HEADER HYDROLASE 28-OCT-13 4NE7 TITLE CRYSTAL STRUCTURE OF ENGINEERED KUMAMOLISIN-AS FROM ALICYCLOBACILLUS TITLE 2 SENDAIENSIS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET TITLE 3 OR367 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KUMAMOLISIN-AS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 190-553; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALICYCLOBACILLUS SENDAIENSIS; SOURCE 3 ORGANISM_TAXID: 192387; SOURCE 4 GENE: SCPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, ENGINEERED PROTEIN, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.GUAN,I.S.PULTZ,J.B.SIEGEL,J.SEETHARAMAN,G.KORNHABER,M.MAGLAQUI, AUTHOR 2 L.MAO,R.XIAO,J.K.EVERETT,D.BAKER,G.T.MONTELIONE,NORTHEAST STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (NESG) REVDAT 2 20-SEP-23 4NE7 1 REMARK LINK REVDAT 1 20-NOV-13 4NE7 0 JRNL AUTH R.GUAN,I.S.PULTZ,J.SEETHARAMAN,G.KORNHABER,L.MAO,R.XIAO, JRNL AUTH 2 M.MAGLAQUI,J.K.EVERETT,T.B.ACTON,D.BAKER,G.T.MONTELIONE JRNL TITL NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR367 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 17999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7960 - 5.8670 1.00 1394 154 0.1860 0.1870 REMARK 3 2 5.8670 - 4.6590 1.00 1356 148 0.1550 0.1790 REMARK 3 3 4.6590 - 4.0700 1.00 1327 146 0.1380 0.1670 REMARK 3 4 4.0700 - 3.6980 0.96 1264 140 0.1910 0.2580 REMARK 3 5 3.6980 - 3.4330 0.95 1256 141 0.2260 0.2510 REMARK 3 6 3.4330 - 3.2310 0.97 1273 135 0.2160 0.2550 REMARK 3 7 3.2310 - 3.0690 0.99 1307 145 0.2020 0.2510 REMARK 3 8 3.0690 - 2.9360 0.98 1274 141 0.2120 0.2970 REMARK 3 9 2.9360 - 2.8230 0.97 1261 139 0.2080 0.2850 REMARK 3 10 2.8230 - 2.7250 0.94 1217 136 0.2290 0.3160 REMARK 3 11 2.7250 - 2.6400 0.80 1045 116 0.3310 0.4380 REMARK 3 12 2.6400 - 2.5650 0.78 1036 113 0.2430 0.3220 REMARK 3 13 2.5650 - 2.4970 0.93 1206 129 0.2380 0.3100 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2606 REMARK 3 ANGLE : 0.787 3579 REMARK 3 CHIRALITY : 0.047 402 REMARK 3 PLANARITY : 0.004 485 REMARK 3 DIHEDRAL : 11.453 896 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000083090. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97907 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19077 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 44.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.27500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1SN7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION - 100MM NACL, 5MM REMARK 280 DTT, 0.02% NAN3, 10MM TRIS-HCL (PH 7.5), RESERVOIR SOLUTION - 15% REMARK 280 PEG 8000, 0.1 M MES PH 6.0, 0.2 M ZINC ACETATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.66133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.33067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.33067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.66133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER,37.57 KD,90.1% REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -325.