HEADER TRANSFERASE 22-OCT-13 4NAX TITLE CRYSTAL STRUCTURE OF GLUTATHIONE TRANSFERASE PPUT_1760 FROM TITLE 2 PSEUDOMONAS PUTIDA, TARGET EFI-507288, WITH ONE GLUTATHIONE DISULFIDE TITLE 3 BOUND PER ONE PROTEIN SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE, N-TERMINAL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 351746; SOURCE 4 STRAIN: F1 / ATCC 700007; SOURCE 5 GENE: PPUT_1760; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GLUTATHIONE S-TRANSFERASE, ENZYME FUNCTION INITIATIVE, EFI, KEYWDS 2 STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,H.J.IMKER,N.AL OBAIDI, AUTHOR 3 M.STEAD,J.LOVE,J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 3 20-SEP-23 4NAX 1 REMARK SEQADV REVDAT 2 24-JAN-18 4NAX 1 AUTHOR JRNL REVDAT 1 06-NOV-13 4NAX 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 H.J.IMKER,N.AL OBAIDI,M.STEAD,J.LOVE,J.A.GERLT, JRNL AUTH 4 R.N.ARMSTRONG,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF GLUTATHIONE TRANSFERASE PPUT_1760 FROM JRNL TITL 2 PSEUDOMONAS PUTIDA, TARGET EFI-507288 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 113148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.101 REMARK 3 R VALUE (WORKING SET) : 0.101 REMARK 3 FREE R VALUE : 0.131 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3502 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8133 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE SET COUNT : 275 REMARK 3 BIN FREE R VALUE : 0.1770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3771 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.64000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.034 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.022 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.150 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.987 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.981 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4058 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3868 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5495 ; 1.431 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8910 ; 0.854 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 5.632 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 205 ;38.304 ;23.805 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 681 ;11.814 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;10.924 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 561 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4655 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1004 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1890 ; 3.218 ; 2.352 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1891 ; 3.217 ; 2.352 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2365 ; 3.135 ; 3.969 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2366 ; 3.135 ; 3.971 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2168 ; 7.505 ; 2.983 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2166 ; 7.506 ; 2.983 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3119 ; 7.453 ; 4.721 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5211 ; 5.955 ; 9.990 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5212 ; 5.954 ; 9.992 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7926 ;10.918 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 115 ;26.756 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 8248 ;16.532 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NAX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082972. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 116741 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4MF6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN IN 10 MM HEPES, PH 7.5, 150 MM REMARK 280 SODIUM CHLORIDE, 5% GLYCEROL, RESERVOIR: 20% PEG1500, 20% REMARK 280 GLYCEROL, 5 MM GSH, CRYOPROTECTANT: NONE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.67100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.91050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.91050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.67100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 HIS A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 MET B 1 REMARK 465 ALA B 232 REMARK 465 GLU B 233 REMARK 465 ASN B 234 REMARK 465 LEU B 235 REMARK 465 TYR B 236 REMARK 465 PHE B 237 REMARK 465 GLN B 238 REMARK 465 GLY B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 465 HIS B 243 REMARK 465 HIS B 244 REMARK 465 HIS B 245 REMARK 465 HIS B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 HIS B 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 52.52 -100.21 REMARK 500 GLU A 89 110.68 80.51 REMARK 500 PHE A 139 -153.50 -97.33 REMARK 500 GLU A 194 -84.90 -101.85 REMARK 500 PHE A 207 76.97 -101.18 REMARK 500 ASN B 78 51.14 -102.04 REMARK 500 GLU B 89 111.36 79.91 REMARK 500 PHE B 139 -156.24 -93.92 REMARK 500 GLU B 194 -68.60 -98.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDS A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDS B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-507288 RELATED DB: TARGETTRACK DBREF 4NAX A 1 231 UNP A5W1A6 A5W1A6_PSEP1 1 231 DBREF 4NAX B 1 231 UNP A5W1A6 A5W1A6_PSEP1 1 231 SEQADV 4NAX HIS A 225 UNP A5W1A6 ARG 225 CONFLICT SEQADV 4NAX ALA A 232 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLU A 233 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX ASN A 234 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX LEU A 235 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX TYR A 236 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX PHE A 237 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLN A 238 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLY A 239 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 240 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 241 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 242 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 243 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 244 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 245 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 246 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 247 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 248 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS A 249 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 225 UNP A5W1A6 ARG 225 CONFLICT SEQADV 4NAX ALA B 232 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLU B 233 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX ASN B 234 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX LEU B 235 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX TYR B 236 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX PHE B 237 