HEADER NUCLEAR PROTEIN/DNA 15-OCT-13 4N76 TITLE STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND TITLE 2 CLEAVED TARGET DNA WITH MN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGONAUTE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*T COMPND 7 P*AP*GP*T)-3'; COMPND 8 CHAIN: C, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'; COMPND 12 CHAIN: D, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 STRAIN: THERMOPHILUS; SOURCE 5 GENE: ARGONAUTE, TT_P0026; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES KEYWDS ARGONAUTE, RNA INTERFERENCE, DNA INTERFERENCE, PIWI, NUCLEAR PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.SHENG,H.ZHAO,J.WANG,Y.RAO,Y.WANG REVDAT 5 12-FEB-25 4N76 1 COMPND REMARK HET HETNAM REVDAT 5 2 1 FORMUL ATOM REVDAT 4 20-SEP-23 4N76 1 REMARK LINK REVDAT 3 15-NOV-17 4N76 1 REMARK REVDAT 2 29-JAN-14 4N76 1 JRNL REVDAT 1 15-JAN-14 4N76 0 JRNL AUTH G.SHENG,H.ZHAO,J.WANG,Y.RAO,W.TIAN,D.C.SWARTS, JRNL AUTH 2 J.VAN DER OOST,D.J.PATEL,Y.WANG JRNL TITL STRUCTURE-BASED CLEAVAGE MECHANISM OF THERMUS THERMOPHILUS JRNL TITL 2 ARGONAUTE DNA GUIDE STRAND-MEDIATED DNA TARGET CLEAVAGE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 652 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24374628 JRNL DOI 10.1073/PNAS.1321032111 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 45258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3791 - 7.2752 0.99 2988 163 0.2381 0.2712 REMARK 3 2 7.2752 - 5.7774 0.99 2855 157 0.2393 0.2820 REMARK 3 3 5.7774 - 5.0480 0.99 2841 132 0.1992 0.2581 REMARK 3 4 5.0480 - 4.5868 0.99 2816 151 0.1660 0.2168 REMARK 3 5 4.5868 - 4.2582 0.99 2780 154 0.1603 0.1876 REMARK 3 6 4.2582 - 4.0073 0.98 2803 135 0.1649 0.2217 REMARK 3 7 4.0073 - 3.8067 0.98 2747 143 0.1778 0.2413 REMARK 3 8 3.8067 - 3.6410 0.98 2793 138 0.2048 0.2472 REMARK 3 9 3.6410 - 3.5009 0.97 2684 164 0.2014 0.2670 REMARK 3 10 3.5009 - 3.3801 0.96 2701 156 0.2186 0.2733 REMARK 3 11 3.3801 - 3.2744 0.96 2667 146 0.2426 0.3068 REMARK 3 12 3.2744 - 3.1809 0.96 2672 144 0.2591 0.3095 REMARK 3 13 3.1809 - 3.0971 0.94 2607 131 0.2771 0.3366 REMARK 3 14 3.0971 - 3.0216 0.92 2590 132 0.3168 0.3715 REMARK 3 15 3.0216 - 2.9529 0.89 2469 139 0.3379 0.3720 REMARK 3 16 2.9529 - 2.8900 0.70 1952 108 0.3443 0.3980 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 11167 REMARK 3 ANGLE : 1.107 15361 REMARK 3 CHIRALITY : 0.056 1708 REMARK 3 PLANARITY : 0.004 1854 REMARK 3 DIHEDRAL : 16.971 4106 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 11:21 OR RESSEQ REMARK 3 316:354 OR RESSEQ 388:436 OR RESSEQ 485: REMARK 3 512 OR RESSEQ 534:608 OR RESSEQ 612:660 REMARK 3 OR RESSEQ 662:685 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 11:21 OR RESSEQ REMARK 3 316:354 OR RESSEQ 388:436 OR RESSEQ 485: REMARK 3 512 OR RESSEQ 534:608 OR RESSEQ 612:660 REMARK 3 OR RESSEQ 662:685 ) REMARK 3 ATOM PAIRS NUMBER : 2116 REMARK 3 RMSD : 0.015 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C AND (RESSEQ 1:10 ) REMARK 3 SELECTION : CHAIN E AND (RESSEQ 1:10 ) REMARK 3 ATOM PAIRS NUMBER : 211 REMARK 3 RMSD : 0.011 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN D AND (RESSEQ 11:19 ) REMARK 3 SELECTION : CHAIN F AND (RESSEQ 11:19 ) REMARK 3 ATOM PAIRS NUMBER : 180 REMARK 3 RMSD : 0.145 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000082837. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45264 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.890 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4N47 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8 M SODIUM ACETATE, 0.1 M BIS-TRIS REMARK 280 PROPANE, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 306K, REMARK 280 PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.45900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.22850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.71000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.22850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.45900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.71000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 TYR A 197 REMARK 465 ASP A 198 REMARK 465 ARG A 199 REMARK 465 ARG A 200 REMARK 465 THR A 201 REMARK 465 TRP A 202 REMARK 465 GLU A 203 REMARK 465 LEU A 204 REMARK 465 LEU A 205 REMARK 465 ARG A 206 REMARK 465 LEU A 207 REMARK 465 GLY A 208 REMARK 465 GLU A 209 REMARK 465 GLU A 210 REMARK 465 ASP A 211 REMARK 465 PRO A 212 REMARK 465 LYS A 213 REMARK 465 GLU A 214 REMARK 465 LEU A 215 REMARK 465 PRO A 216 REMARK 465 ARG A 240 REMARK 465 VAL A 241 REMARK 465 ALA A 242 REMARK 465 TRP A 243 REMARK 465 VAL A 244 REMARK 465 ALA A 245 REMARK 465 ASP A 246 REMARK 465 PRO A 247 REMARK 465 LYS A 248 REMARK 465 ASP A 249 REMARK 465 PRO A 250 REMARK 465 ARG A 251 REMARK 465 LYS A 252 REMARK 465 PRO A 253 REMARK 465 ILE A 254 REMARK 465 PRO A 255 REMARK 465 LEU A 270 REMARK 465 HIS A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLU A 274 REMARK 465 GLY A 275 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLU B 40 REMARK 465 GLU B 41 REMARK 465 MET B 82 REMARK 465 GLY B 83 REMARK 465 GLY B 208 REMARK 465 GLU B 209 REMARK 465 ASP B 246 REMARK 465 PRO B 247 REMARK 465 LYS B 248 REMARK 465 ASP B 249 REMARK 465 PRO B 250 REMARK 465 HIS B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLU B 274 REMARK 465 GLY B 275 REMARK 465 DG C 11 REMARK 465 DG C 12 REMARK 465 DT C 13 REMARK 465 DT C 14 REMARK 465 DG C 15 REMARK 465 DT C 16 REMARK 465 DA C 17 REMARK 465 DT C 18 REMARK 465 DA C 19 REMARK 465 DG C 20 REMARK 465 DT C 21 REMARK 465 DG E 12 REMARK 465 DT E 13 REMARK 465 DT E 14 REMARK 465 DG E 15 REMARK 465 DT E 16 REMARK 465 DA E 17 REMARK 465 DT E 18 REMARK 465 DA E 19 REMARK 465 DG E 20 REMARK 465 DT E 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 3 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 MET A 82 CG SD CE REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 ARG A 96 CG CD NE CZ NH1 NH2 REMARK 470 SER A 107 OG REMARK 470 VAL A 127 CG1 CG2 REMARK 470 ARG A 136 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 141 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 143 CG CD REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 MET A 177 CG SD CE REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 TRP A 182 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 182 CZ3 CH2 REMARK 470 LEU A 183 CG CD1 CD2 REMARK 470 GLN A 185 CG CD OE1 NE2 REMARK 470 HIS A 187 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 189 CG CD1 CD2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 ARG A 192 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 193 CG1 CG2 REMARK 470 ARG A 194 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 195 CG OD1 ND2 REMARK 470 LEU A 217 CG CD1 CD2 REMARK 470 PRO A 218 CG CD REMARK 470 LEU A 223 CG CD1 CD2 REMARK 470 ASP A 225 CG OD1 OD2 REMARK 470 TYR A 226 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 227 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 229 OG REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 ARG A 232 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 233 CG CD1 CD2 REMARK 470 GLN A 234 CG CD OE1 NE2 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 HIS A 256 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 257 CG CD1 CD2 REMARK 470 THR A 258 OG1 CG2 REMARK 470 LEU A 260 CG CD1 CD2 REMARK 470 LEU A 261 CG CD1 CD2 REMARK 470 LEU A 265 CG CD1 CD2 REMARK 470 THR A 266 OG1 CG2 REMARK 470 LEU A 267 CG CD1 CD2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 ASP A 269 CG OD1 OD2 REMARK 470 SER A 276 OG REMARK 470 LEU A 277 CG CD1 CD2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 482 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 483 CG CD OE1 OE2 REMARK 470 SER A 484 