data_4MAK # _entry.id 4MAK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4MAK pdb_00004mak 10.2210/pdb4mak/pdb RCSB RCSB081673 ? ? WWPDB D_1000081673 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-04 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MAK _pdbx_database_status.recvd_initial_deposition_date 2013-08-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-apc108948 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nocek, B.' 1 'Skarina, T.' 2 'Brown, G.' 3 'Yakunin, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Crystal structure of a putative ssRNA endonuclease Cas2, CRISPR adaptation protein from E.coli' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nocek, B.' 1 ? primary 'Skarina, T.' 2 ? primary 'Brown, G.' 3 ? primary 'Yakunin, A.' 4 ? primary 'Joachimiak, A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CRISPR-associated endoribonuclease Cas2' 10527.212 2 3.1.-.- ? ? ? 2 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 3 water nat water 18.015 231 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTP VDLDGLRLVSFLPV ; _entity_poly.pdbx_seq_one_letter_code_can ;MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTP VDLDGLRLVSFLPV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier MCSG-apc108948 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DI(HYDROXYETHYL)ETHER' PEG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 MET n 1 4 LEU n 1 5 VAL n 1 6 VAL n 1 7 VAL n 1 8 THR n 1 9 GLU n 1 10 ASN n 1 11 VAL n 1 12 PRO n 1 13 PRO n 1 14 ARG n 1 15 LEU n 1 16 ARG n 1 17 GLY n 1 18 ARG n 1 19 LEU n 1 20 ALA n 1 21 ILE n 1 22 TRP n 1 23 LEU n 1 24 LEU n 1 25 GLU n 1 26 VAL n 1 27 ARG n 1 28 ALA n 1 29 GLY n 1 30 VAL n 1 31 TYR n 1 32 VAL n 1 33 GLY n 1 34 ASP n 1 35 VAL n 1 36 SER n 1 37 ALA n 1 38 LYS n 1 39 ILE n 1 40 ARG n 1 41 GLU n 1 42 MET n 1 43 ILE n 1 44 TRP n 1 45 GLU n 1 46 GLN n 1 47 ILE n 1 48 ALA n 1 49 GLY n 1 50 LEU n 1 51 ALA n 1 52 GLU n 1 53 GLU n 1 54 GLY n 1 55 ASN n 1 56 VAL n 1 57 VAL n 1 58 MET n 1 59 ALA n 1 60 TRP n 1 61 ALA n 1 62 THR n 1 63 ASN n 1 64 THR n 1 65 GLU n 1 66 THR n 1 67 GLY n 1 68 PHE n 1 69 GLU n 1 70 PHE n 1 71 GLN n 1 72 THR n 1 73 PHE n 1 74 GLY n 1 75 LEU n 1 76 ASN n 1 77 ARG n 1 78 ARG n 1 79 THR n 1 80 PRO n 1 81 VAL n 1 82 ASP n 1 83 LEU n 1 84 ASP n 1 85 GLY n 1 86 LEU n 1 87 ARG n 1 88 LEU n 1 89 VAL n 1 90 SER n 1 91 PHE n 1 92 LEU n 1 93 PRO n 1 94 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ygbF, cas2, b2754, JW5438' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'K12 substr. MG1655' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 511145 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 TRP 44 44 44 TRP TRP A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LEU 75 75 ? ? ? A . n A 1 76 ASN 76 76 ? ? ? A . n A 1 77 ARG 77 77 ? ? ? A . n A 1 78 ARG 78 78 ? ? ? A . n A 1 79 THR 79 79 ? ? ? A . n A 1 80 PRO 80 80 ? ? ? A . n A 1 81 VAL 81 81 ? ? ? A . n A 1 82 ASP 82 82 ? ? ? A . n A 1 83 LEU 83 83 ? ? ? A . n A 1 84 ASP 84 84 ? ? ? A . n A 1 85 GLY 85 85 ? ? ? A . n A 1 86 LEU 86 86 ? ? ? A . n A 1 87 ARG 87 87 ? ? ? A . n A 1 88 LEU 88 88 ? ? ? A . n A 1 89 VAL 89 89 ? ? ? A . n A 1 90 SER 90 90 ? ? ? A . n A 1 91 PHE 91 91 ? ? ? A . n A 1 92 LEU 92 92 ? ? ? A . n A 1 93 PRO 93 93 ? ? ? A . n A 1 94 VAL 94 94 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 MET 3 3 3 MET MET B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 PRO 12 12 12 PRO PRO B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 ARG 16 16 16 ARG ARG