HEADER OXIDOREDUCTASE/ANTIBIOTIC 13-AUG-13 4M89 TITLE CRYSTAL STRUCTURE OF ENOYL-ACYL CARRIER PROTEIN REDUCTASE (FABI) FROM TITLE 2 NEISSERIA MENINGITIDIS IN COMPLEX WITH NAD+ AND TRICLOSAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 272831; SOURCE 4 STRAIN: FAM18; SOURCE 5 GENE: FABI, NMC1834; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOYL, ACYL CARRIER PROTEIN, ACP, NEISSERIA, INHIBITOR, ROSSMANN KEYWDS 2 FOLD, REDUCTASE, NAD, TRICLOSAN, OXIDOREDUCTASE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.D.NANSON,J.K.FORWOOD REVDAT 2 28-FEB-24 4M89 1 REMARK REVDAT 1 02-OCT-13 4M89 0 JRNL AUTH J.D.NANSON,J.K.FORWOOD JRNL TITL CRYSTAL STRUCTURE OF ENOYL-ACYL CARRIER PROTEIN REDUCTASE JRNL TITL 2 (FABI) FROM NEISSERIA MENINGITIDIS IN COMPLEX WITH NAD+ AND JRNL TITL 3 TRICLOSAN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44797 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2383 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3203 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 195 REMARK 3 BIN FREE R VALUE : 0.2000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3828 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 122 REMARK 3 SOLVENT ATOMS : 314 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4060 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3882 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5500 ; 1.498 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8906 ; 1.008 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 520 ; 5.683 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;30.283 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 666 ;12.871 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;16.560 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 618 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4610 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 934 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2068 ; 0.641 ; 1.174 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2067 ; 0.639 ; 1.173 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2586 ; 1.133 ; 1.758 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2587 ; 1.133 ; 1.759 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1990 ; 0.895 ; 1.349 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1989 ; 0.894 ; 1.349 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2913 ; 1.570 ; 1.957 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4892 ; 3.378 ;10.152 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4766 ; 3.213 ; 9.914 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 258 B 2 258 15286 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2861 -31.5227 -1.4763 REMARK 3 T TENSOR REMARK 3 T11: 0.0323 T22: 0.0408 REMARK 3 T33: 0.0364 T12: -0.0285 REMARK 3 T13: -0.0119 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.1187 L22: 0.1619 REMARK 3 L33: 0.3520 L12: -0.0945 REMARK 3 L13: -0.0036 L23: -0.1354 REMARK 3 S TENSOR REMARK 3 S11: -0.0360 S12: 0.0441 S13: 0.0177 REMARK 3 S21: 0.0018 S22: -0.0448 S23: -0.0256 REMARK 3 S31: 0.0238 S32: 0.0183 S33: 0.0808 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 258 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6333 -56.4855 16.6043 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.0222 REMARK 3 T33: 0.0439 T12: 0.0128 REMARK 3 T13: 0.0321 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 0.2461 L22: 0.0327 REMARK 3 L33: 0.3295 L12: -0.0357 REMARK 3 L13: 0.0116 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: -0.0331 S13: -0.0126 REMARK 3 S21: -0.0198 S22: -0.0053 S23: 0.0004 REMARK 3 S31: 0.1021 S32: 0.0143 S33: 0.0521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4M89 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : SILICON DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47336 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 34.