HEADER TRANSPORT PROTEIN 18-OCT-13 4N91 TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 ANAEROCOCCUS PREVOTII DSM 20548 (APRE_1383), TARGET EFI-510023, WITH TITLE 3 BOUND ALPHA/BETA D-GLUCURONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAEROCOCCUS PREVOTI; SOURCE 3 ORGANISM_COMMON: PEPTOSTREPTOCOCCUS PREVOTII; SOURCE 4 ORGANISM_TAXID: 525919; SOURCE 5 STRAIN: DSM 20548; SOURCE 6 GENE: APRE_1383; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN,S.SOJITRA, AUTHOR 2 M.STEAD,J.D.ATTONITO,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,B.HILLERICH, AUTHOR 3 J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 3 29-JUL-20 4N91 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 25-FEB-15 4N91 1 JRNL REVDAT 1 13-NOV-13 4N91 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 47519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2345 - 4.3662 0.99 2830 143 0.1592 0.1758 REMARK 3 2 4.3662 - 3.4676 0.99 2719 142 0.1346 0.1663 REMARK 3 3 3.4676 - 3.0299 0.99 2743 149 0.1572 0.1614 REMARK 3 4 3.0299 - 2.7531 0.99 2667 143 0.1550 0.1579 REMARK 3 5 2.7531 - 2.5559 0.99 2668 161 0.1389 0.1582 REMARK 3 6 2.5559 - 2.4053 0.98 2681 115 0.1299 0.1765 REMARK 3 7 2.4053 - 2.2849 0.98 2646 152 0.1227 0.1441 REMARK 3 8 2.2849 - 2.1855 0.98 2646 146 0.1406 0.1785 REMARK 3 9 2.1855 - 2.1014 0.98 2614 141 0.1272 0.1703 REMARK 3 10 2.1014 - 2.0289 0.98 2651 143 0.1357 0.1637 REMARK 3 11 2.0289 - 1.9655 0.97 2635 132 0.1417 0.1737 REMARK 3 12 1.9655 - 1.9093 0.97 2612 160 0.1730 0.2141 REMARK 3 13 1.9093 - 1.8590 0.97 2616 123 0.1582 0.2114 REMARK 3 14 1.8590 - 1.8137 0.97 2600 155 0.1530 0.1765 REMARK 3 15 1.8137 - 1.7725 0.97 2598 145 0.1593 0.1970 REMARK 3 16 1.7725 - 1.7348 0.96 2586 128 0.1715 0.1859 REMARK 3 17 1.7348 - 1.7001 0.97 2600 129 0.1804 0.2225 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2574 REMARK 3 ANGLE : 1.264 3493 REMARK 3 CHIRALITY : 0.327 376 REMARK 3 PLANARITY : 0.006 458 REMARK 3 DIHEDRAL : 13.461 967 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2534 35.4299 22.0197 REMARK 3 T TENSOR REMARK 3 T11: 0.1303 T22: 0.1590 REMARK 3 T33: 0.2032 T12: 0.0023 REMARK 3 T13: -0.0392 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 0.0770 L22: 0.0446 REMARK 3 L33: 0.0636 L12: -0.0136 REMARK 3 L13: 0.0059 L23: 0.0231 REMARK 3 S TENSOR REMARK 3 S11: -0.0007 S12: 0.0433 S13: -0.1793 REMARK 3 S21: 0.1363 S22: 0.0584 S23: 0.0331 REMARK 3 S31: 0.1206 S32: -0.0931 S33: -0.0014 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4698 44.3971 18.4267 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.1739 REMARK 3 T33: 0.1324 T12: 0.0791 REMARK 3 T13: -0.0172 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0.4832 L22: 0.3116 REMARK 3 L33: 0.5146 L12: -0.1937 REMARK 3 L13: -0.2062 L23: 0.1956 REMARK 3 S TENSOR REMARK 3 S11: 0.1599 S12: 0.1656 S13: -0.1753 REMARK 3 S21: -0.0010 