B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 TRP 22 22 22 TRP TRP B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 TYR 31 31 31 TYR TYR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 ASP 34 34 34 ASP ASP B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 ILE 39 39 39 ILE ILE B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 MET 42 42 42 MET MET B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 TRP 44 44 44 TRP TRP B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 GLN 46 46 46 GLN GLN B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 MET 58 58 58 MET MET B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 TRP 60 60 60 TRP TRP B . n B 1 61 ALA 61 61 61 ALA ALA B . n B 1 62 THR 62 62 62 THR THR B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 THR 64 64 64 THR THR B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 PHE 68 68 68 PHE PHE B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 PHE 70 70 70 PHE PHE B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 THR 72 72 72 THR THR B . n B 1 73 PHE 73 73 73 PHE PHE B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 ARG 77 77 77 ARG ARG B . n B 1 78 ARG 78 78 ? ? ? B . n B 1 79 THR 79 79 ? ? ? B . n B 1 80 PRO 80 80 ? ? ? B . n B 1 81 VAL 81 81 ? ? ? B . n B 1 82 ASP 82 82 ? ? ? B . n B 1 83 LEU 83 83 ? ? ? B . n B 1 84 ASP 84 84 ? ? ? B . n B 1 85 GLY 85 85 ? ? ? B . n B 1 86 LEU 86 86 ? ? ? B . n B 1 87 ARG 87 87 ? ? ? B . n B 1 88 LEU 88 88 ? ? ? B . n B 1 89 VAL 89 89 ? ? ? B . n B 1 90 SER 90 90 ? ? ? B . n B 1 91 PHE 91 91 ? ? ? B . n B 1 92 LEU 92 92 ? ? ? B . n B 1 93 PRO 93 93 ? ? ? B . n B 1 94 VAL 94 94 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG 1 301 301 PEG PEG B . D 3 HOH 1 101 2 HOH HOH A . D 3 HOH 2 102 3 HOH HOH A . D 3 HOH 3 103 12 HOH HOH A . D 3 HOH 4 104 13 HOH HOH A . D 3 HOH 5 105 15 HOH HOH A . D 3 HOH 6 106 17 HOH HOH A . D 3 HOH 7 107 18 HOH HOH A . D 3 HOH 8 108 19 HOH HOH A . D 3 HOH 9 109 20 HOH HOH A . D 3 HOH 10 110 21 HOH HOH A . D 3 HOH 11 111 23 HOH HOH A . D 3 HOH 12 112 24 HOH HOH A . D 3 HOH 13 113 33 HOH HOH A . D 3 HOH 14 114 34 HOH HOH A . D 3 HOH 15 115 35 HOH HOH A . D 3 HOH 16 116 36 HOH HOH A . D 3 HOH 17 117 37 HOH HOH A . D 3 HOH 18 118 38 HOH HOH A . D 3 HOH 19 119 39 HOH HOH A . D 3 HOH 20 120 40 HOH HOH A . D 3 HOH 21 121 42 HOH HOH A . D 3 HOH 22 122 44 HOH HOH A . D 3 HOH 23 123 45 HOH HOH A . D 3 HOH 24 124 48 HOH HOH A . D 3 HOH 25 125 50 HOH HOH A . D 3 HOH 26 126 53 HOH HOH A . D 3 HOH 27 127 54 HOH HOH A . D 3 HOH 28 128 56 HOH HOH A . D 3 HOH 29 129 58 HOH HOH A . D 3 HOH 30 130 61 HOH HOH A . D 3 HOH 31 131 62 HOH HOH A . D 3 HOH 32 132 66 HOH HOH A . D 3 HOH 33 133 68 HOH HOH A . D 3 HOH 34 134 70 HOH HOH A . D 3 HOH 35 135 71 HOH HOH A . D 3 HOH 36 136 72 HOH HOH A . D 3 HOH 37 137 73 HOH HOH A . D 3 HOH 38 138 76 HOH HOH A . D 3 HOH 39 139 77 HOH HOH A . D 3 HOH 40 140 79 HOH HOH A . D 3 HOH 41 141 80 HOH HOH A . D 3 HOH 42 142 81 HOH HOH A . D 3 HOH 43 143 83 HOH HOH A . D 3 HOH 44 144 86 HOH HOH A . D 3 HOH 45 145 88 HOH HOH A . D 3 HOH 46 146 89 HOH HOH A . D 3 HOH 47 147 90 HOH HOH A . D 3 HOH 48 148 92 HOH HOH A . D 3 HOH 49 149 94 HOH HOH A . D 3 HOH 50 150 96 HOH HOH A . D 3 HOH 51 151 98 HOH HOH A . D 3 HOH 52 152 100 HOH HOH A . D 3 HOH 53 153 103 HOH HOH A . D 3 HOH 54 154 105 HOH HOH A . D 3 HOH 55 155 107 HOH HOH A . D 3 HOH 56 156 109 HOH HOH A . D 3 HOH 57 157 113 HOH HOH A . D 3 HOH 58 158 114 HOH HOH A . D 3 HOH 59 159 118 HOH HOH A . D 3 HOH 60 160 122 HOH HOH A . D 3 HOH 