HEADER LIGASE/LIGASE INHIBITOR 15-SEP-13 4MQ6 TITLE PANTOTHENATE SYNTHASE IN COMPLEX WITH 2-(5-METHOXY-2-(TOSYLCARBAMOYL)- TITLE 2 1H-INDOL-1-YL)ACETIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PANTOTHENATE SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PS, PANTOATE--BETA-ALANINE LIGASE, PANTOATE-ACTIVATING COMPND 5 ENZYME; COMPND 6 EC: 6.3.2.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA BETA 3-LAYER(ABA) SANDWICH ROSSMANN FOLD, PANTOATE-LIGASE, ATP KEYWDS 2 BINDING, LIGASE, LIGASE-LIGASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.L.SILVESTRE,T.L.BLUNDELL REVDAT 5 28-FEB-24 4MQ6 1 REMARK SEQADV REVDAT 4 29-AUG-18 4MQ6 1 COMPND SOURCE REVDAT 3 15-NOV-17 4MQ6 1 REMARK REVDAT 2 23-NOV-16 4MQ6 1 JRNL REVDAT 1 27-AUG-14 4MQ6 0 JRNL AUTH A.W.HUNG,H.L.SILVESTRE,S.WEN,G.P.GEORGE,J.BOLAND, JRNL AUTH 2 T.L.BLUNDELL,A.CIULLI,C.ABELL JRNL TITL OPTIMIZATION OF INHIBITORS OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 PANTOTHENATE SYNTHETASE BASED ON GROUP EFFICIENCY ANALYSIS. JRNL REF CHEMMEDCHEM V. 11 38 2016 JRNL REFN ISSN 1860-7179 JRNL PMID 26486566 JRNL DOI 10.1002/CMDC.201500414 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 57043 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3033 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4223 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4135 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : 1.26000 REMARK 3 B33 (A**2) : -2.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.48000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.338 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4431 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6060 ; 2.148 ; 2.010 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 585 ; 6.247 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 170 ;38.500 ;22.765 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 649 ;14.634 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;18.841 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 714 ; 0.167 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3406 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2895 ; 1.425 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4647 ; 2.310 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1536 ; 3.510 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1411 ; 5.540 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4MQ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082227. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60099 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.97 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-14% W/V PEG3000, 150 MM LITHIUM REMARK 280 SULFATE, 100 MM IMIDAZOLE, 2% V/V ETHANOL, 10% V/V GLYCEROL, 20 REMARK 280 MM MAGNESIUM CHLORIDE, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.45000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 13.27282 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -80.52344 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 292 REMARK 465 THR A 293 REMARK 465 ASP A 294 REMARK 465 ARG A 295 REMARK 465 PRO A 296 REMARK 465 ASP A 297 REMARK 465 GLY A 298 REMARK 465 TYR A 299 REMARK 465 ARG A 300 REMARK 465 ALA A 301 REMARK 465 ILE A 302 REMARK 465 LEU A 303 REMARK 465 GLU A 304 REMARK 465 SER A 305 REMARK 465 HIS A 306 REMARK 465 TRP A 307 REMARK 465 ARG A 308 REMARK 465 ASN A 309 REMARK 465 MET B 71 REMARK 465 GLN B 72 REMARK 465 PHE B 73 REMARK 465 GLY B 74 REMARK 465 ALA B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 ASP B 78 REMARK 465 LEU B 79 REMARK 465 ASP B 80 REMARK 465 ALA B 81 REMARK 465 TYR B 82 REMARK 465 PRO B 83 REMARK 465 ARG B 84 REMARK 465 THR B 85 REMARK 465 THR B 289 REMARK 465 PHE B 290 REMARK 465 ALA B 291 REMARK 465 GLY B 292 REMARK 465 THR B 293 REMARK 465 ASP B 294 REMARK 465 ARG B 295 REMARK 465 PRO B 296 REMARK 465 ASP B 297 REMARK 465 GLY B 298 REMARK 465 TYR B 299 REMARK 465 ARG B 300 REMARK 465 ALA B 301 REMARK 465 ILE B 302 REMARK 465 LEU B 303 REMARK 465 GLU B 304 REMARK 465 SER B 305 REMARK 465 HIS B 306 REMARK 465 TRP B 307 REMARK 465 ARG B 308 REMARK 465 ASN B 309 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 33 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 151 NH2 ARG B 151 1.90 REMARK 500 O HOH B 692 O HOH B 695 1.96 REMARK 500 O HOH B 583 O HOH B 667 2.10 REMARK 500 O HOH A 582 O HOH A 647 2.13 REMARK 500 O HOH A 719 O HOH B 627 2.14 REMARK 500 O HOH A 606 O HOH A 637 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 56 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 84 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 132 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 278 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG B 32 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG B 56 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 169 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 169 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 188 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 191 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG B 236 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 278 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 75 156.56 -34.30 REMARK 500 THR A 85 58.73 -142.65 REMARK 500 ARG A 115 -91.88 -137.96 REMARK 500 LEU A 127 -121.76 53.80 REMARK 500 ASN A 263 -127.09 -95.07 REMARK 500 ARG B 115 -94.00 -141.71 REMARK 500 LEU B 127 -111.76 59.