HEADER THIAMINE BINDING PROTEIN 23-SEP-13 4MUU
TITLE STRUCTURE OF THIT WITH PYRITHIAMINE BOUND
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: THIAMINE TRANSPORTER THIT;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: THIAMINE ECF TRANSPORTER S COMPONENT THIT;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS;
SOURCE 3 ORGANISM_TAXID: 746361;
SOURCE 4 STRAIN: NZ9000;
SOURCE 5 GENE: LLNZ_01755;
SOURCE 6 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 746361;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NZ9000
KEYWDS S-COMPONENT, ECF TRANSPORTER, ABC TRANSPORTER, THIAMINE BINDING
KEYWDS 2 PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR L.J.Y.M.SWIER,A.GUSKOV,D.J.SLOTBOOM
REVDAT 3 20-SEP-23 4MUU 1 HETSYN
REVDAT 2 29-JUL-20 4MUU 1 COMPND REMARK SEQADV HETNAM
REVDAT 2 2 1 HETSYN SITE
REVDAT 1 17-SEP-14 4MUU 0
JRNL AUTH L.J.Y.M.SWIER,L.GOMEZ,A.GUSKOV,A.K.H.HIRSCH,D.J.SLOTBOOM
JRNL TITL STRUCTURAL STUDIES ON THE THIAMIN BINDING PROTEIN THIT
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.22
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8
REMARK 3 NUMBER OF REFLECTIONS : 37528
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.196
REMARK 3 R VALUE (WORKING SET) : 0.194
REMARK 3 FREE R VALUE : 0.236
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1876
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 42.2256 - 4.9354 0.99 2834 149 0.2281 0.2640
REMARK 3 2 4.9354 - 3.9183 1.00 2769 145 0.1887 0.2109
REMARK 3 3 3.9183 - 3.4232 1.00 2768 146 0.1820 0.2168
REMARK 3 4 3.4232 - 3.1104 1.00 2765 146 0.1784 0.2176
REMARK 3 5 3.1104 - 2.8875 1.00 2767 145 0.1768 0.2340
REMARK 3 6 2.8875 - 2.7173 1.00 2781 147 0.1743 0.2365
REMARK 3 7 2.7173 - 2.5812 1.00 2753 145 0.1752 0.2468
REMARK 3 8 2.5812 - 2.4689 1.00 2751 144 0.1777 0.2259
REMARK 3 9 2.4689 - 2.3738 1.00 2736 144 0.1801 0.2641
REMARK 3 10 2.3738 - 2.2919 0.99 2747 145 0.1892 0.2473
REMARK 3 11 2.2919 - 2.2203 0.97 2704 143 0.2374 0.2867
REMARK 3 12 2.2203 - 2.1568 0.97 2669 140 0.2186 0.2408
REMARK 3 13 2.1568 - 2.1000 0.95 2608 137 0.2181 0.2669
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.850
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.012 3309
REMARK 3 ANGLE : 1.409 4341
REMARK 3 CHIRALITY : 0.081 471
REMARK 3 PLANARITY : 0.007 459
REMARK 3 DIHEDRAL : 20.122 1347
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 15
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 36 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.9780 2.5239 55.2864
REMARK 3 T TENSOR
REMARK 3 T11: 0.3342 T22: 0.4588
REMARK 3 T33: 0.2077 T12: 0.0964
REMARK 3 T13: 0.0835 T23: 0.0517
REMARK 3 L TENSOR
REMARK 3 L11: 5.5767 L22: 4.0897
REMARK 3 L33: 7.9315 L12: 0.8275
REMARK 3 L13: -0.3440 L23: -5.2962
REMARK 3 S TENSOR
REMARK 3 S11: -0.1239 S12: -0.8326 S13: -0.4249
REMARK 3 S21: 0.8922 S22: -0.2371 S23: 0.0027
REMARK 3 S31: 0.5582 S32: 0.5105 S33: 0.3575
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 79 )
REMARK 3 ORIGIN FOR THE GROUP (A): 24.4429 10.5571 48.4979
REMARK 3 T TENSOR
REMARK 3 T11: 0.1961 T22: 0.2470