61 161 128 HOH HOH A . D 3 HOH 62 162 133 HOH HOH A . D 3 HOH 63 163 134 HOH HOH A . D 3 HOH 64 164 137 HOH HOH A . D 3 HOH 65 165 138 HOH HOH A . D 3 HOH 66 166 139 HOH HOH A . D 3 HOH 67 167 141 HOH HOH A . D 3 HOH 68 168 145 HOH HOH A . D 3 HOH 69 169 146 HOH HOH A . D 3 HOH 70 170 148 HOH HOH A . D 3 HOH 71 171 152 HOH HOH A . D 3 HOH 72 172 153 HOH HOH A . D 3 HOH 73 173 167 HOH HOH A . D 3 HOH 74 174 170 HOH HOH A . D 3 HOH 75 175 171 HOH HOH A . D 3 HOH 76 176 173 HOH HOH A . D 3 HOH 77 177 175 HOH HOH A . D 3 HOH 78 178 176 HOH HOH A . D 3 HOH 79 179 177 HOH HOH A . D 3 HOH 80 180 181 HOH HOH A . D 3 HOH 81 181 182 HOH HOH A . D 3 HOH 82 182 184 HOH HOH A . D 3 HOH 83 183 186 HOH HOH A . D 3 HOH 84 184 187 HOH HOH A . D 3 HOH 85 185 199 HOH HOH A . D 3 HOH 86 186 203 HOH HOH A . D 3 HOH 87 187 212 HOH HOH A . D 3 HOH 88 188 219 HOH HOH A . D 3 HOH 89 189 220 HOH HOH A . D 3 HOH 90 190 226 HOH HOH A . D 3 HOH 91 191 227 HOH HOH A . D 3 HOH 92 192 234 HOH HOH A . D 3 HOH 93 193 240 HOH HOH A . D 3 HOH 94 194 241 HOH HOH A . D 3 HOH 95 195 243 HOH HOH A . D 3 HOH 96 196 244 HOH HOH A . D 3 HOH 97 197 247 HOH HOH A . D 3 HOH 98 198 248 HOH HOH A . D 3 HOH 99 199 249 HOH HOH A . D 3 HOH 100 200 250 HOH HOH A . D 3 HOH 101 201 251 HOH HOH A . D 3 HOH 102 202 252 HOH HOH A . D 3 HOH 103 203 253 HOH HOH A . D 3 HOH 104 204 255 HOH HOH A . D 3 HOH 105 205 256 HOH HOH A . D 3 HOH 106 206 258 HOH HOH A . D 3 HOH 107 207 259 HOH HOH A . D 3 HOH 108 208 261 HOH HOH A . E 3 HOH 1 401 1 HOH HOH B . E 3 HOH 2 402 5 HOH HOH B . E 3 HOH 3 403 6 HOH HOH B . E 3 HOH 4 404 7 HOH HOH B . E 3 HOH 5 405 8 HOH HOH B . E 3 HOH 6 406 9 HOH HOH B . E 3 HOH 7 407 10 HOH HOH B . E 3 HOH 8 408 11 HOH HOH B . E 3 HOH 9 409 14 HOH HOH B . E 3 HOH 10 410 16 HOH HOH B . E 3 HOH 11 411 22 HOH HOH B . E 3 HOH 12 412 25 HOH HOH B . E 3 HOH 13 413 26 HOH HOH B . E 3 HOH 14 414 27 HOH HOH B . E 3 HOH 15 415 28 HOH HOH B . E 3 HOH 16 416 29 HOH HOH B . E 3 HOH 17 417 30 HOH HOH B . E 3 HOH 18 418 31 HOH HOH B . E 3 HOH 19 419 32 HOH HOH B . E 3 HOH 20 420 41 HOH HOH B . E 3 HOH 21 421 43 HOH HOH B . E 3 HOH 22 422 46 HOH HOH B . E 3 HOH 23 423 47 HOH HOH B . E 3 HOH 24 424 49 HOH HOH B . E 3 HOH 25 425 51 HOH HOH B . E 3 HOH 26 426 52 HOH HOH B . E 3 HOH 27 427 55 HOH HOH B . E 3 HOH 28 428 57 HOH HOH B . E 3 HOH 29 429 59 HOH HOH B . E 3 HOH 30 430 60 HOH HOH B . E 3 HOH 31 431 63 HOH HOH B . E 3 HOH 32 432 64 HOH HOH B . E 3 HOH 33 433 65 HOH HOH B . E 3 HOH 34 434 67 HOH HOH B . E 3 HOH 35 435 69 HOH HOH B . E 3 HOH 36 436 74 HOH HOH B . E 3 HOH 37 437 75 HOH HOH B . E 3 HOH 38 438 78 HOH HOH B . E 3 HOH 39 439 82 HOH HOH B . E 3 HOH 40 440 84 HOH HOH B . E 3 HOH 41 441 85 HOH HOH B . E 3 HOH 42 442 87 HOH HOH B . E 3 HOH 43 443 91 HOH HOH B . E 3 HOH 44 444 93 HOH HOH B . E 3 HOH 45 445 95 HOH HOH B . E 3 HOH 46 446 97 HOH HOH B . E 3 HOH 47 447 99 HOH HOH B . E 3 HOH 48 448 102 HOH HOH B . E 3 HOH 49 449 104 HOH HOH B . E 3 HOH 50 450 106 HOH HOH B . E 3 HOH 51 451 108 HOH HOH B . E 3 HOH 52 452 110 HOH HOH B . E 3 HOH 53 453 111 HOH HOH B . E 3 HOH 54 454 112 HOH HOH B . E 3 HOH 55 455 115 HOH HOH B . E 3 HOH 56 456 116 HOH HOH B . E 3 HOH 57 457 117 HOH HOH B . E 3 HOH 58 458 119 HOH HOH B . E 3 HOH 59 459 120 HOH HOH B . E 3 HOH 60 460 121 HOH HOH B . E 3 HOH 61 461 123 HOH HOH B . E 3 HOH 62 462 125 HOH HOH B . E 3 HOH 63 463 126 HOH HOH B . E 3 HOH 64 464 127 HOH HOH B . E 3 HOH 65 465 129 HOH HOH B . E 3 HOH 66 466 130 HOH HOH B . E 3 HOH 67 467 131 HOH HOH B . E 3 HOH 68 468 135 HOH HOH B . E 3 HOH 69 469 136 HOH HOH B . E 3 HOH 70 470 143 HOH HOH B . E 3 HOH 71 471 144 HOH HOH B . E 3 HOH 72 472 147 HOH HOH B . E 3 HOH 73 473 149 HOH HOH B . E 3 HOH 74 474 150 HOH HOH B . E 3 HOH 75 475 151 HOH HOH B . E 3 HOH 76 476 156 HOH HOH B . E 3 HOH 77 477 157 HOH HOH B . E 3 HOH 78 478 158 HOH HOH B . E 3 HOH 79 479 160 HOH HOH B . E 3 HOH 80 480 162 HOH HOH B . E 3 HOH 81 481 163 HOH HOH B . E 3 HOH 82 482 164 HOH HOH B . E 3 HOH 83 483 165 HOH HOH B . E 3 HOH 84 484 166 HOH HOH B . E 3 HOH 85 485 168 HOH HOH B . E 3 HOH 86 486 169 HOH HOH B . E 3 HOH 87 487 172 HOH HOH B . E 3 HOH 88 488 178 HOH HOH B . E 3 HOH 89 489 180 HOH HOH B . E 3 HOH 90 490 190 HOH HOH B . E 3 HOH 91 491 191 HOH HOH B . E 3 HOH 92 492 192 HOH HOH B . E 3 HOH 93 493 193 HOH HOH B . E 3 HOH 94 494 196 HOH HOH B . E 3 HOH 95 495 202 HOH HOH B . E 3 HOH 96 496 205 HOH HOH B . E 3 HOH 97 497 213 HOH HOH B . E 3 HOH 98 498 214 HOH HOH B . E 3 HOH 99 499 215 HOH HOH B . E 3 HOH 100 500 218 HOH HOH B . E 3 HOH 101 501 221 HOH HOH B . E 3 HOH 102 502 222 HOH HOH B . E 3 HOH 103 503 224 HOH HOH B . E 3 HOH 104 504 225 HOH HOH B . E 3 HOH 105 505 228 HOH HOH B . E 3 HOH 106 506 229 HOH HOH B . E 3 HOH 107 507 231 HOH HOH B . E 3 HOH 108 508 232 HOH HOH B . E 3 HOH 109 509 236 HOH HOH B . E 3 HOH 110 510 237 HOH HOH B . E 3 HOH 111 511 238 HOH HOH B . E 3 HOH 112 512 239 HOH HOH B . E 3 HOH 113 513 245 HOH HOH B . E 3 HOH 114 514 254 HOH HOH B . E 3 HOH 115 515 257 HOH HOH B . E 3 HOH 116 516 263 HOH HOH B . E 3 HOH 117 517 264 HOH HOH B . E 3 HOH 118 518 265 HOH HOH B . E 3 HOH 119 519 266 HOH HOH B . E 3 HOH 120 520 267 HOH HOH B . E 3 HOH 121 521 268 HOH HOH B . E 3 HOH 122 522 269 HOH HOH B . E 3 HOH 123 523 270 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 53 ? CG ? B GLU 53 CG 2 1 Y 1 B GLU 53 ? CD ? B GLU 53 CD 3 1 Y 1 B GLU 53 ? OE1 ? B GLU 53 OE1 4 1 Y 1 B GLU 53 ? OE2 ? B GLU 53 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 CCP4 'model building' . ? 2 MOLREP phasing . ? 3 REFMAC refinement 5.7.0029 ? 4 HKL-3000 'data reduction' . ? 5 HKL-3000 'data scaling' . ? 6 CCP4 phasing . ? 7 # _cell.entry_id 4MAK _cell.length_a 30.048 _cell.length_b 66.009 _cell.length_c 69.972 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MAK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4MAK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_percent_sol 25.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.1M KCl, 10mM MgCl2, Na Citr 0.1M ph 6, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-10-04 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.10 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 28 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4MAK _reflns.B_iso_Wilson_estimate 21.9 _reflns.percent_possible_obs 93 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 57350 _reflns.d_resolution_low 33.03 _reflns.pdbx_redundancy 5.6 _reflns.number_obs 53336 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.10 _reflns_shell.d_res_low 1.12 _reflns_shell.percent_possible_all 52 _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.1 _refine.overall_SU_B 0.863 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4MAK _refine.aniso_B[2][3] 0.00 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.019 _refine.aniso_B[1][3] 0.00 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.aniso_B[3][3] 0.11 _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] -0.30 _refine.pdbx_overall_ESU_R 0.034 _refine.ls_R_factor_obs 0.13629 