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 29W A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 29W A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOH A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 29W B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 404 DBREF 4MQ6 A 1 309 UNP P0A5R0 PANC_MYCTU 1 309 DBREF 4MQ6 B 1 309 UNP P0A5R0 PANC_MYCTU 1 309 SEQADV 4MQ6 ALA A 2 UNP P0A5R0 THR 2 ENGINEERED MUTATION SEQADV 4MQ6 GLY A 77 UNP P0A5R0 GLU 77 ENGINEERED MUTATION SEQADV 4MQ6 ALA B 2 UNP P0A5R0 THR 2 ENGINEERED MUTATION SEQADV 4MQ6 GLY B 77 UNP P0A5R0 GLU 77 ENGINEERED MUTATION SEQRES 1 A 309 MET ALA ILE PRO ALA PHE HIS PRO GLY GLU LEU ASN VAL SEQRES 2 A 309 TYR SER ALA PRO GLY ASP VAL ALA ASP VAL SER ARG ALA SEQRES 3 A 309 LEU ARG LEU THR GLY ARG ARG VAL MET LEU VAL PRO THR SEQRES 4 A 309 MET GLY ALA LEU HIS GLU GLY HIS LEU ALA LEU VAL ARG SEQRES 5 A 309 ALA ALA LYS ARG VAL PRO GLY SER VAL VAL VAL VAL SER SEQRES 6 A 309 ILE PHE VAL ASN PRO MET GLN PHE GLY ALA GLY GLY ASP SEQRES 7 A 309 LEU ASP ALA TYR PRO ARG THR PRO ASP ASP ASP LEU ALA SEQRES 8 A 309 GLN LEU ARG ALA GLU GLY VAL GLU ILE ALA PHE THR PRO SEQRES 9 A 309 THR THR ALA ALA MET TYR PRO ASP GLY LEU ARG THR THR SEQRES 10 A 309 VAL GLN PRO GLY PRO LEU ALA ALA GLU LEU GLU GLY GLY SEQRES 11 A 309 PRO ARG PRO THR HIS PHE ALA GLY VAL LEU THR VAL VAL SEQRES 12 A 309 LEU LYS LEU LEU GLN ILE VAL ARG PRO ASP ARG VAL PHE SEQRES 13 A 309 PHE GLY GLU LYS ASP TYR GLN GLN LEU VAL LEU ILE ARG SEQRES 14 A 309 GLN LEU VAL ALA ASP PHE ASN LEU ASP VAL ALA VAL VAL SEQRES 15 A 309 GLY VAL PRO THR VAL ARG GLU ALA ASP GLY LEU ALA MET SEQRES 16 A 309 SER SER ARG ASN ARG TYR LEU ASP PRO ALA GLN ARG ALA SEQRES 17 A 309 ALA ALA VAL ALA LEU SER ALA ALA LEU THR ALA ALA ALA SEQRES 18 A 309 HIS ALA ALA THR ALA GLY ALA GLN ALA ALA LEU ASP ALA SEQRES 19 A 309 ALA ARG ALA VAL LEU ASP ALA ALA PRO GLY VAL ALA VAL SEQRES 20 A 309 ASP TYR LEU GLU LEU ARG ASP ILE GLY LEU GLY PRO MET SEQRES 21 A 309 PRO LEU ASN GLY SER GLY ARG LEU LEU VAL ALA ALA ARG SEQRES 22 A 309 LEU GLY THR THR ARG LEU LEU ASP ASN ILE ALA ILE GLU SEQRES 23 A 309 ILE GLY THR PHE ALA GLY THR ASP ARG PRO ASP GLY TYR SEQRES 24 A 309 ARG ALA ILE LEU GLU SER HIS TRP ARG ASN SEQRES 1 B 309 MET ALA ILE PRO ALA PHE HIS PRO GLY GLU LEU ASN VAL SEQRES 2 B 309 TYR SER ALA PRO GLY ASP VAL ALA ASP VAL SER ARG ALA SEQRES 3 B 309 LEU ARG LEU THR GLY ARG ARG VAL MET LEU VAL PRO THR SEQRES 4 B 309 MET GLY ALA LEU HIS GLU GLY HIS LEU ALA LEU VAL ARG SEQRES 5 B 309 ALA ALA LYS ARG VAL PRO GLY SER VAL VAL VAL VAL SER SEQRES 6 B 309 ILE PHE VAL ASN PRO MET GLN PHE GLY ALA GLY GLY ASP SEQRES 7 B 309 LEU ASP ALA TYR PRO ARG THR PRO ASP ASP ASP LEU ALA SEQRES 8 B 309 GLN LEU