REMARK 3 T33: 0.1579 T12: 0.0519
REMARK 3 T13: 0.0010 T23: 0.0042
REMARK 3 L TENSOR
REMARK 3 L11: 2.8616 L22: 3.4285
REMARK 3 L33: 4.9256 L12: -0.0380
REMARK 3 L13: -0.8302 L23: 0.1182
REMARK 3 S TENSOR
REMARK 3 S11: -0.0888 S12: -0.3152 S13: -0.0637
REMARK 3 S21: 0.4053 S22: 0.0867 S23: -0.0279
REMARK 3 S31: -0.1461 S32: 0.1795 S33: -0.0271
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 108 )
REMARK 3 ORIGIN FOR THE GROUP (A): 16.1645 12.2771 50.4467
REMARK 3 T TENSOR
REMARK 3 T11: 0.2553 T22: 0.2575
REMARK 3 T33: 0.1877 T12: 0.0561
REMARK 3 T13: 0.0662 T23: 0.0161
REMARK 3 L TENSOR
REMARK 3 L11: 2.2880 L22: 5.8248
REMARK 3 L33: 4.8117 L12: -2.5195
REMARK 3 L13: -0.7000 L23: 2.9846
REMARK 3 S TENSOR
REMARK 3 S11: -0.3422 S12: -0.5210 S13: 0.0478
REMARK 3 S21: 0.8662 S22: 0.4241 S23: 0.1101
REMARK 3 S31: -0.0169 S32: 0.0174 S33: 0.0260
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 116 )
REMARK 3 ORIGIN FOR THE GROUP (A): 30.1656 -8.7495 38.3659
REMARK 3 T TENSOR
REMARK 3 T11: 0.3583 T22: 0.3468
REMARK 3 T33: 0.3680 T12: 0.1456
REMARK 3 T13: 0.0016 T23: 0.0248
REMARK 3 L TENSOR
REMARK 3 L11: 9.3162 L22: 7.6460
REMARK 3 L33: 7.0250 L12: -5.6281
REMARK 3 L13: -6.5702 L23: 7.1176
REMARK 3 S TENSOR
REMARK 3 S11: 0.1561 S12: -0.7683 S13: -0.3056
REMARK 3 S21: -0.1644 S22: 0.0621 S23: 0.0793
REMARK 3 S31: 1.1581 S32: 0.4655 S33: 0.0745
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 142 )
REMARK 3 ORIGIN FOR THE GROUP (A): 17.1026 10.1588 39.5992
REMARK 3 T TENSOR
REMARK 3 T11: 0.1649 T22: 0.1919
REMARK 3 T33: 0.1906 T12: 0.0373
REMARK 3 T13: 0.0367 T23: 0.0243
REMARK 3 L TENSOR
REMARK 3 L11: 8.8140 L22: 8.4293
REMARK 3 L33: 3.6661 L12: -6.5494
REMARK 3 L13: -3.6735 L23: 4.0732
REMARK 3 S TENSOR
REMARK 3 S11: 0.0570 S12: 0.1222 S13: -0.1192
REMARK 3 S21: -0.0664 S22: -0.1635 S23: 0.6117
REMARK 3 S31: -0.2433 S32: -0.3773 S33: 0.0619
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 187 )
REMARK 3 ORIGIN FOR THE GROUP (A): 23.1834 15.7082 38.2372
REMARK 3 T TENSOR
REMARK 3 T11: 0.2362 T22: 0.1618
REMARK 3 T33: 0.1423 T12: -0.0179
REMARK 3 T13: 0.0096 T23: -0.0304
REMARK 3 L TENSOR
REMARK 3 L11: 3.3874 L22: 3.6005
REMARK 3 L33: 2.9214 L12: -0.5333
REMARK 3 L13: -1.2202 L23: -0.6473
REMARK 3 S TENSOR
REMARK 3 S11: 0.0448 S12: 0.2103 S13: 0.5416
REMARK 3 S21: 0.3152 S22: -0.0442 S23: -0.1822
REMARK 3 S31: -0.4532 S32: -0.0437 S33: -0.0495
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 192 )
REMARK 3 ORIGIN FOR THE GROUP (A): 34.4055 -11.9526 49.1051
REMARK 3 T TENSOR
REMARK 3 T11: 0.9341 T22: 0.6098
REMARK 3 T33: 0.5852 T12: 0.3942
REMARK 3 T13: 0.0324 T23: 0.1485
REMARK 3 L TENSOR
REMARK 3 L11: 7.6075 L22: 7.2341
REMARK 3 L33: 2.0026 L12: -2.8530
REMARK 3 L13: 9.0221 L23: -2.9130
REMARK 3 S TENSOR
REMARK 3 S11: -1.0949 S12: -1.1212 S13: -0.9053
REMARK 3 S21: 1.0980 S22: -0.0896 S23: -0.0539
REMARK 3 S31: 0.3662 S32: 0.6123 S33: 0.8641
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 36 )
REMARK 3 ORIGIN FOR THE GROUP (A): 36.3708 20.9332 7.4697
REMARK 3 T TENSOR
REMARK 3 T11: 0.5207 T22: 0.5751