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.correlation_coeff_Fo_to_Fc 0.982 _refine.ls_number_reflns_R_free 2427 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.pdbx_ls_sigma_F 2 _refine.ls_percent_reflns_obs 83.13 _refine.ls_R_factor_R_work 0.13240 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.10 _refine.pdbx_overall_ESU_R_Free 0.037 _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 22.269 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.1360 _refine.aniso_B[2][2] 0.19 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I 2 _refine.ls_d_res_low 33.03 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details MASK _refine.aniso_B[1][2] 0.00 _refine.ls_R_factor_R_free 0.17333 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 45153 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_number_reflns_all 47580 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1165 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 231 _refine_hist.number_atoms_total 1403 _refine_hist.d_res_high 1.10 _refine_hist.d_res_low 33.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.020 ? 1210 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1186 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.763 1.941 ? 1648 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.846 3.000 ? 2703 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.680 5.000 ? 153 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 32.248 23.455 ? 55 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.708 15.000 ? 201 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.558 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.098 0.200 ? 190 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.010 0.020 ? 1369 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 286 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3.263 3.000 ? 2396 ? 'X-RAY DIFFRACTION' r_sphericity_free 37.657 5.000 ? 18 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 12.010 5.000 ? 2591 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.101 _refine_ls_shell.d_res_low 1.130 _refine_ls_shell.number_reflns_R_work 812 _refine_ls_shell.R_factor_R_work 0.245 _refine_ls_shell.percent_reflns_obs 20.68 _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4MAK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4MAK _struct.title 'Crystal structure of a putative ssRNA endonuclease Cas2, CRISPR adaptation protein from E.coli' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'CAS2, CRISPR, MCSG, PSI-BIOLOGY, Structural Genomics, Midwest Center for Structural Genomics, HYDROLASE' _struct_keywords.entry_id 4MAK # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CAS2_ECOLI _struct_ref.pdbx_db_accession P45956 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTP VDLDGLRLVSFLPV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4MAK A 1 ? 94 ? P45956 1 ? 94 ? 1 94 2 1 4MAK B 1 ? 94 ? P45956 1 ? 94 ? 1 94 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1850 ? 1 MORE -19 ? 1 'SSA (A^2)' 7780 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? LEU A 23 ? PRO A 12 LEU A 23 1 ? 12 HELX_P HELX_P2 2 SER A 36 ? ALA A 51 ? SER A 36 ALA A 51 1 ? 16 HELX_P HELX_P3 3 PRO B 12 ? LEU B 23 ? PRO B 12 LEU B 23 1 ? 