HEADER HYDROLASE 20-SEP-13 4MU9 TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSYLHYDROLASE (BT_3782) FROM TITLE 2 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.89 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSIDE HYDROLASE FAMILY 73; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: VPI-5482; SOURCE 5 GENE: BT_3782; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS GLYCOSYL HYDROLASE FAMILY 76, PF03663 FAMILY, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4MU9 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4MU9 1 JRNL REVDAT 2 15-NOV-17 4MU9 1 REMARK REVDAT 1 09-OCT-13 4MU9 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSYLHYDROLASE (BT_3782) JRNL TITL 2 FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.89 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 76.5 REMARK 3 NUMBER OF REFLECTIONS : 42441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 2203 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.94 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.46 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 945 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2013 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 894 REMARK 3 BIN R VALUE (WORKING SET) : 0.1997 REMARK 3 BIN FREE R VALUE : 0.2292 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 51 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5852 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 707 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.33220 REMARK 3 B22 (A**2) : -3.82330 REMARK 3 B33 (A**2) : 0.49110 REMARK 3 B12 (A**2) : -2.35020 REMARK 3 B13 (A**2) : -0.55590 REMARK 3 B23 (A**2) : 4.72170 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.202 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6178 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8349 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2143 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 150 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 884 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6178 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 747 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 2 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : 2 ; 1.000 ; HARMONIC REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7685 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.94 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.09 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.78 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|25-387 } REMARK 3 ORIGIN FOR THE GROUP (A): 9.1198 6.6893 6.9852 REMARK 3 T TENSOR REMARK 3 T11: -0.0450 T22: -0.0003 REMARK 3 T33: -0.0257 T12: 0.0137 REMARK 3 T13: -0.0010 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 0.3117 L22: 0.4163 REMARK 3 L33: 0.3137 L12: -0.0502 REMARK 3 L13: 0.1239 L23: 0.