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLN B 238 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX GLY B 239 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 240 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 241 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 242 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 243 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 244 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 245 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 246 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 247 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 248 UNP A5W1A6 EXPRESSION TAG SEQADV 4NAX HIS B 249 UNP A5W1A6 EXPRESSION TAG SEQRES 1 A 249 MET THR GLU LEU SER ALA PHE PRO ILE THR ARG LYS TRP SEQRES 2 A 249 PRO ALA LYS HIS PRO GLU ARG LEU GLN LEU TYR SER LEU SEQRES 3 A 249 PRO THR PRO ASN GLY VAL LYS VAL SER ILE MET LEU GLU SEQRES 4 A 249 GLU ILE GLY LEU ALA TYR GLU ALA HIS LYS VAL SER PHE SEQRES 5 A 249 ASP ASN ASP ASP GLN LEU SER PRO GLU PHE ILE SER LEU SEQRES 6 A 249 SER ALA ASN ASN LYS ILE PRO ALA ILE LEU ASP PRO ASN SEQRES 7 A 249 GLY PRO GLY GLY GLN PRO LEU PRO LEU PHE GLU SER GLY SEQRES 8 A 249 ALA ILE LEU GLN TYR LEU ALA GLU LYS SER GLY GLN LEU SEQRES 9 A 249 LEU SER GLN ASP PRO ALA GLN ARG TYR GLN THR LEU GLN SEQRES 10 A 249 TRP LEU MET PHE GLN MET GLY GLY ILE GLY PRO MET PHE SEQRES 11 A 249 GLY GLN VAL GLY PHE PHE HIS PHE PHE ALA GLY LYS GLU SEQRES 12 A 249 TYR GLU ASP LYS ARG PRO ARG ASP ARG TYR VAL ASN GLU SEQRES 13 A 249 SER LYS ARG LEU LEU GLY VAL LEU ASP ARG HIS LEU LYS SEQRES 14 A 249 GLY ARG GLN TRP MET ALA GLU GLU TYR SER ILE ALA ASP SEQRES 15 A 249 ILE ALA ILE PHE PRO TRP VAL ARG ASN LEU VAL GLU ARG SEQRES 16 A 249 TYR ASN ALA ARG ASP LEU VAL GLY PHE ASP GLN PHE LYS SEQRES 17 A 249 GLU VAL GLN ARG VAL LEU ALA ASN PHE LEU GLU ARG PRO SEQRES 18 A 249 ALA VAL GLN HIS GLY LEU LYS ILE PRO GLY ALA GLU ASN SEQRES 19 A 249 LEU TYR PHE GLN GLY HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 20 A 249 HIS HIS SEQRES 1 B 249 MET THR GLU LEU SER ALA PHE PRO ILE THR ARG LYS TRP SEQRES 2 B 249 PRO ALA LYS HIS PRO GLU ARG LEU GLN LEU TYR SER LEU SEQRES 3 B 249 PRO THR PRO ASN GLY VAL LYS VAL SER ILE MET LEU GLU SEQRES 4 B 249 GLU ILE GLY LEU ALA TYR GLU ALA HIS LYS VAL SER PHE SEQRES 5 B 249 ASP ASN ASP ASP GLN LEU SER PRO GLU PHE ILE SER LEU SEQRES 6 B 249 SER ALA ASN ASN LYS ILE PRO ALA ILE LEU ASP PRO ASN SEQRES 7 B 249 GLY PRO GLY GLY GLN PRO LEU PRO LEU PHE GLU SER GLY SEQRES 8 B 249 ALA ILE LEU GLN TYR LEU ALA GLU LYS SER GLY GLN LEU SEQRES 9 B 249 LEU SER GLN ASP PRO ALA GLN ARG TYR GLN THR LEU GLN SEQRES 10 B 249 TRP LEU MET PHE GLN MET GLY GLY ILE GLY PRO MET PHE SEQRES 11 B 249 GLY GLN VAL GLY PHE PHE HIS PHE PHE ALA GLY LYS GLU SEQRES 12 B 249 TYR GLU ASP LYS ARG PRO ARG ASP ARG TYR VAL ASN GLU SEQRES 13 B 249 SER LYS ARG LEU LEU GLY VAL LEU ASP ARG HIS LEU LYS SEQRES 14 B 249 GLY ARG GLN TRP MET ALA GLU GLU TYR SER ILE ALA ASP SEQRES 15 B 249 ILE ALA ILE PHE PRO TRP VAL ARG ASN LEU VAL GLU ARG SEQRES 16 B 249 TYR ASN ALA ARG ASP LEU VAL GLY PHE ASP GLN PHE LYS SEQRES 17 B 249 GLU VAL GLN ARG VAL LEU ALA ASN PHE LEU GLU ARG PRO SEQRES 18 B 249 ALA VAL GLN HIS GLY LEU LYS ILE PRO GLY ALA GLU ASN SEQRES 19 B 249 LEU TYR PHE GLN GLY HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 20 B 249 HIS HIS HET GDS A 301 