data_4MO7 # _entry.id 4MO7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4MO7 RCSB RCSB082157 WWPDB D_1000082157 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MO7 _pdbx_database_status.recvd_initial_deposition_date 2013-09-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, L.H.' 1 'Chen, H.' 2 'Li, H.M.' 3 # _citation.id primary _citation.title ;Pfit is a structurally novel Crohn's disease-associated superantigen. ; _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 9 _citation.page_first e1003837 _citation.page_last e1003837 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24385909 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1003837 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liu, L.' 1 primary 'Chen, H.' 2 primary 'Brecher, M.B.' 3 primary 'Li, Z.' 4 primary 'Wei, B.' 5 primary 'Nandi, B.' 6 primary 'Zhang, J.' 7 primary 'Ling, H.' 8 primary 'Winslow, G.' 9 primary 'Braun, J.' 10 primary 'Li, H.' 11 # _cell.entry_id 4MO7 _cell.length_a 37.226 _cell.length_b 93.661 _cell.length_c 53.557 _cell.angle_alpha 90.00 _cell.angle_beta 109.82 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MO7 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator I2' 23637.109 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 4 water nat water 18.015 111 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLGSMDEHKALGVMRTMVDSGQLTDPESARGKLLQTAAHLFRNKGFERTTVRDLASAVGIQSGSIFHHFKSKDEILRAV MEETIHYNTAMMRASLEEASTVRERVLALIR(CME)ELQSIMGGSGEAMAVLVYEWRSLSAEGQAHVLALRDVYEQIWLQ VLGEAKAAGYIRGDVFITRRFLTGALSWTTTWFRAQGSLTLEELAEEALLMVLKSD ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSMDEHKALGVMRTMVDSGQLTDPESARGKLLQTAAHLFRNKGFERTTVRDLASAVGIQSGSIFHHFKSKDEILRAV MEETIHYNTAMMRASLEEASTVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSAEGQAHVLALRDVYEQIWLQVLGE AKAAGYIRGDVFITRRFLTGALSWTTTWFRAQGSLTLEELAEEALLMVLKSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MET n 1 7 ASP n 1 8 GLU n 1 9 HIS n 1 10 LYS n 1 11 ALA n 1 12 LEU n 1 13 GLY n 1 14 VAL n 1 15 MET n 1 16 ARG n 1 17 THR n 1 18 MET n 1 19 VAL n 1 20 ASP n 1 21 SER n 1 22 GLY n 1 23 GLN n 1 24 LEU n 1 25 THR n 1 26 ASP n 1 27 PRO n 1 28 GLU n 1 29 SER n 1 30 ALA n 1 31 ARG n 1 32 GLY n 1 33 LYS n 1 34 LEU n 1 35 LEU n 1 36 GLN n 1 37 THR n 1 38 ALA n 1 39 ALA n 1 40 HIS n 1 41 LEU n 1 42 PHE n 1 43 ARG n 1 44 ASN n 1 45 LYS n 1 46 GLY n 1 47 PHE n 1 48 GLU n 1 49 ARG n 1 50 THR n 1 51 THR n 1 52 VAL n 1 53 ARG n 1 54 ASP n 1 55 LEU n 1 56 ALA n 1 57 SER n 1 58 ALA n 1 59 VAL n 1 60 GLY n 1 61 ILE n 1 62 GLN n 1 63 SER n 1 64 GLY n 1 65 SER n 1 66 ILE n 1 67 PHE n 1 68 HIS n 1 69 HIS n 1 70 PHE n 1 71 LYS n 1 72 SER n 1 73 LYS n 1 74 ASP n 1 75 GLU n 1 76 ILE n 1 77 LEU n 1 78 ARG n 1 79 ALA n 1 80 VAL n 1 81 MET n 1 82 GLU n 1 83 GLU n 1 84 THR n 1 85 ILE n 1 86 HIS n 1 87 TYR n 1 88 ASN n 1 89 THR n 1 90 ALA n 1 91 MET n 1 92 MET n 1 93 ARG n 1 94 ALA n 1 95 SER n 1 96 LEU n 1 97 GLU n 1 98 GLU n 1 99 ALA n 1 100 SER n 1 101 THR n 1 102 VAL n 1 103 ARG