HEADER OXIDOREDUCTASE 15-AUG-13 4MA9 TITLE WILD TYPE SALMONELLA ALKYL HYDROPEROXIDE REDUCTASE C IN ITS SUBSTRATE- TITLE 2 READY CONFORMATION CAVEAT 4MA9 ENTRY CONTAINS UNREALISTIC BOND DISTANCES INVOLVING HYDROGEN CAVEAT 2 4MA9 ATOMS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT C; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: AHPC, ALKYL HYDROPEROXIDE REDUCTASE PROTEIN C22, COMPND 5 PEROXIREDOXIN, THIOREDOXIN PEROXIDASE; COMPND 6 EC: 1.11.1.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 GENE: AHPC, AHPC STM0608, STM0608; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS THIOREDOXIN FOLD, PEROXIDASE, PEROXIREDOXIN, PRX1 AHPC, 2-CYS PRX, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PERKINS,P.A.KARPLUS REVDAT 4 20-SEP-23 4MA9 1 REMARK LINK REVDAT 3 12-FEB-14 4MA9 1 JRNL REVDAT 2 27-NOV-13 4MA9 1 JRNL REVDAT 1 20-NOV-13 4MA9 0 JRNL AUTH A.PERKINS,K.J.NELSON,J.R.WILLIAMS,D.PARSONAGE,L.B.POOLE, JRNL AUTH 2 P.A.KARPLUS JRNL TITL THE SENSITIVE BALANCE BETWEEN THE FULLY FOLDED AND LOCALLY JRNL TITL 2 UNFOLDED CONFORMATIONS OF A MODEL PEROXIREDOXIN. JRNL REF BIOCHEMISTRY V. 52 8708 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 24175952 JRNL DOI 10.1021/BI4011573 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 125942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 6384 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.97 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 8304 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2153 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7906 REMARK 3 BIN R VALUE (WORKING SET) : 0.2151 REMARK 3 BIN FREE R VALUE : 0.2202 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.79 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 398 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7102 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 503 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.98400 REMARK 3 B22 (A**2) : -3.16580 REMARK 3 B33 (A**2) : 0.18170 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.278 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.099 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.099 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.119 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.101 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 14430 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 26084 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3145 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 200 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 2121 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 14430 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 7 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 988 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 16099 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.86 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.22 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { *|* } REMARK 3 ORIGIN FOR THE GROUP (A): 26.1954 22.8634 120.5130 REMARK 3 T TENSOR REMARK 3 T11: -0.0285 T22: -0.1139 REMARK 3 T33: -0.1543 T12: -0.0241 REMARK 3 T13: 0.0094 T23: -0.1003 REMARK 3 L TENSOR REMARK 3 L11: 0.6745 L22: 0.3876 REMARK 3 L33: 0.5090 L12: 0.0664 REMARK 3 L13: 0.1718 L23: -0.2612 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: 0.1325 S13: 0.0335 REMARK 3 S21: 0.0046 S22: 0.0477 S23: -0.0719 REMARK 3 S31: -0.0842 S32: 0.1045 S33: -0.0307 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATERS ARE ORDERED FROM STRONGEST REMARK 3 DENSITY TO WEAKEST DENSITY REMARK 4 REMARK 4 4MA9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081662. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97741 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED DUAL REMARK 200 CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 125942 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 36.758 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1N8J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M MAGNESIUM SULFATE, 0.1 M MES, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.66000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.66000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.42000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 85.57500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.42000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 85.57500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.66000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.42000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 85.57500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.66000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.42000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 85.57500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 65900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -326.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 270.64000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 202 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 164 REMARK 465 CYS A 165 REMARK 465 PRO A 166 REMARK 465 ALA A 167 REMARK 465 LYS A 168 REMARK 465 TRP A 169 REMARK 465 LYS A 170 REMARK 465 GLU A 171 REMARK 465 GLY A 172 REMARK 465 GLU A 173 REMARK 465 ALA A 174 REMARK 465 THR A 175 REMARK 465 LEU A 176 REMARK 465 ALA A 177 REMARK 465 PRO A 178 REMARK 465 SER A 179 REMARK 465 LEU A 180 REMARK 465 ASP A 181 REMARK 465 LEU A 182 REMARK 465 VAL A 183 REMARK 465 GLY A 184 REMARK 465 LYS A 185 REMARK 465 ILE A 186 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 GLU E 86 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H2 SER A 1 O HOH B 1231 1.46 REMARK 500 H1 SER A 1 O HOH B 1073 1.46 REMARK 500 H3 SER D 1 O HOH C 1101 1.47 REMARK 500 H3 SER C 1 O HOH D 1067 1.49 REMARK 500 H3 SER A 1 O HOH B 1009 1.50 REMARK 500 H1 SER B 1 O HOH A 1089 1.50 REMARK 500 H1 SER D 1 O HOH C 1030 1.52 REMARK 500 H1 SER C 1 O HOH D 1054 1.53 REMARK 500 O PRO B 47 H GLY B 51 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 43 -147.90 -123.34 REMARK 500 PHE B 42 18.93 53.39 REMARK 500 PHE B 42 38.92 70.90 REMARK 500 PRO B 166 -178.19 -69.25 REMARK 500 THR C 43 -152.90 -115.00 REMARK 500 THR D 43 -160.27 -111.78 REMARK 500 THR E 43 -146.26 -112.12 REMARK 500 ASP E 108 46.51 39.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 72 O REMARK 620 2 HOH A1064 O 93.9 REMARK 620 3 HOH A1087 O 74.9 81.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 72 O REMARK 620 2 HOH B1014 O 100.4 REMARK 620 3 HOH B1279 O 73.0 154.3 REMARK 620 4 THR C 72 O 158.1 97.4 95.9 REMARK 620 5 HOH C1047 O 92.4 72.1 83.3 105.2 REMARK 620 6 HOH C1234 O 93.6 84.8 119.9 75.3 156.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 72 O REMARK 620 2 HOH D1195 O 80.4 REMARK 620 3 HOH D1373 O 99.9 155.5 REMARK 620 4 THR E 72 O 163.3 93.8 91.8 REMARK 620 5 HOH E1106 O 93.9 80.7 74.8 100.6 REMARK 620 6 HOH E1261 O 99.1 129.1 75.3 72.3 149.