data_4MPL # _entry.id 4MPL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.342 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4MPL RCSB RCSB082206 WWPDB D_1000082206 # _pdbx_database_status.entry_id 4MPL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-09-13 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, W.' 1 'Morrell, N.W.' 2 'Wei, Z.' 3 # _citation.id primary _citation.title 'Regulation of Bone Morphogenetic Protein 9 (BMP9) by Redox-dependent Proteolysis.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 289 _citation.page_first 31150 _citation.page_last 31159 _citation.year 2014 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25237187 _citation.pdbx_database_id_DOI 10.1074/jbc.M114.579771 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wei, Z.' 1 ? primary 'Salmon, R.M.' 2 ? primary 'Upton, P.D.' 3 ? primary 'Morrell, N.W.' 4 ? primary 'Li, W.' 5 ? # _cell.entry_id 4MPL _cell.length_a 71.270 _cell.length_b 71.270 _cell.length_c 145.890 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MPL _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Growth/differentiation factor 2' 12931.852 1 ? ? 'UNP residues 321-429' ? 2 water nat water 18.015 91 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GDF-2, Bone morphogenetic protein 9, BMP-9' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SHHHHHHAGAGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACC VPTKLSPISVLYKDDMGVPTLKYHYEGMSVAECGCR ; _entity_poly.pdbx_seq_one_letter_code_can ;SHHHHHHAGAGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACC VPTKLSPISVLYKDDMGVPTLKYHYEGMSVAECGCR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 ALA n 1 9 GLY n 1 10 ALA n 1 11 GLY n 1 12 SER n 1 13 HIS n 1 14 CYS n 1 15 GLN n 1 16 LYS n 1 17 THR n 1 18 SER n 1 19 LEU n 1 20 ARG n 1 21 VAL n 1 22 ASN n 1 23 PHE n 1 24 GLU n 1 25 ASP n 1 26 ILE n 1 27 GLY n 1 28 TRP n 1 29 ASP n 1 30 SER n 1 31 TRP n 1 32 ILE n 1 33 ILE n 1 34 ALA n 1 35 PRO n 1 36 LYS n 1 37 GLU n 1 38 TYR n 1 39 GLU n 1 40 ALA n 1 41 TYR n 1 42 GLU n 1 43 CYS n 1 44 LYS n 1 45 GLY n 1 46 GLY n 1 47 CYS n 1 48 PHE n 1 49 PHE n 1 50 PRO n 1 51 LEU n 1 52 ALA n 1 53 ASP n 1 54 ASP n 1 55 VAL n 1 56 THR n 1 57 PRO n 1 58 THR n 1 59 LYS n 1 60 HIS n 1 61 ALA n 1 62 ILE n 1 63 VAL n 1 64 GLN n 1 65 THR n 1 66 LEU n 1 67 VAL n 1 68 HIS n 1 69 LEU n 1 70 LYS n 1 71 PHE n 1 72 PRO n 1 73 THR n 1 74 LYS n 1 75 VAL n 1 76 GLY n 1 77 LYS n 1 78 ALA n 1 79 CYS n 1 80 CYS n 1 81 VAL n 1 82 PRO n 1 83 THR n 1 84 LYS n 1 85 LEU n 1 86 SER n 1 87 PRO n 1 88 ILE n 1 89 SER n 1 90 VAL n 1 91 LEU n 1 92 TYR n 1 93 LYS n 1 94 ASP n 1 95 ASP n 1 96 MET n 1 97 GLY n 1 98 VAL n 1 99 PRO n 1 100 THR n 1 101 LEU n 1 102 LYS n 1 103 TYR n 1 104 HIS n 1 105 TYR n 1 106 GLU n 1 107 GLY n 1 108 MET n 1 109 SER n 1 110 VAL n 1 111 ALA n 1 112 GLU n 1 113 CYS n 1 114 GLY n 1 115 CYS n 1 116 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BMP9, GDF2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Hek293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCEP4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GDF2_HUMAN _struct_ref.pdbx_db_accession Q9UK05 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AGAGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACCVPTKLSP ISVLYKDDMGVPTLKYHYEGMSVAECGCR ; _struct_ref.pdbx_align_begin 321 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MPL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UK05 _struct_ref_seq.db_align_beg 321 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 429 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MPL SER A 1 ? UNP Q9UK05 ? ? 'expression tag' -5 1 1 4MPL HIS A 2 ? UNP Q9UK05 ? ? 'expression tag' -4 2 1 4MPL HIS A 3 ? UNP Q9UK05 ? ? 'expression tag' -3 3 1 4MPL HIS A 4 ? UNP Q9UK05 ? ? 'expression tag' -2 4 1 4MPL HIS A 5 ? UNP Q9UK05 ? ? 'expression tag' -1 5 1 4MPL HIS A 6 ? UNP Q9UK05 ? ? 'expression tag' 0 6 1 4MPL HIS A 7 ? UNP Q9UK05 ? ? 'expression tag' 1 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4MPL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.58 _exptl_crystal.density_percent_sol 65.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.12M magnesium nitrate, 12% PEG3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 2012-07-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4MPL _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.170 _reflns.d_resolution_high 1.900 _reflns.number_obs 15096 _reflns.number_all 15096 _reflns.percent_possible_obs 99.300 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_netI_over_sigmaI 15.600 _reflns.B_iso_Wilson_estimate 30.790 _reflns.pdbx_redundancy 7.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 1.900 2.000 98.600 0.752 0.752 1.000 8.000 ? ? ? ? ? ? 1 2 2.000 2.120 99.000 0.409 0.409 1.900 8.000 ? ? ? ? ? ? 1 3 2.120 2.270 99.000 0.247 0.247 3.100 8.000 ? ? ? ? ? ? 1 4 2.270 2.450 99.400 0.156 0.156 4.900 8.000 ? ? ? ? ? ? 1 5 2.450 2.690 99.500 0.111 0.111 6.800 7.900 ? ? ? ? ? ? 1 6 2.690 3.000 99.700 0.074 0.074 9.400 7.800 ? ? ? ? ? ? 1 7 3.000 3.470 99.700 0.057 0.057 11.100 7.700 ? ? ? ? ? ? 1 8 3.470 4.250 99.900 0.053 0.053 10.700 7.400 ? ? ? ? ? ? 1 9 4.250 6.010 99.700 0.046 0.046 12.400 6.900 ? ? ? ? ? ? 1 10 6.010 40.170 98.700 0.036 0.036 16.700 6.900 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4MPL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15087 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.170 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 98.91 _refine.ls_R_factor_obs 0.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1987 _refine.ls_R_factor_R_free 0.2237 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.10 _refine.ls_number_reflns_R_free 769 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.130 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.5972 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 24.08 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 814 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 905 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 40.170 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 864 'X-RAY DIFFRACTION' ? f_angle_d 1.180 ? ? 