n 1 104 GLU n 1 105 ARG n 1 106 VAL n 1 107 LEU n 1 108 ALA n 1 109 LEU n 1 110 ILE n 1 111 ARG n 1 112 CME n 1 113 GLU n 1 114 LEU n 1 115 GLN n 1 116 SER n 1 117 ILE n 1 118 MET n 1 119 GLY n 1 120 GLY n 1 121 SER n 1 122 GLY n 1 123 GLU n 1 124 ALA n 1 125 MET n 1 126 ALA n 1 127 VAL n 1 128 LEU n 1 129 VAL n 1 130 TYR n 1 131 GLU n 1 132 TRP n 1 133 ARG n 1 134 SER n 1 135 LEU n 1 136 SER n 1 137 ALA n 1 138 GLU n 1 139 GLY n 1 140 GLN n 1 141 ALA n 1 142 HIS n 1 143 VAL n 1 144 LEU n 1 145 ALA n 1 146 LEU n 1 147 ARG n 1 148 ASP n 1 149 VAL n 1 150 TYR n 1 151 GLU n 1 152 GLN n 1 153 ILE n 1 154 TRP n 1 155 LEU n 1 156 GLN n 1 157 VAL n 1 158 LEU n 1 159 GLY n 1 160 GLU n 1 161 ALA n 1 162 LYS n 1 163 ALA n 1 164 ALA n 1 165 GLY n 1 166 TYR n 1 167 ILE n 1 168 ARG n 1 169 GLY n 1 170 ASP n 1 171 VAL n 1 172 PHE n 1 173 ILE n 1 174 THR n 1 175 ARG n 1 176 ARG n 1 177 PHE n 1 178 LEU n 1 179 THR n 1 180 GLY n 1 181 ALA n 1 182 LEU n 1 183 SER n 1 184 TRP n 1 185 THR n 1 186 THR n 1 187 THR n 1 188 TRP n 1 189 PHE n 1 190 ARG n 1 191 ALA n 1 192 GLN n 1 193 GLY n 1 194 SER n 1 195 LEU n 1 196 THR n 1 197 LEU n 1 198 GLU n 1 199 GLU n 1 200 LEU n 1 201 ALA n 1 202 GLU n 1 203 GLU n 1 204 ALA n 1 205 LEU n 1 206 LEU n 1 207 MET n 1 208 VAL n 1 209 LEU n 1 210 LYS n 1 211 SER n 1 212 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pfiT, PflA506_3695' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas fluorescens A506' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1037911 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code I2BPL4_PSEFL _struct_ref.pdbx_db_accession I2BPL4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDEHKALGVMRTMVDSGQLTDPESARGKLLQTAAHLFRNKGFERTTVRDLASAVGIQSGSIFHHFKSKDEILRAVMEETI HYNTAMMRASLEEASTVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSAEGQAHVLALRDVYEQIWLQVLGEAKAAG YIRGDVFITRRFLTGALSWTTTWFRAQGSLTLEELAEEALLMVLKSD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MO7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 212 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession I2BPL4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -8 _struct_ref_seq.pdbx_auth_seq_align_end 198 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MO7 GLY A 1 ? UNP I2BPL4 ? ? 'EXPRESSION TAG' -13 1 1 4MO7 PRO A 2 ? UNP I2BPL4 ? ? 'EXPRESSION TAG' -12 2 1 4MO7 LEU A 3 ? UNP I2BPL4 ? ? 'EXPRESSION TAG' -11 3 1 4MO7 GLY A 4 ? UNP I2BPL4 ? ? 'EXPRESSION TAG' -10 4 1 4MO7 SER A 5 ? UNP I2BPL4 ? ? 'EXPRESSION TAG' -9 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CME 'L-peptide linking' n 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' ? 'C5 H11 N O3 S2' 197.276 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4MO7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_percent_sol 33.