OG REMARK 470 ARG A 587 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 597 CG CD OE1 OE2 REMARK 470 ASP A 598 CG OD1 OD2 REMARK 470 ARG A 611 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 25 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 ARG B 39 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 45 CG CD1 CD2 REMARK 470 GLN B 84 CG CD OE1 NE2 REMARK 470 TYR B 86 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 107 OG REMARK 470 VAL B 127 CG1 CG2 REMARK 470 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 141 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 143 CG CD REMARK 470 GLU B 176 CG CD OE1 OE2 REMARK 470 LEU B 183 CG CD1 CD2 REMARK 470 LEU B 189 CG CD1 CD2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 LEU B 205 CG CD1 CD2 REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 LYS B 213 CG CD CE NZ REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 LEU B 215 CG CD1 CD2 REMARK 470 PRO B 218 CG CD REMARK 470 SER B 229 OG REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 241 CG1 CG2 REMARK 470 ARG B 251 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 252 CG CD CE NZ REMARK 470 LEU B 267 CG CD1 CD2 REMARK 470 LEU B 270 CG CD1 CD2 REMARK 470 SER B 276 OG REMARK 470 LEU B 277 CG CD1 CD2 REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 ARG B 440 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 482 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 483 CG CD OE1 OE2 REMARK 470 GLN B 585 CG CD OE1 NE2 REMARK 470 ARG B 587 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 597 CG CD OE1 OE2 REMARK 470 ASP B 598 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 585 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASP B 99 OE1 GLU B 105 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 1 P DT C 1 OP3 -0.132 REMARK 500 DT E 1 P DT E 1 OP3 -0.129 REMARK 500 DT D 10 P DT D 10 OP3 -0.123 REMARK 500 DT F 10 P DT F 10 OP3 -0.124 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 438 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 DT C 1 OP1 - P - OP2 ANGL. DEV. = -11.0 DEGREES REMARK 500 DG C 5 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT C 9 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT E 1 OP1 - P - OP2 ANGL. DEV. = -12.3 DEGREES REMARK 500 DG E 2 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG E 4 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG E 5 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT E 6 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT E 9 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA E 10 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC D 12 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT D 13 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC F 12 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT F 13 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC F 15 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 4 -119.83 -91.86 REMARK 500 THR A 7 -148.77 -115.42 REMARK 500 ASN A 12 31.66 -77.32 REMARK 500 LEU A 16 -158.90 -104.20 REMARK 500 PRO A 37 -158.90 -69.45 REMARK 500 GLU A 41 73.24 -107.73 REMARK 500 VAL A 42 -63.19 -131.95 REMARK 500 GLN A 84 129.34 -170.13 REMARK 500 LYS A 93 54.37 -113.13 REMARK 500 ARG A 141 -144.73 -118.55 REMARK 500 PRO A 143 55.36 -92.91 REMARK 500 PRO A 218 34.58 -91.39 REMARK 500 LEU A 221 106.30 -51.03 REMARK 500 THR A 266 -116.05 -125.30 REMARK 500 GLU A 268 -80.20 -65.13 REMARK 500 GLN A 342 -166.75 -108.27 REMARK 500 ALA A 354 -156.37 -154.39 REMARK 500 GLN A 355 -140.61 -94.41 REMARK 500 PRO A 438 82.74 -65.62 REMARK 500 ARG A 482 174.30 -58.04 REMARK 500 GLU A 483 -145.90 154.84 REMARK 500 HIS A 500 103.29 -175.57 REMARK 500 LEU A 596 -116.18 -89.50 REMARK 500 GLU A 597 -171.95 -69.13 REMARK 500 LYS A 599 -4.69 67.90 REMARK 500 ASN B 12 32.35 -78.12 REMARK 500 LEU B 16 -157.94 -103.80 REMARK 500 PRO B 37 -122.86 -77.28 REMARK 500 GLU B 130 79.96 -107.10 REMARK 500 SER B 158 -163.33 -74.36 REMARK 500 SER B 160 4.69 -69.62 REMARK 500 PRO B 188 -171.51 -69.77 REMARK 500 ASP B 198 -144.78 -155.84 REMARK 500 LEU B 205 -65.74 -97.53 REMARK 500 ARG B 206 -135.76 -131.25 REMARK 500 PRO B 218 91.49 -63.40 REMARK 500 VAL B 241 78.65 -115.93 REMARK 500 THR B 266 -169.82 -112.79 REMARK 500 GLN B 342 -166.91 -108.20 REMARK 500 ALA B 354 -158.83 -153.55 REMARK 500 GLU B 443 59.63 -99.14 REMARK 500 ARG B 482 72.39 -61.53 REMARK 500 GLU B 483 -124.36 -80.52 REMARK 500 HIS B 500 100.06 -164.36 REMARK 500 LEU B 596 -116.36 -90.54 REMARK 500 GLU B 597 -171.80 -69.13 REMARK 500 LYS B 599 -4.89 67.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL B 437 PRO B 438 137.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 685 OXT REMARK 620 2 VAL A 685 O 52.4 REMARK 620 3 DT C 1 OP3 143.0 94.8 REMARK 620 4 DA C 3 OP1 100.6 146.1 101.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 478 OD2 REMARK 620 2 ASP B 546 OD2 84.7 REMARK 620 3 DT F 10 OP1 147.4 76.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 703 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 478 OD1 REMARK 620 2 ASP B 660 OD2 77.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 701 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 685 OXT REMARK 620 2 VAL B 685 O 53.5 REMARK 620 3 DT E 1 OP3 138.7 97.1 REMARK 620 4 DA E 3 OP1 91.9 135.4 93.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMP B 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N41 RELATED DB: PDB REMARK 900 RELATED ID: 4N47 RELATED DB: PDB REMARK 900 RELATED ID: 4NCA RELATED DB: PDB REMARK 900 RELATED ID: 4NCB RELATED DB: PDB DBREF 4N76 A 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 4N76 B 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 4N76 D 10 19 PDB 4N76 4N76 10 19 DBREF 4N76 F 10 19 PDB 4N76 4N76 10 19 DBREF 4N76 C 1 21 PDB 4N76 4N76 1 21 DBREF 4N76 E 1 21 PDB 4N76 4N76 1 21 SEQRES 1 A 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 A 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 A 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 A 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 A 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 A 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 A 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 A 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 A 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 A 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 A 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 A 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 A 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 A 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 A 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 A 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 A 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 A 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 A 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 A 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 A 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 A 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 A 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 A 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 A 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 A 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 A 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 A 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 A 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 A 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 A 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 A 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 A 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 A 