data_4NHT # _entry.id 4NHT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NHT RCSB RCSB083220 WWPDB D_1000083220 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4N9R 'X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (1 day)' unspecified PDB 4NHP 'X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (4 days)' unspecified PDB 4NHQ 'X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (5 days)' unspecified PDB 4NHS 'X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (9 days)' unspecified PDB 4NIJ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NHT _pdbx_database_status.recvd_initial_deposition_date 2013-11-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Petruk, A.A.' 1 'Bikiel, D.E.' 2 'Vergara, A.' 3 'Merlino, A.' 4 # _citation.id primary _citation.title 'Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release.' _citation.journal_abbrev Inorg.Chem. _citation.journal_volume 53 _citation.page_first 10456 _citation.page_last 10462 _citation.year 2014 _citation.journal_id_ASTM INOCAJ _citation.country US _citation.journal_id_ISSN 0020-1669 _citation.journal_id_CSD 0009 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25215611 _citation.pdbx_database_id_DOI 10.1021/ic501498g # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Petruk, A.A.' 1 primary 'Vergara, A.' 2 primary 'Marasco, D.' 3 primary 'Bikiel, D.' 4 primary 'Doctorovich, F.' 5 primary 'Estrin, D.A.' 6 primary 'Merlino, A.' 7 # _cell.entry_id 4NHT _cell.length_a 78.583 _cell.length_b 78.583 _cell.length_c 37.118 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NHT _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14331.160 1 3.2.1.17 ? ? ? 2 non-polymer syn 'carbonyl(tetrachloro)oxidoiridium' 378.038 5 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C, Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 LYS n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 LYS n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name chickens _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NHT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2T8 non-polymer . 'carbonyl(tetrachloro)oxidoiridium' ? 'C Cl4 Ir O2' 378.038 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NHT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details 'Ir(Cl)5CO for 6 days, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2012-10-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4NHT _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 55.567 _reflns.d_resolution_high 1.650 _reflns.number_obs 14522 _reflns.number_all 14522 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4NHT _refine.ls_number_reflns_obs 11640 _refine.ls_number_reflns_all 12517 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.52 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2121 _refine.ls_R_factor_all 0.2121 _refine.ls_R_factor_R_work 0.1988 _refine.ls_R_factor_R_free 0.2279 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 877 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1118 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 25.52 # _struct.entry_id 4NHT _struct.title 'X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (6 days)' _struct.pdbx_descriptor 'Lysozyme C (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NHT _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'C-type lysozyme/alpha-lactalbumin family, peptidoglycan, bacterial cell wall, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 5 ILE A 88 ? SER A 100 ? ILE A 88 SER A 100 1 ? 