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: -0.0300 S13: 0.0724 REMARK 3 S21: -0.0323 S22: -0.0070 S23: -0.0198 REMARK 3 S31: 0.0151 S32: 0.0209 S33: 0.0120 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|25-387 } REMARK 3 ORIGIN FOR THE GROUP (A): 10.4275 -19.5420 37.5141 REMARK 3 T TENSOR REMARK 3 T11: -0.0365 T22: 0.0081 REMARK 3 T33: -0.0258 T12: 0.0177 REMARK 3 T13: -0.0014 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 0.2588 L22: 0.2798 REMARK 3 L33: 0.2286 L12: -0.0369 REMARK 3 L13: -0.0621 L23: 0.0975 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.0287 S13: -0.0614 REMARK 3 S21: 0.0026 S22: -0.0292 S23: 0.0016 REMARK 3 S31: 0.0040 S32: -0.0129 S33: 0.0037 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS REMARK 3 DURING REFINEMENT. 4. NCS RESTRAINTS WERE IMPOSED BY AUTOBUSTER' REMARK 3 S LSSR PROCEDURE (-AUTONCS) 5. EDO (ETHYLENE GLYCOL) AND EPE REMARK 3 (HEPES) LIGANDS FROM CRYO- AND CRYS CONDITIONS ARE MODELED INT REMARK 3 THE STRUCTURE. 6. THERE IS DISORDERED LOOP IN THE MODELED REMARK 3 STRUCTURE 67-70. REMARK 4 REMARK 4 4MU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082372. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97947,0.97876 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42443 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 28.033 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 69.0 REMARK 200 DATA REDUNDANCY : 1.940 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 23.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.00% POLYETHYLENE GLYCOL 10000, REMARK 280 8.00% ETHYLENE GLYCOL, 0.1M HEPES PH 7.5, 0.005M MANNAN, REMARK 280 NANODROP', VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 67 REMARK 465 ALA A 68 REMARK 465 GLN A 69 REMARK 465 GLN A 70 REMARK 465 GLY B 67 REMARK 465 ALA B 68 REMARK 465 GLN B 69 REMARK 465 GLN B 70 REMARK 465 ASN B 71 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 217 CD CE NZ REMARK 470 ARG A 282 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 60 CD CE NZ REMARK 470 LYS B 278 CD CE NZ REMARK 470 GLU B 366 CD OE1 OE2 REMARK 470 LYS B 387 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 48 -166.64 -118.88 REMARK 500 LEU B 48 -166.65 -117.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 410 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-396216 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 25-387 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4MU9 A 25 387 UNP Q8A184 Q8A184_BACTN 25 387 DBREF 4MU9 B 25 387 UNP Q8A184 Q8A184_BACTN 25 387 SEQADV 4MU9 GLY A 0 UNP Q8A184 EXPRESSION TAG SEQADV 4MU9 GLY B 0 UNP Q8A184 EXPRESSION TAG SEQRES 1 A 364 GLY HIS PRO PHE VAL SER ILE ALA ASP SER ILE LEU ASP SEQRES 2 A 364 ASN VAL LEU ASN LEU TYR GLN THR GLU ASP GLY LEU LEU SEQRES 3 A 364 THR GLU THR TYR PRO VAL ASN PRO ASP GLN LYS ILE THR SEQRES 4 A 364 TYR LEU ALA GLY GLY ALA GLN GLN ASN GLY THR LEU LYS SEQRES 5 A 364 ALA SER PHE LEU TRP PRO TYR SER GLY MSE MSE SER GLY SEQRES 6 A 364 CYS VAL ALA MSE TYR GLN ALA THR GLY ASP LYS LYS TYR SEQRES 7 A 364 LYS THR ILE LEU GLU LYS ARG ILE LEU PRO GLY LEU GLU SEQRES 8 A 364 GLN TYR TRP ASP GLY GLU ARG LEU PRO ALA CYS TYR GLN SEQRES 9 A 364 SER TYR PRO VAL LYS TYR GLY