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details ;4-8% PEG 3350, 0.1 M Tris, 0.2 M ammonium acetate, 5 mM MgCl2, 5 mM DTT, 5% isopropanol, and 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-02-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirror _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04023 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.04023 # _reflns.entry_id 4MO7 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.7 _reflns.number_obs 18843 _reflns.number_all 57293 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 30.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs .556 _reflns_shell.pdbx_Rsym_value .556 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1851 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4MO7 _refine.ls_number_reflns_obs 18840 _refine.ls_number_reflns_all 18840 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.192 _refine.ls_d_res_high 1.701 _refine.ls_percent_reflns_obs 99.32 _refine.ls_R_factor_obs 0.1908 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1886 _refine.ls_R_factor_R_free 0.2341 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.98 _refine.ls_number_reflns_R_free 938 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.3004 _refine.aniso_B[2][2] -0.3717 _refine.aniso_B[3][3] 1.6721 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -1.3445 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.404 _refine.solvent_model_param_bsol 61.804 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.27 _refine.pdbx_overall_phase_error 24.75 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1482 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 1598 _refine_hist.d_res_high 1.701 _refine_hist.d_res_low 25.192 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.016 ? ? 1568 ? 'X-RAY DIFFRACTION' f_angle_d 1.572 ? ? 2121 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.408 ? ? 581 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.105 ? ? 239 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 273 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7006 1.7902 2505 0.3054 97.00 0.3851 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.7902 1.9024 2545 0.2441 100.00 0.3442 . . 130 . . . . 'X-RAY DIFFRACTION' . 1.9024 2.0492 2559 0.2084 100.00 0.2450 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.0492 2.2553 2565 0.1811 100.00 0.2367 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.2553 2.5813 2558 0.1705 100.00 0.2304 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.5813 3.2511 2580 0.1731 100.00 0.2070 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.2511 25.1943 2590 0.1806 99.00 0.2140 . . 131 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4MO7 _struct.title 'Crystal structure of superantigen PfiT' _struct.pdbx_descriptor 'Transcriptional regulator I2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MO7 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TetR, Superantigen, Transcription' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? GLY A 46 ? SER A 15 GLY A 32 1 ? 18 HELX_P HELX_P2 2 THR A 51 ? GLY A 60 ? THR A 37 GLY A 46 1 ? 