HEADER TRANSFERASE 10-OCT-13 4N5V TITLE ALTERNATIVE SUBSTRATES OF MYCOBACTERIUM TUBERCULOSIS ANTHRANILATE TITLE 2 PHOSPHORIBOSYL TRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.2.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MT2248, MTCY190.03C, RV2192C, TRPD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, ANTHRANILIC ACIDS, MAGNESIUM, KEYWDS 2 TRYPTOPHAN, INHIBITOR, TRANSFERASE, MAGNESIUM BINDING PHOSPHORIBOSYL KEYWDS 3 PYROPHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR A.CASTELL,T.V.M.COOKSON,E.J.PARKER,E.N.BAKER,J.S.LOTT REVDAT 6 20-SEP-23 4N5V 1 HETSYN REVDAT 5 29-JUL-20 4N5V 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 17-DEC-14 4N5V 1 AUTHOR REVDAT 3 02-JUL-14 4N5V 1 JRNL REVDAT 2 21-MAY-14 4N5V 1 JRNL REVDAT 1 23-APR-14 4N5V 0 JRNL AUTH T.V.COOKSON,A.CASTELL,E.M.BULLOCH,G.L.EVANS,F.L.SHORT, JRNL AUTH 2 E.N.BAKER,J.S.LOTT,E.J.PARKER JRNL TITL ALTERNATIVE SUBSTRATES REVEAL CATALYTIC CYCLE AND KEY JRNL TITL 2 BINDING EVENTS IN THE REACTION CATALYSED BY ANTHRANILATE JRNL TITL 3 PHOSPHORIBOSYLTRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF BIOCHEM.J. V. 461 87 2014 JRNL REFN ISSN 0264-6021 JRNL PMID 24712732 JRNL DOI 10.1042/BJ20140209 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 67466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3607 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4914 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 258 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5027 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 513 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.12000 REMARK 3 B22 (A**2) : 1.96000 REMARK 3 B33 (A**2) : -0.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.026 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5312 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7265 ; 1.417 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 714 ; 5.604 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;32.443 ;22.358 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 752 ;13.049 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;19.550 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 842 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4090 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3474 ; 0.807 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5512 ; 1.475 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1838 ; 2.436 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1743 ; 3.929 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4N5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000082790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95365 REMARK 200 MONOCHROMATOR : SILICON DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROCESS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71154 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 121.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : 0.10800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 1.00900 REMARK 200 R SYM FOR SHELL (I) : 1.09300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3QR9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE/MALATE, 7.5% PEG4000, REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.79750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.53150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.27100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.53150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.79750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.27100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 PRO A 17 REMARK 465 LYS A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 ARG A 333 REMARK 465 LEU A 371 REMARK 465 ALA A 372 REMARK 465 HIS A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 ARG B 13 REMARK 465 GLY B 14 REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 PRO B 17 REMARK 465 LYS B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 ALA B 21 REMARK 465 ALA B 22 REMARK 465 ARG B 333 REMARK 465 HIS B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 73 98.00 101.44 REMARK 500 ASP A 251 49.57 -87.61 REMARK 500 THR A 257 -163.48 -169.23 REMARK 500 ALA B 73 101.64 91.21 REMARK 500 ASP B 251 44.68 -87.17 REMARK 500 THR B 257 -166.32 -172.