data_4N5T # _entry.id 4N5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4N5T pdb_00004n5t 10.2210/pdb4n5t/pdb RCSB RCSB082788 ? ? WWPDB D_1000082788 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-20 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 2 0 2023-11-15 4 'Structure model' 2 1 2024-11-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site 9 4 'Structure model' pdbx_entry_details 10 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_atom_id' 2 3 'Structure model' '_atom_site.label_atom_id' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.pdbx_value_order' 8 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 3 'Structure model' '_struct_ref_seq_dif.details' 19 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4N5T _pdbx_database_status.recvd_initial_deposition_date 2013-10-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Graves, B.J.' 1 'Lukacs, C.' 2 'Janson, C.A.' 3 # _citation.id primary _citation.title 'Stapled alpha-helical peptide drug development: a potent dual inhibitor of MDM2 and MDMX for p53-dependent cancer therapy.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first E3445 _citation.page_last E3454 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23946421 _citation.pdbx_database_id_DOI 10.1073/pnas.1303002110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chang, Y.S.' 1 ? primary 'Graves, B.' 2 ? primary 'Guerlavais, V.' 3 ? primary 'Tovar, C.' 4 ? primary 'Packman, K.' 5 ? primary 'To, K.H.' 6 ? primary 'Olson, K.A.' 7 ? primary 'Kesavan, K.' 8 ? primary 'Gangurde, P.' 9 ? primary 'Mukherjee, A.' 10 ? primary 'Baker, T.' 11 ? primary 'Darlak, K.' 12 ? primary 'Elkin, C.' 13 ? primary 'Filipovic, Z.' 14 ? primary 'Qureshi, F.Z.' 15 ? primary 'Cai, H.' 16 ? primary 'Berry, P.' 17 ? primary 'Feyfant, E.' 18 ? primary 'Shi, X.E.' 19 ? primary 'Horstick, J.' 20 ? primary 'Annis, D.A.' 21 ? primary 'Manning, A.M.' 22 ? primary 'Fotouhi, N.' 23 ? primary 'Nash, H.' 24 ? primary 'Vassilev, L.T.' 25 ? primary 'Sawyer, T.K.' 26 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein Mdm4' 10322.081 1 ? 'L46V, V95L' 'SWIB Domain (UNP Residues 15-106)' ? 2 polymer syn 'ATSP-7041 stapled-peptide' 1734.042 1 ? ? ? ? 3 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Double minute 4 protein, Mdm2-like p53-binding protein, Protein Mdmx, p53-binding protein Mdm4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;LPGEGTQVHPRAPLLQILKVAGAQEEVFTVKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPLY EMLKRNLVIL ; ;LPGEGTQVHPRAPLLQILKVAGAQEEVFTVKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPLY EMLKRNLVIL ; A ? 2 'polypeptide(L)' no yes '(ACE)LTF(0EH)EYWAQ(2JH)(MK8)SAA' XLTFXEYWAQXLSAA B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 PRO n 1 3 GLY n 1 4 GLU n 1 5 GLY n 1 6 THR n 1 7 GLN n 1 8 VAL n 1 9 HIS n 1 10 PRO n 1 11 ARG n 1 12 ALA n 1 13 PRO n 1 14 LEU n 1 15 LEU n 1 16 GLN n 1 17 ILE n 1 18 LEU n 1 19 LYS n 1 20 VAL n 1 21 ALA n 1 22 GLY n 1 23 ALA n 1 24 GLN n 1 25 GLU n 1 26 GLU n 1 27 VAL n 1 28 PHE n 1 29 THR n 1 30 VAL n 1 31 LYS n 1 32 GLU n 1 33 VAL n 1 34 MET n 1 35 HIS n 1 36 TYR n 1 37 LEU n 1 38 GLY n 1 39 GLN n 1 40 TYR n 1 41 ILE n 1 42 MET n 1 43 MET n 1 44 LYS n 1 45 GLN n 1 46 LEU n 1 47 TYR n 1 48 ASP n 1 49 LYS n 1 50 GLN n 1 51 ARG n 1 52 GLN n 1 53 HIS n 1 54 ILE n 1 55 VAL n 1 56 HIS n 1 57 CYS n 1 58 HIS n 1 59 ASP n 1 60 ASP n 1 61 PRO n 1 62 LEU n 1 63 GLY n 1 64 GLU n 1 65 LEU n 1 66 LEU n 1 67 GLU n 1 68 VAL n 1 69 GLY n 1 70 SER n 1 71 PHE n 1 72 SER n 1 73 VAL n 1 74 LYS n 1 75 ASN n 1 76 PRO n 1 77 SER n 1 78 PRO n 1 79 LEU n 1 80 TYR n 1 81 GLU n 1 82 MET n 1 83 LEU n 1 84 LYS n 1 85 ARG n 1 86 ASN n 1 87 LEU n 1 88 VAL n 1 89 ILE n 1 90 LEU n 2 1 ACE n 2 2 LEU n 2 3 THR n 2 4 PHE n 2 5 0EH n 2 6 GLU n 2 7 TYR n 2 8 TRP n 2 9 ALA n 2 10 GLN n 2 11 2JH n 2 12 MK8 n 2 13 SER n 2 14 ALA n 2 15 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'leopard danio, zebra danio, zebra fish' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mdm4, mdmx' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Danio rerio' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'ATSP-7041 was chemically synthesized and is loosely based on a sequence from p53' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0EH 'D-peptide linking' . '(2R)-2-amino-2-methylnonanoic acid' ? 'C10 H21 N O2' 187.279 2JH 'L-peptide linking' . 3-cyclobutyl-L-alanine ? 'C7 H13 N O2' 143.184 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MK8 'L-peptide linking' n 2-methyl-L-norleucine ? 