S22: -0.0404 S23: -0.0725 REMARK 3 S31: -0.0062 S32: -0.0505 S33: 0.1962 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2174 43.6245 8.4366 REMARK 3 T TENSOR REMARK 3 T11: 0.1417 T22: 0.2442 REMARK 3 T33: 0.1319 T12: 0.0797 REMARK 3 T13: -0.0081 T23: -0.0641 REMARK 3 L TENSOR REMARK 3 L11: 0.0041 L22: 0.0522 REMARK 3 L33: 0.0355 L12: 0.0088 REMARK 3 L13: -0.0083 L23: -0.0396 REMARK 3 S TENSOR REMARK 3 S11: 0.0740 S12: 0.2438 S13: -0.1882 REMARK 3 S21: -0.1946 S22: -0.0275 S23: -0.0311 REMARK 3 S31: 0.1843 S32: -0.0675 S33: 0.0173 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1831 62.2420 28.0121 REMARK 3 T TENSOR REMARK 3 T11: 0.1351 T22: 0.1304 REMARK 3 T33: 0.1597 T12: 0.0334 REMARK 3 T13: 0.0252 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.2083 L22: 0.1308 REMARK 3 L33: 0.1264 L12: -0.1499 REMARK 3 L13: -0.0860 L23: -0.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.0937 S12: 0.0661 S13: 0.0793 REMARK 3 S21: -0.0037 S22: -0.0171 S23: -0.0815 REMARK 3 S31: -0.1060 S32: 0.0379 S33: 0.0321 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5852 52.5959 27.0739 REMARK 3 T TENSOR REMARK 3 T11: 0.1128 T22: 0.1256 REMARK 3 T33: 0.1153 T12: 0.0491 REMARK 3 T13: 0.0000 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.4227 L22: 0.2846 REMARK 3 L33: 0.1841 L12: -0.1253 REMARK 3 L13: -0.0917 L23: 0.1131 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: 0.0996 S13: -0.0205 REMARK 3 S21: -0.0183 S22: -0.0358 S23: 0.0410 REMARK 3 S31: -0.0484 S32: -0.0647 S33: 0.0241 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7929 45.5659 18.6034 REMARK 3 T TENSOR REMARK 3 T11: 0.0847 T22: 0.1979 REMARK 3 T33: 0.1620 T12: 0.0368 REMARK 3 T13: -0.0365 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 0.4205 L22: 0.4012 REMARK 3 L33: 0.3288 L12: 0.1463 REMARK 3 L13: 0.0614 L23: -0.2257 REMARK 3 S TENSOR REMARK 3 S11: 0.0370 S12: 0.1464 S13: -0.0407 REMARK 3 S21: -0.0036 S22: -0.0505 S23: 0.2391 REMARK 3 S31: 0.0618 S32: -0.1864 S33: 0.1148 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 292 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2480 67.6195 18.9364 REMARK 3 T TENSOR REMARK 3 T11: 0.2439 T22: 0.1828 REMARK 3 T33: 0.1636 T12: 0.0535 REMARK 3 T13: 0.0742 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 0.1776 L22: 0.1590 REMARK 3 L33: 0.2082 L12: 0.1639 REMARK 3 L13: 0.2049 L23: 0.1810 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.1618 S13: 0.1203 REMARK 3 S21: -0.0719 S22: 0.0266 S23: -0.0118 REMARK 3 S31: -0.1897 S32: -0.0102 S33: -0.0010 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 318 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7390 59.1366 3.4327 REMARK 3 T TENSOR REMARK 3 T11: 0.2624 T22: 0.3649 REMARK 3 T33: 0.1351 T12: 0.1522 REMARK 3 T13: 0.0313 T23: 0.0625 REMARK 3 L TENSOR REMARK 3 L11: 0.5070 L22: 0.4829 REMARK 3 L33: 0.0581 L12: 0.3139 REMARK 3 L13: 0.1485 L23: 0.1350 REMARK 3 S TENSOR REMARK 3 S11: 0.0501 S12: 0.2778 S13: -0.0351 REMARK 3 S21: -0.2521 S22: 0.0453 S23: -0.0362 REMARK 3 S31: -0.3715 S32: -0.1047 S33: 0.0588 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N91 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082904. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX 225 HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47522 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 92.852 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 22.00 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : 0.12700 REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 20.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75900 REMARK 200 R SYM FOR SHELL (I) : 0.75900 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX AUTOSOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (42 MG/ML, 10 MM HEPES PH 7.5, REMARK 280 5 MM DTT, 10 MM D-GLUCURONATE); RESERVOIR (0.2 M MAGNESIUM REMARK 280 CHLORIDE, 0.1 M CITRATE PH 5.5, 40% (V/V) PEG400); REMARK 280 CRYOPROTECTION (100% RESERVOIR), SITTING DROP VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.13900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.27800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.27800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 22.13900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.41700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 549 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 603 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 660 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 672 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 768 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 PHE A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 ILE A 8 REMARK 465 PHE A 9 REMARK 465 MSE A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 ILE A 13 REMARK 465 PHE A 14 REMARK 465 ALA A 15 REMARK 465 LEU A 16 REMARK 465 ILE A 17 REMARK 465 PHE A 18 REMARK 465 THR A 19 REMARK 465 ALA A 20 REMARK 465 CYS A 21 REMARK 465 SER A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 ASP A 25 REMARK 465 SER A 26 REMARK 465 GLU A 27 REMARK 465 SER A 28 REMARK 465 GLN A 29 REMARK 465 LYS A 338 REMARK 465 GLU A 339 REMARK 465 GLY A 340 REMARK 465 ALA A 341 REMARK 465 GLU A 342 REMARK 465 ASN A 343 REMARK 465 LEU A 344 REMARK 465 TYR A 345 REMARK 465 PHE A 346 REMARK 465 GLN A 347 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 556 O HOH A 642 2.02 REMARK 500 O HOH A 705 O HOH A 713 2.03 REMARK 500 O HOH A 702 O HOH A 713 2.04 REMARK 500 O PHE A 109 O HOH A 607 2.09 REMARK 500 O HOH A 579 O HOH A 595 2.14 REMARK 500 O HOH A 611 O HOH A 705 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LEU A 73 O LEU A 73 4556 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 60 30.71 -142.99 REMARK 500 SER A 191 -162.89 -116.35 REMARK 500 ASN A 215 -178.33 -175.77 REMARK 500 THR A 221 -60.47 -107.