12 HELX_P HELX_P4 4 SER B 36 ? ALA B 51 ? SER B 36 ALA B 51 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 24 ? ARG A 27 ? LEU A 24 ARG A 27 A 2 VAL A 30 ? ASP A 34 ? VAL A 30 ASP A 34 A 3 MET A 3 ? GLU A 9 ? MET A 3 GLU A 9 A 4 ASN A 55 ? ALA A 61 ? ASN A 55 ALA A 61 A 5 PHE A 68 ? PHE A 73 ? PHE A 68 PHE A 73 B 1 LEU B 24 ? ARG B 27 ? LEU B 24 ARG B 27 B 2 VAL B 30 ? ASP B 34 ? VAL B 30 ASP B 34 B 3 MET B 3 ? GLU B 9 ? MET B 3 GLU B 9 B 4 ASN B 55 ? ALA B 61 ? ASN B 55 ALA B 61 B 5 PHE B 68 ? GLY B 74 ? PHE B 68 GLY B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 24 ? N LEU A 24 O VAL A 32 ? O VAL A 32 A 2 3 O TYR A 31 ? O TYR A 31 N VAL A 6 ? N VAL A 6 A 3 4 N VAL A 5 ? N VAL A 5 O ALA A 59 ? O ALA A 59 A 4 5 N MET A 58 ? N MET A 58 O GLN A 71 ? O GLN A 71 B 1 2 N LEU B 24 ? N LEU B 24 O VAL B 32 ? O VAL B 32 B 2 3 O TYR B 31 ? O TYR B 31 N VAL B 6 ? N VAL B 6 B 3 4 N VAL B 5 ? N VAL B 5 O ALA B 59 ? O ALA B 59 B 4 5 N MET B 58 ? N MET B 58 O GLN B 71 ? O GLN B 71 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id PEG _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE PEG B 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 LEU A 24 ? LEU A 24 . ? 1_555 ? 2 AC1 11 HOH D . ? HOH A 188 . ? 1_655 ? 3 AC1 11 LEU B 24 ? LEU B 24 . ? 1_655 ? 4 AC1 11 PHE B 70 ? PHE B 70 . ? 1_555 ? 5 AC1 11 HOH E . ? HOH B 422 . ? 1_655 ? 6 AC1 11 HOH E . ? HOH B 436 . ? 1_555 ? 7 AC1 11 HOH E . ? HOH B 440 . ? 1_555 ? 8 AC1 11 HOH E . ? HOH B 449 . ? 1_655 ? 9 AC1 11 HOH E . ? HOH B 479 . ? 1_655 ? 10 AC1 11 HOH E . ? HOH B 500 . ? 1_555 ? 11 AC1 11 HOH E . ? HOH B 514 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 52 ? ? 54.77 -119.64 2 1 ASN A 63 ? ? -96.22 45.84 3 1 GLU B 52 ? ? 63.90 -118.89 # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG _pdbx_SG_project.id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 75 ? A LEU 75 3 1 Y 1 A ASN 76 ? A ASN 76 4 1 Y 1 A ARG 77 ? A ARG 77 5 1 Y 1 A ARG 78 ? A ARG 78 6 1 Y 1 A THR 79 ? A THR 79 7 1 Y 1 A PRO 80 ? A PRO 80 8 1 Y 1 A VAL 81 ? A VAL 81 9 1 Y 1 A ASP 82 ? A ASP 82 10 1 Y 1 A LEU 83 ? A LEU 83 11 1 Y 1 A ASP 84 ? A ASP 84 12 1 Y 1 A GLY 85 ? A GLY 85 13 1 Y 1 A LEU 86 ? A LEU 86 14 1 Y 1 A ARG 87 ? A ARG 87 15 1 Y 1 A LEU 88 ? A LEU 88 16 1 Y 1 A VAL 89 ? A VAL 89 17 1 Y 1 A SER 90 ? A SER 90 18 1 Y 1 A PHE 91 ? A PHE 91 19 1 Y 1 A LEU 92 ? A LEU 92 20 1 Y 1 A PRO 93 ? A PRO 93 21 1 Y 1 A VAL 94 ? A VAL 94 22 1 Y 1 B MET 1 ? B MET 1 23 1 Y 1 B ARG 78 ? B ARG 78 24 1 Y 1 B THR 79 ? B THR 79 25 1 Y 1 B PRO 80 ? B PRO 80 26 1 Y 1 B VAL 81 ? B VAL 81 27 1 Y 1 B ASP 82 ? B ASP 82 28 1 Y 1 B LEU 83 ? B LEU 83 29 1 Y 1 B ASP 84 ? B ASP 84 30 1 Y 1 B GLY 85 ? B GLY 85 31 1 Y 1 B LEU 86 ? B LEU 86 32 1 Y 1 B ARG 87 ? B ARG 87 33 1 Y 1 B LEU 88 ? B LEU 88 34 1 Y 1 B VAL 89 ? B VAL 89 35 1 Y 1 B SER 90 ? B SER 90 36 1 Y 1 B PHE 91 ? B PHE 91 37 1 Y 1 B LEU 92 ? B LEU 92 38 1 Y 1 B PRO 93 ? B PRO 93 39 1 Y 1 B VAL 94 ? B VAL 94 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LYS N N N N 170 LYS CA C N S 171 LYS C C N N 172 LYS O O N N 173 LYS CB C N N 174 LYS CG C N N 175 LYS CD C N N 176 LYS CE C N N 177 LYS NZ N N N 178 LYS OXT O N N 179 LYS H H N N 180 LYS H2 H N N 181 LYS HA H N N 182 LYS HB2 H N N 183 LYS HB3 H N N 184 LYS HG2 H N N 185 LYS HG3 H N N 186 LYS HD2 H N N 187 LYS HD3 H N N 188 LYS HE2 H N N 189 LYS HE3 H N N 190 LYS HZ1 H N N 191 LYS HZ2 H N N 192 LYS HZ3 H N N 193 LYS HXT H N N 194 MET N N N N 195 MET CA C N S 196 MET C C N N 197 MET O O N N 198 MET CB C N N 199 MET CG C N N 200 MET SD S N N 201 MET CE C N N 202 MET OXT O N N 203 MET H H N N 204 MET H2 H N N 205 MET HA H N N 206 MET HB2 H N N 207 MET HB3 H N N 208 MET HG2 H N N 209 MET HG3 H N N 210 MET HE1 H N N 211 MET HE2 H N N 212 MET HE3 H N N 213 MET HXT H N N 214 PEG C1 C N N 215 PEG O1 O N N 216 PEG C2 C N N 217 PEG O2 O N N 218 PEG