'C7 H15 N O2' 145.199 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 17 17 LEU LEU A . n A 1 2 PRO 2 18 18 PRO PRO A . n A 1 3 GLY 3 19 19 GLY GLY A . n A 1 4 GLU 4 20 20 GLU GLU A . n A 1 5 GLY 5 21 21 GLY GLY A . n A 1 6 THR 6 22 22 THR THR A . n A 1 7 GLN 7 23 23 GLN GLN A . n A 1 8 VAL 8 24 24 VAL VAL A . n A 1 9 HIS 9 25 25 HIS HIS A . n A 1 10 PRO 10 26 26 PRO PRO A . n A 1 11 ARG 11 27 27 ARG ARG A . n A 1 12 ALA 12 28 28 ALA ALA A . n A 1 13 PRO 13 29 29 PRO PRO A . n A 1 14 LEU 14 30 30 LEU LEU A . n A 1 15 LEU 15 31 31 LEU LEU A . n A 1 16 GLN 16 32 32 GLN GLN A . n A 1 17 ILE 17 33 33 ILE ILE A . n A 1 18 LEU 18 34 34 LEU LEU A . n A 1 19 LYS 19 35 35 LYS LYS A . n A 1 20 VAL 20 36 36 VAL VAL A . n A 1 21 ALA 21 37 37 ALA ALA A . n A 1 22 GLY 22 38 38 GLY GLY A . n A 1 23 ALA 23 39 39 ALA ALA A . n A 1 24 GLN 24 40 40 GLN GLN A . n A 1 25 GLU 25 41 41 GLU GLU A . n A 1 26 GLU 26 42 42 GLU GLU A . n A 1 27 VAL 27 43 43 VAL VAL A . n A 1 28 PHE 28 44 44 PHE PHE A . n A 1 29 THR 29 45 45 THR THR A . n A 1 30 VAL 30 46 46 VAL VAL A . n A 1 31 LYS 31 47 47 LYS LYS A . n A 1 32 GLU 32 48 48 GLU GLU A . n A 1 33 VAL 33 49 49 VAL VAL A . n A 1 34 MET 34 50 50 MET MET A . n A 1 35 HIS 35 51 51 HIS HIS A . n A 1 36 TYR 36 52 52 TYR TYR A . n A 1 37 LEU 37 53 53 LEU LEU A . n A 1 38 GLY 38 54 54 GLY GLY A . n A 1 39 GLN 39 55 55 GLN GLN A . n A 1 40 TYR 40 56 56 TYR TYR A . n A 1 41 ILE 41 57 57 ILE ILE A . n A 1 42 MET 42 58 58 MET MET A . n A 1 43 MET 43 59 59 MET MET A . n A 1 44 LYS 44 60 60 LYS LYS A . n A 1 45 GLN 45 61 61 GLN GLN A . n A 1 46 LEU 46 62 62 LEU LEU A . n A 1 47 TYR 47 63 63 TYR TYR A . n A 1 48 ASP 48 64 64 ASP ASP A . n A 1 49 LYS 49 65 65 LYS LYS A . n A 1 50 GLN 50 66 66 GLN GLN A . n A 1 51 ARG 51 67 67 ARG ARG A . n A 1 52 GLN 52 68 68 GLN GLN A . n A 1 53 HIS 53 69 69 HIS HIS A . n A 1 54 ILE 54 70 70 ILE ILE A . n A 1 55 VAL 55 71 71 VAL VAL A . n A 1 56 HIS 56 72 72 HIS HIS A . n A 1 57 CYS 57 73 73 CYS CYS A . n A 1 58 HIS 58 74 74 HIS HIS A . n A 1 59 ASP 59 75 75 ASP ASP A . n A 1 60 ASP 60 76 76 ASP ASP A . n A 1 61 PRO 61 77 77 PRO PRO A . n A 1 62 LEU 62 78 78 LEU LEU A . n A 1 63 GLY 63 79 79 GLY GLY A . n A 1 64 GLU 64 80 80 GLU GLU A . n A 1 65 LEU 65 81 81 LEU LEU A . n A 1 66 LEU 66 82 82 LEU LEU A . n A 1 67 GLU 67 83 83 GLU GLU A . n A 1 68 VAL 68 84 84 VAL VAL A . n A 1 69 GLY 69 85 85 GLY GLY A . n A 1 70 SER 70 86 86 SER SER A . n A 1 71 PHE 71 87 87 PHE PHE A . n A 1 72 SER 72 88 88 SER SER A . n A 1 73 VAL 73 89 89 VAL VAL A . n A 1 74 LYS 74 90 90 LYS LYS A . n A 1 75 ASN 75 91 91 ASN ASN A . n A 1 76 PRO 76 92 92 PRO PRO A . n A 1 77 SER 77 93 93 SER SER A . n A 1 78 PRO 78 94 94 PRO PRO A . n A 1 79 LEU 79 95 95 LEU LEU A . n A 1 80 TYR 80 96 96 TYR TYR A . n A 1 81 GLU 81 97 97 GLU GLU A . n A 1 82 MET 82 98 98 MET MET A . n A 1 83 LEU 83 99 99 LEU LEU A . n A 1 84 LYS 84 100 100 LYS LYS A . n A 1 85 ARG 85 101 101 ARG ARG A . n A 1 86 ASN 86 102 102 ASN ASN A . n A 1 87 LEU 87 103 103 LEU LEU A . n A 1 88 VAL 88 104 104 VAL VAL A . n A 1 89 ILE 89 105 105 ILE ILE A . n A 1 90 LEU 90 106 106 LEU LEU A . n B 2 1 ACE 1 16 16 ACE ACE B . n B 2 2 LEU 2 17 17 LEU LEU B . n B 2 3 THR 3 18 18 THR THR B . n B 2 4 PHE 4 19 19 PHE PHE B . n B 2 5 0EH 5 20 20 0EH 0EH B . n B 2 6 GLU 6 21 21 GLU GLU B . n B 2 7 TYR 7 22 22 TYR TYR B . n B 2 8 TRP 8 23 23 TRP TRP B . n B 2 9 ALA 9 24 24 ALA ALA B . n B 2 10 GLN 10 25 25 GLN GLN B . n B 2 11 2JH 11 26 26 2JH 2JH B . n B 2 12 MK8 12 27 27 MK8 MK8 B . n B 2 13 SER 13 28 28 SER SER B . n B 2 14 ALA 14 29 29 ALA ALA B . n B 2 15 ALA 15 30 30 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 201 1 HOH HOH A . C 3 HOH 2 202 3 HOH HOH A . C 3 HOH 3 203 5 HOH HOH A . C 3 HOH 4 204 6 HOH HOH A . C 3 HOH 5 205 7 HOH HOH A . C 3 HOH 6 206 8 HOH HOH A . C 3 HOH 7 207 11 HOH HOH A . C 3 HOH 8 208 12 HOH HOH A . C 3 HOH 9 209 14 HOH HOH A . C 3 HOH 10 210 15 HOH HOH A . C 3 HOH 11 211 16 HOH HOH A . C 3 HOH 12 212 17 HOH HOH A . C 3 HOH 13 213 18 HOH HOH A . C 3 HOH 14 214 19 HOH HOH A . C 3 HOH 15 215 20 HOH HOH A . C 3 HOH 16 216 21 HOH HOH A . C 3 HOH 17 217 23 HOH HOH A . C 3 HOH 18 218 24 HOH HOH A . C 3 HOH 19 219 25 HOH HOH A . C 3 HOH 20 220 26 HOH HOH A . C 3 HOH 21 221 27 HOH HOH A . C 3 HOH 22 222 28 HOH HOH A . C 3 HOH 23 223 29 HOH HOH A . C 3 HOH 24 224 30 HOH HOH A . C 3 HOH 25 225 33 HOH HOH A . C 3 HOH 26 226 34 HOH HOH A . C 3 HOH 27 227 35 HOH HOH A . C 3 HOH 28 228 36 HOH HOH A . C 3 HOH 29 229 38 HOH HOH A . C 3 HOH 30 230 39 HOH HOH A . C 3 HOH 31 231 40 HOH HOH A . C 3 HOH 32 232 41 HOH HOH A . C 3 HOH 33 233 42 HOH HOH A . C 3 HOH 34 234 43 HOH HOH A . C 3 HOH 35 235 44 HOH HOH A . C 