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 166.32750 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 96.02923 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 50.66133 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 565 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 359 REMARK 465 SER A 360 REMARK 465 GLN A 361 REMARK 465 PRO A 362 REMARK 465 GLN A 363 REMARK 465 PRO A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 THR A 367 REMARK 465 GLU A 368 REMARK 465 ASN A 369 REMARK 465 LEU A 370 REMARK 465 TYR A 371 REMARK 465 PHE A 372 REMARK 465 GLN A 373 REMARK 465 SER A 374 REMARK 465 GLY A 375 REMARK 465 ALA A 376 REMARK 465 LEU A 377 REMARK 465 GLU A 378 REMARK 465 HIS A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 HIS A 382 REMARK 465 HIS A 383 REMARK 465 HIS A 384 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 503 O HOH A 629 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 22 19.05 -144.72 REMARK 500 ASN A 66 95.57 -60.01 REMARK 500 ASN A 209 96.32 -160.18 REMARK 500 ASP A 213 -62.02 -126.60 REMARK 500 HIS A 233 34.46 -95.70 REMARK 500 ALA A 244 64.06 61.19 REMARK 500 ARG A 327 -77.71 -104.86 REMARK 500 PRO A 339 24.28 -77.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 116 NE2 REMARK 620 2 ASP A 150 OD2 101.7 REMARK 620 3 ASP A 150 OD1 134.2 56.8 REMARK 620 4 HOH A 575 O 111.8 82.5 105.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 171 OE1 REMARK 620 2 ASP A 173 OD2 79.2 REMARK 620 3 HIS A 177 NE2 92.4 92.0 REMARK 620 4 HOH A 547 O 127.8 128.2 124.1 REMARK 620 5 HOH A 582 O 147.4 68.4 85.6 78.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 210 OD1 REMARK 620 2 ASP A 258 OD2 122.6 REMARK 620 3 HOH A 543 O 114.0 114.3 REMARK 620 4 HOH A 564 O 68.8 102.2 69.2 REMARK 620 5 HOH A 598 O 108.2 110.1 78.3 141.3 REMARK 620 6 HOH A 629 O 93.3 73.3 134.5 156.0 58.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 316 OD1 REMARK 620 2 ILE A 317 O 81.2 REMARK 620 3 GLY A 334 O 94.3 82.7 REMARK 620 4 GLY A 336 O 98.9 176.1 93.4 REMARK 620 5 ASP A 338 OD2 158.8 80.9 94.5 99.8 REMARK 620 6 HOH A 502 O 93.0 83.2 162.9 100.7 73.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 319 OE1 REMARK 620 2 GLU A 319 OE2 53.6 REMARK 620 3 HOH A 562 O 120.9 80.6 REMARK 620 4 HOH A 568 O 128.3 163.1 85.9 REMARK 620 5 HOH A 576 O 73.1 122.9 152.7 68.