HEADER HYDROLASE 28-AUG-13 4MG3 TITLE CRYSTAL STRUCTURAL ANALYSIS OF 2A PROTEASE FROM COXSACKIEVIRUS A16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASE 2A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 863-1007; COMPND 5 EC: 3.4.22.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS A16; SOURCE 3 ORGANISM_TAXID: 231417; SOURCE 4 STRAIN: TAINAN/5079/98; SOURCE 5 GENE: 2A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS BETA BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.SUN,X.WANG,M.DANG,S.YUAN REVDAT 3 30-OCT-24 4MG3 1 REMARK LINK REVDAT 2 15-NOV-17 4MG3 1 REMARK REVDAT 1 26-MAR-14 4MG3 0 JRNL AUTH Y.SUN,X.WANG,S.YUAN,M.DANG,X.LI,X.C.ZHANG,Z.RAO JRNL TITL AN OPEN CONFORMATION DETERMINED BY A STRUCTURAL SWITCH FOR JRNL TITL 2 2A PROTEASE FROM COXSACKIEVIRUS A16. JRNL REF PROTEIN CELL V. 4 782 2013 JRNL REFN ISSN 1674-800X JRNL PMID 24026848 JRNL DOI 10.1007/S13238-013-3914-Z REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 35767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1789 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4765 - 4.2266 0.98 2722 127 0.1641 0.1693 REMARK 3 2 4.2266 - 3.3556 1.00 2647 140 0.1548 0.1697 REMARK 3 3 3.3556 - 2.9317 1.00 2649 139 0.1855 0.2050 REMARK 3 4 2.9317 - 2.6637 1.00 2594 148 0.1924 0.2220 REMARK 3 5 2.6637 - 2.4729 1.00 2628 131 0.1815 0.2232 REMARK 3 6 2.4729 - 2.3271 1.00 2600 142 0.1756 0.2084 REMARK 3 7 2.3271 - 2.2106 1.00 2613 132 0.1764 0.2399 REMARK 3 8 2.2106 - 2.1144 1.00 2574 163 0.1725 0.2079 REMARK 3 9 2.1144 - 2.0330 1.00 2602 125 0.1737 0.2036 REMARK 3 10 2.0330 - 1.9628 1.00 2585 154 0.1722 0.2370 REMARK 3 11 1.9628 - 1.9015 1.00 2589 122 0.1767 0.2605 REMARK 3 12 1.9015 - 1.8471 1.00 2599 123 0.1805 0.2113 REMARK 3 13 1.8471 - 1.7985 0.99 2576 143 0.2030 0.2803 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 36.05 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.28040 REMARK 3 B22 (A**2) : -4.28040 REMARK 3 B33 (A**2) : 8.56090 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2294 REMARK 3 ANGLE : 1.268 3112 REMARK 3 CHIRALITY : 0.122 334 REMARK 3 PLANARITY : 0.009 401 REMARK 3 DIHEDRAL : 13.013 813 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 4:44) REMARK 3 ORIGIN FOR THE GROUP (A): 68.0159 -9.7102 13.4472 REMARK 3 T TENSOR REMARK 3 T11: 0.1118 T22: 0.1361 REMARK 3 T33: 0.1722 T12: -0.0077 REMARK 3 T13: -0.0191 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 1.0873 L22: 0.7890 REMARK 3 L33: 0.9171 L12: -0.9291 REMARK 3 L13: 0.2493 L23: -0.1176 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: 0.0643 S13: 0.2219 REMARK 3 S21: -0.0822 S22: 0.0095 S23: -0.0654 REMARK 3 S31: -0.0053 S32: 0.1088 S33: 0.0169 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 45:75) REMARK 3 ORIGIN FOR THE GROUP (A): 61.5879 4.4271 14.6648 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.1604 REMARK 3 T33: 0.2181 T12: -0.0262 REMARK 3 T13: 0.0098 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 1.5810 L22: 1.0073 REMARK 3 L33: 0.5392 L12: -0.2611 REMARK 3 L13: -0.7282 L23: -0.3468 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: -0.1907 S13: 0.2771 REMARK 3 S21: -0.0412 S22: 0.0597 S23: -0.3757 REMARK 3 S31: -0.1080 S32: 0.0338 S33: -0.0626 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 76:97) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1233 -11.1310 15.6354 REMARK 3 T TENSOR REMARK 3 T11: 0.1430 T22: 0.2294 REMARK 3 T33: 0.2198 T12: -0.0297 REMARK 3 T13: 0.0254 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.2595 L22: 0.4898 REMARK 3 L33: 0.5941 