1174 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.950 ? ? 309 'X-RAY DIFFRACTION' ? f_chiral_restr 0.093 ? ? 129 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 149 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.9000 2.0467 2780 0.2667 98.00 0.3090 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.0467 2.2527 2813 0.2288 99.00 0.2808 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.2527 2.5786 2837 0.2101 99.00 0.2615 . . 159 . . . . 'X-RAY DIFFRACTION' . 2.5786 3.2486 2854 0.2012 99.00 0.2436 . . 177 . . . . 'X-RAY DIFFRACTION' . 3.2486 40.1787 3034 0.1799 99.00 0.1784 . . 144 . . . . # _struct.entry_id 4MPL _struct.title 'Crystal structure of BMP9 at 1.90 Angstrom' _struct.pdbx_descriptor 'Growth/differentiation factor 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MPL _struct_keywords.text 'growth factor/cytokine, CYTOKINE' _struct_keywords.pdbx_keywords CYTOKINE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id THR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 58 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id PHE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 71 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id THR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 52 _struct_conf.end_auth_comp_id PHE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 65 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 8 A CYS 74 1_555 ? ? ? ? ? ? ? 2.018 ? ? disulf2 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 37 A CYS 107 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf3 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 41 A CYS 109 1_555 ? ? ? ? ? ? ? 2.004 ? ? disulf4 disulf ? ? A CYS 79 SG A ? ? 1_555 A CYS 79 SG A ? A CYS 73 A CYS 73 6_545 ? ? ? ? ? ? ? 2.027 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 34 A . ? ALA 28 A PRO 35 A ? PRO 29 A 1 -3.20 2 PHE 49 A . ? PHE 43 A PRO 50 A ? PRO 44 A 1 3.50 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 15 ? THR A 17 ? GLN A 9 THR A 11 A 2 GLU A 42 ? LYS A 44 ? GLU A 36 LYS A 38 B 1 ARG A 20 ? ASN A 22 ? ARG A 14 ASN A 16 B 2 GLU A 37 ? GLU A 39 ? GLU A 31 GLU A 33 C 1 ILE A 32 ? ALA A 34 ? ILE A 26 ALA A 28 C 2 CYS A 80 ? LYS A 93 ? CYS A 74 LYS A 87 C 3 PRO A 99 ? CYS A 115 ? PRO A 93 CYS A 109 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 15 ? N GLN A 9 O LYS A 44 ? O LYS A 38 B 1 2 N VAL A 21 ? N VAL A 15 O TYR A 38 ? O TYR A 32 C 1 2 N ALA A 34 ? N ALA A 28 O LEU A 91 ? O LEU A 85 C 2 3 N VAL A 90 ? N VAL A 84 O LYS A 102 ? O LYS A 96 # _atom_sites.entry_id 4MPL _atom_sites.fract_transf_matrix[1][1] 0.014031 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014031 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006854 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -5 ? ? ? A . n A 1 2 HIS 2 -4 ? ? ? A . n A 1 3 HIS 3 -3 ? ? ? A . n A 1 4 HIS 4 -2 ? ? ? A . n A 1 5 HIS 5 -1 ? ? ? A . n A 1 6 HIS 6 0 ? ? ? A . n A 1 7 HIS 7 1 ? ? ? A . n A 1 8 ALA 8 2 ? ? ? A . n A 1 9 GLY 9 3 ? ? ? A . n A 1 10 ALA 10 4 4 ALA ALA A . n A 1 11 GLY 11 5 5 GLY GLY A . n A 1 12 SER 12 6 6 SER SER A . n A 1 13 HIS 13 7 7 HIS HIS A . n A 1 14 CYS 14 8 8 CYS CYS A . n A 1 15 GLN 15 9 9 GLN GLN A . n A 1 16 LYS 16 10 10 LYS LYS A . n A 1 17 THR 17 11 11 THR THR A . n A 1 18 SER 18 12 12 SER SER A . n A 1 19 LEU 19 13 13 LEU LEU A . n A 1 20 ARG 20 14 14 ARG ARG A . n A 1 21 VAL 21 15 15 VAL VAL A . n A 1 22 ASN 22 16 16 ASN ASN A . n A 1 23 PHE 23 17 17 PHE PHE A . n A 1 24 GLU 24 18 18 GLU GLU A . n A 1 25 ASP 25 19 19 ASP ASP A . n A 1 26 ILE 26 20 20 ILE ILE A . n A 1 27 GLY 27 21 21 GLY GLY A . n A 1 28 TRP 28 22 22 TRP TRP A . n A 1 29 ASP 29 23 23 ASP ASP A . n A 1 30 SER 30 24 24 SER SER A . n A 1 31 TRP 31 25 25 TRP TRP A . n A 1 32 ILE 32 26 26 ILE ILE A . n A 1 33 ILE 33 27 27 ILE ILE A . n A 1 34 ALA 34 28 28 ALA ALA A . n A 1 35 PRO 35 29 29 PRO PRO A . n A 1 36 LYS 36 30 30 LYS LYS A . n A 1 37 GLU 37 31 31 GLU GLU A . n A 1 38 TYR 38 32 32 TYR TYR A . n A 1 39 GLU 39 33 33 GLU GLU A . n A 1 40 ALA 40 34 34 ALA ALA A . n A 1 41 TYR 41 35 35 TYR TYR A . n A 1 42 GLU 42 36 36 GLU GLU A . n A 1 43 CYS 43 37 37 CYS CYS A . n A 1 44 LYS 44 38 38 LYS LYS A . n A 1 45 GLY 45 39 39 GLY GLY A . n A 1 46 GLY 46 40 40 GLY GLY A . n A 1 47 CYS 47 41 41 CYS CYS A . n A 1 48 PHE 48 42 42 PHE PHE A . n A 1 49 PHE 49 43 43 PHE PHE A . n A 1 50 PRO 50 44 44 PRO PRO A . n A 1 51 LEU 51 45 45 LEU LEU A . n A 1 52 ALA 52 46 46 ALA ALA A . n A 1 53 ASP 53 47 47 ASP ASP A . n A 1 54 ASP 54 48 48 ASP ASP A . n A 1 55 VAL 55 49 49 VAL VAL A . n A 1 56 THR 56 50 50 THR THR A . n A 1 57 PRO 57 51 51 PRO PRO A . n A 1 58 THR 58 52 52 THR THR A . n A 1 59 LYS 59 53 53 LYS LYS A . n A 1 60 HIS 60 54 54 HIS HIS A . n A 1 61 ALA 61 55 55 ALA ALA A . n A 1 62 ILE 62 56 56 ILE ILE A . n A 1 63 VAL 63 57 57 VAL VAL A . n A 1 64 GLN 64 58 58 GLN GLN A . n A 1 65 THR 65 59 59 THR THR A . n A 1 66 LEU 66 60 60 LEU LEU A . n A 1 67 VAL 67 61 61 VAL VAL A . n A 1 68 HIS 68 62 62 HIS HIS A . n A 1 69 LEU 69 63 63 LEU LEU A . n A 1 70 LYS 70 64 64 LYS LYS A . n A 1 71 PHE 71 65 65 PHE PHE A . n A 1 72 PRO 72 66 66 PRO PRO A . n A 1 73 THR 73 67 67 THR THR A . n A 1 74 LYS 74 68 68 LYS LYS A . n A 1 75 VAL 75 69 69 VAL VAL A . n A 1 76 GLY 76 70 70 GLY GLY A . n A 1 77 LYS 77 71 71 LYS LYS A . n A 1 78 ALA 78 72 72 ALA ALA A . n A 1 79 CYS 79 73 73 CYS CYS A . n A 1 80 CYS 80 74 74 CYS CYS A . n A 1 81 VAL 81 75 75 VAL VAL A . n A 1 82 PRO 82 76 76 PRO PRO A . n A 1 83 THR 83 77 77 THR THR A . n A 1 84 LYS 84 78 78 LYS LYS A . n A 1 85 LEU 85 79 79 LEU LEU A . n A 1 86 SER 86 80 80 SER SER A . n A 1 87 PRO 87 81 81 PRO PRO A . n A 1 88 ILE 88 82 82 ILE ILE A . n A 1 89 SER 89 83 83 SER SER A . n A 1 90 VAL 90 84 84 VAL VAL A . n A 1 91 LEU 91 85 85 LEU LEU A . n A 1 92 TYR 92 86 86 TYR TYR A . n A 1 93 LYS 93 87 87 LYS LYS A . n A 1 94 ASP 94 88 88 ASP ASP A . n A 1 95 ASP 95 89 89 ASP ASP A . n A 1 96 MET 96 90 90 MET MET A . n A 1 97 GLY 97 91 91 GLY GLY A . n A 1 98 VAL 98 92 92 VAL VAL A . n A 1 99 PRO 99 93 93 PRO PRO A . n A 1 100 THR 100 94 94 THR THR A . n A 1 101 LEU 101 95 95 LEU LEU A . n A 1 102 LYS 102 96 96 LYS LYS A . n A 1 103 TYR 103 97 97 TYR TYR A . n A 1 104 HIS 104 98 98 HIS HIS A . n A 1 105 TYR 105 99 99 TYR TYR A . n A 1 106 GLU 106 100 100 GLU GLU A . n A 1 107 GLY 107 101 101 GLY GLY A . n A 1 108 MET 108 102 102 MET MET A . n A 1 109 SER 109 103 103 SER SER A . n A 1 110 VAL 110 104 104 VAL VAL A . n A 1 111 ALA 111 105 105 ALA ALA A . n A 1 112 GLU 112 106 106 GLU GLU A . n A 1 113 CYS 113 107 107 CYS CYS A . n A 1 114 GLY 114 108 108 GLY GLY A . n A 1 115 CYS 115 109 109 CYS CYS A . n A 1 116 ARG 116 110 110 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 201 HOH HOH A . B 2 HOH 2 202 202 HOH HOH A . B 2 HOH 3 203 203 HOH HOH A . B 2 HOH 4 204 204 HOH HOH A . B 2 HOH 5 205 205 HOH HOH A . B 2 HOH 6 206 206 HOH HOH A . B 2 HOH 7 207 207 HOH HOH A . B 2 HOH 8 208 208 HOH HOH A . B 2 HOH 9 209 209 HOH HOH A . B 2 HOH 10 210 210 HOH HOH A . B 2 HOH 11 211 211 HOH HOH A . B 2 HOH 12 212 212 HOH HOH A . B 2 HOH 13 213 213 HOH HOH A . B 2 HOH 14 214 214 HOH HOH A . B 2 HOH 15 215 215 HOH HOH A . B 2 HOH 16 216 216 HOH HOH A . B 2 HOH 17 217 217 HOH HOH A . B 2 HOH 18 218 218 HOH HOH A . B 2 HOH 19 219 219 HOH HOH A . B 2 HOH 20 220 220 HOH HOH A . B 2 HOH 21 221 221 HOH HOH A . B 2 HOH 22 222 222 HOH HOH A . B 2 HOH 23 223 223 HOH HOH A . B 2 HOH 24 224 224 HOH HOH A . B 2 HOH 25 225 225 HOH HOH A . B 2 HOH 26 226 226 HOH HOH A . B 2 HOH 27 227 227 HOH HOH A . B 2 HOH 28 228 228 HOH HOH A . B 2 HOH 29 229 229 HOH HOH A . B 2 HOH 30 230 230 HOH HOH A . B 2 HOH 31 231 231 HOH HOH A . B 2 HOH 32 232 232 HOH HOH A . B 2 HOH 33 233 233 HOH HOH A . B 2 HOH 34 234 234 HOH HOH A . B 2 HOH 35 235 235 HOH HOH A . B 2 HOH 36 236 236 HOH HOH A . B 2 HOH 37 237 237 HOH HOH A . B 2 HOH 38 238 238 HOH HOH A . B 2 HOH 39 239 240 HOH HOH A . B 2 HOH 40 240 242 HOH HOH A . B 2 HOH 41 241 243 HOH HOH A . B 2 HOH 42 242 244 HOH HOH A . B 2 HOH 43 243 245 HOH HOH A . B 2 HOH 44 244 247 HOH HOH A . B 2 HOH 45 245 248 HOH HOH A . B 2 HOH 46 246 249 HOH HOH A . B 2 HOH 47 247 250 HOH HOH A . B 2 HOH 48 248 251 HOH HOH A . B 2 HOH 49 249 252 HOH HOH A . B 2 HOH 50 250 253 HOH HOH A . B 2 HOH 51 251 254 HOH HOH A . B 2 HOH 52 252 255 HOH HOH A . B 2 HOH 53 253 256 HOH HOH A . B 2 HOH 54 254 257 HOH HOH A . B 2 HOH 55 255 258 HOH HOH A . B 2 HOH 56 256 259 HOH HOH A . B 2 HOH 57 257 260 HOH HOH A . B 2 HOH 58 258 261 HOH HOH A . B 2 HOH 59 259 262 HOH HOH A . B 2 HOH 60 260 263 HOH HOH A . B 2 HOH 61 261 264 HOH HOH A . B 2 HOH 62 262 265 HOH HOH A . B 2 HOH 63 263 266 HOH HOH A . B 2 HOH 64 264 267 HOH HOH A . B 2 HOH 65 265 268 HOH HOH A . B 2 HOH 66 266 269 HOH HOH A . B 2 HOH 67 267 270 HOH HOH A . B 2 HOH 68 268 271 HOH HOH