HEADER THIAMINE BINDING PROTEIN/INHIBITOR 08-OCT-13 4N4D
TITLE STRUCTURE OF THIT WITH AV-38 BOUND
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: THIAMINE BINDING PROTEIN THIT;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: UNP RESIDUES 7-182;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS;
SOURCE 3 ORGANISM_TAXID: 746361;
SOURCE 4 STRAIN: NZ9000;
SOURCE 5 GENE: LLNZ_01755;
SOURCE 6 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 746361;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NZ9000
KEYWDS S-COMPONENT, ECF TRANSPORTER, ABC TRANSPORTER, TRANSPORT PROTEIN,
KEYWDS 2 THIAMINE BINDING PROTEIN-INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR L.J.Y.M.SWIER,A.GUSKOV,D.J.SLOTBOOM
REVDAT 3 20-SEP-23 4N4D 1 HETSYN
REVDAT 2 29-JUL-20 4N4D 1 COMPND REMARK SEQADV HETNAM
REVDAT 2 2 1 HETSYN SITE
REVDAT 1 17-SEP-14 4N4D 0
JRNL AUTH L.J.Y.M.SWIER,L.GOMEZ,A.GUSKOV,A.K.H.HIRSCH,D.J.SLOTBOOM
JRNL TITL STRUCTURAL STUDIES ON THE THIAMINE BINDING PROTEIN THIT
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.30
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3
REMARK 3 NUMBER OF REFLECTIONS : 25926
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.207
REMARK 3 R VALUE (WORKING SET) : 0.204
REMARK 3 FREE R VALUE : 0.257
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1296
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 42.3108 - 4.9899 0.99 2797 147 0.2266 0.2247
REMARK 3 2 4.9899 - 3.9615 0.99 2749 145 0.1725 0.2382
REMARK 3 3 3.9615 - 3.4610 0.99 2720 143 0.1822 0.2853
REMARK 3 4 3.4610 - 3.1447 1.00 2748 144 0.1711 0.1961
REMARK 3 5 3.1447 - 2.9194 0.99 2707 143 0.2102 0.2349
REMARK 3 6 2.9194 - 2.7473 0.99 2739 144 0.2183 0.2942
REMARK 3 7 2.7473 - 2.6097 1.00 2738 144 0.2421 0.3809
REMARK 3 8 2.6097 - 2.4961 1.00 2728 144 0.2708 0.3424
REMARK 3 9 2.4961 - 2.4000 0.99 2704 142 0.2890 0.3564
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.200
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.014 3171
REMARK 3 ANGLE : 1.480 4208
REMARK 3 CHIRALITY : 0.077 466
REMARK 3 PLANARITY : 0.008 452
REMARK 3 DIHEDRAL : 19.972 1276
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 18
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 26 )
REMARK 3 ORIGIN FOR THE GROUP (A): 32.7223 3.0002 55.3128
REMARK 3 T TENSOR
REMARK 3 T11: 0.5489 T22: 0.6838
REMARK 3 T33: 0.4380 T12: 0.0401
REMARK 3 T13: 0.1706 T23: 0.0637
REMARK 3 L TENSOR
REMARK 3 L11: 7.7869 L22: 5.2324
REMARK 3 L33: 9.5530 L12: 1.9262
REMARK 3 L13: -0.8354 L23: -6.5282
REMARK 3 S TENSOR
REMARK 3 S11: -0.4479 S12: -1.2090 S13: -0.6226
REMARK 3 S21: 0.8506 S22: -0.9204 S23: -1.6362