10 HELX_P HELX_P3 3 GLN A 62 ? HIS A 69 ? GLN A 48 HIS A 55 5 ? 8 HELX_P HELX_P4 4 SER A 72 ? GLU A 98 ? SER A 58 GLU A 84 1 ? 27 HELX_P HELX_P5 5 THR A 101 ? MET A 118 ? THR A 87 MET A 104 1 ? 18 HELX_P HELX_P6 6 SER A 121 ? GLU A 131 ? SER A 107 GLU A 117 1 ? 11 HELX_P HELX_P7 7 TRP A 132 ? LEU A 135 ? TRP A 118 LEU A 121 5 ? 4 HELX_P HELX_P8 8 SER A 136 ? ALA A 164 ? SER A 122 ALA A 150 1 ? 29 HELX_P HELX_P9 9 ASP A 170 ? TRP A 184 ? ASP A 156 TRP A 170 1 ? 15 HELX_P HELX_P10 10 THR A 185 ? THR A 187 ? THR A 171 THR A 173 5 ? 3 HELX_P HELX_P11 11 TRP A 188 ? GLY A 193 ? TRP A 174 GLY A 179 1 ? 6 HELX_P HELX_P12 12 THR A 196 ? LEU A 209 ? THR A 182 LEU A 195 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 111 C ? ? ? 1_555 A CME 112 N ? ? A ARG 97 A CME 98 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale ? ? A CME 112 C ? ? ? 1_555 A GLU 113 N ? ? A CME 98 A GLU 99 1_555 ? ? ? ? ? ? ? 1.336 ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 387 1_555 ? ? ? ? ? ? ? 2.646 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 411 1_555 ? ? ? ? ? ? ? 2.948 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE BME A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 40 ? HIS A 26 . ? 1_555 ? 2 AC1 3 HOH D . ? HOH A 387 . ? 1_555 ? 3 AC1 3 HOH D . ? HOH A 411 . ? 1_555 ? 4 AC2 1 GLN A 156 ? GLN A 142 . ? 1_555 ? # _database_PDB_matrix.entry_id 4MO7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4MO7 _atom_sites.fract_transf_matrix[1][1] 0.026863 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009684 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010677 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019848 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -13 ? ? ? A . n A 1 2 PRO 2 -12 ? ? ? A . n A 1 3 LEU 3 -11 ? ? ? A . n A 1 4 GLY 4 -10 ? ? ? A . n A 1 5 SER 5 -9 ? ? ? A . n A 1 6 MET 6 -8 ? ? ? A . n A 1 7 ASP 7 -7 ? ? ? A . n A 1 8 GLU 8 -6 ? ? ? A . n A 1 9 HIS 9 -5 ? ? ? A . n A 1 10 LYS 10 -4 ? ? ? A . n A 1 11 ALA 11 -3 ? ? ? A . n A 1 12 LEU 12 -2 ? ? ? A . n A 1 13 GLY 13 -1 ? ? ? A . n A 1 14 VAL 14 0 ? ? ? A . n A 1 15 MET 15 1 ? ? ? A . n A 1 16 ARG 16 2 ? ? ? A . n A 1 17 THR 17 3 ? ? ? A . n A 1 18 MET 18 4 ? ? ? A . n A 1 19 VAL 19 5 ? ? ? A . n A 1 20 ASP 20 6 ? ? ? A . n A 1 21 SER 21 7 ? ? ? A . n A 1 22 GLY 22 8 ? ? ? A . n A 1 23 GLN 23 9 ? ? ? A . n A 1 24 LEU 24 10 ? ? ? A . n A 1 25 THR 25 11 11 THR THR A . n A 1 26 ASP 26 12 12 ASP ASP A . n A 1 27 PRO 27 13 13 PRO PRO A . n A 1 28 GLU 28 14 14 GLU GLU A . n A 1 29 SER 29 15 15 SER SER A . n A 1 30 ALA 30 16 16 ALA ALA A . n A 1 31 ARG 31 17 17 ARG ARG A . n A 1 32 GLY 32 18 18 GLY GLY A . n A 1 33 LYS 33 19 19 LYS LYS A . n A 1 34 LEU 34 20 20 LEU LEU A . n A 1 35 LEU 35 21 21 LEU LEU A . n A 1 36 GLN 36 22 22 GLN GLN A . n A 1 37 THR 37 23 23 THR THR A . n A 1 38 ALA 38 24 24 ALA ALA A . n A 1 39 ALA 39 25 25 ALA ALA A . n A 1 40 HIS 40 26 26 HIS HIS A . n A 1 41 LEU 41 27 27 LEU LEU A . n A 1 42 PHE 42 28 28 PHE PHE A . n A 1 43 ARG 43 29 29 ARG ARG A . n A 1 44 ASN 44 30 30 ASN ASN A . n A 1 45 LYS 45 31 31 LYS LYS A . n A 1 46 GLY 46 32 32 GLY GLY A . n A 1 47 PHE 47 33 33 PHE PHE A . n A 1 48 GLU 48 34 34 GLU GLU A . n A 1 49 ARG 49 35 35 ARG ARG A . n A 1 50 THR 50 36 36 THR THR A . n A 1 51 THR 51 37 37 THR THR A . n A 1 52 VAL 52 38 38 VAL VAL A . n A 1 53 ARG 53 39 39 ARG ARG A . n A 1 54 ASP 54 40 40 ASP ASP A . n A 1 55 LEU 55 41 41 LEU LEU A . n A 1 56 ALA 56 42 42 ALA ALA A . n A 1 57 SER 57 43 43 SER SER A . n A 1 58 ALA 58 44 44 ALA ALA A . n A 1 59 VAL 59 45 45 VAL VAL A . n A 1 60 GLY 60 46 46 GLY GLY A . n A 1 61 ILE 61 47 47 ILE ILE A . n A 1 62 GLN 62 48 48 GLN GLN A . n A 1 63 SER 63 49 49 SER SER A . n A 1 64 GLY 64 50 50 GLY GLY A . n A 1 65 SER 65 51 51 SER SER A . n A 1 66 ILE 66 52 52 ILE ILE A . n A 1 67 PHE 67 53 53 PHE PHE A . n A 1 68 HIS 68 54 54 HIS HIS A . n A 1 69 HIS 69 55 55 HIS HIS A . n A 1 70 PHE 70 56 56 PHE PHE A . n A 1 71 LYS 71 57 57 LYS LYS A . n A 1 72 SER 72 58 58 SER SER A . n A 1 73 LYS 73 59 59 LYS LYS A . n A 1 74 ASP 74 60 60 ASP ASP A . n A 1 75 GLU 75 61 61 GLU GLU A . n A 1 76 ILE 76 62 62 ILE ILE A . n A 1 77 LEU 77 63 63 LEU LEU A . n A 1 78 ARG 78 64 64 ARG ARG A . n A 1 79 ALA 79 65 65 ALA ALA A . n A 1 80 VAL 80 66 66 VAL VAL A . n A 1 81 MET 81 67 67 MET MET A . n A 1 82 GLU 82 68 68 GLU GLU A . n A 1 83 GLU 83 69 69 GLU GLU A . n A 1 84 THR 84 70 70 THR THR A . n A 1 85 ILE 85 71 71 ILE ILE A . n A 1 86 HIS 86 72 72 HIS HIS A . n A 1 87 TYR 87 73 73 TYR TYR A . n A 1 88 ASN 88 74 74 ASN ASN A . n A 1 89 THR 89 75 75 THR THR A . n A 1 90 ALA 90 76 76 ALA ALA A . n A 1 91 MET 91 77 77 MET MET A . n A 1 92 MET 92 78 78 MET MET A . n A 1 93 ARG 93 79 79 ARG ARG A . n A 1 94 ALA 94 80 80 ALA ALA A . n A 1 95 SER 95 81 81 SER SER A . n A 1 96 LEU 96 82 82 LEU LEU A . n A 1 97 GLU 97 83 83 GLU GLU A . n A 1 98 GLU 98 84 84 GLU GLU A . n A 1 99 ALA 99 85 85 ALA ALA A . n A 1 100 SER 100 86 86 SER SER A . n A 1 101 THR 101 87 87 THR THR A . n A 1 102 VAL 102 88 88 VAL VAL A . n A 1 103 ARG 103 89 89 ARG ARG A . n A 1 104 GLU 104 90 90 GLU GLU A . n A 1 105 ARG 105 91 91 ARG ARG A . n A 1 106 VAL 106 92 92 VAL VAL A . n A 1 107 LEU 107 93 93 LEU LEU A . n A 1 108 ALA 108 94 94 ALA ALA A . n A 1 109 LEU 109 95 95 LEU LEU A . n A 1 110 ILE 110 96 96 ILE ILE A . n A 1 111 ARG 111 97 97 ARG ARG A . n A 1 112 CME 112 98 98 CME CME A . n A 1 113 GLU 113 99 99 GLU GLU A . n A 1 114 LEU 114 100 100 LEU LEU A . n A 1 115 GLN 115 101 101 GLN GLN A . n A 1 116 SER 116 102 102 SER SER A . n A 1 117 ILE 117 103 103 ILE ILE A . n A 1 118 MET 118 104 104 MET MET A . n A 1 119 GLY 119 105 105 GLY GLY A . n A 1 120 GLY 120 106 106 GLY GLY A . n A 1 121 SER 121 107 107 SER SER A . n A 1 122 GLY 122 108 108 GLY GLY A . n A 1 123 GLU 123 109 109 GLU GLU A . n A 1 124 ALA 124 110 110 ALA ALA A . n A 1 125 MET 125 111 111 MET MET A . n A 1 126 ALA 126 112 112 ALA ALA A . n A 1 127 VAL 127 113 113 VAL VAL A . n A 1 128 LEU 128 114 114 