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 119 OG REMARK 620 2 GLU A 252 OE2 91.1 REMARK 620 3 PRP A 401 O2B 88.0 84.2 REMARK 620 4 PRP A 401 O1A 81.7 154.9 71.6 REMARK 620 5 PRP A 401 O2A 95.6 171.8 91.3 23.8 REMARK 620 6 HOH A 504 O 80.0 80.3 160.1 121.6 105.6 REMARK 620 7 HOH A 507 O 176.8 85.8 92.5 101.4 87.5 98.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 251 OD1 REMARK 620 2 GLU A 252 OE2 91.4 REMARK 620 3 HOH A 507 O 88.0 73.7 REMARK 620 4 HOH A 572 O 151.0 72.4 109.3 REMARK 620 5 HOH A 734 O 128.2 131.3 80.1 78.9 REMARK 620 6 HOH A 740 O 86.0 114.2 170.2 79.3 97.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 119 OG REMARK 620 2 GLU B 252 OE2 95.4 REMARK 620 3 PRP B 401 O3B 89.2 86.7 REMARK 620 4 PRP B 401 O1A 91.4 173.2 93.3 REMARK 620 5 HOH B 503 O 79.0 83.2 163.7 98.2 REMARK 620 6 HOH B 508 O 175.9 87.1 94.1 86.1 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 251 OD1 REMARK 620 2 GLU B 252 OE2 94.2 REMARK 620 3 HOH B 508 O 83.5 75.1 REMARK 620 4 HOH B 536 O 158.9 69.9 104.6 REMARK 620 5 HOH B 681 O 90.6 134.0 150.8 91.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BPQ RELATED DB: PDB REMARK 900 RELATED ID: 3QR9 RELATED DB: PDB REMARK 900 RELATED ID: 4N8Q RELATED DB: PDB REMARK 900 RELATED ID: 4N93 RELATED DB: PDB DBREF 4N5V A 1 370 UNP P66992 TRPD_MYCTU 1 370 DBREF 4N5V B 1 370 UNP P66992 TRPD_MYCTU 1 370 SEQADV 4N5V LEU A 371 UNP P66992 EXPRESSION TAG SEQADV 4N5V ALA A 372 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 373 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 374 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 375 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 376 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 377 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS A 378 UNP P66992 EXPRESSION TAG SEQADV 4N5V LEU B 371 UNP P66992 EXPRESSION TAG SEQADV 4N5V ALA B 372 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 373 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 374 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 375 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 376 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 377 UNP P66992 EXPRESSION TAG SEQADV 4N5V HIS B 378 UNP P66992 EXPRESSION TAG SEQRES 1 A 378 MET ALA LEU SER ALA GLU GLY SER SER GLY GLY SER ARG SEQRES 2 A 378 GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SER SEQRES 3 A 378 TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG ASP SEQRES 4 A 378 LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN ILE SEQRES 5 A 378 MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA PHE SEQRES 6 A 378 ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP GLU SEQRES 7 A 378 VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA HIS SEQRES 8 A 378 PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL ASP SEQRES 9 A 378 VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL ASN SEQRES 10 A 378 LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA GLY SEQRES 11 A 378 VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SER SEQRES 12 A 378 LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY VAL SEQRES 13 A 378 ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER LEU SEQRES 14 A 378 ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG PHE SEQRES 15 A 378 HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG GLU SEQRES 16 A 378 ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO LEU SEQRES 17 A 378 THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY CYS SEQRES 18 A 378 ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL PHE SEQRES 19 A 378 ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY ASP SEQRES 20 A 378 ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER THR SEQRES 21 A 378 ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU THR SEQRES 22 A 378 PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN LEU SEQRES 23 A 378 ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA ALA SEQRES 24 A 378 ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO VAL SEQRES 25 A 378 ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE VAL SEQRES 26 A 378 ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU PRO SEQRES 27 A 378 ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA ILE SEQRES 28 A 378 ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP VAL SEQRES 29 A 378 ARG PHE GLY ARG GLN ILE LEU ALA HIS HIS HIS HIS HIS SEQRES 30 A 378 HIS SEQRES 1 B 378 MET ALA LEU SER ALA GLU GLY SER SER GLY GLY SER ARG SEQRES 2 B 378 GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SER SEQRES 3 B 378 TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG ASP SEQRES 4 B 378 LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN ILE SEQRES 5 B 378 MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA PHE SEQRES 6 B 378 ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP GLU SEQRES 7 B 378 VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA HIS SEQRES 8 B 378 PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL ASP SEQRES 9 B 378 VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL ASN SEQRES 10 B 378 LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA GLY SEQRES 11 B 378 VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SER SEQRES 12 B 378 LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY VAL SEQRES 13 B 378 ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER LEU SEQRES 14 B 378 ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG PHE SEQRES 15 B 378 HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG GLU SEQRES 16 B 378 ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO LEU SEQRES 17 B 378 THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY CYS SEQRES 18 B 378 ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL PHE SEQRES 19 B 378 ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY ASP SEQRES 20 B 378 ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER THR SEQRES 21 B 378 ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU THR SEQRES 22 B 378 PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN LEU SEQRES 23 B 378 ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA ALA SEQRES 24 B 378 ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO VAL SEQRES 25 B 378 ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE VAL SEQRES 26 B 378 ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU PRO SEQRES 27 B 378 ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA ILE SEQRES 28 B 378 ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP VAL SEQRES 29 B 378 ARG PHE GLY ARG GLN ILE LEU ALA HIS HIS HIS HIS HIS SEQRES 30 B 378 HIS HET PRP A 401 22 HET MG A 402 1 HET MG A 403 1 HET FA0 A 404 11 HET FA0 A 405 11 HET GOL A 406 6 HET GOL A 407 6 HET PRP B 401 22 HET MG B 402 1 HET MG B 403 1 HET FA0 B 404 11 HET FA0 B 405 11 HET GOL B 406 6 HETNAM PRP 1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE HETNAM MG MAGNESIUM ION HETNAM