REMARK 3 S31: 0.3480 S32: 0.9923 S33: 1.2842
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 38 )
REMARK 3 ORIGIN FOR THE GROUP (A): 27.5410 21.3992 43.1215
REMARK 3 T TENSOR
REMARK 3 T11: 0.8537 T22: 0.4083
REMARK 3 T33: 0.5822 T12: 0.0152
REMARK 3 T13: 0.0330 T23: -0.0734
REMARK 3 L TENSOR
REMARK 3 L11: 9.1453 L22: 9.8248
REMARK 3 L33: 5.1090 L12: -4.6166
REMARK 3 L13: 4.1951 L23: -6.9597
REMARK 3 S TENSOR
REMARK 3 S11: -0.0782 S12: -1.1532 S13: 0.3132
REMARK 3 S21: 1.7656 S22: 0.5730 S23: 0.0476
REMARK 3 S31: -1.5392 S32: -0.5618 S33: -0.3822
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 69 )
REMARK 3 ORIGIN FOR THE GROUP (A): 26.6685 3.6816 50.9388
REMARK 3 T TENSOR
REMARK 3 T11: 0.3865 T22: 0.4115
REMARK 3 T33: 0.3383 T12: 0.0737
REMARK 3 T13: -0.0772 T23: 0.0514
REMARK 3 L TENSOR
REMARK 3 L11: 2.6921 L22: 6.8761
REMARK 3 L33: 4.3082 L12: 1.0357
REMARK 3 L13: -0.1199 L23: 0.1718
REMARK 3 S TENSOR
REMARK 3 S11: -0.2479 S12: -0.3667 S13: -0.2378
REMARK 3 S21: 1.1468 S22: 0.1583 S23: -0.1749
REMARK 3 S31: -0.0325 S32: 0.0419 S33: 0.0652
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 98 )
REMARK 3 ORIGIN FOR THE GROUP (A): 18.5737 10.6222 50.6132
REMARK 3 T TENSOR
REMARK 3 T11: 0.4638 T22: 0.3162
REMARK 3 T33: 0.3677 T12: 0.0139
REMARK 3 T13: 0.0225 T23: 0.0632
REMARK 3 L TENSOR
REMARK 3 L11: 8.1495 L22: 8.2222
REMARK 3 L33: 6.8091 L12: -3.8380
REMARK 3 L13: -3.3753 L23: 3.6105
REMARK 3 S TENSOR
REMARK 3 S11: -0.0621 S12: -0.4039 S13: 0.4959
REMARK 3 S21: 0.5295 S22: 0.0046 S23: -0.2185
REMARK 3 S31: -0.4611 S32: -0.2214 S33: 0.1238
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 107 )
REMARK 3 ORIGIN FOR THE GROUP (A): 33.0062 -9.5300 38.1109
REMARK 3 T TENSOR
REMARK 3 T11: 0.8096 T22: 0.3891
REMARK 3 T33: 0.7294 T12: 0.0586
REMARK 3 T13: 0.0367 T23: 0.0262
REMARK 3 L TENSOR
REMARK 3 L11: 5.9969 L22: 3.8748
REMARK 3 L33: 9.1723 L12: -3.8725
REMARK 3 L13: 0.9033 L23: -4.1426
REMARK 3 S TENSOR
REMARK 3 S11: 0.3053 S12: 0.0389 S13: -1.0344
REMARK 3 S21: 0.2105 S22: -0.4872 S23: 1.3756
REMARK 3 S31: 0.4991 S32: 0.3137 S33: 0.2777
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 132 )
REMARK 3 ORIGIN FOR THE GROUP (A): 18.7928 8.9257 40.0775
REMARK 3 T TENSOR
REMARK 3 T11: 0.3006 T22: 0.3133
REMARK 3 T33: 0.3868 T12: -0.0467
REMARK 3 T13: 0.0133 T23: 0.0194
REMARK 3 L TENSOR
REMARK 3 L11: 6.7423 L22: 9.7373
REMARK 3 L33: 2.7456 L12: -5.9789
REMARK 3 L13: -0.9058 L23: 0.9076
REMARK 3 S TENSOR
REMARK 3 S11: 0.1819 S12: -0.2693 S13: -0.4842
REMARK 3 S21: -0.2116 S22: -0.1855 S23: 0.6942
REMARK 3 S31: -0.1065 S32: -0.3441 S33: 0.0012
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 172 )