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510023 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4N8Y RELATED DB: PDB DBREF 4N91 A 2 340 UNP C7RDZ3 C7RDZ3_ANAPD 2 340 SEQADV 4N91 MSE A 1 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 ALA A 341 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 GLU A 342 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 ASN A 343 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 LEU A 344 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 TYR A 345 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 PHE A 346 UNP C7RDZ3 EXPRESSION TAG SEQADV 4N91 GLN A 347 UNP C7RDZ3 EXPRESSION TAG SEQRES 1 A 347 MSE LYS SER LYS PHE LYS THR ILE PHE MSE ALA VAL ILE SEQRES 2 A 347 PHE ALA LEU ILE PHE THR ALA CYS SER LYS ALA ASP SER SEQRES 3 A 347 GLU SER GLN LYS THR ILE ILE ARG VAL GLY HIS ASN GLN SEQRES 4 A 347 SER GLN ASN HIS PRO THR HIS LEU GLY LEU LEU ALA PHE SEQRES 5 A 347 GLU GLU TYR VAL GLU ASP LYS LEU GLY ASP LYS TYR ASP SEQRES 6 A 347 ILE GLN VAL TYR PRO SER GLU LEU LEU GLY SER GLN ILE SEQRES 7 A 347 ASP MSE VAL GLN LEU THR GLN THR GLY ALA ILE ASN ILE SEQRES 8 A 347 CYS VAL ALA SER ASN ALA ILE LEU GLU THR PHE ASN ASP SEQRES 9 A 347 VAL TRP GLU ILE PHE ASN LEU PRO TYR LEU PHE ALA SER SEQRES 10 A 347 SER GLU ALA TYR HIS HIS VAL MSE ASP ASP PRO GLU ILE SEQRES 11 A 347 VAL LYS PRO ILE PHE GLU SER THR ARG GLU GLY GLY PHE SEQRES 12 A 347 GLU GLY VAL THR TRP LEU ASP ALA GLY SER ARG SER PHE SEQRES 13 A 347 TYR THR LYS ASP LYS PRO VAL ASN SER PRO GLU ASP LEU SEQRES 14 A 347 SER GLY LEU LYS ILE ARG VAL GLN GLN SER PRO THR ASN SEQRES 15 A 347 VAL ARG MSE MSE ASP LEU LEU GLY SER SER ALA SER PRO SEQRES 16 A 347 MSE GLY PHE GLY GLU VAL TYR THR ALA LEU GLN SER GLY SEQRES 17 A 347 ILE ILE ASP GLY ALA GLU ASN ASN GLU MSE SER LEU THR SEQRES 18 A 347 ASP ASN GLY HIS GLY GLU VAL CYS LYS TYR TYR SER TYR SEQRES 19 A 347 ASP MSE HIS GLN MSE VAL PRO ASP ILE VAL ILE ALA ASN SEQRES 20 A 347 TYR SER TRP LEU GLU GLY LEU PRO GLU GLU ASP ARG LYS SEQRES 21 A 347 VAL PHE ASP GLU GLY PHE LYS VAL LEU ASN GLU VAL GLN SEQRES 22 A 347 ARG LYS GLU TRP LYS VAL ALA VAL ASP LYS ALA LYS GLU SEQRES 23 A 347 LYS ALA SER GLU MSE GLY VAL GLU PHE ILE TYR PRO ASP SEQRES 24 A 347 GLN LYS PRO PHE VAL ASP ALA VAL ALA PRO LEU THR LYS SEQRES 25 A 347 GLU VAL LEU GLU ARG ASN ASP LYS LEU ALA PRO PHE TYR SEQRES 26 A 347 ASP ALA ILE GLN LYS TYR ASN GLU GLU TYR PRO ALA LYS SEQRES 27 A 347 GLU GLY ALA GLU ASN LEU TYR PHE GLN MODRES 4N91 MSE A 80 MET SELENOMETHIONINE MODRES 4N91 MSE A 125 MET SELENOMETHIONINE MODRES 4N91 MSE A 185 MET SELENOMETHIONINE MODRES 4N91 MSE A 186 MET SELENOMETHIONINE MODRES 4N91 MSE A 196 MET SELENOMETHIONINE MODRES 4N91 MSE A 218 MET SELENOMETHIONINE MODRES 4N91 MSE A 236 MET