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N8J RELATED DB: PDB REMARK 900 AHPC ACTIVE SITE CYS TO SER VARIANT REMARK 900 RELATED ID: 1YEP RELATED DB: PDB REMARK 900 DISULFIDE FORM OF WILD TYPE AHPC (IN THE LOCALLY UNFOLDED REMARK 900 CONFORMATION) REMARK 900 RELATED ID: 4MAB RELATED DB: PDB REMARK 900 C165A AHPC DBREF 4MA9 A 1 186 UNP P0A251 AHPC_SALTY 2 187 DBREF 4MA9 B 1 186 UNP P0A251 AHPC_SALTY 2 187 DBREF 4MA9 C 1 186 UNP P0A251 AHPC_SALTY 2 187 DBREF 4MA9 D 1 186 UNP P0A251 AHPC_SALTY 2 187 DBREF 4MA9 E 1 186 UNP P0A251 AHPC_SALTY 2 187 SEQRES 1 A 186 SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN GLN SEQRES 2 A 186 ALA PHE LYS ASN GLY GLU PHE ILE GLU VAL THR GLU LYS SEQRES 3 A 186 ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR PRO SEQRES 4 A 186 ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY ASP SEQRES 5 A 186 VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY VAL SEQRES 6 A 186 ASP VAL TYR SER VAL SER THR ASP THR HIS PHE THR HIS SEQRES 7 A 186 LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS ILE SEQRES 8 A 186 LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU THR SEQRES 9 A 186 ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU ALA SEQRES 10 A 186 ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE ILE SEQRES 11 A 186 GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG ASP SEQRES 12 A 186 ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN TYR SEQRES 13 A 186 VAL ALA ALA HIS PRO GLY GLU VAL CYS PRO ALA LYS TRP SEQRES 14 A 186 LYS GLU GLY GLU ALA THR LEU ALA PRO SER LEU ASP LEU SEQRES 15 A 186 VAL GLY LYS ILE SEQRES 1 B 186 SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN GLN SEQRES 2 B 186 ALA PHE LYS ASN GLY GLU PHE ILE GLU VAL THR GLU LYS SEQRES 3 B 186 ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR PRO SEQRES 4 B 186 ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY ASP SEQRES 5 B 186 VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY VAL SEQRES 6 B 186 ASP VAL TYR SER VAL SER THR ASP THR HIS PHE THR HIS SEQRES 7 B 186 LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS ILE SEQRES 8 B 186 LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU THR SEQRES 9 B 186 ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU ALA SEQRES 10 B 186 ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE ILE SEQRES 11 B 186 GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG ASP SEQRES 12 B 186 ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN TYR SEQRES 13 B 186 VAL ALA ALA HIS PRO GLY GLU VAL CYS PRO ALA LYS TRP SEQRES 14 B 186 LYS GLU GLY GLU ALA THR LEU ALA PRO SER LEU ASP LEU SEQRES 15 B 186 VAL GLY LYS ILE SEQRES 1 C 186 SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN GLN SEQRES 2 C 186 ALA PHE LYS ASN GLY GLU PHE ILE GLU VAL THR GLU LYS SEQRES 3 C 186 ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR PRO SEQRES 4 C 186 ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY ASP SEQRES 5 C 186 VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY VAL SEQRES 6 C 186 ASP VAL TYR SER VAL SER THR ASP THR HIS PHE THR HIS SEQRES 7 C 186 LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS ILE SEQRES 8 C 186 LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU THR SEQRES 9 C 186 ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU ALA SEQRES 10 C 186 ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE ILE SEQRES 11 C 186 GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG ASP SEQRES 12 C 186 ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN TYR SEQRES 13 C 186 VAL ALA ALA HIS PRO GLY GLU VAL CYS PRO ALA LYS TRP SEQRES 14 C 186 LYS GLU GLY GLU ALA THR LEU ALA PRO SER LEU ASP LEU SEQRES 15 C 186 VAL GLY LYS ILE SEQRES 1 D 186 SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN GLN SEQRES 2 D 186 