REMARK 3 ORIGIN FOR THE GROUP (A): 23.6126 16.5352 37.8784
REMARK 3 T TENSOR
REMARK 3 T11: 0.4585 T22: 0.2652
REMARK 3 T33: 0.3985 T12: -0.0359
REMARK 3 T13: -0.0610 T23: -0.0325
REMARK 3 L TENSOR
REMARK 3 L11: 6.2667 L22: 6.5122
REMARK 3 L33: 4.0481 L12: -3.6074
REMARK 3 L13: -1.3677 L23: -1.4251
REMARK 3 S TENSOR
REMARK 3 S11: 0.2329 S12: 0.1930 S13: 0.5903
REMARK 3 S21: -0.1183 S22: -0.0201 S23: -0.1396
REMARK 3 S31: -0.6438 S32: -0.1543 S33: -0.1996
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 177 )
REMARK 3 ORIGIN FOR THE GROUP (A): 39.6116 -3.7950 42.3195
REMARK 3 T TENSOR
REMARK 3 T11: 0.8560 T22: 0.5061
REMARK 3 T33: 0.7561 T12: 0.1931
REMARK 3 T13: -0.2846 T23: 0.0274
REMARK 3 L TENSOR
REMARK 3 L11: 9.6212 L22: 0.2667
REMARK 3 L33: 4.3032 L12: -1.4631
REMARK 3 L13: -6.3705 L23: 1.0284
REMARK 3 S TENSOR
REMARK 3 S11: -0.4742 S12: -1.0751 S13: -1.7293
REMARK 3 S21: 1.5823 S22: 0.2112 S23: -1.5295
REMARK 3 S31: 1.5182 S32: 1.4075 S33: 0.2783
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 182 )
REMARK 3 ORIGIN FOR THE GROUP (A): 37.5104 -13.3824 49.1755
REMARK 3 T TENSOR
REMARK 3 T11: 1.8749 T22: 0.1410
REMARK 3 T33: 0.9579 T12: 0.9401
REMARK 3 T13: 0.1597 T23: 0.2936
REMARK 3 L TENSOR
REMARK 3 L11: 2.8391 L22: 9.4845
REMARK 3 L33: 1.3643 L12: 2.2674
REMARK 3 L13: 1.3592 L23: -1.2633
REMARK 3 S TENSOR
REMARK 3 S11: -0.7478 S12: -0.7408 S13: -0.9871
REMARK 3 S21: 1.8786 S22: -0.2133 S23: -1.8485
REMARK 3 S31: 1.9564 S32: 0.8080 S33: -0.1365
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 7 THROUGH 26 )
REMARK 3 ORIGIN FOR THE GROUP (A): 37.2155 19.8073 7.6101
REMARK 3 T TENSOR
REMARK 3 T11: 0.5816 T22: 0.7742
REMARK 3 T33: 0.5725 T12: -0.0251
REMARK 3 T13: 0.0833 T23: 0.0439
REMARK 3 L TENSOR
REMARK 3 L11: 5.7031 L22: 5.4016
REMARK 3 L33: 4.6832 L12: -1.3212
REMARK 3 L13: 2.0026 L23: -4.6592
REMARK 3 S TENSOR
REMARK 3 S11: -0.6473 S12: 1.0822 S13: 0.2016
REMARK 3 S21: -1.9353 S22: -0.4689 S23: -1.2888
REMARK 3 S31: 0.2444 S32: 0.4345 S33: 1.0634
REMARK 3 TLS GROUP : 11
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 38 )
REMARK 3 ORIGIN FOR THE GROUP (A): 31.4660 1.5304 20.5210
REMARK 3 T TENSOR
REMARK 3 T11: 0.7358 T22: 0.3760
REMARK 3 T33: 0.5839 T12: 0.0007
REMARK 3 T13: 0.1751 T23: -0.1204
REMARK 3 L TENSOR
REMARK 3 L11: 4.3066 L22: 9.6248
REMARK 3 L33: 2.8993 L12: 3.9367
REMARK 3 L13: 1.5408 L23: -1.8696
REMARK 3 S TENSOR
REMARK 3 S11: -0.4299 S12: 0.7719 S13: -0.7404
REMARK 3 S21: -1.3278 S22: 0.0146 S23: -0.7178
REMARK 3 S31: 1.0915 S32: 0.3775 S33: 0.3375
REMARK 3 TLS GROUP : 12
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 69 )