GLN HIS GLY ARG TYR TYR SEQRES 10 A 364 ASP ASP ASN ILE TRP ILE ALA LEU ASP TYR CYS ASP TYR SEQRES 11 A 364 TYR ARG LEU THR LYS LYS ALA ASP TYR LEU LYS LYS ALA SEQRES 12 A 364 ILE ALA LEU TYR GLU TYR ILE TYR SER GLY TRP SER ASP SEQRES 13 A 364 GLU LEU GLY GLY GLY ILE PHE TRP CYS GLU GLN GLN LYS SEQRES 14 A 364 GLU ALA LYS HIS THR CYS SER ASN ALA PRO SER THR VAL SEQRES 15 A 364 LEU GLY VAL LYS LEU TYR ARG LEU THR LYS ASP LYS LYS SEQRES 16 A 364 TYR LEU ASN LYS ALA LYS GLU THR TYR ALA TRP THR ARG SEQRES 17 A 364 LYS HIS LEU CYS ASP PRO ASP ASP PHE LEU TYR TRP ASP SEQRES 18 A 364 ASN ILE ASN LEU LYS GLY LYS VAL SER LYS ASP LYS TYR SEQRES 19 A 364 ALA TYR ASN SER GLY GLN MSE ILE GLN ALA GLY VAL LEU SEQRES 20 A 364 LEU TYR GLU GLU THR GLY ASP LYS ASP TYR LEU ARG ASP SEQRES 21 A 364 ALA GLN LYS THR ALA ALA GLY THR ASP ALA PHE PHE ARG SEQRES 22 A 364 SER LYS ALA ASP LYS LYS ASP PRO SER VAL LYS VAL HIS SEQRES 23 A 364 LYS ASP MSE SER TRP PHE ASN VAL ILE LEU PHE ARG GLY SEQRES 24 A 364 PHE LYS ALA LEU GLU LYS ILE ASP HIS ASN PRO THR TYR SEQRES 25 A 364 VAL ARG ALA MSE ALA GLU ASN ALA LEU HIS ALA TRP ARG SEQRES 26 A 364 ASN TYR ARG ASP ALA ASN GLY LEU LEU GLY ARG ASP TRP SEQRES 27 A 364 SER GLY HIS ASN GLU GLU PRO TYR LYS TRP LEU LEU ASP SEQRES 28 A 364 ASN ALA CYS LEU ILE GLU LEU PHE ALA GLU ILE GLU LYS SEQRES 1 B 364 GLY HIS PRO PHE VAL SER ILE ALA ASP SER ILE LEU ASP SEQRES 2 B 364 ASN VAL LEU ASN LEU TYR GLN THR GLU ASP GLY LEU LEU SEQRES 3 B 364 THR GLU THR TYR PRO VAL ASN PRO ASP GLN LYS ILE THR SEQRES 4 B 364 TYR LEU ALA GLY GLY ALA GLN GLN ASN GLY THR LEU LYS SEQRES 5 B 364 ALA SER PHE LEU TRP PRO TYR SER GLY MSE MSE SER GLY SEQRES 6 B 364 CYS VAL ALA MSE TYR GLN ALA THR GLY ASP LYS LYS TYR SEQRES 7 B 364 LYS THR ILE LEU GLU LYS ARG ILE LEU PRO GLY LEU GLU SEQRES 8 B 364 GLN TYR TRP ASP GLY GLU ARG LEU PRO ALA CYS TYR GLN SEQRES 9 B 364 SER TYR PRO VAL LYS TYR GLY GLN HIS GLY ARG TYR TYR SEQRES 10 B 364 ASP ASP ASN ILE TRP ILE ALA LEU ASP TYR CYS ASP TYR SEQRES 11 B 364 TYR ARG LEU THR LYS LYS ALA ASP TYR LEU LYS LYS ALA SEQRES 12 B 364 ILE ALA LEU TYR GLU TYR ILE TYR SER GLY TRP SER ASP SEQRES 13 B 364 GLU LEU GLY GLY GLY ILE PHE TRP CYS GLU GLN GLN LYS SEQRES 14 B 364 GLU ALA LYS HIS THR CYS SER ASN ALA PRO SER THR VAL SEQRES 15 B 364 LEU GLY VAL LYS LEU TYR ARG LEU THR LYS ASP LYS LYS SEQRES 16 B 364 TYR LEU ASN LYS ALA LYS GLU THR TYR ALA TRP THR ARG SEQRES 17 B 364 LYS HIS LEU CYS ASP PRO ASP ASP PHE LEU TYR TRP ASP SEQRES 18 B 364 ASN ILE ASN LEU LYS GLY LYS VAL SER LYS ASP LYS TYR SEQRES 19 B 364 ALA TYR ASN SER GLY GLN MSE ILE GLN ALA GLY VAL LEU SEQRES 20 B 364 LEU TYR GLU GLU THR GLY ASP LYS ASP TYR LEU ARG ASP SEQRES 21 B 364 ALA GLN LYS THR ALA ALA GLY THR ASP ALA PHE PHE ARG SEQRES 22 B 364 SER LYS ALA ASP LYS LYS ASP PRO SER VAL LYS VAL HIS SEQRES 23 B 364 LYS ASP MSE SER TRP PHE ASN VAL ILE LEU PHE ARG GLY SEQRES 24 B 364 PHE LYS ALA LEU GLU LYS ILE ASP HIS ASN PRO THR TYR SEQRES 25 B 364 VAL ARG ALA MSE ALA GLU ASN ALA LEU HIS ALA TRP ARG SEQRES 26 B 364 ASN TYR ARG ASP ALA ASN