SELENOMETHIONINE MODRES 4N91 MSE A 239 MET SELENOMETHIONINE MODRES 4N91 MSE A 291 MET SELENOMETHIONINE HET MSE A 80 17 HET MSE A 125 17 HET MSE A 185 17 HET MSE A 186 17 HET MSE A 196 17 HET MSE A 218 34 HET MSE A 236 17 HET MSE A 239 17 HET MSE A 291 17 HET GCU A 401 13 HET BDP A 402 13 HET CL A 403 1 HET PG4 A 404 13 HETNAM MSE SELENOMETHIONINE HETNAM GCU ALPHA-D-GLUCOPYRANURONIC ACID HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN BDP D-GLUCURONIC ACID FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 GCU C6 H10 O7 FORMUL 3 BDP C6 H10 O7 FORMUL 4 CL CL 1- FORMUL 5 PG4 C8 H18 O5 FORMUL 6 HOH *278(H2 O) HELIX 1 1 HIS A 43 GLY A 61 1 19 HELIX 2 2 SER A 76 THR A 86 1 11 HELIX 3 3 ASN A 96 GLU A 100 1 5 HELIX 4 4 THR A 101 PHE A 102 5 2 HELIX 5 5 ASN A 103 LEU A 111 5 9 HELIX 6 6 SER A 117 ASP A 126 1 10 HELIX 7 7 ASP A 127 GLU A 136 1 10 HELIX 8 8 THR A 138 GLY A 141 5 4 HELIX 9 9 SER A 165 SER A 170 5 6 HELIX 10 10 SER A 179 LEU A 189 1 11 HELIX 11 11 GLY A 197 GLY A 199 5 3 HELIX 12 12 GLU A 200 SER A 207 1 8 HELIX 13 13 GLU A 217 ASP A 222 1 6 HELIX 14 14 GLY A 224 VAL A 228 5 5 HELIX 15 15 TYR A 248 LEU A 254 1 7 HELIX 16 16 PRO A 255 MSE A 291 1 37 HELIX 17 17 GLN A 300 ASN A 318 1 19 HELIX 18 18 LEU A 321 TYR A 335 1 15 SHEET 1 A 5 TYR A 64 TYR A 69 0 SHEET 2 A 5 THR A 31 GLY A 36 1 N ILE A 33 O GLN A 67 SHEET 3 A 5 ILE A 91 SER A 95 1 O ILE A 91 N GLY A 36 SHEET 4 A 5 ASP A 242 ASN A 247 -1 O ILE A 243 N ALA A 94 SHEET 5 A 5 PHE A 143 LEU A 149 -1 N VAL A 146 O VAL A 244 SHEET 1 B 4 GLY A 212 ASN A 215 0 SHEET 2 B 4 ARG A 154 THR A 158 -1 N TYR A 157 O ALA A 213 SHEET 3 B 4 TYR A 231 GLN A 238 -1 O GLN A 238 N ARG A 154 SHEET 4 B 4 GLU A 294 ILE A 296 1 O ILE A 296 N TYR A 232 SHEET 1 C 2 LYS A 173 VAL A 176 0 SHEET 2 C 2 SER A 192 PRO A 195 1 O SER A 192 N ILE A 174 LINK C ASP A 79 N MSE A 80 1555 1555 1.33 LINK C MSE A 80 N VAL A 81 1555 1555 1.33 LINK C VAL A 124 N MSE A 125 1555 1555 1.33 LINK C MSE A 125 N ASP A 126 1555 1555 1.34 LINK C ARG A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N MSE A 186 1555 1555 1.34 LINK C MSE A 186 N ASP A 187 1555 1555 1.34 LINK C PRO A 195 N MSE A 196 1555 1555 1.33 LINK C MSE A 196 N GLY A 197 1555 1555 1.33 LINK C GLU A 217 N AMSE A 218 1555 1555 1.33 LINK C GLU A 217 N BMSE A 218 1555 1555 1.33 LINK C AMSE A 218 N SER A 219 1555 1555 1.33 LINK C BMSE A 218 N SER A 219 1555 1555 1.33 LINK C ASP A 235 N MSE A 236 1555 1555 1.34 LINK C MSE A 236 N HIS A 237 1555 1555 1.33 LINK C GLN A 238 N MSE A 239 1555 1555 1.34 LINK C MSE A 239 N VAL A 240 1555 1555 1.33 LINK C GLU A 290 N MSE A 291 1555 1555 1.33 LINK C MSE A 291 N GLY A 292 1555 1555 1.33 CRYST1 107.216 107.216 66.417 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009327 0.005385 0.000000 0.00000 SCALE2 0.000000 0.010770 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015056 0.00000