C3 C N N 219 PEG C4 C N N 220 PEG O4 O N N 221 PEG H11 H N N 222 PEG H12 H N N 223 PEG HO1 H N N 224 PEG H21 H N N 225 PEG H22 H N N 226 PEG H31 H N N 227 PEG H32 H N N 228 PEG H41 H N N 229 PEG H42 H N N 230 PEG HO4 H N N 231 PHE N N N N 232 PHE CA C N S 233 PHE C C N N 234 PHE O O N N 235 PHE CB C N N 236 PHE CG C Y N 237 PHE CD1 C Y N 238 PHE CD2 C Y N 239 PHE CE1 C Y N 240 PHE CE2 C Y N 241 PHE CZ C Y N 242 PHE OXT O N N 243 PHE H H N N 244 PHE H2 H N N 245 PHE HA H N N 246 PHE HB2 H N N 247 PHE HB3 H N N 248 PHE HD1 H N N 249 PHE HD2 H N N 250 PHE HE1 H N N 251 PHE HE2 H N N 252 PHE HZ H N N 253 PHE HXT H N N 254 PRO N N N N 255 PRO CA C N S 256 PRO C C N N 257 PRO O O N N 258 PRO CB C N N 259 PRO CG C N N 260 PRO CD C N N 261 PRO OXT O N N 262 PRO H H N N 263 PRO HA H N N 264 PRO HB2 H N N 265 PRO HB3 H N N 266 PRO HG2 H N N 267 PRO HG3 H N N 268 PRO HD2 H N N 269 PRO HD3 H N N 270 PRO HXT H N N 271 SER N N N N 272 SER CA C N S 273 SER C C N N 274 SER O O N N 275 SER CB C N N 276 SER OG O N N 277 SER OXT O N N 278 SER H H N N 279 SER H2 H N N 280 SER HA H N N 281 SER HB2 H N N 282 SER HB3 H N N 283 SER HG H N N 284 SER HXT H N N 285 THR N N N N 286 THR CA C N S 287 THR C C N N 288 THR O O N N 289 THR CB C N R 290 THR OG1 O N N 291 THR CG2 C N N 292 THR OXT O N N 293 THR H H N N 294 THR H2 H N N 295 THR HA H N N 296 THR HB H N N 297 THR HG1 H N N 298 THR HG21 H N N 299 THR HG22 H N N 300 THR HG23 H N N 301 THR HXT H N N 302 TRP N N N N 303 TRP CA C N S 304 TRP C C N N 305 TRP O O N N 306 TRP CB C N N 307 TRP CG C Y N 308 TRP CD1 C Y N 309 TRP CD2 C Y N 310 TRP NE1 N Y N 311 TRP CE2 C Y N 312 TRP CE3 C Y N 313 TRP CZ2 C Y N 314 TRP CZ3 C Y N 315 TRP CH2 C Y N 316 TRP OXT O N N 317 TRP H H N N 318 TRP H2 H N N 319 TRP HA H N N 320 TRP HB2 H N N 321 TRP HB3 H N N 322 TRP HD1 H N N 323 TRP HE1 H N N 324 TRP HE3 H N N 325 TRP HZ2 H N N 326 TRP HZ3 H N N 327 TRP HH2 H N N 328 TRP HXT H N N 329 TYR N N N N 330 TYR CA C N S 331 TYR C C N N 332 TYR O O N N 333 TYR CB C N N 334 TYR CG C Y N 335 TYR CD1 C Y N 336 TYR CD2 C Y N 337 TYR CE1 C Y N 338 TYR CE2 C Y N 339 TYR CZ C Y N 340 TYR OH O N N 341 TYR OXT O N N 342 TYR H H N N 343 TYR H2 H N N 344 TYR HA H N N 345 TYR HB2 H N N 346 TYR HB3 H N N 347 TYR HD1 H N N 348 TYR HD2 H N N 349 TYR HE1 H N N 350 TYR HE2 H N N 351 TYR HH H N N 352 TYR HXT H N N 353 VAL N N N N 354 VAL CA C N S 355 VAL C C N N 356 VAL O O N N 357 VAL CB C N N 358 VAL CG1 C N N 359 VAL CG2 C N N 360 VAL OXT O N N 361 VAL H H N N 362 VAL H2 H N N 363 VAL HA H N N 364 VAL HB H N N 365 VAL HG11 H N N 366 VAL HG12 H N N 367 VAL HG13 H N N 368 VAL HG21 H N N 369 VAL HG22 H N N 370 VAL HG23 H N N 371 VAL HXT H N N 372 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 MET N CA sing N N 184 MET N H sing N N 185 MET N H2 sing N N 186 MET CA C sing N N 187 MET CA CB sing N N 188 MET CA HA sing N N 189 MET C O doub N N 190 MET C OXT sing N N 191 MET CB CG sing N N 192 MET CB HB2 sing N N 193 MET CB HB3 sing N N 194 MET CG SD sing N N 195 MET CG HG2 sing N N 196 MET CG HG3 sing N N 197 MET SD CE sing N N 198 MET CE HE1 sing N N 199 MET CE HE2 sing N N 200 MET CE HE3 sing N N 201 MET OXT HXT sing N N 202 PEG C1 O1 sing N N 203 PEG C1 C2 sing N N 204 PEG C1 H11 sing N N 205 PEG C1 H12 sing N N 206 PEG O1 HO1 sing N N 207 PEG C2 O2 sing N N 208 PEG C2 H21 sing N N 209 PEG C2 H22 sing N N 210 PEG O2 C3 sing N N 211 PEG C3 C4 sing N N 212 PEG C3 H31 sing N N 213 PEG C3 H32 sing N N 214 PEG C4 O4 sing N N 215 PEG C4 H41 sing N N 216 PEG C4 H42 sing N N 217 PEG O4 HO4 