GLY LEU LEU GLY ARG ASP TRP SEQRES 27 B 364 SER GLY HIS ASN GLU GLU PRO TYR LYS TRP LEU LEU ASP SEQRES 28 B 364 ASN ALA CYS LEU ILE GLU LEU PHE ALA GLU ILE GLU LYS MODRES 4MU9 MSE A 85 MET SELENOMETHIONINE MODRES 4MU9 MSE A 86 MET SELENOMETHIONINE MODRES 4MU9 MSE A 92 MET SELENOMETHIONINE MODRES 4MU9 MSE A 264 MET SELENOMETHIONINE MODRES 4MU9 MSE A 312 MET SELENOMETHIONINE MODRES 4MU9 MSE A 339 MET SELENOMETHIONINE MODRES 4MU9 MSE B 85 MET SELENOMETHIONINE MODRES 4MU9 MSE B 86 MET SELENOMETHIONINE MODRES 4MU9 MSE B 92 MET SELENOMETHIONINE MODRES 4MU9 MSE B 264 MET SELENOMETHIONINE MODRES 4MU9 MSE B 312 MET SELENOMETHIONINE MODRES 4MU9 MSE B 339 MET SELENOMETHIONINE HET MSE A 85 8 HET MSE A 86 8 HET MSE A 92 13 HET MSE A 264 8 HET MSE A 312 8 HET MSE A 339 8 HET MSE B 85 8 HET MSE B 86 8 HET MSE B 92 16 HET MSE B 264 8 HET MSE B 312 8 HET MSE B 339 8 HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EPE A 408 15 HET EDO B 401 4 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET EDO B 407 4 HET EDO B 408 4 HET EDO B 409 4 HET EPE B 410 15 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN EPE HEPES FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 EDO 16(C2 H6 O2) FORMUL 10 EPE 2(C8 H18 N2 O4 S) FORMUL 21 HOH *707(H2 O) HELIX 1 1 PHE A 27 GLN A 43 1 17 HELIX 2 2 PHE A 78 GLY A 97 1 20 HELIX 3 3 ASP A 98 ARG A 108 1 11 HELIX 4 4 ARG A 108 GLN A 115 1 8 HELIX 5 5 PRO A 130 GLY A 134 5 5 HELIX 6 6 TYR A 139 LYS A 158 1 20 HELIX 7 7 LYS A 159 SER A 175 1 17 HELIX 8 8 ASP A 179 GLY A 183 5 5 HELIX 9 9 THR A 197 LYS A 215 1 19 HELIX 10 10 ASP A 216 CYS A 235 1 20 HELIX 11 11 TYR A 257 GLY A 276 1 20 HELIX 12 12 ASP A 277 PHE A 295 1 19 HELIX 13 13 MSE A 312 HIS A 331 1 20 HELIX 14 14 PRO A 333 TYR A 350 1 18 HELIX 15 15 LEU A 372 ILE A 385 1 14 HELIX 16 16 PHE B 27 GLN B 43 1 17 HELIX 17 17 PHE B 78 GLY B 97 1 20 HELIX 18 18 ASP B 98 ARG B 108 1 11 HELIX 19 19 ARG B 108 GLU B 114 1 7 HELIX 20 20 PRO B 130 GLY B 134 5 5 HELIX 21 21 TYR B 139 LYS B 158 1 20 HELIX 22 22 LYS B 159 SER B 175 1 17 HELIX 23 23 ASP B 179 GLY B 183 5 5 HELIX 24 24 THR B 197 LYS B 215 1 19 HELIX 25 25 ASP B 216 CYS B 235 1 20 HELIX 26 26 TYR B 257 GLY B 276 1 20 HELIX 27 27 ASP B 277 PHE B 295 1 19 HELIX 28 28 MSE B 312 HIS B 331 1 20 HELIX 29 29 PRO B 333 TYR B 350 1 18 HELIX 30 30 LEU B 372 ILE B 385 1 14 SHEET 1 A 2 THR A 52 TYR A 53 0 SHEET 2 A 2 LYS A 370 TRP A 371 -1 O LYS A 370 N TYR A 53 SHEET 1 B 2 TRP A 117 ASP A 118 0 SHEET 2 B 2 CYS A 125 TYR A 126 -1 O CYS A 125 N ASP A 118 SHEET 1 C 3 ALA A 194 HIS A 196 0 SHEET 2 C 3 ASN A 245 ASN A 247 -1 O ILE A 246 N LYS A 195 SHEET 3 C 3 VAL A 252 SER A 253 -1 O SER A 253 N ASN A 245 SHEET 1 D 2 ARG A 296 ALA A 299 0 SHEET 2 D 2 LYS A 307 HIS A 309 -1 O VAL A 308 N LYS A 298 SHEET 1 E 2 THR B 52 TYR B 53 0 SHEET 2 E 2 LYS B 370 TRP B 371 -1 O LYS B 370 N TYR B 53 SHEET 1 F 2 TRP B 117 ASP B 118 0 SHEET 2 F 2 CYS B 125 TYR B 126 -1 O CYS B 125 N ASP B 118 SHEET 1 G 4 PHE B 186 CYS B 188 0 SHEET 2 G 4 GLN B 191 HIS B 196 -1 O GLN B 191 N CYS B 188 SHEET 3 G 4 