3 HOH 36 236 46 HOH HOH A . C 3 HOH 37 237 47 HOH HOH A . C 3 HOH 38 238 48 HOH HOH A . C 3 HOH 39 239 49 HOH HOH A . C 3 HOH 40 240 50 HOH HOH A . C 3 HOH 41 241 52 HOH HOH A . C 3 HOH 42 242 53 HOH HOH A . C 3 HOH 43 243 54 HOH HOH A . C 3 HOH 44 244 55 HOH HOH A . C 3 HOH 45 245 56 HOH HOH A . C 3 HOH 46 246 57 HOH HOH A . C 3 HOH 47 247 58 HOH HOH A . C 3 HOH 48 248 59 HOH HOH A . C 3 HOH 49 249 60 HOH HOH A . C 3 HOH 50 250 61 HOH HOH A . C 3 HOH 51 251 67 HOH HOH A . C 3 HOH 52 252 68 HOH HOH A . C 3 HOH 53 253 69 HOH HOH A . C 3 HOH 54 254 70 HOH HOH A . C 3 HOH 55 255 72 HOH HOH A . C 3 HOH 56 256 73 HOH HOH A . C 3 HOH 57 257 74 HOH HOH A . C 3 HOH 58 258 75 HOH HOH A . C 3 HOH 59 259 76 HOH HOH A . C 3 HOH 60 260 78 HOH HOH A . C 3 HOH 61 261 80 HOH HOH A . C 3 HOH 62 262 81 HOH HOH A . C 3 HOH 63 263 82 HOH HOH A . C 3 HOH 64 264 83 HOH HOH A . C 3 HOH 65 265 84 HOH HOH A . C 3 HOH 66 266 86 HOH HOH A . C 3 HOH 67 267 87 HOH HOH A . C 3 HOH 68 268 88 HOH HOH A . C 3 HOH 69 269 89 HOH HOH A . C 3 HOH 70 270 90 HOH HOH A . C 3 HOH 71 271 92 HOH HOH A . C 3 HOH 72 272 93 HOH HOH A . C 3 HOH 73 273 94 HOH HOH A . C 3 HOH 74 274 95 HOH HOH A . C 3 HOH 75 275 96 HOH HOH A . C 3 HOH 76 276 97 HOH HOH A . C 3 HOH 77 277 98 HOH HOH A . C 3 HOH 78 278 99 HOH HOH A . C 3 HOH 79 279 100 HOH HOH A . C 3 HOH 80 280 101 HOH HOH A . C 3 HOH 81 281 102 HOH HOH A . C 3 HOH 82 282 103 HOH HOH A . C 3 HOH 83 283 104 HOH HOH A . C 3 HOH 84 284 105 HOH HOH A . C 3 HOH 85 285 107 HOH HOH A . C 3 HOH 86 286 108 HOH HOH A . C 3 HOH 87 287 109 HOH HOH A . C 3 HOH 88 288 110 HOH HOH A . C 3 HOH 89 289 111 HOH HOH A . C 3 HOH 90 290 112 HOH HOH A . C 3 HOH 91 291 114 HOH HOH A . C 3 HOH 92 292 115 HOH HOH A . C 3 HOH 93 293 116 HOH HOH A . C 3 HOH 94 294 117 HOH HOH A . C 3 HOH 95 295 118 HOH HOH A . C 3 HOH 96 296 120 HOH HOH A . C 3 HOH 97 297 121 HOH HOH A . C 3 HOH 98 298 122 HOH HOH A . C 3 HOH 99 299 123 HOH HOH A . C 3 HOH 100 300 124 HOH HOH A . C 3 HOH 101 301 125 HOH HOH A . D 3 HOH 1 101 4 HOH HOH B . D 3 HOH 2 102 2 HOH HOH B . D 3 HOH 3 103 9 HOH HOH B . D 3 HOH 4 104 10 HOH HOH B . D 3 HOH 5 105 13 HOH HOH B . D 3 HOH 6 106 22 HOH HOH B . D 3 HOH 7 107 31 HOH HOH B . D 3 HOH 8 108 32 HOH HOH B . D 3 HOH 9 109 37 HOH HOH B . D 3 HOH 10 110 45 HOH HOH B . D 3 HOH 11 111 51 HOH HOH B . D 3 HOH 12 112 62 HOH HOH B . D 3 HOH 13 113 63 HOH HOH B . D 3 HOH 14 114 64 HOH HOH B . D 3 HOH 15 115 65 HOH HOH B . D 3 HOH 16 116 66 HOH HOH B . D 3 HOH 17 117 71 HOH HOH B . D 3 HOH 18 118 77 HOH HOH B . D 3 HOH 19 119 79 HOH HOH B . D 3 HOH 20 120 85 HOH HOH B . D 3 HOH 21 121 91 HOH HOH B . D 3 HOH 22 122 106 HOH HOH B . D 3 HOH 23 123 113 HOH HOH B . D 3 HOH 24 124 119 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DA+ 'data collection' . ? 1 MOLREP phasing . ? 2 CNX refinement 2005 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 TRUNCATE 'data scaling' . ? 6 # _cell.entry_id 4N5T _cell.length_a 81.585 _cell.length_b 108.535 _cell.length_c 30.964 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4N5T _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4N5T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '15% PEG 4000, 0.1M sodium citrate, 0.2M ammonium sulfate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 278K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-07-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.99980 # _reflns.entry_id 4N5T _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.79 _reflns.d_resolution_high 1.47 _reflns.number_obs 23886 _reflns.number_all 23886 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.5 _reflns.B_iso_Wilson_estimate 26.3 _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.47 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4N5T _refine.ls_number_reflns_obs 15537 _refine.ls_number_reflns_all 15537 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1652927.99 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.07 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_all 0.210 _refine.ls_R_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 799 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.4 _refine.aniso_B[1][1] -2.56 _refine.aniso_B[2][2] 4.06 _refine.aniso_B[3][3] -1.50 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.331126 _refine.solvent_model_param_bsol 46.3115 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4N5T _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.15 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.22 _refine_analyze.Luzzati_sigma_a_free 0.15 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 849 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 974 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 33.