ALA PHE LYS ASN GLY GLU PHE ILE GLU VAL THR GLU LYS SEQRES 3 D 186 ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR PRO SEQRES 4 D 186 ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY ASP SEQRES 5 D 186 VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY VAL SEQRES 6 D 186 ASP VAL TYR SER VAL SER THR ASP THR HIS PHE THR HIS SEQRES 7 D 186 LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS ILE SEQRES 8 D 186 LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU THR SEQRES 9 D 186 ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU ALA SEQRES 10 D 186 ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE ILE SEQRES 11 D 186 GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG ASP SEQRES 12 D 186 ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN TYR SEQRES 13 D 186 VAL ALA ALA HIS PRO GLY GLU VAL CYS PRO ALA LYS TRP SEQRES 14 D 186 LYS GLU GLY GLU ALA THR LEU ALA PRO SER LEU ASP LEU SEQRES 15 D 186 VAL GLY LYS ILE SEQRES 1 E 186 SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN GLN SEQRES 2 E 186 ALA PHE LYS ASN GLY GLU PHE ILE GLU VAL THR GLU LYS SEQRES 3 E 186 ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR PRO SEQRES 4 E 186 ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY ASP SEQRES 5 E 186 VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY VAL SEQRES 6 E 186 ASP VAL TYR SER VAL SER THR ASP THR HIS PHE THR HIS SEQRES 7 E 186 LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS ILE SEQRES 8 E 186 LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU THR SEQRES 9 E 186 ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU ALA SEQRES 10 E 186 ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE ILE SEQRES 11 E 186 GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG ASP SEQRES 12 E 186 ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN TYR SEQRES 13 E 186 VAL ALA ALA HIS PRO GLY GLU VAL CYS PRO ALA LYS TRP SEQRES 14 E 186 LYS GLU GLY GLU ALA THR LEU ALA PRO SER LEU ASP LEU SEQRES 15 E 186 VAL GLY LYS ILE HET CL A 201 1 HET K A 202 1 HET GOL A 203 14 HET CL B 201 1 HET K B 202 1 HET GOL B 203 14 HET CL C 201 1 HET GOL C 202 14 HET CL D 201 1 HET K D 202 1 HET GOL D 203 14 HET CL E 201 1 HETNAM CL CHLORIDE ION HETNAM K POTASSIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 6 CL 5(CL 1-) FORMUL 7 K 3(K 1+) FORMUL 8 GOL 4(C3 H8 O3) FORMUL 18 HOH *503(H2 O) HELIX 1 1 LYS A 26 GLU A 29 5 4 HELIX 2 2 PHE A 44 HIS A 56 1 13 HELIX 3 3 HIS A 56 LEU A 63 1 8 HELIX 4 4 THR A 74 SER A 85 1 12 HELIX 5 5 THR A 87 ILE A 91 5 5 HELIX 6 6 GLY A 101 PHE A 107 1 7 HELIX 7 7 ASP A 143 HIS A 160 1 18 HELIX 8 8 LYS B 26 GLU B 29 5 4 HELIX 9 9 PRO B 47 HIS B 56 1 10 HELIX 10 10 HIS B 56 LEU B 63 1 8 HELIX 11 11 THR B 74 SER B 85 1 12 HELIX 12 12 SER B 85 LYS B 90 1 6 HELIX 13 13 GLY B 101 PHE B 107 1 7 HELIX 14 14 ASP B 143 HIS B 160 1 18 HELIX 15 15 LYS C 26 GLU C 29 5 4 HELIX 16 16 PHE C 44 HIS C 56 1 13 HELIX 17 17 HIS C 56 LEU C 63 1 8 HELIX 18 18 THR C 74 SER C 85 1 12 HELIX 19 19 THR C 87 ILE C 91 5 5 HELIX 20 20 GLY C 101 PHE C 107 1 7 HELIX 21 21 ASP C 143 HIS C 160 1 18 HELIX 22 22 LYS D 26 GLU D 29 5 4 HELIX 23 23 PHE D 44 HIS D 56 1 13 HELIX 24 24 HIS D 56 LEU D 63 1 8 HELIX 25 25 THR D 74 SER D 85 1 12 HELIX 26 26 THR D 87 ILE D 91 5 5 HELIX 27 27 GLY D 101 PHE D 107 1 7 HELIX 28 28 ASP D 143 HIS D 160 1 18 HELIX 29 29 LYS E 26 GLU E 29 5 4 HELIX 30 30 PHE E 44 HIS E 56 1 13 HELIX 31 31 HIS E 56 LEU E 63 1 8 HELIX 32 32 THR E 74 SER E 85 1 12 HELIX 33 33 THR E 87 ILE E 91 5 5 HELIX 34 34 GLY E 101 PHE E 107 1 7 HELIX 35 35 ASP E 143 HIS E 160 1 18 