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 A 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 A 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 A 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 A 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 A 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 A 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 A 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 A 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 A 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 A 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 A 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 A 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 A 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 A 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 A 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 A 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 A 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 A 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 A 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 B 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 B 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 B 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 B 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 B 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 B 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 B 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 B 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 B 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 B 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 B 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 B 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 B 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 B 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 B 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 B 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 B 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 B 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 B 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 B 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 B 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 B 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 B 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 B 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 B 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 B 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 B 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 B 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 B 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 B 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 B 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 B 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 B 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 B 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 B 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 B 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 B 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 B 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 B 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 B 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 B 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 B 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 B 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 B 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 B 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 B 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 B 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 B 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 B 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 B 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 B 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 B 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 B 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 C 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 C 21 DT DG DT DA DT DA DG DT SEQRES 1 E 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 E 21 DT DG DT DA DT DA DG DT SEQRES 1 D 10 DT DA DC DT DA DC DC DT DC DG SEQRES 1 F 10 DT DA DC DT DA DC DC DT DC DG HET MN B 701 1 HET MN B 702 1 HET MN B 703 1 HET TMP B 704 21 HET MN C 101 1 HETNAM MN MANGANESE (II) ION HETNAM TMP THYMIDINE-5'-PHOSPHATE FORMUL 7 MN 4(MN 2+) FORMUL 10 TMP C10 H15 N2 O8 P FORMUL 12 HOH *27(H2 O) HELIX 1 1 GLY A 38 GLU A 41 5 4 HELIX 2 2 VAL A 42 ALA A 53 1 12 HELIX 3 3 PRO A 69 LEU A 73 5 5 HELIX 4 4 ASP A 102 ARG A 123 1 22 HELIX 5 5 SER A 178 ALA A 184 1 7 HELIX 6 6 SER A 222 SER A 229 1 8 HELIX 7 7 PRO A 282 LEU A 301 1 20 HELIX 8 8 LYS A 329 ALA A 331 5 3 HELIX 9 9 ASP A 332 GLY A 337 1 6 HELIX 10 10 PRO A 358 GLY A 373 1 16 HELIX 11 11 HIS A 384 GLN A 387 5 4 HELIX 12 12 GLY A 388 GLU A 401 1 14 HELIX 13 13 ALA A 414 ARG A 427 1 14 HELIX 14 14 GLU A 443 ALA A 458 1 16 HELIX 15 15 PRO A 515 GLY A 535 1 21 HELIX 16 16 PHE A 554 GLY A 565 1 12 HELIX 17 17 ARG A 608 GLY A 612 5 5 HELIX 18 18 PRO A 627 THR A 639 1 13 HELIX 19 19 PRO A 653 GLY A 670 1 18 HELIX 20 20 ILE A 671 VAL A 677 5 7 HELIX 21 21 TYR B 43 ALA B 53 1 11 HELIX 22 22 PRO B 69 LEU B 73 5 5 HELIX 23 23 ASP B 102 ARG B 123 1 22 HELIX 24 24 SER B 178 ALA B 184 1 7 HELIX 25 25 ASP B 211 LEU B 215 5 5 HELIX 26 26 SER B 222 LYS B 230 1 9 HELIX 27 27 THR B 266 LEU B 270 5 5 HELIX 28 28 PRO B 282 LEU B 301 1 20 HELIX 29 29 LYS B 329 ALA B 331 5 3 HELIX 30 30 ASP B 332 GLY B 337 1 6 HELIX 31 31 PRO B 358 GLY B 373 1 16 HELIX 32 32 HIS B 384 GLN B 387 5 4 HELIX 33 33 GLY B 388 GLU B 401 1 14 HELIX 34 34 ALA B 414 ARG B 427 1 14 HELIX 35 35 GLU B 443 GLY B 459 1 17 HELIX 36 36 PRO B 515 GLY B 535 1 21 HELIX 37 37 PHE B 554 GLY B 565 1 12 HELIX 38 38 PRO B 627 THR B 639 1 13 HELIX 39 39 PRO B 653 GLY B 670 1 18 HELIX 40 40 ILE B 671 VAL B 677 5 7 SHEET 1 A14 TRP A 128 GLU A 130 0 SHEET 2 A14 ALA A 133 ALA A 140 -1 O TYR A 135 N TRP A 128 SHEET 3 A14 TRP A 145 VAL A 157 -1 O VAL A 147 N ALA A 140 SHEET 4 A14 ALA A 162 CYS A 175 -1 O LEU A 164 N TRP A 156 SHEET 5 A14 LYS A 6 PRO A 18 -1 N LEU A 16 O PHE A 163 SHEET 6 A14 GLU A 307 ARG A 315 -1 O ALA A 311 N VAL A 9 SHEET 7 A14 LEU A 592 PRO A 595 -1 O TYR A 593 N TYR A 314 SHEET 8 A14 THR A 600 LEU A 604 -1 O LEU A 602 N VAL A 594 SHEET 9 A14 LEU A 617 GLY A 624 -1 O LEU A 619 N PHE A 601 SHEET 10 A14 ALA A 567 ARG A 574 -1 N LEU A 570 O ALA A 623 SHEET 11 A14 ARG A 540 ASP A 546 1 N LEU A 543 O ASP A 569 SHEET 12 A14 LEU A 473 GLY A 480 1 N VAL A 475 O LEU A 544 SHEET 13 A14 ARG A 486 VAL A 494 -1 O GLY A 489 N ASP A 478 SHEET 14 A14 GLU A 507 GLN A 509 -1 O GLU A 507 N GLY A 488 SHEET 1 B11 LEU A 501 TRP A 503 0 SHEET 2 B11 ARG A 486 VAL A 494 -1 N CYS A 492 O LEU A 502 SHEET 3 B11 LEU A 473 GLY A 480 -1 N ASP A 478 O GLY A 489 SHEET 4 B11 ARG A 540 ASP A 546 1 O LEU A 544 N VAL A 475 SHEET 5 B11 ALA A 567 ARG A 574 1 O ASP A 569 N LEU A 543 SHEET 6 B11 LEU A 617 GLY A 624 -1 O ALA A 623 N LEU A 570 SHEET 7 B11 THR A 600 LEU A 604 -1 N PHE A 601 O LEU A 619 SHEET 8 B11 LEU A 592 PRO A 595 -1 N VAL A 594 O LEU A 602 SHEET 9 B11 GLU A 307 ARG A 315 -1 N TYR A 314 O TYR A 593 SHEET 10 B11 LYS A 6 PRO A 18 -1 N VAL A 9 O ALA A 311 SHEET 11 B11 VAL A 581 PRO A 583 -1 O TYR A 582 N PHE A 10 SHEET 1 C 5 THR A 57 MET A 60 0 SHEET 2 C 5 GLY A 63 SER A 66 -1 O ALA A 65 N VAL A 58 SHEET 3 C 5 TRP A 27 VAL A 32 -1 N TRP A 27 O SER A 66 SHEET 4 C 5 THR A 85 ARG A 95 -1 O GLY A 94 N ARG A 28 SHEET 5 C 5 GLU A 76 ALA A 80 -1 N LEU A 79 O TYR A 86 SHEET 1 D 2 VAL A 193 ARG A 194 0 SHEET 2 D 2 VAL A 262 PRO A 263 -1 O VAL A 262 N ARG A 194 SHEET 