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.004 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.6 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 18.7 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.65 ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it 1.47 1.50 ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it 2.41 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scbond_it 2.24 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scangle_it 3.49 2.50 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 2408 _refine_ls_shell.R_factor_R_work 0.280 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.R_factor_R_free 0.311 _refine_ls_shell.R_factor_R_free_error 0.027 _refine_ls_shell.percent_reflns_R_free 5.2 _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 4N5T _pdbx_refine.R_factor_all_no_cutoff 0.218 _pdbx_refine.R_factor_obs_no_cutoff 0.217 _pdbx_refine.free_R_factor_no_cutoff 0.237 _pdbx_refine.free_R_error_no_cutoff 0.008 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.1 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 799 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 carbohydrate.par carbohydrate.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 6101-sp1.prx 6101-sp1.tpx 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 4N5T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4N5T _struct.title 'The 1.7A Crystal Structure of MDMX with a Stapled Peptide, ATSP-7041' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4N5T _struct_keywords.pdbx_keywords 'CELL CYCLE/CELL CYCLE INHIBITOR' _struct_keywords.text 'MDM4, p53, apoptosis, cell cycle, p53 antagonist, nucleus, CELL CYCLE-CELL CYCLE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MDM4_DANRE Q7ZUW7 1 ;LPGEGTQVHPRAPLLQILKVAGAQEEVFTLKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPVY EMLKRNLVIL ; 17 ? 2 PDB 4N5T 4N5T 2 XLTFXEYWAQXLSAA ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4N5T A 1 ? 90 ? Q7ZUW7 17 ? 106 ? 17 106 2 2 4N5T B 1 ? 15 ? 4N5T 16 ? 30 ? 16 30 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4N5T VAL A 30 ? UNP Q7ZUW7 LEU 46 'engineered mutation' 46 1 1 4N5T LEU A 79 ? UNP Q7ZUW7 VAL 95 'engineered mutation' 95 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1360 ? 1 MORE -10 ? 1 'SSA (A^2)' 5530 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 11 ? ALA A 21 ? ARG A 27 ALA A 37 1 ? 11 HELX_P HELX_P2 2 VAL A 30 ? LYS A 44 ? VAL A 46 LYS A 60 1 ? 15 HELX_P HELX_P3 3 ASP A 60 ? GLU A 67 ? ASP A 76 GLU A 83 1 ? 8 HELX_P HELX_P4 4 PRO A 76 ? ASN A 86 ? PRO A 92 ASN A 102 1 ? 11 HELX_P HELX_P5 5 THR B 3 ? PHE B 4 ? THR B 18 PHE B 19 5 ? 2 HELX_P HELX_P6 6 GLU B 6 ? GLU B 6 ? GLU B 21 GLU B 21 5 ? 1 HELX_P HELX_P7 7 TYR B 7 ? ALA B 15 ? TYR B 22 ALA B 30 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ACE 1 C ? ? ? 1_555 B LEU 2 N ? ? B ACE 16 B LEU 17 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? B PHE 4 C ? ? ? 1_555 B 0EH 5 N ? ? B PHE 19 B 0EH 20 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? B 0EH 5 C ? ? ? 1_555 B GLU 6 N ? ? B 0EH 20 B GLU 21 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale none ? B 0EH 5 CAT ? ? ? 1_555 B MK8 12 CE ? ? B 0EH 20 B MK8 27 1_555 ? ? ? ? ? ? ? 1.340 doub ? covale5 covale both ? B GLN 10 C ? ? ? 1_555 B 2JH 11 N ? ? B GLN 25 B 2JH 26 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? B 2JH 11 C ? ? ? 1_555 B MK8 12 N ? ? B 2JH 26 B MK8 27 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? B MK8 12 C ? ? ? 1_555 B SER 13 N ? ? B MK8 27 B SER 28 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MK8 B 12 ? . . . . MK8 B 27 ? 1_555 . . . . . . . LEU 1 MK8 Norleucine 'Named protein modification' 2 MK8 B 12 ? . . . . MK8 B 27 ? 1_555 . . . . . . . LEU 2 MK8 Methylation 'Named protein modification' 3 0EH B 5 ? . . . . 0EH B 20 ? 1_555 . . . . . . . ? 1 0EH None 'Non-standard residue' 4 2JH B 11 ? . . . . 2JH B 26 ? 1_555 . . . . . . . ? 1 2JH None 'Non-standard residue' 5 ACE B 1 ? LEU B 2 ? ACE B 16 ? 1_555 LEU B 17 ? 1_555 . . LEU 14 ACE None 'Terminal acetylation' 6 0EH B 5 ? MK8 B 12 ? 0EH B 20 ? 1_555 MK8 B 27 ? 