L12: -0.0751 REMARK 3 L13: -0.1931 L23: -0.2242 REMARK 3 S TENSOR REMARK 3 S11: -0.1490 S12: 0.1303 S13: -0.4063 REMARK 3 S21: -0.0010 S22: 0.1739 S23: 0.1359 REMARK 3 S31: 0.0694 S32: -0.1031 S33: -0.0099 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 98:136) REMARK 3 ORIGIN FOR THE GROUP (A): 55.5564 -0.2456 13.8579 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.1410 REMARK 3 T33: 0.1378 T12: -0.0087 REMARK 3 T13: -0.0116 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.0797 L22: 0.8909 REMARK 3 L33: 0.4870 L12: -0.9043 REMARK 3 L13: -0.5775 L23: 0.3030 REMARK 3 S TENSOR REMARK 3 S11: 0.0443 S12: 0.0363 S13: 0.1234 REMARK 3 S21: -0.0443 S22: 0.0715 S23: -0.0668 REMARK 3 S31: -0.0853 S32: -0.0180 S33: -0.0700 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 137:145) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4015 -5.1113 25.5751 REMARK 3 T TENSOR REMARK 3 T11: 0.2536 T22: 0.3632 REMARK 3 T33: 0.2203 T12: 0.0595 REMARK 3 T13: -0.1137 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 0.3185 L22: 0.1285 REMARK 3 L33: 0.0324 L12: 0.1715 REMARK 3 L13: 0.0951 L23: 0.0395 REMARK 3 S TENSOR REMARK 3 S11: 0.0372 S12: -0.7586 S13: -0.1162 REMARK 3 S21: 0.4573 S22: 0.2106 S23: -0.2787 REMARK 3 S31: 0.3430 S32: -0.1860 S33: -0.0585 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 1:44) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2018 1.4322 18.1056 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.1424 REMARK 3 T33: 0.3007 T12: 0.0552 REMARK 3 T13: -0.0277 T23: -0.0832 REMARK 3 L TENSOR REMARK 3 L11: 0.5883 L22: 0.5104 REMARK 3 L33: 0.3207 L12: -0.2844 REMARK 3 L13: -0.1129 L23: -0.0391 REMARK 3 S TENSOR REMARK 3 S11: 0.0437 S12: -0.1424 S13: 0.2903 REMARK 3 S21: -0.0165 S22: -0.1444 S23: 0.4245 REMARK 3 S31: -0.1351 S32: -0.2452 S33: 0.0417 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 45:106) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5289 2.7514 17.7765 REMARK 3 T TENSOR REMARK 3 T11: 0.1464 T22: 0.1203 REMARK 3 T33: 0.0814 T12: 0.0267 REMARK 3 T13: -0.0099 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.1305 L22: 1.3923 REMARK 3 L33: 0.5854 L12: 0.5941 REMARK 3 L13: -0.2352 L23: 0.3992 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: -0.0021 S13: 0.0881 REMARK 3 S21: 0.0255 S22: -0.0795 S23: 0.0821 REMARK 3 S31: -0.1526 S32: 0.0724 S33: 0.0142 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 107:136) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3255 4.8600 18.3084 REMARK 3 T TENSOR REMARK 3 T11: 0.1813 T22: 0.1316 REMARK 3 T33: 0.1107 T12: 0.0189 REMARK 3 T13: -0.0108 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.8487 L22: 0.7569 REMARK 3 L33: 0.4265 L12: 0.2264 REMARK 3 L13: -0.1307 L23: 0.1401 REMARK 3 S TENSOR REMARK 3 S11: 0.0497 S12: -0.0192 S13: 0.0261 REMARK 3 S21: -0.0471 S22: -0.1323 S23: -0.0811 REMARK 3 S31: -0.1353 S32: 0.0458 S33: 0.0381 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 137:145) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3478 5.9899 6.8415 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.2398 REMARK 3 T33: 0.2273 T12: 0.0697 REMARK 3 T13: -0.1266 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 1.4668 L22: 0.1066 REMARK 3 L33: 0.5739 L12: -0.3946 REMARK 3 L13: 0.6657 L23: -0.1808 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: 0.2897 S13: 0.2923 REMARK 3 S21: -0.4327 S22: -0.0811 S23: 0.2542 REMARK 3 S31: -0.0450 S32: 0.0520 S33: 0.0237 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MG3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35773 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0, DM 6.