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 296.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.42333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.84667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 120.63500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 201.05833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.21167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.42333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 160.84667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 201.05833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 120.63500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.21167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 45.38500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -78.60913 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 40.21167 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 512 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 259 REMARK 465 GLU A 260 REMARK 465 GLY A 261 REMARK 465 MET B 1 REMARK 465 THR B 259 REMARK 465 GLU B 260 REMARK 465 GLY B 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 156 -23.64 77.06 REMARK 500 ASN A 158 -125.80 53.41 REMARK 500 VAL A 248 70.81 -118.09 REMARK 500 ASN B 156 -22.42 76.43 REMARK 500 ASN B 158 -126.70 53.18 REMARK 500 VAL B 248 71.81 -117.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TCL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TCL B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M86 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN UNBOUND FORM REMARK 900 RELATED ID: 4M87 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH NAD+ DBREF 4M89 A 1 261 UNP A1KVU8 A1KVU8_NEIMF 1 261 DBREF 4M89 B 1 261 UNP A1KVU8 A1KVU8_NEIMF 1 261 SEQRES 1 A 261 MET GLY PHE LEU GLN GLY LYS LYS ILE LEU ILE THR GLY SEQRES 2 A 261 MET ILE SER GLU ARG SER ILE ALA TYR GLY ILE ALA LYS SEQRES 3 A 261 ALA CYS ARG GLU GLN GLY ALA GLU LEU ALA PHE THR TYR SEQRES 4 A 261 VAL VAL ASP LYS LEU GLU GLU ARG VAL ARG LYS MET ALA SEQRES 5 A 261 ALA GLU LEU ASP SER GLU LEU VAL PHE ARG CYS ASP VAL SEQRES 6 A 261 ALA SER ASP ASP GLU ILE ASN GLN VAL PHE ALA ASP LEU SEQRES 7 A 261 GLY LYS HIS TRP ASP GLY LEU ASP GLY LEU VAL HIS SER SEQRES 8 A 261 ILE GLY PHE ALA PRO LYS GLU ALA LEU SER GLY ASP PHE SEQRES 9 A 261 LEU ASP SER ILE SER ARG GLU ALA PHE ASN THR ALA HIS SEQRES 10 A 261 GLU ILE SER ALA TYR SER LEU PRO ALA LEU ALA LYS ALA SEQRES 11 A 261 ALA ARG PRO MET MET ARG GLY ARG ASN SER ALA ILE VAL SEQRES 12 A 261 ALA LEU SER TYR LEU GLY ALA VAL ARG ALA ILE PRO ASN SEQRES 13 A 261 TYR ASN VAL MET GLY MET ALA LYS ALA SER LEU GLU ALA SEQRES 14 A 261 GLY ILE ARG PHE THR ALA ALA CYS LEU GLY LYS GLU GLY SEQRES 15 A 261 ILE ARG CYS ASN GLY ILE SER ALA GLY PRO ILE LYS THR SEQRES 16 A 261 LEU ALA ALA SER GLY ILE ALA ASP PHE GLY LYS LEU LEU SEQRES 17 A 261 GLY HIS VAL ALA ALA HIS ASN PRO LEU ARG ARG ASN VAL SEQRES 18 A 261 THR ILE GLU GLU VAL GLY ASN THR ALA ALA PHE LEU LEU SEQRES 19 A 261 SER ASP LEU SER SER GLY ILE THR GLY GLU ILE THR TYR SEQRES 20 A 261 VAL ASP GLY GLY TYR SER ILE ASN ALA LEU SER THR GLU SEQRES 21 A 261 GLY SEQRES 1 B 261 MET GLY PHE LEU GLN GLY LYS LYS ILE LEU ILE THR GLY SEQRES 2 B 261 MET ILE SER GLU ARG SER ILE ALA TYR GLY ILE ALA LYS SEQRES 3 B 261 ALA CYS ARG GLU GLN GLY ALA GLU LEU ALA PHE THR TYR SEQRES 4 B 261 VAL VAL ASP LYS LEU GLU GLU ARG VAL ARG LYS MET ALA SEQRES 5 B 261 ALA GLU LEU ASP SER GLU LEU VAL PHE ARG CYS ASP VAL SEQRES 6 B 261 ALA SER ASP ASP GLU ILE ASN GLN VAL PHE ALA ASP LEU SEQRES 7 B 261 GLY LYS HIS TRP ASP GLY LEU ASP GLY LEU VAL HIS SER SEQRES 8 B 261 ILE GLY PHE ALA PRO LYS GLU ALA LEU SER GLY ASP PHE SEQRES 9 B 261 LEU ASP SER ILE SER ARG GLU ALA PHE ASN THR ALA HIS SEQRES 10 B 261 GLU ILE SER ALA TYR SER LEU PRO ALA LEU ALA LYS ALA SEQRES 11 B 261 ALA ARG PRO MET MET ARG GLY ARG ASN SER ALA ILE VAL SEQRES 12 B 261 ALA LEU SER TYR LEU GLY ALA VAL