LEU LEU A . n A 1 129 VAL 129 115 115 VAL VAL A . n A 1 130 TYR 130 116 116 TYR TYR A . n A 1 131 GLU 131 117 117 GLU GLU A . n A 1 132 TRP 132 118 118 TRP TRP A . n A 1 133 ARG 133 119 119 ARG ARG A . n A 1 134 SER 134 120 120 SER SER A . n A 1 135 LEU 135 121 121 LEU LEU A . n A 1 136 SER 136 122 122 SER SER A . n A 1 137 ALA 137 123 123 ALA ALA A . n A 1 138 GLU 138 124 124 GLU GLU A . n A 1 139 GLY 139 125 125 GLY GLY A . n A 1 140 GLN 140 126 126 GLN GLN A . n A 1 141 ALA 141 127 127 ALA ALA A . n A 1 142 HIS 142 128 128 HIS HIS A . n A 1 143 VAL 143 129 129 VAL VAL A . n A 1 144 LEU 144 130 130 LEU LEU A . n A 1 145 ALA 145 131 131 ALA ALA A . n A 1 146 LEU 146 132 132 LEU LEU A . n A 1 147 ARG 147 133 133 ARG ARG A . n A 1 148 ASP 148 134 134 ASP ASP A . n A 1 149 VAL 149 135 135 VAL VAL A . n A 1 150 TYR 150 136 136 TYR TYR A . n A 1 151 GLU 151 137 137 GLU GLU A . n A 1 152 GLN 152 138 138 GLN GLN A . n A 1 153 ILE 153 139 139 ILE ILE A . n A 1 154 TRP 154 140 140 TRP TRP A . n A 1 155 LEU 155 141 141 LEU LEU A . n A 1 156 GLN 156 142 142 GLN GLN A . n A 1 157 VAL 157 143 143 VAL VAL A . n A 1 158 LEU 158 144 144 LEU LEU A . n A 1 159 GLY 159 145 145 GLY GLY A . n A 1 160 GLU 160 146 146 GLU GLU A . n A 1 161 ALA 161 147 147 ALA ALA A . n A 1 162 LYS 162 148 148 LYS LYS A . n A 1 163 ALA 163 149 149 ALA ALA A . n A 1 164 ALA 164 150 150 ALA ALA A . n A 1 165 GLY 165 151 151 GLY GLY A . n A 1 166 TYR 166 152 152 TYR TYR A . n A 1 167 ILE 167 153 153 ILE ILE A . n A 1 168 ARG 168 154 154 ARG ARG A . n A 1 169 GLY 169 155 155 GLY GLY A . n A 1 170 ASP 170 156 156 ASP ASP A . n A 1 171 VAL 171 157 157 VAL VAL A . n A 1 172 PHE 172 158 158 PHE PHE A . n A 1 173 ILE 173 159 159 ILE ILE A . n A 1 174 THR 174 160 160 THR THR A . n A 1 175 ARG 175 161 161 ARG ARG A . n A 1 176 ARG 176 162 162 ARG ARG A . n A 1 177 PHE 177 163 163 PHE PHE A . n A 1 178 LEU 178 164 164 LEU LEU A . n A 1 179 THR 179 165 165 THR THR A . n A 1 180 GLY 180 166 166 GLY GLY A . n A 1 181 ALA 181 167 167 ALA ALA A . n A 1 182 LEU 182 168 168 LEU LEU A . n A 1 183 SER 183 169 169 SER SER A . n A 1 184 TRP 184 170 170 TRP TRP A . n A 1 185 THR 185 171 171 THR THR A . n A 1 186 THR 186 172 172 THR THR A . n A 1 187 THR 187 173 173 THR THR A . n A 1 188 TRP 188 174 174 TRP TRP A . n A 1 189 PHE 189 175 175 PHE PHE A . n A 1 190 ARG 190 176 176 ARG ARG A . n A 1 191 ALA 191 177 177 ALA ALA A . n A 1 192 GLN 192 178 178 GLN GLN A . n A 1 193 GLY 193 179 179 GLY GLY A . n A 1 194 SER 194 180 180 SER SER A . n A 1 195 LEU 195 181 181 LEU LEU A . n A 1 196 THR 196 182 182 THR THR A . n A 1 197 LEU 197 183 183 LEU LEU A . n A 1 198 GLU 198 184 184 GLU GLU A . n A 1 199 GLU 199 185 185 GLU GLU A . n A 1 200 LEU 200 186 186 LEU LEU A . n A 1 201 ALA 201 187 187 ALA ALA A . n A 1 202 GLU 202 188 188 GLU GLU A . n A 1 203 GLU 203 189 189 GLU GLU A . n A 1 204 ALA 204 190 190 ALA ALA A . n A 1 205 LEU 205 191 191 LEU LEU A . n A 1 206 LEU 206 192 192 LEU LEU A . n A 1 207 