REMARK 3 T33: 0.2388 T12: -0.1697
REMARK 3 T13: 0.0599 T23: 0.0282
REMARK 3 L TENSOR
REMARK 3 L11: 3.3008 L22: 8.2521
REMARK 3 L33: 4.4928 L12: -0.0434
REMARK 3 L13: 0.0712 L23: -6.0622
REMARK 3 S TENSOR
REMARK 3 S11: -0.3400 S12: 0.6537 S13: -0.0353
REMARK 3 S21: -0.8540 S22: -0.3611 S23: -1.2857
REMARK 3 S31: -0.0759 S32: 0.5771 S33: 0.6432
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 79 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.8264 14.3744 14.7634
REMARK 3 T TENSOR
REMARK 3 T11: 0.2553 T22: 0.2954
REMARK 3 T33: 0.2326 T12: -0.0865
REMARK 3 T13: 0.0697 T23: -0.0387
REMARK 3 L TENSOR
REMARK 3 L11: 2.2071 L22: 2.8947
REMARK 3 L33: 4.2974 L12: 0.7588
REMARK 3 L13: -0.3043 L23: -1.0432
REMARK 3 S TENSOR
REMARK 3 S11: -0.1906 S12: 0.4388 S13: -0.0740
REMARK 3 S21: -0.4407 S22: 0.2249 S23: -0.2298
REMARK 3 S31: 0.1886 S32: 0.2733 S33: -0.0453
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 108 )
REMARK 3 ORIGIN FOR THE GROUP (A): 21.7534 12.5732 12.1948
REMARK 3 T TENSOR
REMARK 3 T11: 0.2751 T22: 0.2783
REMARK 3 T33: 0.1675 T12: -0.0353
REMARK 3 T13: 0.0488 T23: 0.0248
REMARK 3 L TENSOR
REMARK 3 L11: 2.8326 L22: 5.6516
REMARK 3 L33: 5.4441 L12: 1.3772
REMARK 3 L13: 1.1389 L23: 1.6660
REMARK 3 S TENSOR
REMARK 3 S11: -0.2096 S12: 0.5865 S13: -0.0724
REMARK 3 S21: -0.5784 S22: 0.2319 S23: 0.0422
REMARK 3 S31: 0.5287 S32: -0.0205 S33: 0.0183
REMARK 3 TLS GROUP : 11
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 116 )
REMARK 3 ORIGIN FOR THE GROUP (A): 34.9045 34.6503 23.4488
REMARK 3 T TENSOR
REMARK 3 T11: 0.5770 T22: 0.3040
REMARK 3 T33: 0.4075 T12: -0.1705
REMARK 3 T13: -0.0616 T23: 0.1296
REMARK 3 L TENSOR
REMARK 3 L11: 3.3890 L22: 1.9006
REMARK 3 L33: 7.4209 L12: 1.1449
REMARK 3 L13: 1.6445 L23: 3.7202
REMARK 3 S TENSOR
REMARK 3 S11: 0.5890 S12: 0.0440 S13: 0.2874
REMARK 3 S21: -0.3862 S22: 0.6107 S23: 0.7260
REMARK 3 S31: -0.8118 S32: 0.5887 S33: -0.5245
REMARK 3 TLS GROUP : 12
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 142 )
REMARK 3 ORIGIN FOR THE GROUP (A): 21.7945 15.6370 22.9050
REMARK 3 T TENSOR
REMARK 3 T11: 0.2048 T22: 0.1754
REMARK 3 T33: 0.1670 T12: -0.0412
REMARK 3 T13: 0.0534 T23: -0.0020
REMARK 3 L TENSOR
REMARK 3 L11: 8.9268 L22: 8.8297
REMARK 3 L33: 3.9224 L12: 6.8800
REMARK 3 L13: 2.1846 L23: 1.0553
REMARK 3 S TENSOR
REMARK 3 S11: -0.0513 S12: 0.0709 S13: -0.1071
REMARK 3 S21: 0.0082 S22: 0.0544 S23: -0.0243
REMARK 3 S31: -0.3333 S32: 0.0512 S33: -0.0046
REMARK 3 TLS GROUP : 13
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 152 )
REMARK 3 ORIGIN FOR THE GROUP (A): 15.4322 -3.4889 23.8720
REMARK 3 T TENSOR
REMARK 3 T11: 0.4580 T22: 0.2898
REMARK 3 T33: 0.4701 T12: -0.1761
REMARK 3 T13: -0.1117 T23: 0.0376
REMARK 3 L TENSOR
REMARK 3 L11: 2.5781 L22: 6.5499
REMARK 3 L33: 2.6015 L12: 0.5705
REMARK 3 L13: -1.6316 L23: -3.5123
REMARK 3 S TENSOR
REMARK 3 S11: 0.2068 S12: 0.0274 S13: -1.2758
REMARK 3 S21: -0.7208 S22: 0.0750 S23: -0.3150
REMARK 3 S31: 1.0503 S32: -0.5574 S33: -0.0653
REMARK 3 TLS GROUP : 14
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 187 )