ARG ALA ILE PRO ASN SEQRES 13 B 261 TYR ASN VAL MET GLY MET ALA LYS ALA SER LEU GLU ALA SEQRES 14 B 261 GLY ILE ARG PHE THR ALA ALA CYS LEU GLY LYS GLU GLY SEQRES 15 B 261 ILE ARG CYS ASN GLY ILE SER ALA GLY PRO ILE LYS THR SEQRES 16 B 261 LEU ALA ALA SER GLY ILE ALA ASP PHE GLY LYS LEU LEU SEQRES 17 B 261 GLY HIS VAL ALA ALA HIS ASN PRO LEU ARG ARG ASN VAL SEQRES 18 B 261 THR ILE GLU GLU VAL GLY ASN THR ALA ALA PHE LEU LEU SEQRES 19 B 261 SER ASP LEU SER SER GLY ILE THR GLY GLU ILE THR TYR SEQRES 20 B 261 VAL ASP GLY GLY TYR SER ILE ASN ALA LEU SER THR GLU SEQRES 21 B 261 GLY HET NAD A 301 44 HET TCL A 302 17 HET NAD B 301 44 HET TCL B 302 17 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM TCL TRICLOSAN FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 TCL 2(C12 H7 CL3 O2) FORMUL 7 HOH *314(H2 O) HELIX 1 1 SER A 19 GLN A 31 1 13 HELIX 2 2 VAL A 41 LYS A 43 5 3 HELIX 3 3 LEU A 44 LEU A 55 1 12 HELIX 4 4 SER A 67 GLY A 79 1 13 HELIX 5 5 PRO A 96 SER A 101 5 6 HELIX 6 6 ASP A 103 ILE A 108 1 6 HELIX 7 7 SER A 109 ALA A 121 1 13 HELIX 8 8 TYR A 122 ARG A 136 1 15 HELIX 9 9 TYR A 147 VAL A 151 5 5 HELIX 10 10 ASN A 158 GLY A 179 1 22 HELIX 11 11 LEU A 196 ILE A 201 5 6 HELIX 12 12 ASP A 203 ASN A 215 1 13 HELIX 13 13 THR A 222 SER A 235 1 14 HELIX 14 14 ASP A 236 SER A 239 5 4 HELIX 15 15 GLY A 251 ASN A 255 5 5 HELIX 16 16 SER B 19 GLN B 31 1 13 HELIX 17 17 VAL B 41 LYS B 43 5 3 HELIX 18 18 LEU B 44 LEU B 55 1 12 HELIX 19 19 SER B 67 GLY B 79 1 13 HELIX 20 20 PRO B 96 SER B 101 5 6 HELIX 21 21 ASP B 103 ILE B 108 1 6 HELIX 22 22 SER B 109 ALA B 121 1 13 HELIX 23 23 TYR B 122 ARG B 136 1 15 HELIX 24 24 TYR B 147 VAL B 151 5 5 HELIX 25 25 ASN B 158 GLY B 179 1 22 HELIX 26 26 LEU B 196 ILE B 201 5 6 HELIX 27 27 ASP B 203 ASN B 215 1 13 HELIX 28 28 THR B 222 SER B 235 1 14 HELIX 29 29 ASP B 236 SER B 239 5 4 HELIX 30 30 GLY B 251 ASN B 255 5 5 SHEET 1 A 7 VAL A 60 ARG A 62 0 SHEET 2 A 7 GLU A 34 TYR A 39 1 N PHE A 37 O PHE A 61 SHEET 3 A 7 LYS A 8 ILE A 11 1 N ILE A 11 O ALA A 36 SHEET 4 A 7 GLY A 87 HIS A 90 1 O GLY A 87 N LEU A 10 SHEET 5 A 7 SER A 140 SER A 146 1 O VAL A 143 N HIS A 90 SHEET 6 A 7 ILE A 183 ALA A 190 1 O ILE A 188 N SER A 146 SHEET 7 A 7 ILE A 245 VAL A 248 1 O THR A 246 N GLY A 187 SHEET 1 B 7 VAL B 60 ARG B 62 0 SHEET 2 B 7 GLU B 34 TYR B 39 1 N PHE B 37 O PHE B 61 SHEET 3 B 7 LYS B 8 ILE B 11 1 N ILE B 11 O ALA B 36 SHEET 4 B 7 GLY B 87 HIS B 90 1 O VAL B 89 N LEU B 10 SHEET 5 B 7 SER B 140 SER B 146 1 O VAL B 143 N HIS B 90 SHEET 6 B 7 ILE B 183 ALA B 190 1 O ILE B 188 N SER B 146 SHEET 7 B 7 ILE B 245 VAL B 248 1 O THR B 246 N GLY B 187 SITE 1 AC1 30 GLY A 13 ILE A 15 SER A 19 ILE A 20 SITE 2 AC1 30 VAL A 40 CYS A 63 ASP A 64 VAL A 65 SITE 3 AC1 30 SER A 91 ILE A 92 GLY A 93 ILE A 119 SITE 4 AC1 30 LEU A 145 SER A 146 LYS A 164 ALA A 190 SITE 5 AC1 30 GLY A 191 PRO A 192 ILE A 193 THR A 195 SITE 6 AC1 30 LEU A 196 ALA A 197 TCL A 302 HOH A 401 SITE 7 AC1 30 HOH A 402 HOH A 412 HOH A 423 HOH A 433 SITE 8 AC1 30 HOH A 449 HOH A 451 SITE 1 AC2 9 GLY A 93 ALA A 95 LEU A 100 TYR A 147 SITE 2 AC2 9 TYR A 157 LYS A 164 ALA A 197 ILE A 201 SITE 3 AC2 9 NAD A 301 SITE 1 AC3 31 GLY B 13 ILE B 15 SER B 19 ILE B 20 SITE 2 AC3 31 VAL B 40 CYS B 63 ASP B 64 VAL B 65 SITE 3 AC3 31 SER B 91 ILE B 92 GLY B 93 ILE B 119 SITE 4 AC3 31 LEU B 145 SER B 146 TYR B 147 LYS B 164 SITE 5 AC3 31 ALA B 190 GLY B 191 PRO B 192 ILE B 193 SITE 6 AC3 31 THR B 195 LEU B 196 ALA B 197 TCL B 302 SITE 7 AC3 31 HOH B 410 HOH B 414 HOH B 431 HOH B 448 SITE 8 AC3 31 HOH B 472 HOH B 488 HOH B 538 SITE 1 AC4 10 GLY B 93 ALA B 95 LEU B 100 TYR B 147 SITE 2 AC4 10 TYR B 157 LYS B 164 ALA B 197 ALA B 198 SITE 3 AC4 10 ILE B 201 NAD B 301 CRYST1 90.770 90.770 241.270 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011017 0.006361 0.000000 0.00000 SCALE2 0.000000 0.012721 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004145 0.00000