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MGCL2, 0.1M HEPES-NA (PH 7.5), REMARK 280 18% (W/V) PEG 400, HANGING DROP, TEMPERATURE 289K, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.63550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.23442 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 64.63800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.63550 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.23442 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 64.63800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.63550 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.23442 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 64.63800 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.63550 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.23442 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 64.63800 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.63550 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.23442 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.63800 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.63550 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.23442 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 64.63800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.46884 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 129.27600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.46884 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 129.27600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.46884 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 129.27600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.46884 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 129.27600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.46884 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 129.27600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.46884 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 129.27600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 312 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 349 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 LYS A 2 REMARK 465 PHE A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 326 O HOH A 330 2.19 REMARK 500 OD1 ASN A 30 O HOH A 326 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 326 O HOH B 308 3655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 125 -52.06 -127.40 REMARK 500 GLN B 5 -124.80 51.36 REMARK 500 SER B 125 -52.05 -127.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 56 SG REMARK 620 2 CYS A 58 SG 107.3 REMARK 620 3 CYS A 116 SG 106.3 116.5 REMARK 620 4 HIS A 118 ND1 106.0 101.6 118.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 56 SG REMARK 620 2 CYS B 58 SG 106.9 REMARK 620 3 CYS B 116 SG 105.3 117.9 REMARK 620 4 HIS B 118 ND1 107.8 100.9 117.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 DBREF 4MG3 A 1 145 UNP Q9QF31 POLG_CX16T 863 1007 DBREF 4MG3 B 1 145 UNP Q9QF31 POLG_CX16T 863 1007 SEQRES 1 A 145 GLY LYS PHE GLY GLN GLN SER GLY ALA ILE TYR VAL GLY SEQRES 2 A 145 ASN TYR ARG VAL VAL ASN ARG HIS LEU ALA THR HIS ASN SEQRES 3 A 145 ASP TRP ALA ASN LEU VAL TRP GLU ASP SER SER ARG ASP SEQRES 4 A 145 LEU LEU VAL SER SER THR THR ALA GLN GLY CYS ASP THR SEQRES 5 A 145 ILE ALA ARG CYS ASN CYS GLN THR GLY VAL TYR TYR CYS SEQRES 6 A 145 SER SER LYS ARG LYS HIS TYR PRO VAL SER PHE THR LYS SEQRES 7 A 145 PRO SER LEU ILE PHE VAL GLU ALA SER GLU TYR TYR PRO SEQRES 8 A 145 ALA ARG TYR GLN SER HIS LEU MET