REMARK 3 ORIGIN FOR THE GROUP (A): 31.7791 14.8170 25.5286
REMARK 3 T TENSOR
REMARK 3 T11: 0.2178 T22: 0.1683
REMARK 3 T33: 0.1833 T12: -0.0100
REMARK 3 T13: -0.0091 T23: -0.0160
REMARK 3 L TENSOR
REMARK 3 L11: 4.1453 L22: 6.2479
REMARK 3 L33: 3.6995 L12: 3.0342
REMARK 3 L13: -0.8037 L23: -2.6085
REMARK 3 S TENSOR
REMARK 3 S11: -0.3339 S12: -0.2855 S13: -0.1713
REMARK 3 S21: -0.3364 S22: -0.1995 S23: -0.5655
REMARK 3 S31: -0.1525 S32: 0.4639 S33: 0.4213
REMARK 3 TLS GROUP : 15
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 188 THROUGH 192 )
REMARK 3 ORIGIN FOR THE GROUP (A): 40.1520 36.9227 13.3462
REMARK 3 T TENSOR
REMARK 3 T11: 0.7348 T22: 0.4582
REMARK 3 T33: 1.0005 T12: -0.8387
REMARK 3 T13: -0.2946 T23: 0.9480
REMARK 3 L TENSOR
REMARK 3 L11: 0.0790 L22: 8.0330
REMARK 3 L33: 0.0540 L12: -0.8279
REMARK 3 L13: -0.0730 L23: 0.6687
REMARK 3 S TENSOR
REMARK 3 S11: -0.4448 S12: 0.7738 S13: 0.7586
REMARK 3 S21: -1.2802 S22: 0.2743 S23: -0.6440
REMARK 3 S31: -0.8108 S32: 0.5487 S33: 0.0439
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4MUU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-13.
REMARK 100 THE DEPOSITION ID IS D_1000082393.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 28-NOV-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : BM14
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625
REMARK 200 MONOCHROMATOR : SI(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37536
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100
REMARK 200 RESOLUTION RANGE LOW (A) : 42.217
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 3RLB
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 68.32
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.88
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M AMMONIUM NITRATE, 20% PEG3350,
REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.78000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.29500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.78000
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.29500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 HIS A 2
REMARK 465 HIS A 3
REMARK 465 HIS A 4
REMARK 465 HIS A 5
REMARK 465 HIS A 6
REMARK 465 HIS A 7
REMARK 465 HIS A 8
REMARK 465 HIS A 9
REMARK 465 ALA A 10
REMARK 465 MET A 11
REMARK 465 SER A 12
REMARK 465 ASN A 13
REMARK 465 SER A 14
REMARK 465 MET B 1
REMARK 465 HIS B 2
REMARK 465 HIS B 3
REMARK 465 HIS B 4
REMARK 465 HIS B 5
REMARK 465 HIS B 6
REMARK 465 HIS B 7
REMARK 465 HIS B 8
REMARK 465 HIS B 9
REMARK 465 ALA B 10
REMARK 465 MET B 11
REMARK 465 SER B 12
REMARK 465 ASN B 13
REMARK 465 SER B 14
REMARK 465 LYS B 15
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 185 CG CD CE NZ
REMARK 470 LYS B 185 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 TYR A 42 117.95 -168.76
REMARK 500 LEU A 96 -62.45 -122.08
REMARK 500 ASN B 39 16.41 -145.03
REMARK 500 LEU B 96 -70.36 -122.56
REMARK 500 LYS B 149 116.76 -39.20
REMARK 500 PHE B 183 57.54 -117.78
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3RLB RELATED DB: PDB
REMARK 900 STRUCTURE OF THIT WITH NATIVE SUBSTRATE BOUND