MET 207 193 193 MET MET A . n A 1 208 VAL 208 194 194 VAL VAL A . n A 1 209 LEU 209 195 195 LEU LEU A . n A 1 210 LYS 210 196 196 LYS LYS A . n A 1 211 SER 211 197 197 SER SER A . n A 1 212 ASP 212 198 198 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 1 MG MG A . C 3 BME 1 202 1 BME BME A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 9 HOH HOH A . D 4 HOH 10 310 10 HOH HOH A . D 4 HOH 11 311 11 HOH HOH A . D 4 HOH 12 312 12 HOH HOH A . D 4 HOH 13 313 13 HOH HOH A . D 4 HOH 14 314 14 HOH HOH A . D 4 HOH 15 315 15 HOH HOH A . D 4 HOH 16 316 16 HOH HOH A . D 4 HOH 17 317 17 HOH HOH A . D 4 HOH 18 318 18 HOH HOH A . D 4 HOH 19 319 19 HOH HOH A . D 4 HOH 20 320 20 HOH HOH A . D 4 HOH 21 321 21 HOH HOH A . D 4 HOH 22 322 22 HOH HOH A . D 4 HOH 23 323 23 HOH HOH A . D 4 HOH 24 324 24 HOH HOH A . D 4 HOH 25 325 25 HOH HOH A . D 4 HOH 26 326 26 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 28 HOH HOH A . D 4 HOH 29 329 29 HOH HOH A . D 4 HOH 30 330 30 HOH HOH A . D 4 HOH 31 331 31 HOH HOH A . D 4 HOH 32 332 32 HOH HOH A . D 4 HOH 33 333 33 HOH HOH A . D 4 HOH 34 334 34 HOH HOH A . D 4 HOH 35 335 35 HOH HOH A . D 4 HOH 36 336 36 HOH HOH A . D 4 HOH 37 337 37 HOH HOH A . D 4 HOH 38 338 38 HOH HOH A . D 4 HOH 39 339 39 HOH HOH A . D 4 HOH 40 340 40 HOH HOH A . D 4 HOH 41 341 41 HOH HOH A . D 4 HOH 42 342 42 HOH HOH A . D 4 HOH 43 343 43 HOH HOH A . D 4 HOH 44 344 44 HOH HOH A . D 4 HOH 45 345 45 HOH HOH A . D 4 HOH 46 346 46 HOH HOH A . D 4 HOH 47 347 47 HOH HOH A . D 4 HOH 48 348 48 HOH HOH A . D 4 HOH 49 349 49 HOH HOH A . D 4 HOH 50 350 50 HOH HOH A . D 4 HOH 51 351 51 HOH HOH A . D 4 HOH 52 352 52 HOH HOH A . D 4 HOH 53 353 53 HOH HOH A . D 4 HOH 54 354 54 HOH HOH A . D 4 HOH 55 355 55 HOH HOH A . D 4 HOH 56 356 56 HOH HOH A . D 4 HOH 57 357 57 HOH HOH A . D 4 HOH 58 358 58 HOH HOH A . D 4 HOH 59 359 59 HOH HOH A . D 4 HOH 60 360 60 HOH HOH A . D 4 HOH 61 361 61 HOH HOH A . D 4 HOH 62 362 62 HOH HOH A . D 4 HOH 63 363 63 HOH HOH A . D 4 HOH 64 364 64 HOH HOH A . D 4 HOH 65 365 65 HOH HOH A . D 4 HOH 66 366 66 HOH HOH A . D 4 HOH 67 367 67 HOH HOH A . D 4 HOH 68 368 68 HOH HOH A . D 4 HOH 69 369 69 HOH HOH A . D 4 HOH 70 370 70 HOH HOH A . D 4 HOH 71 371 71 HOH HOH A . D 4 HOH 72 372 72 HOH HOH A . D 4 HOH 73 373 73 HOH HOH A . D 4 HOH 74 374 74 HOH HOH A . D 4 HOH 75 375 75 HOH HOH A . D 4 HOH 76 376 76 HOH HOH A . D 4 HOH 77 377 77 HOH HOH A . D 4 HOH 78 378 78 HOH HOH A . D 4 HOH 79 379 79 HOH HOH A . D 4 HOH 80 380 80 HOH HOH A . D 4 HOH 81 381 81 HOH HOH A . D 4 HOH 82 382 82 HOH HOH A . D 4 HOH 83 383 83 HOH HOH A . D 4 HOH 84 384 84 HOH HOH A . D 4 HOH 85 385 85 HOH HOH A . D 4 HOH 86 386 86 HOH HOH A . D 4 HOH 87 387 87 HOH HOH A . D 4 HOH 88 388 88 HOH HOH A . D 4 HOH 89 389 89 HOH HOH A . D 4 HOH 90 390 90 HOH HOH A . D 4 HOH 91 391 91 HOH HOH A . D 4 HOH 92 392 92 HOH HOH A . D 4 HOH 93 393 93 HOH HOH A . D 4 HOH 94 394 94 HOH HOH A . D 4 HOH 95 395 95 HOH HOH A . D 4 HOH 96 396 96 HOH HOH A . D 4 HOH 