A . B 2 HOH 69 269 272 HOH HOH A . B 2 HOH 70 270 273 HOH HOH A . B 2 HOH 71 271 274 HOH HOH A . B 2 HOH 72 272 275 HOH HOH A . B 2 HOH 73 273 276 HOH HOH A . B 2 HOH 74 274 277 HOH HOH A . B 2 HOH 75 275 278 HOH HOH A . B 2 HOH 76 276 279 HOH HOH A . B 2 HOH 77 277 280 HOH HOH A . B 2 HOH 78 278 281 HOH HOH A . B 2 HOH 79 279 283 HOH HOH A . B 2 HOH 80 280 284 HOH HOH A . B 2 HOH 81 281 285 HOH HOH A . B 2 HOH 82 282 286 HOH HOH A . B 2 HOH 83 283 287 HOH HOH A . B 2 HOH 84 284 288 HOH HOH A . B 2 HOH 85 285 289 HOH HOH A . B 2 HOH 86 286 290 HOH HOH A . B 2 HOH 87 287 291 HOH HOH A . B 2 HOH 88 288 292 HOH HOH A . B 2 HOH 89 289 293 HOH HOH A . B 2 HOH 90 290 294 HOH HOH A . B 2 HOH 91 291 295 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE -23 ? 1 'SSA (A^2)' 11890 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_545 x,-y-1/2,-z+1/4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -35.6350000000 0.0000000000 0.0000000000 -1.0000000000 36.4725000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 270 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2014-10-29 3 'Structure model' 1 2 2014-12-24 4 'Structure model' 1 3 2021-06-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_src_gen.host_org_common_name' 2 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_phasing_MR.entry_id 4MPL _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.950 _pdbx_phasing_MR.d_res_low_rotation 40.170 _pdbx_phasing_MR.d_res_high_translation 1.950 _pdbx_phasing_MR.d_res_low_translation 40.170 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.3.21 2013/01/04 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PHASER 2.5.2 'Tue Oct 9 18:16:08 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.8.2_1309 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 246 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 248 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 7 ? ? -154.61 75.49 2 1 TYR A 35 ? ? 58.29 172.19 3 1 ASP A 88 ? ? -74.23 -158.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 31 ? CD ? A GLU 37 CD 2 1 Y 1 A GLU 31 ? OE1 ? A GLU 37 OE1 3 1 Y 1 A GLU 31 ? OE2 ? A GLU 37 OE2 4 1 Y 1 A ASP 47 ? CG ? A ASP 53 CG 5 1 Y 1 A ASP 47 ? OD1 ? A ASP 53 OD1 6 1 Y 1 A ASP 47 ? OD2 ? A ASP 53 OD2 7 1 Y 1 A ASP 48 ? CG ? A ASP 54 CG 8 1 Y 1 A ASP 48 ? OD1 ? A ASP 54 OD1 9 1 Y 1 A ASP 48 ? OD2 ? A ASP 54 OD2 10 1 Y 1 A VAL 49 ? CG1 ? A VAL 55 CG1 11 1 Y 1 A VAL 49 ? CG2 ? A VAL 55 CG2 12 1 Y 1 A LYS 87 ? CD ? A LYS 93 CD 13 1 Y 1 A LYS 87 ? CE ? A LYS 93 CE 14 1 Y 1 A LYS 87 ? NZ ? A LYS 93 NZ 15 1 Y 1 A MET 90 ? CG ? A MET 96 CG 16 1 Y 1 A MET 90 ? SD ? A MET 96 SD 17 1 Y 1 A MET 90 ? CE ? A MET 96 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -5 ? A SER 1 2 1 Y 1 A HIS -4 ? A HIS 2 3 1 Y 1 A HIS -3 ? A HIS 3 4 1 Y 1 A HIS -2 ? A HIS 4 5 1 Y 1 A HIS -1 ? A HIS 5 6 1 Y 1 A HIS 0 ? A HIS 6 7 1 Y 1 A HIS 1 ? A HIS 7 8 1 Y 1 A ALA 2 ? A ALA 8 9 1 Y 1 A GLY 3 ? A GLY 9 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #