HEADER APOPTOSIS INHIBITOR 19-SEP-13 4MTI TITLE CRYSTAL STRUCTURE OF CIAP1 BIR3 BOUND TO T3258042 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BIR3 (UNP RESIDUES 260-352); COMPND 5 SYNONYM: C-IAP1, IAP HOMOLOG B, INHIBITOR OF APOPTOSIS PROTEIN 2, COMPND 6 IAP-2, HIAP-2, HIAP2, RING FINGER PROTEIN 48, TNFR2-TRAF-SIGNALING COMPND 7 COMPLEX PROTEIN 2; COMPND 8 EC: 6.3.2.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: API1, BIRC2, IAP2, MIHB, RNF48; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BI21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS RING-TYPE ZINC FINGER, LIGASE, APOPTOSIS INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR G.P.SNELL,D.R.DOUGAN REVDAT 2 28-FEB-24 4MTI 1 REMARK SEQADV LINK REVDAT 1 11-DEC-13 4MTI 0 JRNL AUTH Z.SHIOKAWA,K.HASHIMOTO,B.SAITO,Y.OGURO,H.SUMI,M.YABUKI, JRNL AUTH 2 M.YOSHIMATSU,Y.KOSUGI,Y.DEBORI,N.MORISHITA,D.R.DOUGAN, JRNL AUTH 3 G.P.SNELL,S.YOSHIDA,T.ISHIKAWA JRNL TITL DESIGN, SYNTHESIS, AND BIOLOGICAL ACTIVITIES OF NOVEL JRNL TITL 2 HEXAHYDROPYRAZINO[1,2-A]INDOLE DERIVATIVES AS POTENT JRNL TITL 3 INHIBITORS OF APOPTOSIS (IAP) PROTEINS ANTAGONISTS WITH JRNL TITL 4 IMPROVED MEMBRANE PERMEABILITY ACROSS MDR1 EXPRESSING CELLS. JRNL REF BIOORG.MED.CHEM. V. 21 7938 2013 JRNL REFN ISSN 0968-0896 JRNL PMID 24169315 JRNL DOI 10.1016/J.BMC.2013.09.067 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 13442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 724 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 815 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1508 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.17000 REMARK 3 B22 (A**2) : -3.22000 REMARK 3 B33 (A**2) : 5.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.223 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.369 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.869 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1660 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1128 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2246 ; 1.235 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2692 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ; 4.727 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;31.293 ;22.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 253 ;15.165 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;14.308 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 214 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1825 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 388 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 255 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1886 17.9381 26.3933 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.0351 REMARK 3 T33: 0.0991 T12: 0.0026 REMARK 3 T13: -0.0532 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.6703 L22: 3.9847 REMARK 3 L33: 3.7826 L12: 0.6497 REMARK 3 L13: 1.3545 L23: 1.9075 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: 0.0772 S13: 0.1162 REMARK 3 S21: -0.2509 S22: 0.0318 S23: 0.1046 REMARK 3 S31: -0.1277 S32: -0.0380 S33: 0.0943 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 257 B 346 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3566 27.6562 48.8844 REMARK 3 T TENSOR REMARK 3 T11: 0.0242 T22: 0.1326 REMARK 3 T33: 0.0891 T12: -0.0244 REMARK 3 T13: -0.0369 T23: 0.0574 REMARK 3 L TENSOR REMARK 3 L11: 2.1896 L22: 6.5433 REMARK 3 L33: 5.3540 L12: 0.0509 REMARK 3 L13: -0.3000 L23: -4.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.2147 S13: -0.1709 REMARK 3 S21: 0.2254 S22: -0.2661 S23: -0.1274 REMARK 3 S31: -0.2261 S32: 0.3316 S33: 0.2890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4MTI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SINGLE-CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14267 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8M NA CL, 0.06M TRIS_BASE, 0.04M REMARK 280 TRIS CL, PH 8.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.56850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.18650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.23800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.18650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.56850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.23800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 232 REMARK 465 GLY A 233 REMARK 465 SER A 234 REMARK 465 SER A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 SER A 242 REMARK 465 SER A 243 REMARK 465 GLY A 244 REMARK 465 GLU A 245 REMARK 465 ASN A 246 REMARK 465 LEU A 247 REMARK 465 TYR A 248 REMARK 465 PHE A 249 REMARK 465 GLN A 250 REMARK 465 GLY A 251 REMARK 465 GLY A 252 REMARK 465 MET B 232 REMARK 465 GLY B 233 REMARK 465 SER B 234 REMARK 465 SER B 235 REMARK 465 HIS B 236 REMARK 465 HIS B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 SER B 242 REMARK 465 SER B 243 REMARK 465 GLY B 244 REMARK 465 GLU B 245 REMARK 465 ASN B 246 REMARK 465 LEU B 247 REMARK 465 TYR B 248 REMARK 465 PHE B 249 REMARK 465 GLN B 250 REMARK 465 GLY B 251 REMARK 465 GLY B 252 REMARK 465 SER B 253 REMARK 465 SER B 254 REMARK 465 ILE B 255 REMARK 465 SER B 256 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 299 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 315 O HOH A 551 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 295 -131.28 55.55 REMARK 500 ASN B 295 -121.28 50.35 REMARK 500 CYS B 302 -61.54 -91.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 300 SG REMARK 620 2 CYS A 303 SG 109.6 REMARK 620 3 HIS A 320 NE2 100.3 117.0 REMARK 620 4 CYS A 327 SG 112.0 110.6 107.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 300 SG REMARK 620 2 CYS B 303 SG 108.8 REMARK 620 3 HIS B 320 NE2 101.9 116.3 REMARK 620 4 CYS B 327 SG 113.3 110.8 105.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2DX A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2DX B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MU7 RELATED DB: PDB DBREF 4MTI A 254 346 UNP Q13490 BIRC2_HUMAN 260 352 DBREF 4MTI B 254 346 UNP Q13490 BIRC2_HUMAN 260 352 SEQADV 4MTI MET A 232 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY A 233 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER A 234 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER A 235 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 236 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 237 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 238 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 239 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 240 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS A 241 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER A 242 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER A 243 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY A 244 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLU A 245 UNP Q13490 EXPRESSION TAG SEQADV 4MTI ASN A 246 UNP Q13490 EXPRESSION TAG SEQADV 4MTI LEU A 247 UNP Q13490 EXPRESSION TAG SEQADV 4MTI TYR A 248 UNP Q13490 EXPRESSION TAG SEQADV 4MTI PHE A 249 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLN A 250 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY A 251 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY A 252 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER A 253 UNP Q13490 EXPRESSION TAG SEQADV 4MTI MET B 232 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY B 233 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER B 234 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER B 235 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 236 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 237 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 238 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 239 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 240 UNP Q13490 EXPRESSION TAG SEQADV 4MTI HIS B 241 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER B 242 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER B 243 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY B 244 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLU B 245 UNP Q13490 EXPRESSION TAG SEQADV 4MTI ASN B 246 UNP Q13490 EXPRESSION TAG SEQADV 4MTI LEU B 247 UNP Q13490 EXPRESSION TAG SEQADV 4MTI TYR B 248 UNP Q13490 EXPRESSION TAG SEQADV 4MTI PHE B 249 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLN B 250 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY B 251 UNP Q13490 EXPRESSION TAG SEQADV 4MTI GLY B 252 UNP Q13490 EXPRESSION TAG SEQADV 4MTI SER B 253 UNP Q13490 EXPRESSION TAG SEQRES 1 A 115 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 115 GLU ASN LEU TYR PHE GLN GLY GLY SER SER ILE SER ASN SEQRES 3 A 115 LEU SER MET GLN THR HIS ALA ALA ARG MET ARG THR PHE SEQRES 4 A 115 MET TYR TRP PRO SER SER VAL PRO VAL GLN PRO GLU GLN SEQRES 5 A 115 LEU ALA SER ALA GLY PHE TYR TYR VAL GLY ARG ASN ASP SEQRES 6 A 115 ASP VAL LYS CYS PHE CYS CYS ASP GLY GLY LEU ARG CYS SEQRES 7 A 115 TRP GLU SER GLY ASP ASP PRO TRP VAL GLU HIS ALA LYS SEQRES 8 A 115 TRP PHE PRO ARG CYS GLU PHE LEU ILE ARG MET LYS GLY SEQRES 9 A 115 GLN GLU PHE VAL ASP GLU ILE GLN GLY ARG TYR SEQRES 1 B 115 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 115 GLU ASN LEU TYR PHE GLN GLY GLY SER SER ILE SER ASN SEQRES 3 B 115 LEU SER MET GLN THR HIS ALA ALA ARG MET ARG THR PHE SEQRES 4 B 115 MET TYR TRP PRO SER SER VAL PRO VAL GLN PRO GLU GLN SEQRES 5 B 115 LEU ALA SER ALA GLY PHE TYR TYR VAL GLY ARG ASN ASP SEQRES 6 B 115 ASP VAL LYS CYS PHE CYS CYS ASP GLY GLY LEU ARG CYS SEQRES 7 B 115 TRP GLU SER GLY ASP ASP PRO TRP VAL GLU HIS ALA LYS SEQRES 8 B 115 TRP PHE PRO ARG CYS GLU PHE LEU ILE ARG MET LYS GLY SEQRES 9 B 115 GLN GLU PHE VAL ASP GLU ILE GLN GLY ARG TYR HET ZN A 401 1 HET 2DX A 402 39 HET ZN B 401 1 HET 2DX B 402 39 HETNAM ZN ZINC ION HETNAM 2DX (3S,8AR)-2-[(2S)-2-CYCLOHEXYL-2-{[(2S)-2-(METHYLAMINO) HETNAM 2 2DX BUTANOYL]AMINO}ACETYL]-N-[(4R)-3,4-DIHYDRO-2H-CHROMEN- HETNAM 3 2DX 4-YL]OCTAHYDROPYRROLO[1,2-A]PYRAZINE-3-CARBOXAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 2DX 2(C30 H45 N5 O4) FORMUL 7 HOH *124(H2 O) HELIX 1 1 ASN A 257 GLN A 261 5 5 HELIX 2 2 THR A 262 THR A 269 1 8 HELIX 3 3 PHE A 270 TRP A 273 5 4 HELIX 4 4 GLN A 280 ALA A 287 1 8 HELIX 5 5 ASP A 315 PHE A 324 1 10 HELIX 6 6 CYS A 327 GLY A 335 1 9 HELIX 7 7 GLY A 335 GLY A 344 1 10 HELIX 8 8 ASN B 257 GLN B 261 5 5 HELIX 9 9 THR B 262 THR B 269 1 8 HELIX 10 10 PHE B 270 TRP B 273 5 4 HELIX 11 11 GLN B 280 ALA B 287 1 8 HELIX 12 12 ASP B 315 PHE B 324 1 10 HELIX 13 13 CYS B 327 GLN B 343 1 17 SHEET 1 A 3 PHE A 289 TYR A 291 0 SHEET 2 A 3 VAL A 298 CYS A 300 -1 O LYS A 299 N TYR A 290 SHEET 3 A 3 GLY A 306 LEU A 307 -1 O LEU A 307 N VAL A 298 SHEET 1 B 3 PHE B 289 TYR B 291 0 SHEET 2 B 3 VAL B 298 CYS B 300 -1 O LYS B 299 N TYR B 290 SHEET 3 B 3 GLY B 306 LEU B 307 -1 O LEU B 307 N VAL B 298 LINK SG CYS A 300 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 303 ZN ZN A 401 1555 1555 2.40 LINK NE2 HIS A 320 ZN ZN A 401 1555 1555 2.12 LINK SG CYS A 327 ZN ZN A 401 1555 1555 2.36 LINK SG CYS B 300 ZN ZN B 401 1555 1555 2.39 LINK SG CYS B 303 ZN ZN B 401 1555 1555 2.25 LINK NE2 HIS B 320 ZN ZN B 401 1555 1555 2.00 LINK SG CYS B 327 ZN ZN B 401 1555 1555 2.31 SITE 1 AC1 4 CYS A 300 CYS A 303 HIS A 320 CYS A 327 SITE 1 AC2 14 ASP A 297 VAL A 298 GLY A 306 LEU A 307 SITE 2 AC2 14 ARG A 308 CYS A 309 TRP A 310 GLU A 311 SITE 3 AC2 14 ASP A 314 TRP A 323 HOH A 511 HOH A 528 SITE 4 AC2 14 HOH A 531 HOH A 575 SITE 1 AC3 4 CYS B 300 CYS B 303 HIS B 320 CYS B 327 SITE 1 AC4 10 ARG A 268 MET A 271 GLN B 261 GLY B 306 SITE 2 AC4 10 LEU B 307 ARG B 308 CYS B 309 ASP B 314 SITE 3 AC4 10 GLU B 319 HOH B 541 CRYST1 31.137 68.476 122.373 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032116 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008172 0.00000