REMARK 3 ORIGIN FOR THE GROUP (A): 31.1001 19.1620 11.9807
REMARK 3 T TENSOR
REMARK 3 T11: 0.3264 T22: 0.4746
REMARK 3 T33: 0.4479 T12: -0.1426
REMARK 3 T13: 0.0451 T23: 0.0349
REMARK 3 L TENSOR
REMARK 3 L11: 0.9198 L22: 3.8786
REMARK 3 L33: 4.9525 L12: -1.3591
REMARK 3 L13: -0.4450 L23: -0.7528
REMARK 3 S TENSOR
REMARK 3 S11: -0.3695 S12: 0.2296 S13: -0.0911
REMARK 3 S21: -0.4769 S22: 0.2337 S23: -0.6339
REMARK 3 S31: -0.0040 S32: 0.0064 S33: 0.1097
REMARK 3 TLS GROUP : 13
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 98 )
REMARK 3 ORIGIN FOR THE GROUP (A): 22.8480 12.3809 12.4235
REMARK 3 T TENSOR
REMARK 3 T11: 0.5987 T22: 0.3454
REMARK 3 T33: 0.4136 T12: -0.0710
REMARK 3 T13: 0.0064 T23: 0.0162
REMARK 3 L TENSOR
REMARK 3 L11: 8.2557 L22: 3.7658
REMARK 3 L33: 6.9340 L12: 4.4310
REMARK 3 L13: 2.3608 L23: 3.4091
REMARK 3 S TENSOR
REMARK 3 S11: -0.0251 S12: 0.4029 S13: -0.7916
REMARK 3 S21: -0.8379 S22: -0.1078 S23: -1.1282
REMARK 3 S31: 0.3945 S32: -0.4186 S33: 0.1197
REMARK 3 TLS GROUP : 14
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 106 )
REMARK 3 ORIGIN FOR THE GROUP (A): 37.1420 33.8482 23.7656
REMARK 3 T TENSOR
REMARK 3 T11: 0.8214 T22: 0.4553
REMARK 3 T33: 0.6902 T12: -0.1218
REMARK 3 T13: -0.0650 T23: 0.0250
REMARK 3 L TENSOR
REMARK 3 L11: 5.2967 L22: 6.6988
REMARK 3 L33: 9.3148 L12: 5.9505
REMARK 3 L13: 7.0231 L23: 7.8593
REMARK 3 S TENSOR
REMARK 3 S11: -0.3996 S12: 0.2109 S13: 0.5294
REMARK 3 S21: 0.1552 S22: 0.1188 S23: 1.2434
REMARK 3 S31: -0.6156 S32: 0.4261 S33: 0.3474
REMARK 3 TLS GROUP : 15
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 132 )
REMARK 3 ORIGIN FOR THE GROUP (A): 23.4579 14.9605 23.0808
REMARK 3 T TENSOR
REMARK 3 T11: 0.2790 T22: 0.3681
REMARK 3 T33: 0.4433 T12: 0.0012
REMARK 3 T13: 0.0230 T23: -0.0021
REMARK 3 L TENSOR
REMARK 3 L11: 4.6586 L22: 9.0478
REMARK 3 L33: 5.1569 L12: 4.7889
REMARK 3 L13: 3.9091 L23: 1.3195
REMARK 3 S TENSOR
REMARK 3 S11: 0.0363 S12: -0.1708 S13: -0.0516
REMARK 3 S21: -0.1865 S22: -0.1185 S23: -0.4009
REMARK 3 S31: -0.3927 S32: -0.1510 S33: 0.0371
REMARK 3 TLS GROUP : 16
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 142 )
REMARK 3 ORIGIN FOR THE GROUP (A): 17.2184 -4.2099 23.5587
REMARK 3 T TENSOR
REMARK 3 T11: 0.7703 T22: 0.3199
REMARK 3 T33: 0.7667 T12: -0.1212
REMARK 3 T13: -0.0076 T23: -0.0077
REMARK 3 L TENSOR
REMARK 3 L11: 7.0359 L22: 4.9866
REMARK 3 L33: 5.8461 L12: 5.0448
REMARK 3 L13: -4.3636 L23: -5.2109
REMARK 3 S TENSOR
REMARK 3 S11: -0.4886 S12: -0.0400 S13: -0.4384
REMARK 3 S21: -0.4847 S22: -0.0964 S23: -0.3873
REMARK 3 S31: 0.5501 S32: -0.5052 S33: 0.5609
REMARK 3 TLS GROUP : 17