1_555 CAT CE . . . None 'Non-standard linkage' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 28 ? THR A 29 ? PHE A 44 THR A 45 A 2 GLN A 7 ? PRO A 10 ? GLN A 23 PRO A 26 A 3 LEU A 87 ? ILE A 89 ? LEU A 103 ILE A 105 B 1 ILE A 54 ? HIS A 56 ? ILE A 70 HIS A 72 B 2 SER A 70 ? SER A 72 ? SER A 86 SER A 88 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 28 ? O PHE A 44 N VAL A 8 ? N VAL A 24 A 2 3 N HIS A 9 ? N HIS A 25 O VAL A 88 ? O VAL A 104 B 1 2 N VAL A 55 ? N VAL A 71 O PHE A 71 ? O PHE A 87 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id 2JH _struct_site.pdbx_auth_seq_id 26 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE 2JH B 26' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 MET A 34 ? MET A 50 . ? 1_555 ? 2 AC1 12 VAL A 73 ? VAL A 89 . ? 1_555 ? 3 AC1 12 LEU A 79 ? LEU A 95 . ? 1_555 ? 4 AC1 12 TYR A 80 ? TYR A 96 . ? 1_555 ? 5 AC1 12 TYR B 7 ? TYR B 22 . ? 1_555 ? 6 AC1 12 TRP B 8 ? TRP B 23 . ? 1_555 ? 7 AC1 12 ALA B 9 ? ALA B 24 . ? 1_555 ? 8 AC1 12 GLN B 10 ? GLN B 25 . ? 1_555 ? 9 AC1 12 MK8 B 12 ? MK8 B 27 . ? 1_555 ? 10 AC1 12 SER B 13 ? SER B 28 . ? 1_555 ? 11 AC1 12 ALA B 14 ? ALA B 29 . ? 1_555 ? 12 AC1 12 ALA B 15 ? ALA B 30 . ? 1_555 ? # _pdbx_entry_details.entry_id 4N5T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_molecule_features.prd_id PRD_001189 _pdbx_molecule_features.name 'ATSP-7041 stapled-peptide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Enzyme inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001189 _pdbx_molecule.asym_id B # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MK8 _pdbx_struct_mod_residue.label_seq_id 12 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id MK8 _pdbx_struct_mod_residue.auth_seq_id 27 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LEU _pdbx_struct_mod_residue.details 2-METHYL-L-NORLEUCINE # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 243 ? C HOH . 2 1 A HOH 284 ? C HOH . 3 1 A HOH 295 ? C HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0EH O O N N 1 0EH C C N N 2 0EH CA C N R 3 0EH CAA C N N 4 0EH CAB C N N 5 0EH N N N N 6 0EH CAO C N N 7 0EH CAP C N N 8 0EH CAQ C N N 9 0EH CAR C N N 10 0EH CAS C N N 11 0EH CAT C N N 12 0EH H1 H N N 13 0EH H3 H N N 14 0EH H4 H N N 15 0EH H5 H N N 16 0EH H6 H N N 17 0EH H H N N 18 0EH H2 H N N 19 0EH H10 H N N 20 0EH H11 H N N 21 0EH H12 H N N 22 0EH H13 H N N 23 0EH H14 H N N 24 0EH H15 H N N 25 0EH H16 H N N 26 0EH H17 H N N 27 0EH H18 H N N 28 0EH H19 H N N 29 0EH H20 H N N 30 0EH H21 H N N 31 0EH H22 H N N 32 0EH OXT O N N 33 0EH HXT H N N 34 2JH N N N N 35 2JH CA C N S 36 2JH CB C N N 37 2JH C C N N 38 2JH O O N N 39 2JH CG C N N 40 2JH CD1 C N N 41 2JH CD2 C N N 42 2JH CE C N N 43 2JH H H N N 44 2JH H2 H N N 45 2JH HA H N N 46 2JH H5 H N N 47 2JH H6 H N N 48 2JH H8 H N N 49 2JH H9 H N N 50 2JH H10 H N N 51 2JH H11 H N N 52 2JH H12 H N N 53 2JH H13 H N N 54 2JH H14 H N N 55 2JH OXT O N N 56 2JH HXT H N N 57 ACE C C N N 58 ACE O O N N 59 ACE CH3 C N N 60 ACE H H N N 61 ACE H1 H N N 62 ACE H2 H N N 63 ACE H3 H N N 64 ALA N N N N 65 ALA CA C N S 66 ALA C C N N 67 ALA O O N N 68 ALA CB C N N 69 ALA OXT O N N 70 ALA H H N N 71 ALA H2 H N N 72 ALA HA H N N 73 ALA HB1 H N N 74 ALA HB2 H N N 75 ALA HB3 H N N 76 ALA HXT H N N 77 ARG N N N N 78 ARG CA C N S 79 ARG C C N N 80 ARG O O N N 81 ARG CB C N N 82 ARG CG C N N 83 ARG CD C N N 84 ARG NE N N N 85 ARG CZ C N N 86 ARG NH1 N N N 87 ARG NH2 N N N 88 ARG OXT O N N 89 ARG H H N N 90 ARG H2 H N N 91 ARG HA H N N 92 ARG HB2 H N N 93 ARG HB3 H N N 94 ARG HG2 H N N 95 ARG HG3 H N N 96 ARG HD2 H N N 97 ARG HD3 H N N 98 ARG HE H N N 99 ARG HH11 H N N 100 ARG HH12 H N N 101 ARG HH21 H N N 102 ARG HH22 H N N 103 ARG HXT H N N 104 ASN N N N N 105 ASN CA C N S 106 ASN C C N N 107 ASN O O N N 108 ASN CB C N N 109 ASN CG C N N 110 ASN OD1 O N N 111 ASN ND2 N N N 112 ASN OXT O N N 113 ASN H H N N 114 ASN H2 H N N 115 ASN HA H N N 116 ASN HB2 H N N 117 ASN HB3 H N N 118 ASN HD21 H N N 119 ASN HD22 H N N 120 ASN HXT H N N 121 ASP N N N N 122 ASP CA C N S 123 ASP C C N N 124 ASP O O N N 125 ASP CB C N N 126 ASP CG C N N 127 ASP OD1 O N N 128 ASP OD2 O N N 129 ASP OXT O N N 130 ASP H H N N 131 ASP H2 H N N 132 ASP HA H N N 133 ASP HB2 H N N 134 ASP HB3 H N N 135 ASP HD2 H N N 136 ASP HXT H N N 137 CYS N N N N 138 CYS CA C N R 139 CYS C C N N 140 CYS O O N N 141 CYS CB C N N 142 CYS SG S N N 143 CYS OXT O N N 144 CYS H H N N 145 CYS H2 H N N 146 CYS HA H N N 147 CYS HB2 H N N 148 CYS HB3 H N N 149 CYS HG H N N 150 CYS HXT H N N 151 GLN N N N N 152 GLN CA C N S 153 GLN C C N N 154 GLN O O N N 155 GLN CB C N N 156 GLN CG C N N 157 GLN CD C N N 158 GLN OE1 O N N 159 GLN NE2 N N N 160 GLN OXT O N N 161 GLN H H N N 162 GLN H2 H N N 163 GLN HA H N N 164 GLN HB2 H N N 165 GLN HB3 H N N 166 GLN HG2 H N N 167 GLN HG3 H N N 168 GLN HE21 H N N 169 GLN HE22 H N N 170 GLN HXT H N N 171 GLU N N N N 172 GLU CA C N S 173 GLU C C N N 174 GLU O O N N 175 GLU CB C N N 176 GLU CG C N N 177 GLU CD C N N 178 