 5 4 HELIX 10 10 LYS H 208 ASN H 211 5 4 SHEET 1 A 4 MET L 4 SER L 7 0 SHEET 2 A 4 VAL L 19 SER L 25 -1 O SER L 22 N SER L 7 SHEET 3 A 4 ASP L 76 ILE L 81 -1 O PHE L 77 N CYS L 23 SHEET 4 A 4 PHE L 68 SER L 73 -1 N THR L 69 O THR L 80 SHEET 1 B 6 SER L 10 THR L 14 0 SHEET 2 B 6 THR L 108 LYS L 113 1 O LYS L 113 N VAL L 13 SHEET 3 B 6 ALA L 90 ASN L 96 -1 N ALA L 90 O LEU L 110 SHEET 4 B 6 LEU L 39 GLN L 44 -1 N TYR L 42 O TYR L 93 SHEET 5 B 6 LYS L 51 TYR L 55 -1 O ILE L 54 N TRP L 41 SHEET 6 B 6 THR L 59 ARG L 60 -1 O THR L 59 N TYR L 55 SHEET 1 C 4 SER L 10 THR L 14 0 SHEET 2 C 4 THR L 108 LYS L 113 1 O LYS L 113 N VAL L 13 SHEET 3 C 4 ALA L 90 ASN L 96 -1 N ALA L 90 O LEU L 110 SHEET 4 C 4 THR L 103 PHE L 104 -1 O THR L 103 N ASN L 96 SHEET 1 D 4 SER L 120 PHE L 124 0 SHEET 2 D 4 THR L 135 PHE L 145 -1 O ASN L 143 N SER L 120 SHEET 3 D 4 TYR L 179 SER L 188 -1 O SER L 183 N CYS L 140 SHEET 4 D 4 SER L 165 VAL L 169 -1 N GLN L 166 O THR L 184 SHEET 1 E 4 ALA L 159 LEU L 160 0 SHEET 2 E 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 E 4 VAL L 197 THR L 203 -1 O GLU L 201 N GLN L 153 SHEET 4 E 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SHEET 1 F 4 HIS H 3 GLN H 6 0 SHEET 2 F 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 F 4 THR H 78 LEU H 83 -1 O MET H 81 N ILE H 20 SHEET 4 F 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 G 6 GLU H 10 MET H 12 0 SHEET 2 G 6 THR H 114 VAL H 118 1 O THR H 117 N GLU H 10 SHEET 3 G 6 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 G 6 ILE H 34 GLN H 39 -1 N GLU H 35 O ALA H 97 SHEET 5 G 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 G 6 THR H 58 TYR H 60 -1 O ASN H 59 N ASP H 50 SHEET 1 H 4 GLU H 10 MET H 12 0 SHEET 2 H 4 THR H 114 VAL H 118 1 O THR H 117 N GLU H 10 SHEET 3 H 4 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 H 4 PHE H 107 TRP H 110 -1 O TYR H 109 N ARG H 98 SHEET 1 I 4 SER H 127 LEU H 131 0 SHEET 2 I 4 THR H 142 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 I 4 TYR H 183 PRO H 192 -1 O VAL H 191 N ALA H 143 SHEET 4 I 4 VAL H 170 THR H 172 -1 N HIS H 171 O VAL H 188 SHEET 1 J 4 THR H 138 SER H 139 0 SHEET 2 J 4 THR H 142 TYR H 152 -1 O THR H 142 N SER H 139 SHEET 3 J 4 TYR H 183 PRO H 192 -1 O VAL H 191 N ALA H 143 SHEET 4 J 4 VAL H 176 LEU H 177 -1 N VAL H 176 O SER H 184 SHEET 1 K 3 THR H 158 TRP H 161 0 SHEET 2 K 3 ILE H 202 HIS H 207 -1 O ASN H 204 N SER H 160 SHEET 3 K 3 THR H 212 LYS H 217 -1 O VAL H 214 N VAL H 205 SSBOND 1 CYS L 23 CYS L 94 1555 1555 2.05 SSBOND 2 CYS L 140 CYS L 200 1555 1555 2.03 SSBOND 3 CYS L 220 CYS H 223 1555 1555 2.04 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 5 CYS H 147 CYS H 203 1555 1555 2.03 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK OE2 GLU H 10 CA CA H 301 1555 1555 2.34 LINK O LYS H 19 CA CA H 301 1555 1555 2.39 LINK CA CA H 301 O HOH H 413 1555 1555 2.49 LINK CA CA H 301 O HOH H 459 1555 1555 2.45 CISPEP 1 SER L 7 PRO L 8 0 -4.16 CISPEP 2 TYR L 100 PRO L 101 0 -5.16 CISPEP 3 TYR L 146 PRO L 147 0 1.87 CISPEP 4 PHE H 153 PRO H 154 0 -5.55 CISPEP 5 GLU H 155 PRO H 156 0 0.91 SITE 1 AC1 4 GLU H 10 LYS H 19 HOH H 413 HOH H 459 SITE 1 AC2 4 VAL H 2 ARG H 98 TYR H 101 HOH H 504 CRYST1 81.770 135.510 88.250 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012229 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007380 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011331 0.00000