ARG ALA GLU GLY VAL GLU ILE ALA PHE THR PRO SEQRES 9 B 309 THR THR ALA ALA MET TYR PRO ASP GLY LEU ARG THR THR SEQRES 10 B 309 VAL GLN PRO GLY PRO LEU ALA ALA GLU LEU GLU GLY GLY SEQRES 11 B 309 PRO ARG PRO THR HIS PHE ALA GLY VAL LEU THR VAL VAL SEQRES 12 B 309 LEU LYS LEU LEU GLN ILE VAL ARG PRO ASP ARG VAL PHE SEQRES 13 B 309 PHE GLY GLU LYS ASP TYR GLN GLN LEU VAL LEU ILE ARG SEQRES 14 B 309 GLN LEU VAL ALA ASP PHE ASN LEU ASP VAL ALA VAL VAL SEQRES 15 B 309 GLY VAL PRO THR VAL ARG GLU ALA ASP GLY LEU ALA MET SEQRES 16 B 309 SER SER ARG ASN ARG TYR LEU ASP PRO ALA GLN ARG ALA SEQRES 17 B 309 ALA ALA VAL ALA LEU SER ALA ALA LEU THR ALA ALA ALA SEQRES 18 B 309 HIS ALA ALA THR ALA GLY ALA GLN ALA ALA LEU ASP ALA SEQRES 19 B 309 ALA ARG ALA VAL LEU ASP ALA ALA PRO GLY VAL ALA VAL SEQRES 20 B 309 ASP TYR LEU GLU LEU ARG ASP ILE GLY LEU GLY PRO MET SEQRES 21 B 309 PRO LEU ASN GLY SER GLY ARG LEU LEU VAL ALA ALA ARG SEQRES 22 B 309 LEU GLY THR THR ARG LEU LEU ASP ASN ILE ALA ILE GLU SEQRES 23 B 309 ILE GLY THR PHE ALA GLY THR ASP ARG PRO ASP GLY TYR SEQRES 24 B 309 ARG ALA ILE LEU GLU SER HIS TRP ARG ASN HET EOH A 401 3 HET EOH A 402 3 HET EOH A 403 3 HET 29W A 404 28 HET 29W A 405 28 HET EDO A 406 4 HET EOH A 407 3 HET EOH A 408 3 HET EOH A 409 3 HET EOH A 410 3 HET EOH A 411 3 HET 29W B 401 28 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HETNAM EOH ETHANOL HETNAM 29W (5-METHOXY-2-{[(4-METHYLPHENYL)SULFONYL]CARBAMOYL}-1H- HETNAM 2 29W INDOL-1-YL)ACETIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN 29W 2-(5-METHOXY-2-(TOSYLCARBAMOYL)-1H-INDOL-1-YL)ACETIC HETSYN 2 29W ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EOH 8(C2 H6 O) FORMUL 6 29W 3(C19 H18 N2 O6 S) FORMUL 8 EDO 4(C2 H6 O2) FORMUL 18 HOH *480(H2 O) HELIX 1 1 ALA A 16 THR A 30 1 15 HELIX 2 2 HIS A 44 ARG A 56 1 13 HELIX 3 3 ASN A 69 PHE A 73 5 5 HELIX 4 4 GLY A 77 TYR A 82 1 6 HELIX 5 5 THR A 85 GLU A 96 1 12 HELIX 6 6 THR A 105 TYR A 110 1 6 HELIX 7 7 GLY A 121 GLY A 130 5 10 HELIX 8 8 THR A 134 ARG A 151 1 18 HELIX 9 9 ASP A 161 PHE A 175 1 15 HELIX 10 10 ARG A 198 LEU A 202 5 5 HELIX 11 11 ASP A 203 ALA A 210 1 8 HELIX 12 12 VAL A 211 ALA A 224 1 14 HELIX 13 13 GLY A 227 ALA A 241 1 15 HELIX 14 14 GLY A 288 ALA A 291 5 4 HELIX 15 15 ALA B 16 THR B 30 1 15 HELIX 16 16 HIS B 44 ARG B 56 1 13 HELIX 17 17 ASP B 87 GLU B 96 1 10 HELIX 18 18 THR B 105 TYR B 110 1 6 HELIX 19 19 GLY B 121 GLY B 130 5 10 HELIX 20 20 THR B 134 ARG B 151 1 18 HELIX 21 21 ASP B 161 PHE B 175 1 15 HELIX 22 22 SER B 196 LEU B 202 5 7 HELIX 23 23 ASP B 203 VAL B 211 1 9 HELIX 24 24 VAL B 211 ALA B 224 1 14 HELIX 25 25 GLY B 227 ALA B 241 1 15 SHEET 1 A 6 ASN A 12 TYR A 14 0 SHEET 2 A 6 ILE A 100 PHE A 102 1 O ALA A 101 N