DBREF 4MUU A 11 192 UNP D8KFM5 D8KFM5_LACLN 1 182
DBREF 4MUU B 11 192 UNP D8KFM5 D8KFM5_LACLN 1 182
SEQADV 4MUU MET A 1 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 2 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 3 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 4 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 5 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 6 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 7 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 8 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS A 9 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU ALA A 10 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU MET B 1 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 2 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 3 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 4 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 5 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 6 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 7 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 8 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU HIS B 9 UNP D8KFM5 EXPRESSION TAG
SEQADV 4MUU ALA B 10 UNP D8KFM5 EXPRESSION TAG
SEQRES 1 A 192 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA MET SER ASN
SEQRES 2 A 192 SER LYS PHE ASN VAL ARG LEU LEU THR GLU ILE ALA PHE
SEQRES 3 A 192 MET ALA ALA LEU ALA PHE ILE ILE SER LEU ILE PRO ASN
SEQRES 4 A 192 THR VAL TYR GLY TRP ILE ILE VAL GLU ILE ALA CYS ILE
SEQRES 5 A 192 PRO ILE LEU LEU LEU SER LEU ARG ARG GLY LEU THR ALA
SEQRES 6 A 192 GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE LEU SER MET
SEQRES 7 A 192 ILE THR GLY HIS ALA TYR ILE LEU SER LEU SER GLN ALA
SEQRES 8 A 192 PHE LEU GLU TYR LEU VAL ALA PRO VAL SER LEU GLY ILE
SEQRES 9 A 192 ALA GLY LEU PHE ARG GLN LYS THR ALA PRO LEU LYS LEU
SEQRES 10 A 192 ALA PRO VAL LEU LEU GLY THR PHE VAL ALA VAL LEU LEU
SEQRES 11 A 192 LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE ILE PHE TRP
SEQRES 12 A 192 SER GLN TYR ALA TRP LYS GLY TRP GLY ALA VAL ALA TYR
SEQRES 13 A 192 SER LEU ALA VAL ASN GLY ILE SER GLY ILE LEU THR ALA
SEQRES 14 A 192 ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE VAL LYS LYS
SEQRES 15 A 192 PHE PRO LYS LEU PHE ILE HIS SER ASN TYR
SEQRES 1 B 192 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA MET SER ASN
SEQRES 2 B 192 SER LYS PHE ASN VAL ARG LEU LEU THR GLU ILE ALA PHE
SEQRES 3 B 192 MET ALA ALA LEU ALA PHE ILE ILE SER LEU ILE PRO ASN
SEQRES 4 B 192 THR VAL TYR GLY TRP ILE ILE VAL GLU ILE ALA CYS ILE
SEQRES 5 B 192 PRO ILE LEU LEU LEU SER LEU ARG ARG GLY LEU THR ALA
SEQRES 6 B 192 GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE LEU SER MET
SEQRES 7 B 192 ILE THR GLY HIS ALA TYR ILE LEU SER LEU SER GLN ALA
SEQRES 8 B 192 PHE LEU GLU TYR LEU VAL ALA PRO VAL SER LEU GLY ILE
SEQRES 9 B 192 ALA GLY LEU PHE ARG GLN LYS THR ALA PRO LEU LYS LEU
SEQRES 10 B 192 ALA PRO VAL LEU LEU GLY THR PHE VAL ALA VAL LEU LEU
SEQRES 11 B 192 LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE ILE PHE TRP