ASN B 245 ASN B 247 -1 O ILE B 246 N LYS B 195 SHEET 4 G 4 VAL B 252 SER B 253 -1 O SER B 253 N ASN B 245 SHEET 1 H 2 ARG B 296 ALA B 299 0 SHEET 2 H 2 LYS B 307 HIS B 309 -1 O VAL B 308 N LYS B 298 LINK C GLY A 84 N MSE A 85 1555 1555 1.36 LINK C MSE A 85 N MSE A 86 1555 1555 1.35 LINK C MSE A 86 N SER A 87 1555 1555 1.36 LINK C ALA A 91 N MSE A 92 1555 1555 1.35 LINK C MSE A 92 N TYR A 93 1555 1555 1.35 LINK C GLN A 263 N MSE A 264 1555 1555 1.35 LINK C MSE A 264 N ILE A 265 1555 1555 1.36 LINK C ASP A 311 N MSE A 312 1555 1555 1.37 LINK C MSE A 312 N ASER A 313 1555 1555 1.34 LINK C MSE A 312 N BSER A 313 1555 1555 1.34 LINK C ALA A 338 N MSE A 339 1555 1555 1.36 LINK C MSE A 339 N ALA A 340 1555 1555 1.36 LINK C GLY B 84 N MSE B 85 1555 1555 1.36 LINK C MSE B 85 N MSE B 86 1555 1555 1.35 LINK C MSE B 86 N SER B 87 1555 1555 1.35 LINK C ALA B 91 N AMSE B 92 1555 1555 1.34 LINK C ALA B 91 N BMSE B 92 1555 1555 1.35 LINK C AMSE B 92 N TYR B 93 1555 1555 1.35 LINK C BMSE B 92 N TYR B 93 1555 1555 1.35 LINK C GLN B 263 N MSE B 264 1555 1555 1.35 LINK C MSE B 264 N ILE B 265 1555 1555 1.36 LINK C ASP B 311 N MSE B 312 1555 1555 1.33 LINK C MSE B 312 N SER B 313 1555 1555 1.35 LINK C ALA B 338 N MSE B 339 1555 1555 1.36 LINK C MSE B 339 N ALA B 340 1555 1555 1.36 CISPEP 1 TYR A 53 PRO A 54 0 -6.01 CISPEP 2 LEU A 122 PRO A 123 0 -5.34 CISPEP 3 TYR B 53 PRO B 54 0 -7.75 CISPEP 4 LEU B 122 PRO B 123 0 -3.01 SITE 1 AC1 7 TYR A 63 LEU A 79 TRP A 80 SER A 128 SITE 2 AC1 7 ASP A 142 EPE A 408 HOH A 600 SITE 1 AC2 8 ASP A 46 GLN A 115 ASP A 330 HIS A 331 SITE 2 AC2 8 ASN A 332 HOH A 644 HOH A 672 HOH A 739 SITE 1 AC3 1 GLU A 180 SITE 1 AC4 4 ARG A 359 TRP A 371 HOH A 606 HOH A 745 SITE 1 AC5 4 ARG A 121 GLN A 135 HIS A 136 GLY A 137 SITE 1 AC6 5 ARG A 231 CYS A 235 PHE A 240 ASP A 283 SITE 2 AC6 5 LYS A 286 SITE 1 AC7 2 GLN A 43 HOH A 702 SITE 1 AC8 12 THR A 62 TYR A 63 TRP A 80 ASP A 141 SITE 2 AC8 12 ASP A 142 TRP A 145 TRP A 187 TYR A 259 SITE 3 AC8 12 EDO A 401 HOH A 517 HOH A 600 HOH A 798 SITE 1 AC9 8 TYR B 63 LEU B 64 LEU B 79 TRP B 80 SITE 2 AC9 8 SER B 128 ASP B 142 EPE B 410 HOH B 668 SITE 1 BC1 7 ASP B 46 GLN B 115 ASP B 330 ASN B 332 SITE 2 BC1 7 HOH B 625 HOH B 677 HOH B 756 SITE 1 BC2 6 CYS B 151 ASP B 152 ARG B 155 LYS B 209 SITE 2 BC2 6 HOH B 608 HOH B 779 SITE 1 BC3 5 ARG B 296 ARG B 337 GLU B 341 EDO B 406 SITE 2 BC3 5 HOH B 820 SITE 1 BC4 5 TYR B 63 ARG B 359 TRP B 371 HOH B 614 SITE 2 BC4 5 HOH B 813 SITE 1 BC5 5 VAL B 306 EDO B 404 HOH B 655 HOH B 685 SITE 2 BC5 5 HOH B 822 SITE 1 BC6 1 HIS B 233 SITE 1 BC7 4 TYR B 257 PHE B 315 EPE B 410 HOH B 689 SITE 1 BC8 3 ARG B 231 ASP B 277 TYR B 280 SITE 1 BC9 13 THR B 62 TYR B 63 TRP B 80 ASP B 141 SITE 2 BC9 13 ASP B 142 TRP B 145 TRP B 187 TYR B 259 SITE 3 BC9 13 EDO B 401 EDO B 408 HOH B 572 HOH B 668 SITE 4 BC9 13 HOH B 696 CRYST1 50.230 61.220 63.750 91.43 90.28 114.12 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019908 0.008914 0.000361 0.00000 SCALE2 0.000000 0.017897 0.000529 0.00000 SCALE3 0.000000 0.000000 0.015693 0.00000