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 177 )
REMARK 3 ORIGIN FOR THE GROUP (A): 33.9111 14.0687 25.3608
REMARK 3 T TENSOR
REMARK 3 T11: 0.3856 T22: 0.3478
REMARK 3 T33: 0.5558 T12: 0.0039
REMARK 3 T13: -0.0594 T23: 0.0391
REMARK 3 L TENSOR
REMARK 3 L11: 3.6095 L22: 5.0588
REMARK 3 L33: 5.4020 L12: 1.9607
REMARK 3 L13: -1.0891 L23: -2.6980
REMARK 3 S TENSOR
REMARK 3 S11: -0.1129 S12: 0.0457 S13: -0.3169
REMARK 3 S21: 0.0973 S22: -0.3942 S23: -1.1231
REMARK 3 S31: -0.3143 S32: 0.6703 S33: 0.4829
REMARK 3 TLS GROUP : 18
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 182 )
REMARK 3 ORIGIN FOR THE GROUP (A): 42.1711 36.2735 13.5901
REMARK 3 T TENSOR
REMARK 3 T11: 1.7048 T22: 0.6012
REMARK 3 T33: 1.1429 T12: -0.7199
REMARK 3 T13: -0.3892 T23: 0.1203
REMARK 3 L TENSOR
REMARK 3 L11: 6.5159 L22: 5.9727
REMARK 3 L33: 0.2696 L12: 4.9036
REMARK 3 L13: -0.4514 L23: -1.0829
REMARK 3 S TENSOR
REMARK 3 S11: -1.5770 S12: 1.4190 S13: 0.6759
REMARK 3 S21: -2.1838 S22: -0.1033 S23: 0.2161
REMARK 3 S31: -1.4962 S32: 0.7617 S33: 0.6657
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4N4D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-13.
REMARK 100 THE DEPOSITION ID IS D_1000082736.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 14-JUN-13
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID23-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625
REMARK 200 MONOCHROMATOR : SI(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25926
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400
REMARK 200 RESOLUTION RANGE LOW (A) : 42.304
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 3RLB
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 71.99
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.39
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M AMMONIUM NITRATE, 20% PEG3350,
REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 31.58000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.13000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 31.58000
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.13000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 SER A 2
REMARK 465 ASN A 3
REMARK 465 SER A 4
REMARK 465 LYS A 5
REMARK 465 PHE A 6
REMARK 465 MET B 1
REMARK 465 SER B 2
REMARK 465 ASN B 3
REMARK 465 SER B 4
REMARK 465 LYS B 5
REMARK 465 PHE B 6
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 86 -69.98 -123.57
REMARK 500 TYR B 32 131.91 -170.44
REMARK 500 LEU B 86 -63.72 -128.34
REMARK 500 TRP B 138 152.49 -45.64
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3RLB RELATED DB: PDB
REMARK 900 STRUCTURE OF THIT WITH NATIVE SUBSTRATE BOUND