SEQRES 12 B 192 SER GLN TYR ALA TRP LYS GLY TRP GLY ALA VAL ALA TYR
SEQRES 13 B 192 SER LEU ALA VAL ASN GLY ILE SER GLY ILE LEU THR ALA
SEQRES 14 B 192 ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE VAL LYS LYS
SEQRES 15 B 192 PHE PRO LYS LEU PHE ILE HIS SER ASN TYR
HET 218 A 201 19
HET BNG A 202 21
HET PEG A 203 7
HET PEG A 204 7
HET PEG A 205 7
HET PEG A 206 7
HET PEG A 207 7
HET PEG A 208 7
HET PEG A 209 7
HET PG0 A 210 8
HET PG0 A 211 8
HET PG0 A 212 8
HET PG0 A 213 8
HET PG0 A 214 8
HET PG0 A 215 8
HET PG4 A 216 13
HET PG4 A 217 13
HET PG4 A 218 13
HET PG4 A 219 13
HET PG4 A 220 13
HET 1PE A 221 16
HET PGE A 222 10
HET 218 B 201 19
HET BNG B 202 21
HET BNG B 203 21
HET PEG B 204 7
HET PEG B 205 7
HET PEG B 206 7
HET P6G B 207 19
HET P6G B 208 19
HET P6G B 209 19
HET P6G B 210 19
HET PG0 B 211 8
HET PG0 B 212 8
HET PG4 B 213 13
HET PG4 B 214 13
HET PG4 B 215 13
HET PG4 B 216 13
HET PE5 B 217 27
HET PGE B 218 10
HET PGE B 219 10
HETNAM 218 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-
HETNAM 2 218 HYDROXYETHYL)-2-METHYLPYRIDINIUM
HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL
HETNAM PG4 TETRAETHYLENE GLYCOL
HETNAM 1PE PENTAETHYLENE GLYCOL
HETNAM PGE TRIETHYLENE GLYCOL
HETNAM P6G HEXAETHYLENE GLYCOL
HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D-
HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE
HETSYN PG0 PEG 6000
HETSYN 1PE PEG400
HETSYN P6G POLYETHYLENE GLYCOL PEG400
HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-
HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL; POLYETHYLENE
HETSYN 3 PE5 GLYCOL PEG400
FORMUL 3 218 2(C14 H19 N4 O 1+)
FORMUL 4 BNG 3(C15 H30 O6)
FORMUL 5 PEG 10(C4 H10 O3)
FORMUL 12 PG0 8(C5 H12 O3)
FORMUL 18 PG4 9(C8 H18 O5)
FORMUL 23 1PE C10 H22 O6
FORMUL 24 PGE 3(C6 H14 O4)
FORMUL 31 P6G 4(C12 H26 O7)
FORMUL 41 PE5 C18 H38 O9
FORMUL 44 HOH *110(H2 O)
HELIX 1 1 PHE A 16 SER A 35 1 20
HELIX 2 2 ALA A 50 GLY A 62 1 13
HELIX 3 3 GLY A 62 THR A 80 1 19
HELIX 4 4 SER A 87 LEU A 96 1 10
HELIX 5 5 LEU A 96 LEU A 102 1 7
HELIX 6 6 GLY A 103 ARG A 109 5 7
HELIX 7 7 LYS A 116 TRP A 143 1 28
HELIX 8 8 SER A 144 ALA A 147 5 4
HELIX 9 9 GLY A 152 PHE A 183 1 32
HELIX 10 10 PRO A 184 ILE A 188 5 5
HELIX 11 11 ASN B 17 LEU B 36 1 20
HELIX 12 12 GLU B 48 ALA B 50 5 3
HELIX 13 13 CYS B 51 GLY B 62 1 12
HELIX 14 14 GLY B 62 THR B 80 1 19
HELIX 15 15 SER B 87 LEU B 96 1 10
HELIX 16 16 LEU B 96 LEU B 102 1 7
HELIX 17 17 GLY B 103 ARG B 109 5 7
HELIX 18 18 LYS B 116 TRP B 143 1 28
HELIX 19 19 SER B 144 ALA B 147 5 4
HELIX 20 20 GLY B 152 PHE B 183 1 32
HELIX 21 21 PRO B 184 ILE B 188 5 5
SHEET 1 A 2 THR A 40 TYR A 42 0
SHEET 2 A 2 ILE A 45 ILE A 46 -1 O ILE A 45 N VAL A 41
SHEET 1 B 2 THR B 40 TYR B 42 0
SHEET 2 B 2 ILE B 45 ILE B 46 -1 O ILE B 45 N TYR B 42
CISPEP 1 ALA A 113 PRO A 114 0 -1.68
CISPEP 2 ALA B 113 PRO B 114 0 -3.41
CRYST1 61.560 84.590 127.260 90.00 95.61 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016244 0.000000 0.001595 0.00000
SCALE2 0.000000 0.011822 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007896 0.00000