40 HET GOL A 302 6 HET FMT A 303 3 HET GDS B 301 40 HET GOL B 302 6 HET GOL B 303 6 HETNAM GDS OXIDIZED GLUTATHIONE DISULFIDE HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GDS 2(C20 H32 N6 O12 S2) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 5 FMT C H2 O2 FORMUL 9 HOH *543(H2 O) HELIX 1 1 GLU A 3 PHE A 7 5 5 HELIX 2 2 PRO A 8 TRP A 13 1 6 HELIX 3 3 ASN A 30 GLY A 42 1 13 HELIX 4 4 SER A 51 LEU A 58 5 8 HELIX 5 5 SER A 59 SER A 66 1 8 HELIX 6 6 GLY A 79 GLN A 83 5 5 HELIX 7 7 GLU A 89 GLY A 102 1 14 HELIX 8 8 ASP A 108 GLY A 125 1 18 HELIX 9 9 GLY A 125 PHE A 138 1 14 HELIX 10 10 PHE A 139 TYR A 144 5 6 HELIX 11 11 LYS A 147 LYS A 169 1 23 HELIX 12 12 SER A 179 GLU A 194 1 16 HELIX 13 13 GLY A 203 GLN A 206 5 4 HELIX 14 14 PHE A 207 ARG A 220 1 14 HELIX 15 15 ARG A 220 LEU A 227 1 8 HELIX 16 16 ALA A 232 TYR A 236 5 5 HELIX 17 17 GLU B 3 PHE B 7 5 5 HELIX 18 18 PRO B 8 TRP B 13 1 6 HELIX 19 19 THR B 28 GLY B 42 1 15 HELIX 20 20 ASP B 55 LEU B 58 5 4 HELIX 21 21 SER B 59 SER B 64 1 6 HELIX 22 22 GLY B 79 GLN B 83 5 5 HELIX 23 23 GLU B 89 GLY B 102 1 14 HELIX 24 24 ASP B 108 GLY B 125 1 18 HELIX 25 25 GLY B 125 PHE B 138 1 14 HELIX 26 26 PHE B 139 TYR B 144 5 6 HELIX 27 27 LYS B 147 LYS B 169 1 23 HELIX 28 28 SER B 179 GLU B 194 1 16 HELIX 29 29 GLY B 203 GLN B 206 5 4 HELIX 30 30 PHE B 207 ARG B 220 1 14 HELIX 31 31 ARG B 220 LEU B 227 1 8 SHEET 1 A 4 TYR A 45 LYS A 49 0 SHEET 2 A 4 LEU A 21 SER A 25 1 N LEU A 21 O GLU A 46 SHEET 3 A 4 ALA A 73 ASP A 76 -1 O ALA A 73 N TYR A 24 SHEET 4 A 4 LEU A 85 PHE A 88 -1 O LEU A 87 N ILE A 74 SHEET 1 B 4 TYR B 45 LYS B 49 0 SHEET 2 B 4 LEU B 21 SER B 25 1 N LEU B 23 O GLU B 46 SHEET 3 B 4 ALA B 73 ASP B 76 -1 O ALA B 73 N TYR B 24 SHEET 4 B 4 LEU B 85 PHE B 88 -1 O LEU B 87 N ILE B 74 CISPEP 1 ILE A 71 PRO A 72 0 -3.61 CISPEP 2 ILE A 229 PRO A 230 0 2.12 CISPEP 3 ILE B 71 PRO B 72 0 -2.73 CISPEP 4 ILE B 229 PRO B 230 0 -1.43 SITE 1 AC1 24 THR A 28 ASN A 30 PHE A 52 GLN A 57 SITE 2 AC1 24 LYS A 70 ILE A 71 PRO A 72 GLU A 89 SITE 3 AC1 24 SER A 90 MET A 123 GLY A 127 PRO A 128 SITE 4 AC1 24 GLY A 131 TRP A 188 GOL A 302 HOH A 402 SITE 5 AC1 24 HOH A 410 HOH A 414 HOH A 439 HOH A 492 SITE 6 AC1 24 HOH A 493 HOH A 515 HOH A 546 ARG B 152 SITE 1 AC2 10 ASN A 68 LYS A 70 GLU A 89 GDS A 301 SITE 2 AC2 10 HOH A 439 GLY B 124 GLY B 125 GLU B 156 SITE 3 AC2 10 ARG B 159 HOH B 445 SITE 1 AC3 5 PHE A 136 HIS A 137 LYS A 147 ARG A 150 SITE 2 AC3 5 HOH A 593 SITE 1 AC4 24 ARG A 152 THR B 28 ASN B 30 PHE B 52 SITE 2 AC4 24 GLN B 57 LYS B 70 ILE B 71 PRO B 72 SITE 3 AC4 24 GLU B 89 SER B 90 MET B 123 GLY B 127 SITE 4 AC4 24 PRO B 128 GLY B 131 TRP B 188 GOL B 302 SITE 5 AC4 24 HOH B 404 HOH B 410 HOH B 418 HOH B 455 SITE 6 AC4 24 HOH B 456 HOH B 488 HOH B 518 HOH B 561 SITE 1 AC5 9 GLY A 124 GLY A 125 ARG A 159 HOH A 436 SITE 2 AC5 9 ASN B 68 LYS B 70 GLU B 89 GDS B 301 SITE 3 AC5 9 HOH B 456 SITE 1 AC6 11 ARG A 159 LEU B 58 ILE B 63 ASN B 69 SITE 2 AC6 11 ARG B 150 ASP B 151 HOH B 476 HOH B 562 SITE 3 AC6 11 HOH B 591 HOH B 593 HOH B 652 CRYST1 59.342 66.620 119.821 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016851 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008346 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999878 0.008660 -0.013036 -21.19809 1 MTRIX2 2 0.012976 -0.006963 -0.999892 13.60702 1 MTRIX3 2 -0.008750 -0.999938 0.006850 13.34350 1