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NESG-OR367 RELATED DB: TARGETTRACK DBREF 4NE7 A 1 384 PDB 4NE7 4NE7 1 384 SEQRES 1 A 384 ALA ALA PRO THR ALA TYR THR PRO LEU ASP VAL ALA GLN SEQRES 2 A 384 ALA TYR GLN PHE PRO GLU GLY LEU ASP GLY GLN GLY GLN SEQRES 3 A 384 CYS ILE ALA ILE ILE GLU LEU GLY GLY GLY TYR ASP GLU SEQRES 4 A 384 ALA SER LEU ALA GLN TYR PHE ALA SER LEU GLY VAL PRO SEQRES 5 A 384 ALA PRO GLN VAL VAL SER VAL SER VAL ASP GLY ALA SER SEQRES 6 A 384 ASN GLN PRO THR GLY ASP PRO LYS GLY PRO ASP GLY GLU SEQRES 7 A 384 VAL GLU LEU ASP ILE GLU VAL ALA GLY ALA LEU ALA PRO SEQRES 8 A 384 GLY ALA LYS PHE ALA VAL TYR PHE ALA PRO ASP THR THR SEQRES 9 A 384 ALA GLY PHE LEU ASP ALA ILE THR THR ALA ILE HIS ASP SEQRES 10 A 384 PRO THR LEU LYS PRO SER VAL VAL SER ILE SER TRP SER SEQRES 11 A 384 GLY PRO GLU ASP SER TRP THR SER ALA ALA ILE ALA ALA SEQRES 12 A 384 MET ASN ARG ALA PHE LEU ASP ALA ALA ALA LEU GLY VAL SEQRES 13 A 384 THR VAL LEU ALA ALA ALA GLY ASP SER GLY SER THR GLY SEQRES 14 A 384 GLY GLU GLN ASP GLY LEU TYR HIS VAL HIS PHE PRO ALA SEQRES 15 A 384 ALA SER PRO TYR VAL LEU ALA CYS GLY GLY THR ARG LEU SEQRES 16 A 384 VAL ALA SER GLY GLY ARG ILE ALA GLN GLU THR VAL TRP SEQRES 17 A 384 ASN ASP GLY PRO ASP GLY GLY ALA THR GLY GLY GLY VAL SEQRES 18 A 384 SER ARG ILE PHE PRO LEU PRO ALA TRP GLN GLU HIS ALA SEQRES 19 A 384 ASN VAL PRO PRO SER ALA ASN PRO GLY ALA SER SER GLY SEQRES 20 A 384 ARG GLY VAL PRO ASP LEU ALA GLY ASN ALA ASP PRO ALA SEQRES 21 A 384 THR GLY TYR GLU VAL VAL ILE ASP GLY GLU ALA THR VAL SEQRES 22 A 384 ILE GLY GLY THR SER ALA VAL ALA PRO LEU PHE ALA ALA SEQRES 23 A 384 LEU VAL ALA ARG ILE ASN GLN LYS LEU GLY LYS ALA VAL SEQRES 24 A 384 GLY TYR LEU ASN PRO THR LEU TYR GLN LEU PRO ALA ASP SEQRES 25 A 384 VAL PHE HIS ASP ILE THR GLU GLY ASN ASN ASP ILE ALA SEQRES 26 A 384 ASN ARG ALA GLN ILE TYR GLN ALA GLY PRO GLY TRP ASP SEQRES 27 A 384 PRO CYS THR GLY LEU GLY SER PRO ILE GLY VAL ARG LEU SEQRES 28 A 384 LEU GLN ALA LEU LEU PRO SER ALA SER GLN PRO GLN PRO SEQRES 29 A 384 GLY SER THR GLU ASN LEU TYR PHE GLN SER GLY ALA LEU SEQRES 30 A 384 GLU HIS HIS HIS HIS HIS HIS HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET ZN A 405 1 HETNAM ZN ZINC ION FORMUL 2 ZN 5(ZN 2+) FORMUL 7 HOH *136(H2 O) HELIX 1 1 THR A 7 TYR A 15 1 9 HELIX 2 2 ASP A 38 GLY A 50 1 13 HELIX 3 3 GLY A 74 ALA A 90 1 17 HELIX 4 4 THR A 103 HIS A 116 1 14 HELIX 5 5 ASP A 134 TRP A 136 5 3 HELIX 6 6 THR A 137 LEU A 154 1 18 HELIX 7 7 PRO A 228 ASN A 235 5 8 HELIX 8 8 ASP A 258 GLY A 262 5 5 HELIX 9 9 GLY A 276 SER A 278 5 3 HELIX 10 10 ALA A 279 GLY A 296 1 18 HELIX 11 11 LEU A 302 TYR A 307 1 6 HELIX 12 12 GLN A 308 LEU A 309 5 2 HELIX 13 13 PRO A 310 ASP A 312 5 3 HELIX 14 14 ILE A 347 LEU A 356 1 10 SHEET 1 A 7 VAL A 56 SER A 60 0 SHEET 2 A 7 LYS A 94 PHE A 99 1 O PHE A 95 N VAL A 57 SHEET 3 A 7 CYS A 27 GLU A 32 1 N ILE A 28 O LYS A 94 SHEET 4 A 7 VAL A 124 ILE A 127 1 O VAL A 124 N ALA A 29 SHEET 5 A 7 THR A 157 ALA A 161 1 O THR A 157 N VAL