HEADER TRANSFERASE 28-AUG-13 4MFK TITLE THE CRYSTAL STRUCTURE OF ACYLTRANSFERASE IN COMPLEX WITH DECANOYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN TCP24; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACYLTRANSFERASE; COMPND 5 EC: 2.3.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOPLANES TEICHOMYCETICUS; SOURCE 3 ORGANISM_TAXID: 1867; SOURCE 4 GENE: TCP24; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GNAT, ACYLTRANSFERASE, ACYL-COA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.Y.LYU,Y.C.LIU,C.Y.CHANG,C.J.HUANG,T.L.LI REVDAT 3 08-NOV-23 4MFK 1 REMARK SEQADV REVDAT 2 10-SEP-14 4MFK 1 JRNL REVDAT 1 03-SEP-14 4MFK 0 JRNL AUTH S.Y.LYU,Y.C.LIU,C.Y.CHANG,C.J.HUANG,Y.H.CHIU,C.M.HUANG, JRNL AUTH 2 N.S.HSU,K.H.LIN,C.J.WU,M.D.TSAI,T.L.LI JRNL TITL MULTIPLE COMPLEXES OF LONG ALIPHATIC N-ACYLTRANSFERASES LEAD JRNL TITL 2 TO SYNTHESIS OF 2,6-DIACYLATED/2-ACYL-SUBSTITUTED JRNL TITL 3 GLYCOPEPTIDE ANTIBIOTICS, EFFECTIVELY KILLING JRNL TITL 4 VANCOMYCIN-RESISTANT ENTEROCOCCUS JRNL REF J.AM.CHEM.SOC. V. 136 10989 2014 JRNL REFN ISSN 0002-7863 JRNL PMID 25095906 JRNL DOI 10.1021/JA504125V REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.92000 REMARK 3 B22 (A**2) : -0.92000 REMARK 3 B33 (A**2) : 1.37000 REMARK 3 B12 (A**2) : -0.46000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.580 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2836 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3881 ; 1.393 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 5.035 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;37.001 ;21.929 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 429 ;13.148 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;19.063 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 397 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2241 ; 0.008 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4MFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : HORIZONTALLY FOCUSING SINGLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37919 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER FOR MR REMARK 200 STARTING MODEL: 4MFJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1MM MES, 0.2M AMMONIUM SULPHATE, REMARK 280 30%(V/V) PEG5000 MME, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.93400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.46700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.70050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 8.23350 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.16750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 248 OD1 ASP A 250 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 137 CE2 TRP A 137 CD2 0.076 REMARK 500 HIS A 192 CG HIS A 192 CD2 0.055 REMARK 500 TRP A 237 CE2 TRP A 237 CD2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 215 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 159 101.56 -162.36 REMARK 500 GLN A 295 30.11 -140.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MFK A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MFJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN, LIGAND FREE REMARK 900 RELATED ID: 4MFL RELATED DB: PDB REMARK 900 RELATED ID: 4MFP RELATED DB: PDB REMARK 900 RELATED ID: 4MFQ RELATED DB: PDB REMARK 900 RELATED ID: 4MFS RELATED DB: PDB REMARK 900 RELATED ID: 4MFT RELATED DB: PDB REMARK 900 RELATED ID: 4MFW RELATED DB: PDB REMARK 900 RELATED ID: 4MFX RELATED DB: PDB REMARK 900 RELATED ID: 4MFY RELATED DB: PDB REMARK 900 RELATED ID: 4MG0 RELATED DB: PDB REMARK 900 RELATED ID: 4MG1 RELATED DB: PDB DBREF 4MFK A 1 323 UNP Q70AY4 Q70AY4_ACTTI 1 323 SEQADV 4MFK MET A -21 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK GLY A -20 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK SER A -19 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK SER A -18 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -17 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -16 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -15 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -14 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -13 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -12 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK SER A -11 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK SER A -10 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK GLY A -9 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK LEU A -8 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK VAL A -7 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK PRO A -6 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK ARG A -5 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK GLY A -4 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK SER A -3 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK HIS A -2 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK MET A -1 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK MET A 0 UNP Q70AY4 EXPRESSION TAG SEQADV 4MFK ALA A 196 UNP Q70AY4 HIS 196 ENGINEERED MUTATION SEQRES 1 A 345 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 345 LEU VAL PRO ARG GLY SER HIS MET MET MET ASP PRO GLU SEQRES 3 A 345 THR VAL ARG ILE ALA LEU GLY LEU GLU GLU ARG THR ALA SEQRES 4 A 345 ALA TRP LEU THR GLU LEU ASP GLU LEU GLY PRO PRO ALA SEQRES 5 A 345 GLU PRO VAL ARG LEU PRO ARG GLY GLU GLU ALA ARG ASP SEQRES 6 A 345 LEU LEU ARG ARG LEU GLU VAL PRO GLU LEU ASP ALA GLU SEQRES 7 A 345 GLU ILE VAL ALA ALA ALA PRO ASP PRO ASP ARG ASP PRO SEQRES 8 A 345 ALA LEU TRP TRP LEU LEU GLU ARG THR HIS HIS ALA ILE SEQRES 9 A 345 VAL ARG HIS MET GLY ASP HIS ARG ALA LYS PRO ARG GLY SEQRES 10 A 345 GLY PRO PRO LEU PRO TYR GLU GLY GLY ALA ALA ALA ARG SEQRES 11 A 345 TYR PHE HIS VAL TYR VAL PHE LEU ALA THR VAL PRO ALA SEQRES 12 A 345 VAL ARG ARG PHE HIS ALA GLU ARG GLY ILE PRO ASP GLU SEQRES 13 A 345 VAL GLY TRP GLU THR LEU THR GLN LEU GLY GLU LEU VAL SEQRES 14 A 345 ALA ILE HIS ARG ARG LYS TYR GLY GLN GLY GLY MET ASN SEQRES 15 A 345 MET GLN TRP TRP THR THR TYR HIS LEU ARG GLY ILE LEU SEQRES 16 A 345 TYR ARG LEU GLY ARG LEU GLN PHE SER LEU ALA THR GLY SEQRES 17 A 345 LYS ASP GLY THR PRO HIS LEU GLY LEU ALA VAL PRO GLU SEQRES 18 A 345 TRP GLY GLY PRO LEU LEU PRO LYS ALA TYR ASP GLU SER SEQRES 19 A 345 LEU HIS ARG ALA ARG PRO PHE PHE ASP ARG HIS PHE PRO SEQRES 20 A 345 GLU HIS GLY ALA ARG VAL ALA TRP GLY SER SER TRP MET SEQRES 21 A 345 LEU ASP PRO GLN LEU GLU GLU TYR LEU THR GLU ASP SER SEQRES 22 A 345 ASN ILE ILE GLN LEU ALA ARG PHE TRP THR LEU THR ASP SEQRES 23 A 345 SER ALA PRO GLU PRO GLY ASN ALA ASP GLY ASP SER SER SEQRES 24 A 345 ILE LEU GLU PHE VAL PHE ARG TYR ASN GLY GLN PRO LEU SEQRES 25 A 345 ASP GLU LEU PRO GLN ARG SER SER LEU GLU ARG ALA VAL SEQRES 26 A 345 ILE ALA HIS LEU LYS ALA GLY ARG HIS TRP HIS MET ARG SEQRES 27 A 345 THR GLY PHE VAL LYS LEU PRO HET MFK A 401 59 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HETNAM MFK DECANOYL-COA HETNAM SO4 SULFATE ION FORMUL 2 MFK C31 H54 N7 O17 P3 S FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *464(H2 O) HELIX 1 1 ASP A 2 GLY A 11 1 10 HELIX 2 2 GLU A 13 ARG A 15 5 3 HELIX 3 3 THR A 16 GLY A 27 1 12 HELIX 4 4 ARG A 37 LEU A 48 1 12 HELIX 5 5 PRO A 51 ALA A 62 1 12 HELIX 6 6 ASP A 68 ARG A 84 1 17 HELIX 7 7 PRO A 100 GLU A 102 5 3 HELIX 8 8 GLY A 103 TYR A 109 1 7 HELIX 9 9 TYR A 109 ARG A 129 1 21 HELIX 10 10 PRO A 132 THR A 141 1 10 HELIX 11 11 THR A 141 GLY A 155 1 15 HELIX 12 12 MET A 161 ARG A 170 1 10 HELIX 13 13 LEU A 205 PHE A 224 1 20 HELIX 14 14 TRP A 237 TYR A 246 5 10 HELIX 15 15 SER A 251 ARG A 258 1 8 HELIX 16 16 GLY A 274 ARG A 284 1 11 HELIX 17 17 PRO A 289 LEU A 293 5 5 HELIX 18 18 SER A 297 ALA A 309 1 13 SHEET 1 A 6 LEU A 173 LEU A 176 0 SHEET 2 A 6 LEU A 179 THR A 185 -1 O LEU A 179 N LEU A 176 SHEET 3 A 6 PRO A 191 ALA A 196 -1 O ALA A 196 N GLN A 180 SHEET 4 A 6 VAL A 231 SER A 236 1 O TRP A 233 N LEU A 195 SHEET 5 A 6 ARG A 316 LYS A 321 -1 O VAL A 320 N ALA A 232 SHEET 6 A 6 THR A 261 LEU A 262 -1 N THR A 261 O PHE A 319 SITE 1 AC1 33 ARG A 178 LEU A 195 ALA A 196 VAL A 197 SITE 2 AC1 33 GLU A 199 PRO A 203 LEU A 204 GLY A 234 SITE 3 AC1 33 SER A 235 SER A 236 TRP A 237 MET A 238 SITE 4 AC1 33 SER A 251 ASN A 252 ILE A 253 TRP A 260 SITE 5 AC1 33 PHE A 281 VAL A 282 SER A 297 SER A 298 SITE 6 AC1 33 LEU A 299 GLU A 300 HOH A 538 HOH A 539 SITE 7 AC1 33 HOH A 566 HOH A 606 HOH A 615 HOH A 695 SITE 8 AC1 33 HOH A 704 HOH A 877 HOH A 931 HOH A 934 SITE 9 AC1 33 HOH A 954 SITE 1 AC2 5 ALA A 91 LYS A 92 ARG A 94 HOH A 620 SITE 2 AC2 5 HOH A 838 SITE 1 AC3 3 ARG A 15 THR A 16 HOH A 668 SITE 1 AC4 6 GLY A 186 LYS A 187 ASP A 188 ARG A 222 SITE 2 AC4 6 TRP A 233 HOH A 529 CRYST1 133.542 133.542 49.401 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007488 0.004323 0.000000 0.00000 SCALE2 0.000000 0.008647 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020243 0.00000