13 HELX_P HELX_P6 6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P7 7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 8 ASP A 119 ? ILE A 124 ? ASP A 119 ILE A 124 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 1.976 ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.012 ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.053 ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.030 ? metalc1 metalc ? ? A SER 60 O ? ? ? 1_555 I NA . NA ? ? A SER 60 A NA 1008 1_555 ? ? ? ? ? ? ? 2.353 ? metalc2 metalc ? ? A CYS 64 O ? ? ? 1_555 I NA . NA ? ? A CYS 64 A NA 1008 1_555 ? ? ? ? ? ? ? 2.439 ? metalc3 metalc ? ? A SER 72 OG ? ? ? 1_555 I NA . NA ? ? A SER 72 A NA 1008 1_555 ? ? ? ? ? ? ? 2.465 ? metalc4 metalc ? ? A ARG 73 O ? ? ? 1_555 I NA . NA ? ? A ARG 73 A NA 1008 1_555 ? ? ? ? ? ? ? 2.472 ? metalc5 metalc ? ? I NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 1008 A HOH 1101 1_555 ? ? ? ? ? ? ? 2.514 ? metalc6 metalc ? ? I NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 1008 A HOH 1126 1_555 ? ? ? ? ? ? ? 2.558 ? metalc7 metalc ? ? A ASP 18 OD1 ? ? ? 1_555 D 2T8 . IR A ? A ASP 18 A 2T8 1003 1_555 ? ? ? ? ? ? ? 2.312 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45 A 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53 A 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 A 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE 2T8 A 1001' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE 2T8 A 1002' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE 2T8 A 1003' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE 2T8 A 1004' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE 2T8 A 1005' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CL A 1006' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CL A 1007' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 1008' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 LYS A 1 ? LYS A 1 . ? 7_554 ? 2 AC1 8 GLU A 7 ? GLU A 7 . ? 7_554 ? 3 AC1 8 ALA A 11 ? ALA A 11 . ? 1_555 ? 4 AC1 8 ARG A 14 ? ARG A 14 . ? 1_555 ? 5 AC1 8 HIS A 15 ? HIS A 15 . ? 1_555 ? 6 AC1 8 ASP A 87 ? ASP A 87 . ? 1_555 ? 7 AC1 8 ILE A 88 ? ILE A 88 . ? 1_555 ? 8 AC1 8 THR A 89 ? THR A 89 . ? 1_555 ? 9 AC2 7 SER A 24 ? SER A 24 . ? 1_555 ? 10 AC2 7 ASN A 27 ? ASN A 27 . ? 1_555 ? 11 AC2 7 LYS A 33 ? LYS A 33 . ? 4_445 ? 12 AC2 7 PHE A 34 ? PHE A 34 . ? 4_445 ? 13 AC2 7 VAL A 120 ? VAL A 120 . ? 1_555 ? 14 AC2 7 GLN A 121 ? GLN A 121 . ? 1_555 ? 15 AC2 7 HOH J . ? HOH A 1119 . ? 1_555 ? 16 AC3 5 LYS A 13 ? LYS A 13 . ? 1_555 ? 17 AC3 5 ASP A 18 ? ASP A 18 . ? 1_555 ? 18 AC3 5 ASN A 19 ? ASN A 19 . ? 1_555 ? 19 AC3 5 LEU A 25 ? LEU A 25 . ? 1_555 ? 20 AC3 5 ILE A 124 ? ILE A 124 . ? 1_555 ? 21 AC4 5 ASN A 59 ? ASN A 59 . ? 1_555 ? 22 AC4 5 TRP A 62 ? TRP A 62 . ? 1_555 ? 23 AC4 5 TRP A 63 ? TRP A 63 . ? 1_555 ? 24 AC4 5 ALA A 107 ? ALA A 107 . ? 1_555 ? 25 AC4 5 HOH J . ? HOH A 1177 . ? 1_555 ? 26 AC5 5 ASN A 46 ? ASN A 46 . ? 1_555 ? 27 AC5 5 THR A 47 ? THR A 47 . ? 1_555 ? 28 AC5 5 ASP A 48 ? ASP A 48 . ? 1_555 ? 29 AC5 5 ARG A 125 ? ARG A 125 . ? 3_455 ? 30 AC5 5 GLY A 126 ? GLY A 126 . ? 3_455 ? 31 AC6 2 TYR A 23 ? TYR A 23 . ? 1_555 ? 32 AC6 2 ASN A 113 ? ASN A 113 . ? 4_445 ? 33 AC7 5 ASN A 65 ? ASN A 65 . ? 1_555 ? 34 AC7 5 GLY A 67 ? GLY A 67 . ? 1_555 ? 35 AC7 5 ARG A 68 ? ARG A 68 . ? 1_555 ? 36 AC7 5 THR A 69 ? THR A 69 . ? 1_555 ? 37 AC7 5 HOH J . ? HOH A 1126 . ? 1_555 ? 38 AC8 6 SER A 60 ? SER A 60 . ? 1_555 ? 39 AC8 6 CYS A 64 ? CYS A 64 . ? 1_555 ? 40 AC8 6 SER A 72 ? SER A 72 . ? 1_555 ? 41 AC8 6 ARG A 73 ? ARG A 73 . ? 1_555 ? 42 AC8 6 HOH J . ? HOH A 1101 . ? 1_555 ? 43 AC8 6 HOH J . ? HOH A 1126 . ? 