A 125 SHEET 6 A 7 LEU A 188 ALA A 197 1 O LEU A 188 N VAL A 158 SHEET 7 A 7 ILE A 202 VAL A 207 -1 O THR A 206 N ARG A 194 SHEET 1 B 7 VAL A 56 SER A 60 0 SHEET 2 B 7 LYS A 94 PHE A 99 1 O PHE A 95 N VAL A 57 SHEET 3 B 7 CYS A 27 GLU A 32 1 N ILE A 28 O LYS A 94 SHEET 4 B 7 VAL A 124 ILE A 127 1 O VAL A 124 N ALA A 29 SHEET 5 B 7 THR A 157 ALA A 161 1 O THR A 157 N VAL A 125 SHEET 6 B 7 LEU A 188 ALA A 197 1 O LEU A 188 N VAL A 158 SHEET 7 B 7 LEU A 253 ASN A 256 1 O LEU A 253 N GLY A 191 SHEET 1 C 2 GLY A 131 PRO A 132 0 SHEET 2 C 2 HIS A 179 PHE A 180 -1 O PHE A 180 N GLY A 131 SHEET 1 D 2 GLY A 220 VAL A 221 0 SHEET 2 D 2 GLY A 249 VAL A 250 -1 O VAL A 250 N GLY A 220 SHEET 1 E 2 TYR A 263 ILE A 267 0 SHEET 2 E 2 GLU A 270 ILE A 274 -1 O THR A 272 N VAL A 265 SHEET 1 F 2 PHE A 314 HIS A 315 0 SHEET 2 F 2 SER A 345 PRO A 346 -1 O SER A 345 N HIS A 315 LINK NE2 HIS A 116 ZN ZN A 405 1555 1555 1.95 LINK OD2 ASP A 150 ZN ZN A 405 1555 1555 2.14 LINK OD1 ASP A 150 ZN ZN A 405 1555 1555 2.44 LINK OE1 GLU A 171 ZN ZN A 404 1555 1555 2.57 LINK OD2 ASP A 173 ZN ZN A 404 1555 1555 1.96 LINK NE2 HIS A 177 ZN ZN A 404 1555 1555 2.14 LINK OD1 ASP A 210 ZN ZN A 403 1555 1555 1.96 LINK OD2 ASP A 258 ZN ZN A 403 1555 1555 1.95 LINK OD1 ASP A 316 ZN ZN A 401 1555 1555 2.09 LINK O ILE A 317 ZN ZN A 401 1555 1555 2.46 LINK OE1 GLU A 319 ZN ZN A 402 1555 1555 2.24 LINK OE2 GLU A 319 ZN ZN A 402 1555 1555 2.58 LINK O GLY A 334 ZN ZN A 401 1555 1555 2.27 LINK O GLY A 336 ZN ZN A 401 1555 1555 2.20 LINK OD2 ASP A 338 ZN ZN A 401 1555 1555 2.38 LINK ZN ZN A 401 O HOH A 502 1555 1555 2.46 LINK ZN ZN A 402 O HOH A 562 1555 1555 2.11 LINK ZN ZN A 402 O HOH A 568 1555 1555 2.05 LINK ZN ZN A 402 O HOH A 576 1555 1555 1.98 LINK ZN ZN A 403 O HOH A 543 1555 1555 2.30 LINK ZN ZN A 403 O HOH A 564 1555 1555 2.04 LINK ZN ZN A 403 O HOH A 598 1555 1555 2.01 LINK ZN ZN A 403 O HOH A 629 1555 1555 2.56 LINK ZN ZN A 404 O HOH A 547 1555 1555 2.35 LINK ZN ZN A 404 O HOH A 582 1555 1555 2.05 LINK ZN ZN A 405 O HOH A 575 1555 1555 2.22 CISPEP 1 PHE A 180 PRO A 181 0 6.18 CISPEP 2 GLY A 211 PRO A 212 0 -0.78 CISPEP 3 VAL A 250 PRO A 251 0 1.23 CISPEP 4 ILE A 330 TYR A 331 0 -0.60 SITE 1 AC1 6 ASP A 316 ILE A 317 GLY A 334 GLY A 336 SITE 2 AC1 6 ASP A 338 HOH A 502 SITE 1 AC2 5 HIS A 315 GLU A 319 HOH A 562 HOH A 568 SITE 2 AC2 5 HOH A 576 SITE 1 AC3 6 ASP A 210 ASP A 258 HOH A 543 HOH A 564 SITE 2 AC3 6 HOH A 598 HOH A 629 SITE 1 AC4 6 ASP A 134 GLU A 171 ASP A 173 HIS A 177 SITE 2 AC4 6 HOH A 547 HOH A 582 SITE 1 AC5 4 ASP A 22 HIS A 116 ASP A 150 HOH A 575 CRYST1 110.885 110.885 75.992 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009018 0.005207 0.000000 0.00000 SCALE2 0.000000 0.010413 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013159 0.00000