GLU OE1 O N N 179 GLU OE2 O N N 180 GLU OXT O N N 181 GLU H H N N 182 GLU H2 H N N 183 GLU HA H N N 184 GLU HB2 H N N 185 GLU HB3 H N N 186 GLU HG2 H N N 187 GLU HG3 H N N 188 GLU HE2 H N N 189 GLU HXT H N N 190 GLY N N N N 191 GLY CA C N N 192 GLY C C N N 193 GLY O O N N 194 GLY OXT O N N 195 GLY H H N N 196 GLY H2 H N N 197 GLY HA2 H N N 198 GLY HA3 H N N 199 GLY HXT H N N 200 HIS N N N N 201 HIS CA C N S 202 HIS C C N N 203 HIS O O N N 204 HIS CB C N N 205 HIS CG C Y N 206 HIS ND1 N Y N 207 HIS CD2 C Y N 208 HIS CE1 C Y N 209 HIS NE2 N Y N 210 HIS OXT O N N 211 HIS H H N N 212 HIS H2 H N N 213 HIS HA H N N 214 HIS HB2 H N N 215 HIS HB3 H N N 216 HIS HD1 H N N 217 HIS HD2 H N N 218 HIS HE1 H N N 219 HIS HE2 H N N 220 HIS HXT H N N 221 HOH O O N N 222 HOH H1 H N N 223 HOH H2 H N N 224 ILE N N N N 225 ILE CA C N S 226 ILE C C N N 227 ILE O O N N 228 ILE CB C N S 229 ILE CG1 C N N 230 ILE CG2 C N N 231 ILE CD1 C N N 232 ILE OXT O N N 233 ILE H H N N 234 ILE H2 H N N 235 ILE HA H N N 236 ILE HB H N N 237 ILE HG12 H N N 238 ILE HG13 H N N 239 ILE HG21 H N N 240 ILE HG22 H N N 241 ILE HG23 H N N 242 ILE HD11 H N N 243 ILE HD12 H N N 244 ILE HD13 H N N 245 ILE HXT H N N 246 LEU N N N N 247 LEU CA C N S 248 LEU C C N N 249 LEU O O N N 250 LEU CB C N N 251 LEU CG C N N 252 LEU CD1 C N N 253 LEU CD2 C N N 254 LEU OXT O N N 255 LEU H H N N 256 LEU H2 H N N 257 LEU HA H N N 258 LEU HB2 H N N 259 LEU HB3 H N N 260 LEU HG H N N 261 LEU HD11 H N N 262 LEU HD12 H N N 263 LEU HD13 H N N 264 LEU HD21 H N N 265 LEU HD22 H N N 266 LEU HD23 H N N 267 LEU HXT H N N 268 LYS N N N N 269 LYS CA C N S 270 LYS C C N N 271 LYS O O N N 272 LYS CB C N N 273 LYS CG C N N 274 LYS CD C N N 275 LYS CE C N N 276 LYS NZ N N N 277 LYS OXT O N N 278 LYS H H N N 279 LYS H2 H N N 280 LYS HA H N N 281 LYS HB2 H N N 282 LYS HB3 H N N 283 LYS HG2 H N N 284 LYS HG3 H N N 285 LYS HD2 H N N 286 LYS HD3 H N N 287 LYS HE2 H N N 288 LYS HE3 H N N 289 LYS HZ1 H N N 290 LYS HZ2 H N N 291 LYS HZ3 H N N 292 LYS HXT H N N 293 MET N N N N 294 MET CA C N S 295 MET C C N N 296 MET O O N N 297 MET CB C N N 298 MET CG C N N 299 MET SD S N N 300 MET CE C N N 301 MET OXT O N N 302 MET H H N N 303 MET H2 H N N 304 MET HA H N N 305 MET HB2 H N N 306 MET HB3 H N N 307 MET HG2 H N N 308 MET HG3 H N N 309 MET HE1 H N N 310 MET HE2 H N N 311 MET HE3 H N N 312 MET HXT H N N 313 MK8 C C N N 314 MK8 N N N N 315 MK8 O O N N 316 MK8 CA C N S 317 MK8 CB C N N 318 MK8 CD C N N 319 MK8 CE C N N 320 MK8 CG C N N 321 MK8 CB1 C N N 322 MK8 OXT O N N 323 MK8 H H N N 324 MK8 H2 H N N 325 MK8 HB H N N 326 MK8 HBA H N N 327 MK8 HD H N N 328 MK8 HDA H N N 329 MK8 HE H N N 330 MK8 HEA H N N 331 MK8 HEB H N N 332 MK8 HG H N N 333 MK8 HGA H N N 334 MK8 HB1 H N N 335 MK8 HB1A H N N 336 MK8 HB1B H N N 337 MK8 HXT H N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 THR N N N N 393 THR CA C N S 394 THR C C N N 395 THR O O N N 396 THR CB C N R 397 THR OG1 O N N 398 THR CG2 C N N 399 THR OXT O N N 400 THR H H N N 401 THR H2 H N N 402 THR HA H N N 403 THR HB H N N 404 THR HG1 H N N 405 THR HG21 H N N 406 THR HG22 H N N 407 THR HG23 H N N 408 THR HXT H N N 409 TRP N N N N 410 TRP CA C N S 411 TRP C C N N 412 TRP O O N N 413 TRP CB C N N 414 TRP CG C Y N 415 TRP CD1 C Y N 416 TRP CD2 C Y N 417 TRP NE1 N Y N 418 TRP CE2 C Y N 419 TRP CE3 C Y N 420 TRP CZ2 C Y N 421 TRP CZ3 C Y N 422 TRP CH2 C Y N 423 TRP OXT O N N 424 TRP H H N N 425 TRP H2 H N N 426 TRP HA H N N 427 TRP HB2 H N N 428 TRP HB3 H N N 429 TRP HD1 H N N 430 TRP HE1 H N N 431 TRP HE3 H N N 432 TRP HZ2 H N N 433 TRP HZ3 H N N 434 TRP HH2 H N N 435 TRP HXT H N N 436 TYR N N N N 437 TYR CA C N S 438 TYR C C N N 439 TYR O O N N 440 TYR CB C N N 441 TYR CG C Y N 442 TYR CD1 C Y N 443 TYR CD2 C Y N 444 TYR CE1 C Y N 445 TYR CE2 C Y N 446 TYR CZ C Y N 447 TYR OH O N N 448 TYR OXT O N N 449 TYR H H N N 450 TYR H2 H N N 451 TYR HA H N N 452 TYR HB2 H N N 453 TYR HB3 H N N 454 TYR HD1 H N N 455 TYR HD2 H N N 456 TYR HE1 H N N 457 TYR HE2 H N N 458 TYR HH H N N 459 TYR HXT H N N 460 VAL N N N N 461 VAL CA C N S 462 VAL C C N N 463 VAL O O N N 464 VAL CB C N N 465 VAL CG1 C N N 466 VAL CG2 C N N 467 VAL OXT O N N 468 VAL H H N N 469 VAL H2 H N N 470 VAL HA H N N 471 VAL HB H N N 472 VAL HG11 H N N 473 VAL HG12 H N N 474 VAL HG13 H N N 475 VAL HG21 H N N 476 VAL HG22 H N N 477 VAL HG23 H N N 478 VAL HXT H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0EH CAT CAS sing N N 1 0EH O C doub N N 2 0EH CAR CAS sing N N 3 0EH CAR CAQ sing N N 4 0EH C CA sing N N 5 0EH CAA CA sing N N 6 0EH CAO CAP sing N N 7 0EH CAO CAB sing N N 8 0EH CAQ CAP sing N N 9 0EH CA CAB sing