sing N N 218 PHE N CA sing N N 219 PHE N H sing N N 220 PHE N H2 sing N N 221 PHE CA C sing N N 222 PHE CA CB sing N N 223 PHE CA HA sing N N 224 PHE C O doub N N 225 PHE C OXT sing N N 226 PHE CB CG sing N N 227 PHE CB HB2 sing N N 228 PHE CB HB3 sing N N 229 PHE CG CD1 doub Y N 230 PHE CG CD2 sing Y N 231 PHE CD1 CE1 sing Y N 232 PHE CD1 HD1 sing N N 233 PHE CD2 CE2 doub Y N 234 PHE CD2 HD2 sing N N 235 PHE CE1 CZ doub Y N 236 PHE CE1 HE1 sing N N 237 PHE CE2 CZ sing Y N 238 PHE CE2 HE2 sing N N 239 PHE CZ HZ sing N N 240 PHE OXT HXT sing N N 241 PRO N CA sing N N 242 PRO N CD sing N N 243 PRO N H sing N N 244 PRO CA C sing N N 245 PRO CA CB sing N N 246 PRO CA HA sing N N 247 PRO C O doub N N 248 PRO C OXT sing N N 249 PRO CB CG sing N N 250 PRO CB HB2 sing N N 251 PRO CB HB3 sing N N 252 PRO CG CD sing N N 253 PRO CG HG2 sing N N 254 PRO CG HG3 sing N N 255 PRO CD HD2 sing N N 256 PRO CD HD3 sing N N 257 PRO OXT HXT sing N N 258 SER N CA sing N N 259 SER N H sing N N 260 SER N H2 sing N N 261 SER CA C sing N N 262 SER CA CB sing N N 263 SER CA HA sing N N 264 SER C O doub N N 265 SER C OXT sing N N 266 SER CB OG sing N N 267 SER CB HB2 sing N N 268 SER CB HB3 sing N N 269 SER OG HG sing N N 270 SER OXT HXT sing N N 271 THR N CA sing N N 272 THR N H sing N N 273 THR N H2 sing N N 274 THR CA C sing N N 275 THR CA CB sing N N 276 THR CA HA sing N N 277 THR C O doub N N 278 THR C OXT sing N N 279 THR CB OG1 sing N N 280 THR CB CG2 sing N N 281 THR CB HB sing N N 282 THR OG1 HG1 sing N N 283 THR CG2 HG21 sing N N 284 THR CG2 HG22 sing N N 285 THR CG2 HG23 sing N N 286 THR OXT HXT sing N N 287 TRP N CA sing N N 288 TRP N H sing N N 289 TRP N H2 sing N N 290 TRP CA C sing N N 291 TRP CA CB sing N N 292 TRP CA HA sing N N 293 TRP C O doub N N 294 TRP C OXT sing N N 295 TRP CB CG sing N N 296 TRP CB HB2 sing N N 297 TRP CB HB3 sing N N 298 TRP CG CD1 doub Y N 299 TRP CG CD2 sing Y N 300 TRP CD1 NE1 sing Y N 301 TRP CD1 HD1 sing N N 302 TRP CD2 CE2 doub Y N 303 TRP CD2 CE3 sing Y N 304 TRP NE1 CE2 sing Y N 305 TRP NE1 HE1 sing N N 306 TRP CE2 CZ2 sing Y N 307 TRP CE3 CZ3 doub Y N 308 TRP CE3 HE3 sing N N 309 TRP CZ2 CH2 doub Y N 310 TRP CZ2 HZ2 sing N N 311 TRP CZ3 CH2 sing Y N 312 TRP CZ3 HZ3 sing N N 313 TRP CH2 HH2 sing N N 314 TRP OXT HXT sing N N 315 TYR N CA sing N N 316 TYR N H sing N N 317 TYR N H2 sing N N 318 TYR CA C sing N N 319 TYR CA CB sing N N 320 TYR CA HA sing N N 321 TYR C O doub N N 322 TYR C OXT sing N N 323 TYR CB CG sing N N 324 TYR CB HB2 sing N N 325 TYR CB HB3 sing N N 326 TYR CG CD1 doub Y N 327 TYR CG CD2 sing Y N 328 TYR CD1 CE1 sing Y N 329 TYR CD1 HD1 sing N N 330 TYR CD2 CE2 doub Y N 331 TYR CD2 HD2 sing N N 332 TYR CE1 CZ doub Y N 333 TYR CE1 HE1 sing N N 334 TYR CE2 CZ sing Y N 335 TYR CE2 HE2 sing N N 336 TYR CZ OH sing N N 337 TYR OH HH sing N N 338 TYR OXT HXT sing N N 339 VAL N CA sing N N 340 VAL N H sing N N 341 VAL N H2 sing N N 342 VAL CA C sing N N 343 VAL CA CB sing N N 344 VAL CA HA sing N N 345 VAL C O doub N N 346 VAL C OXT sing N N 347 VAL CB CG1 sing N N 348 VAL CB CG2 sing N N 349 VAL CB HB sing N N 350 VAL CG1 HG11 sing N N 351 VAL CG1 HG12 sing N N 352 VAL CG1 HG13 sing N N 353 VAL CG2 HG21 sing N N 354 VAL CG2 HG22 sing N N 355 VAL CG2 HG23 sing N N 356 VAL OXT HXT sing N N 357 # _atom_sites.entry_id 4MAK _atom_sites.fract_transf_matrix[1][1] 0.033280 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015149 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014291 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_