1_555 ? # _database_PDB_matrix.entry_id 4NHT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NHT _atom_sites.fract_transf_matrix[1][1] 0.012725 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012725 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026941 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL IR N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 1104 ? J HOH . 2 1 A HOH 1106 ? J HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 60 ? A SER 60 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? A CYS 64 ? A CYS 64 ? 1_555 90.7 ? 2 O ? A SER 60 ? A SER 60 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 OG ? A SER 72 ? A SER 72 ? 1_555 87.2 ? 3 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 OG ? A SER 72 ? A SER 72 ? 1_555 168.0 ? 4 O ? A SER 60 ? A SER 60 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 91.7 ? 5 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 91.7 ? 6 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 100.1 ? 7 O ? A SER 60 ? A SER 60 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1101 ? 1_555 170.8 ? 8 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1101 ? 1_555 97.9 ? 9 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1101 ? 1_555 85.0 ? 10 O ? A ARG 73 ? A ARG 73 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1101 ? 1_555 84.9 ? 11 O ? A SER 60 ? A SER 60 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1126 ? 1_555 102.3 ? 12 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1126 ? 1_555 90.4 ? 13 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1126 ? 1_555 78.5 ? 14 O ? A ARG 73 ? A ARG 73 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1126 ? 1_555 165.8 ? 15 O ? J HOH . ? A HOH 1101 ? 1_555 NA ? I NA . ? A NA 1008 ? 1_555 O ? J HOH . ? A HOH 1126 ? 1_555 80.9 ? 16 OD1 ? A ASP 18 ? A ASP 18 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL2 A D 2T8 . ? A 2T8 1003 ? 1_555 78.5 ? 17 OD1 ? A ASP 18 ? A ASP 18 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL4 A D 2T8 . ? A 2T8 1003 ? 1_555 81.5 ? 18 CL2 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL4 A D 2T8 . ? A 2T8 1003 ? 1_555 89.5 ? 19 OD1 ? A ASP 18 ? A ASP 18 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL3 A D 2T8 . ? A 2T8 1003 ? 1_555 104.2 ? 20 CL2 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL3 A D 2T8 . ? A 2T8 1003 ? 1_555 177.2 ? 21 CL4 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL3 A D 2T8 . ? A 2T8 1003 ? 1_555 90.0 ? 22 OD1 ? A ASP 18 ? A ASP 18 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL1 A D 2T8 . ? A 2T8 1003 ? 1_555 96.8 ? 23 CL2 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL1 A D 2T8 . ? A 2T8 1003 ? 1_555 87.3 ? 24 CL4 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL1 A D 2T8 . ? A 2T8 1003 ? 1_555 176.7 ? 25 CL3 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 CL1 A D 2T8 . ? A 2T8 1003 ? 1_555 93.2 ? 26 OD1 ? A ASP 18 ? A ASP 18 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 O2 A D 2T8 . ? A 2T8 1003 ? 1_555 165.8 ? 27 CL2 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 O2 A D 2T8 . ? A 2T8 1003 ? 1_555 89.5 ? 28 CL4 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 O2 A D 2T8 . ? A 2T8 1003 ? 1_555 90.9 ? 29 CL3 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 O2 A D 2T8 . ? A 2T8 1003 ? 1_555 87.7 ? 30 CL1 A D 2T8 . ? A 2T8 1003 ? 1_555 IR A D 2T8 . ? A 2T8 1003 ? 1_555 O2 A D 2T8 . ? A 2T8 1003 ? 1_555 90.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2015-06-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_entry_details.nonpolymer_details ;THIS ENTRY REPORTS THE CRYSTAL STRUCTURE OF THE ADDUCT RESULTING FROM THE REACTION OF [IR(CL)5CO]2- WITH HEN EGG WHITE LYSOZIME (HEWL). THE STARTING METAL COMPLEX EXCHANGE A CL- ION WITH A WATER MOLECULE. THE DATA SUGGEST THAT THE ACTUAL MOLECULE BOUND TO HEWL IS [IRCL4CO(H2O)]-1. THIS EXCHANGE ALSO AGREES WITH PREVIOUS EXPERIMENTAL RESULTS OBTAINED USING THE SAME MOLECULE. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.entry_id 4NHT # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 2T8 _pdbx_validate_close_contact.auth_seq_id_1 1002 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1119 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 48 ? ? CG A ASP 48 ? ? OD1 A ASP 48 ? ? 123.91 118.30 5.61 0.90 N 2 1 NE A ARG 68 ? ? CZ A ARG 68 ? ? NH1 A ARG 68 ? ? 117.29 120.30 -3.01 0.50 N 3 1 NE A ARG 68 ? ? CZ A ARG 68 ? ? NH2 A ARG 68 ? ? 123.46 120.30 3.16 0.50 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 2T8 1001 ? O2 ? B 2T8 1 O2 2 1 N 1 A 2T8 1003 ? O ? D 2T8 1 O # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'carbonyl(tetrachloro)oxidoiridium' 2T8 3 'CHLORIDE ION' CL 4 'SODIUM ION' NA 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2T8 1 1001 1001 2T8 IRC A . C 2 2T8 1 1002 2001 2T8 IRC A . D 2 2T8 1 1003 3001 2T8 IRC A . E 2 2T8 1 1004 4001 2T8 IRC A . F 2 2T8 1 1005 5001 2T8 IRC A . G 3 CL 1 1006 1 CL CL A . H 3 CL 1 1007 2 CL CL A . I 4 NA 1 1008 10 NA NA A . J 5 HOH 1 1101 4 HOH HOH A . J 5 HOH 2 1102 6 HOH HOH A . J 5 HOH 3 1103 7 HOH HOH A . J 5 HOH 4 1104 8 HOH HOH A . J 5 HOH 5 1105 11 HOH HOH A . J 5 HOH 6 1106 12 HOH HOH A . J 5 HOH 7 1107 14 HOH HOH A . J 5 HOH 8 1108 26 HOH HOH A . J 5 HOH 9 1109 27 HOH HOH A . J 5 HOH 10 1110 28 HOH HOH A . J 5 HOH 11 1111 29 HOH HOH A . J 5 HOH 12 1112 30 HOH HOH A . J 5 HOH 13 1113 31 HOH HOH A . J 5 HOH 14 1114 33 HOH HOH A . J 5 HOH 15 1115 34 HOH HOH A . J 5 HOH 16 1116 35 HOH HOH A . J 5 HOH 17 1117 37 HOH HOH A . J 5 HOH 18 1118 38 HOH HOH A . J 5 HOH 19 1119 39 HOH HOH A . J 5 HOH 20 1120 40 HOH HOH A . J 5 HOH 21 1121 42 HOH HOH A . J 5 HOH 22 1122 43 HOH HOH A . J 5 HOH 23 1123 45 HOH HOH A . J 5 HOH 24 1124 46 HOH HOH A . J 5 HOH 25 1125 47 HOH HOH A . J 5 HOH 26 1126 48 HOH HOH A . J 5 HOH 27 1127 49 HOH HOH A . J 5 HOH 28 1128 50 HOH HOH A . J 5 HOH 29 1129 51 HOH HOH A . J 5 HOH 30 1130 52 HOH HOH A . J 5 HOH 31 1131 53 HOH HOH A . J 5 HOH 32 1132 54 HOH HOH A . J 5 HOH 33 1133 56 HOH HOH A . J 5 HOH 34 1134 57 HOH HOH A . J 5 HOH 35 1135 58 HOH HOH A . J 5 HOH 36 1136 59 HOH HOH A . J 5 HOH 37 1137 60 HOH HOH A . J 5 HOH 38 1138 61 HOH HOH A . J 5 HOH 39 1139 62 HOH HOH A . J 5 HOH 40 1140 63 HOH HOH A . J 5 HOH 41 1141 64 HOH HOH A . J 5 HOH 42 1142 65 HOH HOH A . J 5 HOH 43 1143 66 HOH HOH A . J 5 HOH 44 1144 67 HOH HOH A . J 5 HOH 45 1145 68 HOH HOH A . J 5 HOH 46 1146 69 HOH HOH A . J 5 HOH 47 1147 70 HOH HOH A . J 5 HOH 48 1148 71 HOH HOH A . J 5 HOH 49 1149 72 HOH HOH A . J 5 HOH 50 1150 73 HOH HOH A . J 5 HOH 51 1151 74 HOH HOH A . J 5 HOH 52 1152 75 HOH HOH A . J 5 HOH 53 1153 76 HOH HOH A . J 5 HOH 54 1154 77 HOH HOH A . J 5 HOH 55 1155 78 HOH HOH A . J 5 HOH 56 1156 79 HOH HOH A . J 5 HOH 57 1157 80 HOH HOH A . J 5 HOH 58 1158 81 HOH HOH A . J 5 HOH 59 1159 82 HOH HOH A . J 5 HOH 60 1160 83 HOH HOH A . J 5 HOH 61 1161 84 HOH HOH A . J 5 HOH 62 1162 85 HOH HOH A . J 5 HOH 63 1163 86 HOH HOH A . J 5 HOH 64 1164 87 HOH HOH A . J 5 HOH 65 1165 88 HOH HOH A . J 5 HOH 66 1166 89 HOH HOH A . J 5 HOH 67 1167 90 HOH HOH A . J 5 HOH 68 1168 91 HOH HOH A . J 5 HOH 69 1169 92 HOH HOH A . J 5 HOH 70 1170 93 HOH HOH A . J 5 HOH 71 1171 94 HOH HOH A . J 5 HOH 72 1172 95 HOH HOH A . J 5 HOH 73 1173 96 HOH HOH A . J 5 HOH 74 1174 97 HOH HOH A . J 5 HOH 75 1175 98 HOH HOH A . J 5 HOH 76 1176 99 HOH HOH A . J 5 HOH 77 1177 55 HOH HOH A . #