DBREF 4N4D A 7 182 UNP D8KFM5 D8KFM5_LACLN 7 182
DBREF 4N4D B 7 182 UNP D8KFM5 D8KFM5_LACLN 7 182
SEQADV 4N4D MET A 1 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D SER A 2 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D ASN A 3 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D SER A 4 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D LYS A 5 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D PHE A 6 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D MET B 1 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D SER B 2 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D ASN B 3 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D SER B 4 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D LYS B 5 UNP D8KFM5 EXPRESSION TAG
SEQADV 4N4D PHE B 6 UNP D8KFM5 EXPRESSION TAG
SEQRES 1 A 182 MET SER ASN SER LYS PHE ASN VAL ARG LEU LEU THR GLU
SEQRES 2 A 182 ILE ALA PHE MET ALA ALA LEU ALA PHE ILE ILE SER LEU
SEQRES 3 A 182 ILE PRO ASN THR VAL TYR GLY TRP ILE ILE VAL GLU ILE
SEQRES 4 A 182 ALA CYS ILE PRO ILE LEU LEU LEU SER LEU ARG ARG GLY
SEQRES 5 A 182 LEU THR ALA GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE
SEQRES 6 A 182 LEU SER MET ILE THR GLY HIS ALA TYR ILE LEU SER LEU
SEQRES 7 A 182 SER GLN ALA PHE LEU GLU TYR LEU VAL ALA PRO VAL SER
SEQRES 8 A 182 LEU GLY ILE ALA GLY LEU PHE ARG GLN LYS THR ALA PRO
SEQRES 9 A 182 LEU LYS LEU ALA PRO VAL LEU LEU GLY THR PHE VAL ALA
SEQRES 10 A 182 VAL LEU LEU LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE
SEQRES 11 A 182 ILE PHE TRP SER GLN TYR ALA TRP LYS GLY TRP GLY ALA
SEQRES 12 A 182 VAL ALA TYR SER LEU ALA VAL ASN GLY ILE SER GLY ILE
SEQRES 13 A 182 LEU THR ALA ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE
SEQRES 14 A 182 VAL LYS LYS PHE PRO LYS LEU PHE ILE HIS SER ASN TYR
SEQRES 1 B 182 MET SER ASN SER LYS PHE ASN VAL ARG LEU LEU THR GLU
SEQRES 2 B 182 ILE ALA PHE MET ALA ALA LEU ALA PHE ILE ILE SER LEU
SEQRES 3 B 182 ILE PRO ASN THR VAL TYR GLY TRP ILE ILE VAL GLU ILE
SEQRES 4 B 182 ALA CYS ILE PRO ILE LEU LEU LEU SER LEU ARG ARG GLY
SEQRES 5 B 182 LEU THR ALA GLY LEU VAL GLY GLY LEU ILE TRP GLY ILE
SEQRES 6 B 182 LEU SER MET ILE THR GLY HIS ALA TYR ILE LEU SER LEU
SEQRES 7 B 182 SER GLN ALA PHE LEU GLU TYR LEU VAL ALA PRO VAL SER
SEQRES 8 B 182 LEU GLY ILE ALA GLY LEU PHE ARG GLN LYS THR ALA PRO
SEQRES 9 B 182 LEU LYS LEU ALA PRO VAL LEU LEU GLY THR PHE VAL ALA
SEQRES 10 B 182 VAL LEU LEU LYS TYR PHE PHE HIS PHE ILE ALA GLY ILE
SEQRES 11 B 182 ILE PHE TRP SER GLN TYR ALA TRP LYS GLY TRP GLY ALA
SEQRES 12 B 182 VAL ALA TYR SER LEU ALA VAL ASN GLY ILE SER GLY ILE