SHEET 1 A14 GLU A 19 THR A 24 0 SHEET 2 A14 LYS A 11 LYS A 16 -1 N ASN A 12 O VAL A 23 SHEET 3 A14 ALA A 94 GLY A 97 -1 O MET A 95 N PHE A 15 SHEET 4 A14 VAL A 65 SER A 71 1 N SER A 69 O ILE A 96 SHEET 5 A14 TRP A 32 PHE A 37 1 N TRP A 32 O ASP A 66 SHEET 6 A14 ARG A 119 VAL A 124 -1 O VAL A 124 N SER A 33 SHEET 7 A14 ILE A 130 THR A 136 -1 O ALA A 132 N VAL A 123 SHEET 8 A14 ILE B 130 THR B 136 -1 O ILE B 133 N VAL A 135 SHEET 9 A14 ALA B 120 VAL B 124 -1 N VAL B 123 O GLN B 131 SHEET 10 A14 TRP B 32 PHE B 37 -1 N SER B 33 O VAL B 124 SHEET 11 A14 VAL B 65 SER B 71 1 O TYR B 68 N PHE B 36 SHEET 12 A14 ALA B 94 GLY B 97 1 O ILE B 96 N SER B 69 SHEET 13 A14 LYS B 11 LYS B 16 -1 N PHE B 15 O MET B 95 SHEET 14 A14 GLU B 19 THR B 24 -1 O VAL B 23 N ASN B 12 SHEET 1 B14 GLU C 19 THR C 24 0 SHEET 2 B14 LYS C 11 LYS C 16 -1 N LYS C 16 O GLU C 19 SHEET 3 B14 ALA C 94 GLY C 97 -1 O GLY C 97 N GLN C 13 SHEET 4 B14 VAL C 65 SER C 71 1 N SER C 69 O ILE C 96 SHEET 5 B14 TRP C 32 PHE C 37 1 N TRP C 32 O ASP C 66 SHEET 6 B14 ARG C 119 VAL C 124 -1 O VAL C 124 N SER C 33 SHEET 7 B14 ILE C 130 THR C 136 -1 O GLU C 134 N THR C 121 SHEET 8 B14 ILE D 130 THR D 136 -1 O VAL D 135 N ILE C 133 SHEET 9 B14 ARG D 119 VAL D 124 -1 N VAL D 123 O ALA D 132 SHEET 10 B14 TRP D 32 PHE D 37 -1 N SER D 33 O VAL D 124 SHEET 11 B14 VAL D 65 SER D 71 1 O TYR D 68 N PHE D 36 SHEET 12 B14 ALA D 94 GLY D 97 1 O ILE D 96 N SER D 69 SHEET 13 B14 LYS D 11 LYS D 16 -1 N PHE D 15 O MET D 95 SHEET 14 B14 GLU D 19 THR D 24 -1 O VAL D 23 N ASN D 12 SHEET 1 C 7 GLU E 19 THR E 24 0 SHEET 2 C 7 LYS E 11 LYS E 16 -1 N ASN E 12 O VAL E 23 SHEET 3 C 7 ALA E 94 GLY E 97 -1 O MET E 95 N PHE E 15 SHEET 4 C 7 VAL E 65 SER E 71 1 N SER E 69 O ILE E 96 SHEET 5 C 7 TRP E 32 PHE E 37 1 N TRP E 32 O ASP E 66 SHEET 6 C 7 ARG E 119 VAL E 124 -1 O ALA E 120 N PHE E 37 SHEET 7 C 7 ILE E 130 THR E 136 -1 O GLU E 134 N THR E 121 LINK O THR A 72 K K A 202 1555 1555 2.74 LINK K K A 202 O HOH A1064 1555 1555 2.82 LINK K K A 202 O HOH A1087 1555 1555 3.02 LINK O THR B 72 K K B 202 1555 1555 2.95 LINK K K B 202 O HOH B1014 1555 1555 2.52 LINK K K B 202 O HOH B1279 1555 1555 3.08 LINK K K B 202 O THR C 72 1555 1555 2.72 LINK K K B 202 O HOH C1047 1555 1555 2.56 LINK K K B 202 O HOH C1234 1555 1555 3.01 LINK O THR D 72 K K D 202 1555 1555 2.76 LINK K K D 202 O HOH D1195 1555 1555 3.05 LINK K K D 202 O HOH D1373 1555 1555 2.65 LINK K K D 202 O THR E 72 1555 1555 2.77 LINK K K D 202 O HOH E1106 1555 1555 2.55 LINK K K D 202 O HOH E1261 1555 1555 3.03 SITE 1 AC1 5 SER A 1 LEU A 2 HOH A1006 HOH A1011 SITE 2 AC1 5 HOH A1089 SITE 1 AC2 3 THR A 72 HOH A1064 HOH A1087 SITE 1 AC3 5 PRO A 39 PHE A 44 ARG A 111 GLU A 138 SITE 2 AC3 5 HOH A1154 SITE 1 AC4 5 HOH A1011 SER B 1 LEU B 2 HOH B1073 SITE 2 AC4 5 HOH B1096 SITE 1 AC5 6 THR B 72 HOH B1014 HOH B1279 THR C 72 SITE 2 AC5 6 HOH C1047 HOH C1234 SITE 1 AC6 5 GLU B 59 LEU B 63 LYS B 152 GLY D 30 SITE 2 AC6 5 HOH D1292 SITE 1 AC7 5 SER C 1 LEU C 2 HOH C1030 HOH C1052 SITE 2 AC7 5 HOH D1053 SITE 1 AC8 6 PHE B 76 PRO C 39 GLU C 114 LEU C 116 SITE 2 AC8 6 GLU C 138 HOH C1253 SITE 1 AC9 4 SER D 1 LEU D 2 HOH D1053 HOH D1054 SITE 1 BC1 6 THR D 72 HOH D1195 HOH D1373 THR E 72 SITE 2 BC1 6 HOH E1106 HOH E1261 SITE 1 BC2 8 LEU B 63 GLN B 155 HOH B1114 HOH B1299 SITE 2 BC2 8 ARG D 31 GLN D 61 GLY D 64 HOH D1141 SITE 1 BC3 5 SER E 1 LEU E 2 ILE E 133 HOH E1218 SITE 2 BC3 5 HOH E1465 CRYST1 126.840 171.150 135.320 90.00 90.00 90.00 C 2 2 21 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007884 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007390 0.00000