FA0 2-AMINO-4-FLUOROBENZOIC ACID HETNAM GOL GLYCEROL HETSYN PRP ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID; 1-O- HETSYN 2 PRP PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RIBOSE; 1-O- HETSYN 3 PRP PYROPHOSPHONO-5-O-PHOSPHONO-D-RIBOSE; 1-O- HETSYN 4 PRP PYROPHOSPHONO-5-O-PHOSPHONO-RIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PRP 2(C5 H13 O14 P3) FORMUL 4 MG 4(MG 2+) FORMUL 6 FA0 4(C7 H6 F N O2) FORMUL 8 GOL 3(C3 H8 O3) FORMUL 16 HOH *513(H2 O) HELIX 1 1 SER A 26 ASP A 36 1 11 HELIX 2 2 GLY A 43 THR A 54 1 12 HELIX 3 3 ARG A 58 ALA A 73 1 16 HELIX 4 4 THR A 75 HIS A 89 1 15 HELIX 5 5 ASN A 117 ALA A 129 1 13 HELIX 6 6 GLY A 146 LEU A 154 1 9 HELIX 7 7 GLY A 161 GLY A 173 1 13 HELIX 8 8 ALA A 179 HIS A 183 1 5 HELIX 9 9 TYR A 186 GLY A 197 1 12 HELIX 10 10 THR A 200 ASN A 203 5 4 HELIX 11 11 LEU A 204 THR A 209 1 6 HELIX 12 12 LEU A 226 ALA A 236 1 11 HELIX 13 13 ASP A 275 GLY A 280 5 6 HELIX 14 14 GLN A 285 ALA A 290 5 6 HELIX 15 15 ASP A 293 GLY A 306 1 14 HELIX 16 16 GLY A 310 GLY A 329 1 20 HELIX 17 17 GLU A 335 THR A 353 1 19 HELIX 18 18 GLY A 354 GLN A 369 1 16 HELIX 19 19 SER B 26 ASP B 36 1 11 HELIX 20 20 GLY B 43 THR B 54 1 12 HELIX 21 21 ARG B 58 ALA B 73 1 16 HELIX 22 22 THR B 75 ALA B 90 1 16 HELIX 23 23 ASN B 117 ALA B 129 1 13 HELIX 24 24 GLY B 146 LEU B 154 1 9 HELIX 25 25 GLY B 161 GLY B 173 1 13 HELIX 26 26 ALA B 179 HIS B 183 1 5 HELIX 27 27 TYR B 186 GLY B 197 1 12 HELIX 28 28 THR B 200 ASN B 203 5 4 HELIX 29 29 LEU B 204 THR B 209 1 6 HELIX 30 30 PHE B 223 ARG B 237 1 15 HELIX 31 31 ASP B 275 GLY B 280 5 6 HELIX 32 32 GLN B 285 ALA B 290 5 6 HELIX 33 33 ASP B 293 GLY B 306 1 14 HELIX 34 34 GLY B 310 GLY B 329 1 20 HELIX 35 35 LEU B 330 SER B 332 5 3 HELIX 36 36 GLU B 335 THR B 353 1 19 HELIX 37 37 GLY B 354 ILE B 370 1 17 SHEET 1 A 5 VAL A 103 GLY A 107 0 SHEET 2 A 5 ALA A 216 GLY A 220 1 O LEU A 218 N ASP A 104 SHEET 3 A 5 SER A 240 GLY A 246 1 O LEU A 242 N ILE A 219 SHEET 4 A 5 SER A 259 ALA A 265 -1 O TRP A 262 N VAL A 243 SHEET 5 A 5 SER A 268 PHE A 274 -1 O PHE A 274 N SER A 259 SHEET 1 B 2 VAL A 133 GLY A 137 0 SHEET 2 B 2 ILE A 174 PHE A 178 1 O CYS A 177 N LYS A 135 SHEET 1 C 5 VAL B 103 GLY B 107 0 SHEET 2 C 5 ALA B 216 GLY B 220 1 O LEU B 218 N VAL B 106 SHEET 3 C 5 SER B 240 GLY B 246 1 O VAL B 244 N ILE B 219 SHEET 4 C 5 SER B 259 ALA B 265 -1 O VAL B 264 N VAL B 241 SHEET 5 C 5 SER B 268 PHE B 274 -1 O PHE B 274 N SER B 259 SHEET 1 D 2 VAL B 133 GLY B 137 0 SHEET 2 D 2 ILE B 174 PHE B 178 1 O CYS B 177 N LYS B 135 LINK OG SER A 119 MG MG A 402 1555 1555 2.17 LINK OD1 ASP A 251 MG MG A 403 1555 1555 2.34 LINK OE2 GLU A 252 MG MG A 402 1555 1555 2.10 LINK OE2 GLU A 252 MG MG A 403 1555 1555 2.39 LINK O2B PRP A 401 MG MG A 402 1555 1555 2.05 LINK O1A PRP A 401 MG MG A 402 1555 1555 4.28 LINK O2A PRP A 401 MG MG A 402 1555 1555 2.06 LINK MG MG A 402 O HOH A 504 1555 1555 2.17 LINK MG MG A 402 O HOH A 507 1555 1555 2.07 LINK MG MG A 403 O HOH A 507 1555 1555 2.34 LINK MG MG A 403 O HOH A 572 1555 1555 2.41 LINK MG MG A 403 O HOH A 734 1555 1555 2.35 LINK MG MG A 403 O HOH A 740 1555 1555 2.43 LINK OG SER B 119 MG MG B 402 1555 1555 2.10 LINK OD1 ASP B 251 MG MG B 403 1555 1555 2.32 LINK OE2 GLU B 252 MG MG B 402 1555 1555 2.16 LINK OE2 GLU B 252 MG MG B 403 1555 1555 2.39 LINK O3B PRP B 401 MG MG B 402 1555 1555 2.01 LINK O1A PRP B 401 MG MG B 402 1555 1555 2.07 LINK MG MG B 402 O HOH B 503 1555 1555 2.07 LINK MG MG B 402 O HOH B 508 1555 1555 2.16 LINK MG MG B 403 O HOH B 508 1555 1555 2.49 LINK MG MG B 403 O HOH B 536 1555 1555 2.46 LINK MG MG B 403 O HOH B 681 1555 1555 2.43 CISPEP 1 SER B 23 VAL B 24 0 -14.50 CRYST1 79.595 92.542 121.063 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008260 0.00000