LEU ALA VAL GLY HIS SEQRES 9 A 145 SER GLU PRO GLY ASP CYS GLY GLY ILE LEU ARG CYS GLN SEQRES 10 A 145 HIS GLY VAL VAL GLY ILE VAL SER THR GLY GLY ASN GLY SEQRES 11 A 145 LEU VAL GLY PHE ALA ASP VAL ARG ASP LEU LEU TRP LEU SEQRES 12 A 145 ASP GLU SEQRES 1 B 145 GLY LYS PHE GLY GLN GLN SER GLY ALA ILE TYR VAL GLY SEQRES 2 B 145 ASN TYR ARG VAL VAL ASN ARG HIS LEU ALA THR HIS ASN SEQRES 3 B 145 ASP TRP ALA ASN LEU VAL TRP GLU ASP SER SER ARG ASP SEQRES 4 B 145 LEU LEU VAL SER SER THR THR ALA GLN GLY CYS ASP THR SEQRES 5 B 145 ILE ALA ARG CYS ASN CYS GLN THR GLY VAL TYR TYR CYS SEQRES 6 B 145 SER SER LYS ARG LYS HIS TYR PRO VAL SER PHE THR LYS SEQRES 7 B 145 PRO SER LEU ILE PHE VAL GLU ALA SER GLU TYR TYR PRO SEQRES 8 B 145 ALA ARG TYR GLN SER HIS LEU MET LEU ALA VAL GLY HIS SEQRES 9 B 145 SER GLU PRO GLY ASP CYS GLY GLY ILE LEU ARG CYS GLN SEQRES 10 B 145 HIS GLY VAL VAL GLY ILE VAL SER THR GLY GLY ASN GLY SEQRES 11 B 145 LEU VAL GLY PHE ALA ASP VAL ARG ASP LEU LEU TRP LEU SEQRES 12 B 145 ASP GLU HET ZN A 201 1 HET 1PE A 202 16 HET TRS A 203 8 HET ZN B 201 1 HETNAM ZN ZINC ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN 1PE PEG400 HETSYN TRS TRIS BUFFER FORMUL 3 ZN 2(ZN 2+) FORMUL 4 1PE C10 H22 O6 FORMUL 5 TRS C4 H12 N O3 1+ FORMUL 7 HOH *296(H2 O) HELIX 1 1 HIS A 21 ALA A 23 5 3 HELIX 2 2 THR A 24 ASN A 30 1 7 HELIX 3 3 SER A 36 ARG A 38 5 3 HELIX 4 4 GLU A 106 CYS A 110 5 5 HELIX 5 5 LEU A 140 ASP A 144 5 5 HELIX 6 6 HIS B 21 ALA B 23 5 3 HELIX 7 7 THR B 24 ASN B 30 1 7 HELIX 8 8 SER B 66 ARG B 69 5 4 HELIX 9 9 GLU B 106 CYS B 110 5 5 HELIX 10 10 LEU B 140 GLU B 145 5 6 SHEET 1 A 3 LEU A 31 ASP A 35 0 SHEET 2 A 3 LEU A 40 CYS A 50 -1 O VAL A 42 N TRP A 33 SHEET 3 A 3 ILE A 10 ASN A 19 -1 O GLY A 13 N GLY A 49 SHEET 1 B 7 LYS A 70 SER A 75 0 SHEET 2 B 7 THR A 60 CYS A 65 -1 N CYS A 65 O LYS A 70 SHEET 3 B 7 ILE A 113 CYS A 116 -1 O ARG A 115 N VAL A 62 SHEET 4 B 7 GLY A 119 GLY A 128 -1 O VAL A 121 N LEU A 114 SHEET 5 B 7 LEU A 131 ASP A 136 -1 O GLY A 133 N SER A 125 SHEET 6 B 7 ARG A 93 VAL A 102 -1 N MET A 99 O PHE A 134 SHEET 7 B 7 SER A 80 VAL A 84 -1 N VAL A 84 O ARG A 93 SHEET 1 C 3 LEU B 31 ASP B 35 0 SHEET 2 C 3 LEU B 40 CYS B 50 -1 O VAL B 42 N TRP B 33 SHEET 3 C 3 ILE B 10 ASN B 19 -1 O ASN B 14 N THR B 45 SHEET 1 D 7 LYS B 70 SER B 75 0 SHEET 2 D 7 THR B 60 CYS B 65 -1 N CYS B 65 O LYS B 70 SHEET 3 D 7 ILE B 113 CYS B 116 -1 O ARG B 115 N VAL B 62 SHEET 4 D 7 GLY B 119 GLY B 128 -1 O VAL B 121 N LEU B 114 SHEET 5 D 7 LEU B 131 ASP B 136 -1 O GLY B 133 N SER B 125 SHEET 6 D 7 ARG B 93 VAL B 102 -1 N MET B 99 O PHE B 134 SHEET 7 D 7 SER B 80 VAL B 84 -1 N VAL B 84 O ARG B 93 SSBOND 1 CYS A 50 CYS B 50 1555 2655 2.05 LINK SG CYS A 56 ZN ZN A 201 1555 1555 2.21 LINK SG CYS A 58 ZN ZN A 201 1555 1555 2.41 LINK SG CYS A 116 ZN ZN A 201 1555 1555 2.37 LINK ND1 HIS A 118 ZN ZN A 201 1555 1555 2.16 LINK SG CYS B 56 ZN ZN B 201 1555 1555 2.32 LINK SG CYS B 58 ZN ZN B 201 1555 1555 2.36 LINK SG CYS B 116 ZN ZN B 201 1555 1555 2.34 LINK ND1 HIS B 118 ZN ZN B 201 1555 1555 2.16 CISPEP 1 GLY B 1 LYS B 2 0 12.77 SITE 1 AC1 4 CYS A 56 CYS A 58 CYS A 116 HIS A 118 SITE 1 AC2 6 TRP A 28 PHE A 83 HOH A 308 HOH A 340 SITE 2 AC2 6 PHE B 83 TYR B 94 SITE 1 AC3 8 PHE A 83 VAL A 84 LEU A 100 THR A 126 SITE 2 AC3 8 GLY A 127 GLY A 128 ASN A 129 HOH A 387 SITE 1 AC4 4 CYS B 56 CYS B 58 CYS B 116 HIS B 118 CRYST1 101.271 101.271 193.914 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009874 0.005701 0.000000 0.00000 SCALE2 0.000000 0.011402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005157 0.00000