SEQRES 13 B 182 LEU THR ALA ILE ALA ALA PHE VAL ILE LEU ILE ILE PHE
SEQRES 14 B 182 VAL LYS LYS PHE PRO LYS LEU PHE ILE HIS SER ASN TYR
HET XX8 A 201 17
HET BNG A 202 21
HET BNG A 203 21
HET BNG A 204 21
HET PG0 A 205 8
HET PG0 A 206 8
HET PEG A 207 7
HET PEG A 208 7
HET PEG A 209 7
HET PEG A 210 7
HET PEG A 211 7
HET PEG A 212 7
HET PG4 A 213 13
HET PGE A 214 10
HET PGE A 215 20
HET PGE A 216 10
HET PGE A 217 10
HET 1PE A 218 32
HET XX8 B 201 17
HET BNG B 202 21
HET BNG B 203 21
HET PG0 B 204 8
HET PEG B 205 7
HET PEG B 206 7
HET PG4 B 207 13
HET P33 B 208 22
HET PGE B 209 10
HET PGE B 210 10
HET 1PE B 211 16
HET CL B 212 1
HETNAM XX8 {3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)
HETNAM 2 XX8 METHYL]PHENYL}METHANOL
HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE
HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETNAM PG4 TETRAETHYLENE GLYCOL
HETNAM PGE TRIETHYLENE GLYCOL
HETNAM 1PE PENTAETHYLENE GLYCOL
HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
HETNAM CL CHLORIDE ION
HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D-
HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE
HETSYN PG0 PEG 6000
HETSYN 1PE PEG400
HETSYN P33 HEPTAETHYLENE GLYCOL; PEG330
FORMUL 3 XX8 2(C13 H15 N3 O)
FORMUL 4 BNG 5(C15 H30 O6)
FORMUL 7 PG0 3(C5 H12 O3)
FORMUL 9 PEG 8(C4 H10 O3)
FORMUL 15 PG4 2(C8 H18 O5)
FORMUL 16 PGE 6(C6 H14 O4)
FORMUL 20 1PE 2(C10 H22 O6)
FORMUL 28 P33 C14 H30 O8
FORMUL 32 CL CL 1-
FORMUL 33 HOH *46(H2 O)
HELIX 1 1 ASN A 7 SER A 25 1 19
HELIX 2 2 GLU A 38 ALA A 40 5 3
HELIX 3 3 CYS A 41 THR A 70 1 30
HELIX 4 4 SER A 77 LEU A 86 1 10
HELIX 5 5 LEU A 86 LEU A 92 1 7
HELIX 6 6 GLY A 93 ARG A 99 5 7
HELIX 7 7 LEU A 107 TRP A 133 1 27
HELIX 8 8 SER A 134 ALA A 137 5 4
HELIX 9 9 GLY A 142 PHE A 173 1 32
HELIX 10 10 PRO A 174 ILE A 178 5 5
HELIX 11 11 VAL B 8 SER B 25 1 18
HELIX 12 12 GLU B 38 ALA B 40 5 3
HELIX 13 13 CYS B 41 GLY B 52 1 12
HELIX 14 14 GLY B 52 THR B 70 1 19
HELIX 15 15 SER B 77 LEU B 86 1 10
HELIX 16 16 LEU B 86 SER B 91 1 6
HELIX 17 17 LEU B 92 ARG B 99 5 8
HELIX 18 18 LYS B 106 TRP B 133 1 28
HELIX 19 19 SER B 134 ALA B 137 5 4
HELIX 20 20 GLY B 142 PHE B 173 1 32
HELIX 21 21 PRO B 174 ILE B 178 5 5
SHEET 1 A 2 THR A 30 TYR A 32 0
SHEET 2 A 2 ILE A 35 ILE A 36 -1 O ILE A 35 N VAL A 31
SHEET 1 B 2 THR B 30 TYR B 32 0
SHEET 2 B 2 ILE B 35 ILE B 36 -1 O ILE B 35 N TYR B 32
CISPEP 1 ALA A 103 PRO A 104 0 -8.34
CISPEP 2 ALA B 103 PRO B 104 0 0.44
CRYST1 63.160 84.260 127.250 90.00 94.17 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015833 0.000000 0.001155 0.00000
SCALE2 0.000000 0.011868 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007879 0.00000