1 E 2 LEU A 321 MET A 322 0 SHEET 2 E 2 ALA A 464 LEU A 465 -1 O ALA A 464 N MET A 322 SHEET 1 F 4 LEU A 376 THR A 380 0 SHEET 2 F 4 THR A 344 ARG A 350 1 N LEU A 346 O HIS A 379 SHEET 3 F 4 VAL A 403 THR A 410 1 O GLN A 404 N ALA A 345 SHEET 4 F 4 SER A 432 ASN A 436 1 O LEU A 435 N VAL A 408 SHEET 1 G14 TRP B 128 VAL B 129 0 SHEET 2 G14 ALA B 133 ARG B 141 -1 O TYR B 135 N TRP B 128 SHEET 3 G14 TRP B 145 VAL B 157 -1 O ALA B 151 N VAL B 134 SHEET 4 G14 ALA B 162 CYS B 175 -1 O LEU B 164 N TRP B 156 SHEET 5 G14 LYS B 6 PRO B 18 -1 N LEU B 16 O PHE B 163 SHEET 6 G14 GLU B 307 ARG B 315 -1 O GLU B 307 N ALA B 15 SHEET 7 G14 LEU B 592 PRO B 595 -1 O TYR B 593 N TYR B 314 SHEET 8 G14 THR B 600 LEU B 604 -1 O LEU B 602 N VAL B 594 SHEET 9 G14 LEU B 617 GLY B 624 -1 O LEU B 619 N PHE B 601 SHEET 10 G14 ALA B 567 ARG B 574 -1 N LEU B 570 O ALA B 623 SHEET 11 G14 ARG B 540 ASP B 546 1 N LEU B 543 O ASP B 569 SHEET 12 G14 LEU B 473 GLY B 480 1 N VAL B 475 O LEU B 544 SHEET 13 G14 ARG B 486 VAL B 494 -1 O ALA B 491 N GLY B 476 SHEET 14 G14 GLU B 507 GLN B 509 -1 O GLN B 509 N ARG B 486 SHEET 1 H11 LEU B 501 TRP B 503 0 SHEET 2 H11 ARG B 486 VAL B 494 -1 N CYS B 492 O LEU B 502 SHEET 3 H11 LEU B 473 GLY B 480 -1 N GLY B 476 O ALA B 491 SHEET 4 H11 ARG B 540 ASP B 546 1 O LEU B 544 N VAL B 475 SHEET 5 H11 ALA B 567 ARG B 574 1 O ASP B 569 N LEU B 543 SHEET 6 H11 LEU B 617 GLY B 624 -1 O ALA B 623 N LEU B 570 SHEET 7 H11 THR B 600 LEU B 604 -1 N PHE B 601 O LEU B 619 SHEET 8 H11 LEU B 592 PRO B 595 -1 N VAL B 594 O LEU B 602 SHEET 9 H11 GLU B 307 ARG B 315 -1 N TYR B 314 O TYR B 593 SHEET 10 H11 LYS B 6 PRO B 18 -1 N ALA B 15 O GLU B 307 SHEET 11 H11 VAL B 581 PRO B 583 -1 O TYR B 582 N PHE B 10 SHEET 1 I 5 THR B 57 MET B 60 0 SHEET 2 I 5 GLY B 63 SER B 66 -1 O ALA B 65 N VAL B 58 SHEET 3 I 5 TRP B 27 ASP B 34 -1 N TRP B 27 O SER B 66 SHEET 4 I 5 TYR B 86 ARG B 95 -1 O LYS B 93 N ARG B 28 SHEET 5 I 5 GLU B 76 LEU B 79 -1 N LEU B 79 O TYR B 86 SHEET 1 J 3 THR B 201 GLU B 203 0 SHEET 2 J 3 ARG B 192 ASN B 195 -1 N VAL B 193 O TRP B 202 SHEET 3 J 3 LEU B 261 PRO B 263 -1 O VAL B 262 N ARG B 194 SHEET 1 K 2 VAL B 241 VAL B 244 0 SHEET 2 K 2 ILE B 254 LEU B 257 -1 O ILE B 254 N VAL B 244 SHEET 1 L 2 LEU B 321 MET B 322 0 SHEET 2 L 2 ALA B 464 LEU B 465 -1 O ALA B 464 N MET B 322 SHEET 1 M 4 LEU B 376 THR B 380 0 SHEET 2 M 4 THR B 344 ARG B 350 1 N THR B 344 O ARG B 377 SHEET 3 M 4 ALA B 405 THR B 410 1 O LEU B 407 N LEU B 349 SHEET 4 M 4 SER B 432 ASN B 436 1 O LEU B 435 N VAL B 408 LINK OXT VAL A 685 MN MN C 101 1555 1555 2.17 LINK O VAL A 685 MN MN C 101 1555 1555 2.53 LINK OD2 ASP B 478 MN MN B 702 1555 1555 2.14 LINK OD1 ASP B 478 MN MN B 703 1555 1555 2.19 LINK OD2 ASP B 546 MN MN B 702 1555 1555 2.16 LINK OD2 ASP B 660 MN MN B 703 1555 1555 2.14 LINK OXT VAL B 685 MN MN B 701 1555 1555 2.23 LINK O VAL B 685 MN MN B 701 1555 1555 2.44 LINK MN MN B 701 OP3 DT E 1 1555 1555 2.03 LINK MN MN B 701 OP1 DA E 3 1555 1555 2.08 LINK MN MN B 702 OP1 DT F 10 1555 1555 2.17 LINK OP3 DT C 1 MN MN C 101 1555 1555 1.96 LINK OP1 DA C 3 MN MN C 101 1555 1555 1.82 CISPEP 1 ASP A 34 PRO A 35 0 5.74 CISPEP 2 GLU A 125 GLY A 126 0 -4.92 CISPEP 3 ASP B 34 PRO B 35 0 6.78 CISPEP 4 GLU B 125 GLY B 126 0 1.95 SITE 1 AC1 5 GLN B 433 LYS B 457 VAL B 685 DT E 1 SITE 2 AC1 5 DA E 3 SITE 1 AC2 6 ASP B 478 ALA B 479 GLU B 512 ASP B 546 SITE 2 AC2 6 MN B 703 DT F 10 SITE 1 AC3 4 ASP B 478 ASP B 660 MN B 702 DT F 10 SITE 1 AC4 11 PRO A 37 ARG A 39 VAL A 42 ASN B 195 SITE 2 AC4 11 TYR B 197 PRO B 218 TYR B 226 HIS B 227 SITE 3 AC4 11 ARG B 232 PRO B 255 HIS B 256 SITE 1 AC5 5 LYS A 457 VAL A 685 DT C 1 DA C 3 SITE 2 AC5 5 HOH C 201 CRYST1 110.918 117.420 160.457 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009016 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008516 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006232 0.00000