97 397 97 HOH HOH A . D 4 HOH 98 398 98 HOH HOH A . D 4 HOH 99 399 99 HOH HOH A . D 4 HOH 100 400 100 HOH HOH A . D 4 HOH 101 401 101 HOH HOH A . D 4 HOH 102 402 102 HOH HOH A . D 4 HOH 103 403 103 HOH HOH A . D 4 HOH 104 404 104 HOH HOH A . D 4 HOH 105 405 105 HOH HOH A . D 4 HOH 106 406 106 HOH HOH A . D 4 HOH 107 407 107 HOH HOH A . D 4 HOH 108 408 108 HOH HOH A . D 4 HOH 109 409 109 HOH HOH A . D 4 HOH 110 410 110 HOH HOH A . D 4 HOH 111 411 111 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CME _pdbx_struct_mod_residue.label_seq_id 112 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CME _pdbx_struct_mod_residue.auth_seq_id 98 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2390 ? 1 MORE -18 ? 1 'SSA (A^2)' 18800 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_857 -x+3,y,-z+2 -1.0000000000 0.0000000000 0.0000000000 75.3592492411 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 100.7688311896 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A MG 201 ? B MG . 2 1 A HOH 357 ? D HOH . 3 1 A HOH 384 ? D HOH . 4 1 A HOH 388 ? D HOH . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id D _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 387 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 201 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 411 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 79.7 _pdbx_struct_conn_angle.value_esd ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHENIX 'model building' '(phenix.refine: 1.7.3_928)' ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing 1.7.3_928 ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 363 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 365 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_757 _pdbx_validate_symm_contact.dist 2.13 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 12 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 13 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 13 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.60 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.30 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 107 ? ? 61.08 -10.10 2 1 TRP A 174 ? ? -141.25 -16.37 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -13 ? A GLY 1 2 1 Y 1 A PRO -12 ? A PRO 2 3 1 Y 1 A LEU -11 ? A LEU 3 4 1 Y 1 A GLY -10 ? A GLY 4 5 1 Y 1 A SER -9 ? A SER 5 6 1 Y 1 A MET -8 ? A MET 6 7 1 Y 1 A ASP -7 ? A ASP 7 8 1 Y 1 A GLU -6 ? A GLU 8 9 1 Y 1 A HIS -5 ? A HIS 9 10 1 Y 1 A LYS -4 ? A LYS 10 11 1 Y 1 A ALA -3 ? A ALA 11 12 1 Y 1 A LEU -2 ? A LEU 12 13 1 Y 1 A GLY -1 ? A GLY 13 14 1 Y 1 A VAL 0 ? A VAL 14 15 1 Y 1 A MET 1 ? A MET 15 16 1 Y 1 A ARG 2 ? A ARG 16 17 1 Y 1 A THR 3 ? A THR 17 18 1 Y 1 A MET 4 ? A MET 18 19 1 Y 1 A VAL 5 ? A VAL 19 20 1 Y 1 A ASP 6 ? A ASP 20 21 1 Y 1 A SER 7 ? A SER 21 22 1 Y 1 A GLY 8 ? A GLY 22 23 1 Y 1 A GLN 9 ? A GLN 23 24 1 Y 1 A LEU 10 ? A LEU 24 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 BETA-MERCAPTOETHANOL BME 4 water HOH #