N N 10 0EH CA N sing N N 11 0EH CAA H1 sing N N 12 0EH CAA H3 sing N N 13 0EH CAA H4 sing N N 14 0EH CAB H5 sing N N 15 0EH CAB H6 sing N N 16 0EH N H sing N N 17 0EH N H2 sing N N 18 0EH CAO H10 sing N N 19 0EH CAO H11 sing N N 20 0EH CAP H12 sing N N 21 0EH CAP H13 sing N N 22 0EH CAQ H14 sing N N 23 0EH CAQ H15 sing N N 24 0EH CAR H16 sing N N 25 0EH CAR H17 sing N N 26 0EH CAS H18 sing N N 27 0EH CAS H19 sing N N 28 0EH CAT H20 sing N N 29 0EH CAT H21 sing N N 30 0EH CAT H22 sing N N 31 0EH C OXT sing N N 32 0EH OXT HXT sing N N 33 2JH N CA sing N N 34 2JH CA C sing N N 35 2JH CA CB sing N N 36 2JH O C doub N N 37 2JH CB CG sing N N 38 2JH CG CD2 sing N N 39 2JH CG CD1 sing N N 40 2JH CD2 CE sing N N 41 2JH CD1 CE sing N N 42 2JH N H sing N N 43 2JH N H2 sing N N 44 2JH CA HA sing N N 45 2JH CB H5 sing N N 46 2JH CB H6 sing N N 47 2JH CG H8 sing N N 48 2JH CD1 H9 sing N N 49 2JH CD1 H10 sing N N 50 2JH CD2 H11 sing N N 51 2JH CD2 H12 sing N N 52 2JH CE H13 sing N N 53 2JH CE H14 sing N N 54 2JH C OXT sing N N 55 2JH OXT HXT sing N N 56 ACE C O doub N N 57 ACE C CH3 sing N N 58 ACE C H sing N N 59 ACE CH3 H1 sing N N 60 ACE CH3 H2 sing N N 61 ACE CH3 H3 sing N N 62 ALA N CA sing N N 63 ALA N H sing N N 64 ALA N H2 sing N N 65 ALA CA C sing N N 66 ALA CA CB sing N N 67 ALA CA HA sing N N 68 ALA C O doub N N 69 ALA C OXT sing N N 70 ALA CB HB1 sing N N 71 ALA CB HB2 sing N N 72 ALA CB HB3 sing N N 73 ALA OXT HXT sing N N 74 ARG N CA sing N N 75 ARG N H sing N N 76 ARG N H2 sing N N 77 ARG CA C sing N N 78 ARG CA CB sing N N 79 ARG CA HA sing N N 80 ARG C O doub N N 81 ARG C OXT sing N N 82 ARG CB CG sing N N 83 ARG CB HB2 sing N N 84 ARG CB HB3 sing N N 85 ARG CG CD sing N N 86 ARG CG HG2 sing N N 87 ARG CG HG3 sing N N 88 ARG CD NE sing N N 89 ARG CD HD2 sing N N 90 ARG CD HD3 sing N N 91 ARG NE CZ sing N N 92 ARG NE HE sing N N 93 ARG CZ NH1 sing N N 94 ARG CZ NH2 doub N N 95 ARG NH1 HH11 sing N N 96 ARG NH1 HH12 sing N N 97 ARG NH2 HH21 sing N N 98 ARG NH2 HH22 sing N N 99 ARG OXT HXT sing N N 100 ASN N CA sing N N 101 ASN N H sing N N 102 ASN N H2 sing N N 103 ASN CA C sing N N 104 ASN CA CB sing N N 105 ASN CA HA sing N N 106 ASN C O doub N N 107 ASN C OXT sing N N 108 ASN CB CG sing N N 109 ASN CB HB2 sing N N 110 ASN CB HB3 sing N N 111 ASN CG OD1 doub N N 112 ASN CG ND2 sing N N 113 ASN ND2 HD21 sing N N 114 ASN ND2 HD22 sing N N 115 ASN OXT HXT sing N N 116 ASP N CA sing N N 117 ASP N H sing N N 118 ASP N H2 sing N N 119 ASP CA C sing N N 120 ASP CA CB sing N N 121 ASP CA HA sing N N 122 ASP C O doub N N 123 ASP C OXT sing N N 124 ASP CB CG sing N N 125 ASP CB HB2 sing N N 126 ASP CB HB3 sing N N 127 ASP CG OD1 doub N N 128 ASP CG OD2 sing N N 129 ASP OD2 HD2 sing N N 130 ASP OXT HXT sing N N 131 CYS N CA sing N N 132 CYS N H sing N N 133 CYS N H2 sing N N 134 CYS CA C sing N N 135 CYS CA CB sing N N 136 CYS CA HA sing N N 137 CYS C O doub N N 138 CYS C OXT sing N N 139 CYS CB SG sing N N 140 CYS CB HB2 sing N N 141 CYS CB HB3 sing N N 142 CYS SG HG sing N N 143 CYS OXT HXT sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 HOH O H1 sing N N 212 HOH O H2 sing N N 213 ILE N CA sing N N 214 ILE N H sing N N 215 ILE N H2 sing N N 216 ILE CA C sing N N 217 ILE CA CB sing N N 218 ILE CA HA sing N N 219 ILE C O doub N N 220 ILE C OXT sing N N 221 ILE CB CG1 sing N N 222 ILE CB CG2 sing N N 223 ILE CB HB sing N N 224 ILE CG1 CD1 sing N N 225 ILE CG1 HG12 sing N N 226 ILE CG1 HG13 sing N N 227 ILE CG2 HG21 sing N N 228 ILE CG2 HG22 sing N N 229 ILE CG2 HG23 sing N N 230 ILE CD1 HD11 sing N N 231 ILE CD1 HD12 sing N N 232 ILE CD1 HD13 sing N N 233 ILE OXT HXT sing N N 234 LEU N CA sing N N 235 LEU N H sing N N 236 LEU N H2 sing N N 237 LEU CA C sing N N 238 LEU CA CB sing N N 239 LEU CA HA sing N N 240 LEU C O doub N N 241 LEU C OXT sing N N 242 LEU CB CG sing N N 243 LEU CB HB2 sing N N 244 LEU CB HB3 sing N N 245 LEU CG CD1 sing N N 246 LEU CG CD2 sing N N 247 LEU CG HG sing N N 248 LEU CD1 HD11 sing N N 249 LEU CD1 HD12 sing N N 250 LEU CD1 HD13 sing N N 251 LEU CD2 HD21 sing N N 252 LEU CD2 HD22 sing N N 253 LEU CD2 HD23 sing N N 254 LEU OXT HXT sing N N 255 LYS N CA sing N N 256 LYS N H sing N N 257 LYS N H2 sing N N 258 LYS CA C sing N N 259 LYS CA CB sing N N 260 LYS CA HA sing N N 261 LYS C O doub N N 262 LYS C OXT sing N N 263 LYS CB CG sing N N 264 LYS CB HB2 sing N N 265 LYS CB HB3 sing N N 266 LYS CG CD sing N N 267 LYS CG HG2 sing N N 268 LYS CG HG3 sing N N 269 LYS CD CE sing N N 270 LYS CD HD2 sing N N 271 LYS CD HD3 sing N N 272 LYS CE NZ sing N N 273 LYS CE HE2 sing N N 274 LYS CE HE3 sing N N 275 LYS