TYR A 14 SHEET 3 A 6 SER A 60 ILE A 66 1 N VAL A 64 O ILE A 100 SHEET 4 A 6 ARG A 33 THR A 39 1 N MET A 35 O VAL A 63 SHEET 5 A 6 ARG A 154 GLY A 158 1 O PHE A 156 N LEU A 36 SHEET 6 A 6 ALA A 180 VAL A 184 1 O VAL A 182 N VAL A 155 SHEET 1 B 2 THR A 117 GLN A 119 0 SHEET 2 B 2 THR B 117 GLN B 119 -1 O GLN B 119 N THR A 117 SHEET 1 C 3 VAL A 245 ASP A 254 0 SHEET 2 C 3 SER A 265 LEU A 274 -1 O LEU A 269 N GLU A 251 SHEET 3 C 3 THR A 277 GLU A 286 -1 O ILE A 285 N GLY A 266 SHEET 1 D 6 ASN B 12 TYR B 14 0 SHEET 2 D 6 ILE B 100 PHE B 102 1 O ALA B 101 N ASN B 12 SHEET 3 D 6 SER B 60 ILE B 66 1 N VAL B 64 O PHE B 102 SHEET 4 D 6 ARG B 33 THR B 39 1 N MET B 35 O VAL B 63 SHEET 5 D 6 ARG B 154 GLY B 158 1 O ARG B 154 N LEU B 36 SHEET 6 D 6 ALA B 180 VAL B 184 1 O VAL B 182 N VAL B 155 SHEET 1 E 3 ALA B 246 ASP B 254 0 SHEET 2 E 3 GLY B 264 LEU B 274 -1 O LEU B 269 N GLU B 251 SHEET 3 E 3 THR B 277 ILE B 287 -1 O LEU B 279 N ALA B 272 SITE 1 AC1 6 ARG A 115 THR A 117 29W A 405 GLN B 119 SITE 2 AC1 6 PRO B 120 HOH B 506 SITE 1 AC2 4 THR A 218 HOH A 726 HIS B 222 THR B 225 SITE 1 AC3 4 ASN A 176 HOH A 620 HOH A 732 ALA B 21 SITE 1 AC4 20 PRO A 38 THR A 39 MET A 40 HIS A 44 SITE 2 AC4 20 GLY A 46 HIS A 47 TYR A 82 PHE A 157 SITE 3 AC4 20 LYS A 160 ASP A 161 GLN A 164 PRO A 185 SITE 4 AC4 20 THR A 186 VAL A 187 MET A 195 SER A 196 SITE 5 AC4 20 SER A 197 EOH A 410 HOH A 658 HOH A 730 SITE 1 AC5 14 MET A 71 LEU A 114 PRO A 133 THR A 134 SITE 2 AC5 14 GLY A 138 EOH A 401 ILE B 3 PRO B 4 SITE 3 AC5 14 PHE B 6 PRO B 8 LEU B 27 THR B 30 SITE 4 AC5 14 ARG B 32 GLN B 119 SITE 1 AC6 6 MET A 109 TYR A 110 ARG A 115 THR A 116 SITE 2 AC6 6 LYS A 145 ASP B 174 SITE 1 AC7 4 GLU A 189 ALA A 190 GLY A 192 HOH A 632 SITE 1 AC8 7 TYR A 82 PRO A 83 ARG A 84 HOH A 587 SITE 2 AC8 7 HOH A 611 HOH A 664 HOH A 727 SITE 1 AC9 6 GLN A 148 ARG A 151 GLN B 148 ASP B 178 SITE 2 AC9 6 VAL B 179 HOH B 540 SITE 1 BC1 5 MET A 40 GLN A 72 VAL A 142 29W A 404 SITE 2 BC1 5 HOH A 585 SITE 1 BC2 6 ALA A 226 ALA B 208 ALA B 242 PRO B 243 SITE 2 BC2 6 HOH B 604 HOH B 605 SITE 1 BC3 16 PRO B 38 THR B 39 MET B 40 HIS B 44 SITE 2 BC3 16 GLY B 46 HIS B 47 ASP B 161 GLN B 164 SITE 3 BC3 16 PRO B 185 VAL B 187 MET B 195 SER B 196 SITE 4 BC3 16 SER B 197 EDO B 404 HOH B 710 HOH B 715 SITE 1 BC4 9 ASP A 174 MET B 109 TYR B 110 GLY B 113 SITE 2 BC4 9 LEU B 114 ARG B 115 THR B 116 LYS B 145 SITE 3 BC4 9 HOH B 533 SITE 1 BC5 4 GLY B 244 ALA B 246 ARG B 273 GLY B 275 SITE 1 BC6 4 PHE B 67 VAL B 142 29W B 401 HOH B 534 CRYST1 48.540 70.900 81.610 90.00 99.36 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020602 0.000000 0.003396 0.00000 SCALE2 0.000000 0.014104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012419 0.00000