NZ HZ1 sing N N 276 LYS NZ HZ2 sing N N 277 LYS NZ HZ3 sing N N 278 LYS OXT HXT sing N N 279 MET N CA sing N N 280 MET N H sing N N 281 MET N H2 sing N N 282 MET CA C sing N N 283 MET CA CB sing N N 284 MET CA HA sing N N 285 MET C O doub N N 286 MET C OXT sing N N 287 MET CB CG sing N N 288 MET CB HB2 sing N N 289 MET CB HB3 sing N N 290 MET CG SD sing N N 291 MET CG HG2 sing N N 292 MET CG HG3 sing N N 293 MET SD CE sing N N 294 MET CE HE1 sing N N 295 MET CE HE2 sing N N 296 MET CE HE3 sing N N 297 MET OXT HXT sing N N 298 MK8 C CA sing N N 299 MK8 C OXT sing N N 300 MK8 N H sing N N 301 MK8 N H2 sing N N 302 MK8 O C doub N N 303 MK8 CA N sing N N 304 MK8 CA CB sing N N 305 MK8 CB HB sing N N 306 MK8 CB HBA sing N N 307 MK8 CD CG sing N N 308 MK8 CD HD sing N N 309 MK8 CD HDA sing N N 310 MK8 CE CD sing N N 311 MK8 CE HE sing N N 312 MK8 CE HEA sing N N 313 MK8 CE HEB sing N N 314 MK8 CG CB sing N N 315 MK8 CG HG sing N N 316 MK8 CG HGA sing N N 317 MK8 CB1 CA sing N N 318 MK8 CB1 HB1 sing N N 319 MK8 CB1 HB1A sing N N 320 MK8 CB1 HB1B sing N N 321 MK8 OXT HXT sing N N 322 PHE N CA sing N N 323 PHE N H sing N N 324 PHE N H2 sing N N 325 PHE CA C sing N N 326 PHE CA CB sing N N 327 PHE CA HA sing N N 328 PHE C O doub N N 329 PHE C OXT sing N N 330 PHE CB CG sing N N 331 PHE CB HB2 sing N N 332 PHE CB HB3 sing N N 333 PHE CG CD1 doub Y N 334 PHE CG CD2 sing Y N 335 PHE CD1 CE1 sing Y N 336 PHE CD1 HD1 sing N N 337 PHE CD2 CE2 doub Y N 338 PHE CD2 HD2 sing N N 339 PHE CE1 CZ doub Y N 340 PHE CE1 HE1 sing N N 341 PHE CE2 CZ sing Y N 342 PHE CE2 HE2 sing N N 343 PHE CZ HZ sing N N 344 PHE OXT HXT sing N N 345 PRO N CA sing N N 346 PRO N CD sing N N 347 PRO N H sing N N 348 PRO CA C sing N N 349 PRO CA CB sing N N 350 PRO CA HA sing N N 351 PRO C O doub N N 352 PRO C OXT sing N N 353 PRO CB CG sing N N 354 PRO CB HB2 sing N N 355 PRO CB HB3 sing N N 356 PRO CG CD sing N N 357 PRO CG HG2 sing N N 358 PRO CG HG3 sing N N 359 PRO CD HD2 sing N N 360 PRO CD HD3 sing N N 361 PRO OXT HXT sing N N 362 SER N CA sing N N 363 SER N H sing N N 364 SER N H2 sing N N 365 SER CA C sing N N 366 SER CA CB sing N N 367 SER CA HA sing N N 368 SER C O doub N N 369 SER C OXT sing N N 370 SER CB OG sing N N 371 SER CB HB2 sing N N 372 SER CB HB3 sing N N 373 SER OG HG sing N N 374 SER OXT HXT sing N N 375 THR N CA sing N N 376 THR N H sing N N 377 THR N H2 sing N N 378 THR CA C sing N N 379 THR CA CB sing N N 380 THR CA HA sing N N 381 THR C O doub N N 382 THR C OXT sing N N 383 THR CB OG1 sing N N 384 THR CB CG2 sing N N 385 THR CB HB sing N N 386 THR OG1 HG1 sing N N 387 THR CG2 HG21 sing N N 388 THR CG2 HG22 sing N N 389 THR CG2 HG23 sing N N 390 THR OXT HXT sing N N 391 TRP N CA sing N N 392 TRP N H sing N N 393 TRP N H2 sing N N 394 TRP CA C sing N N 395 TRP CA CB sing N N 396 TRP CA HA sing N N 397 TRP C O doub N N 398 TRP C OXT sing N N 399 TRP CB CG sing N N 400 TRP CB HB2 sing N N 401 TRP CB HB3 sing N N 402 TRP CG CD1 doub Y N 403 TRP CG CD2 sing Y N 404 TRP CD1 NE1 sing Y N 405 TRP CD1 HD1 sing N N 406 TRP CD2 CE2 doub Y N 407 TRP CD2 CE3 sing Y N 408 TRP NE1 CE2 sing Y N 409 TRP NE1 HE1 sing N N 410 TRP CE2 CZ2 sing Y N 411 TRP CE3 CZ3 doub Y N 412 TRP CE3 HE3 sing N N 413 TRP CZ2 CH2 doub Y N 414 TRP CZ2 HZ2 sing N N 415 TRP CZ3 CH2 sing Y N 416 TRP CZ3 HZ3 sing N N 417 TRP CH2 HH2 sing N N 418 TRP OXT HXT sing N N 419 TYR N CA sing N N 420 TYR N H sing N N 421 TYR N H2 sing N N 422 TYR CA C sing N N 423 TYR CA CB sing N N 424 TYR CA HA sing N N 425 TYR C O doub N N 426 TYR C OXT sing N N 427 TYR CB CG sing N N 428 TYR CB HB2 sing N N 429 TYR CB HB3 sing N N 430 TYR CG CD1 doub Y N 431 TYR CG CD2 sing Y N 432 TYR CD1 CE1 sing Y N 433 TYR CD1 HD1 sing N N 434 TYR CD2 CE2 doub Y N 435 TYR CD2 HD2 sing N N 436 TYR CE1 CZ doub Y N 437 TYR CE1 HE1 sing N N 438 TYR CE2 CZ sing Y N 439 TYR CE2 HE2 sing N N 440 TYR CZ OH sing N N 441 TYR OH HH sing N N 442 TYR OXT HXT sing N N 443 VAL N CA sing N N 444 VAL N H sing N N 445 VAL N H2 sing N N 446 VAL CA C sing N N 447 VAL CA CB sing N N 448 VAL CA HA sing N N 449 VAL C O doub N N 450 VAL C OXT sing N N 451 VAL CB CG1 sing N N 452 VAL CB CG2 sing N N 453 VAL CB HB sing N N 454 VAL CG1 HG11 sing N N 455 VAL CG1 HG12 sing N N 456 VAL CG1 HG13 sing N N 457 VAL CG2 HG21 sing N N 458 VAL CG2 HG22 sing N N 459 VAL CG2 HG23 sing N N 460 VAL OXT HXT sing N N 461 # _atom_sites.entry_id 4N5T _atom_sites.fract_transf_matrix[1][1] 0.012257 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009214 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032296 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_