data_4NIM # _entry.id 4NIM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NIM pdb_00004nim 10.2210/pdb4nim/pdb RCSB RCSB083249 ? ? WWPDB D_1000083249 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id SSGCID-BrmeB.00143.c _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4NIM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-11-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dranow, D.M.' 1 'Edwards, T.E.' 2 'Lorimer, D.' 3 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' 4 # _citation.id primary _citation.title 'Crystal Structure of a Short Chain Dehydrogenase from Brucella melitensis' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dranow, D.M.' 1 ? primary 'Edwards, T.E.' 2 ? primary 'Lorimer, D.' 3 ? # _cell.length_a 118.210 _cell.length_b 118.210 _cell.length_c 85.180 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4NIM _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.entry_id 4NIM _symmetry.Int_Tables_number 98 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Versicolorin reductase' 29990.086 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 167 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGGQLKGKIAVITGSTQGLGAATARLFAERGAQGLVICGRSAEKGRAQAAGLEELGAKAVFVQVDLENVEDC RRIVAEADRAFGRLDILVNAAGLTDRGTILDTSPELFDRLFAVNTRAPFFLIQEAIKLFRRDRVEGAIVNVSSMSSMGGQ PFIAAYCASKGALDTLTRNVAYSVLRNRIRVNSLNIGWMASDGEDRIQREYHGAPANWLEEAVKTQPFGRLLDPAKVARA IAFLASEESGLMTGAIVNFDQSVWGAYDGSPHPEKPL ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGGQLKGKIAVITGSTQGLGAATARLFAERGAQGLVICGRSAEKGRAQAAGLEELGAKAVFVQVDLENVEDC RRIVAEADRAFGRLDILVNAAGLTDRGTILDTSPELFDRLFAVNTRAPFFLIQEAIKLFRRDRVEGAIVNVSSMSSMGGQ PFIAAYCASKGALDTLTRNVAYSVLRNRIRVNSLNIGWMASDGEDRIQREYHGAPANWLEEAVKTQPFGRLLDPAKVARA IAFLASEESGLMTGAIVNFDQSVWGAYDGSPHPEKPL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier SSGCID-BrmeB.00143.c # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 GLY n 1 12 GLN n 1 13 LEU n 1 14 LYS n 1 15 GLY n 1 16 LYS n 1 17 ILE n 1 18 ALA n 1 19 VAL n 1 20 ILE n 1 21 THR n 1 22 GLY n 1 23 SER n 1 24 THR n 1 25 GLN n 1 26 GLY n 1 27 LEU n 1 28 GLY n 1 29 ALA n 1 30 ALA n 1 31 THR n 1 32 ALA n 1 33 ARG n 1 34 LEU n 1 35 PHE n 1 36 ALA n 1 37 GLU n 1 38 ARG n 1 39 GLY n 1 40 ALA n 1 41 GLN n 1 42 GLY n 1 43 LEU n 1 44 VAL n 1 45 ILE n 1 46 CYS n 1 47 GLY n 1 48 ARG n 1 49 SER n 1 50 ALA n 1 51 GLU n 1 52 LYS n 1 53 GLY n 1 54 ARG n 1 55 ALA n 1 56 GLN n 1 57 ALA n 1 58 ALA n 1 59 GLY n 1 60 LEU n 1 61 GLU n 1 62 GLU n 1 63 LEU n 1 64 GLY n 1 65 ALA n 1 66 LYS n 1 67 ALA n 1 68 VAL n 1 69 PHE n 1 70 VAL n 1 71 GLN n 1 72 VAL n 1 73 ASP n 1 74 LEU n 1 75 GLU n 1 76 ASN n 1 77 VAL n 1 78 GLU n 1 79 ASP n 1 80 CYS n 1 81 ARG n 1 82 ARG n 1 83 ILE n 1 84 VAL n 1 85 ALA n 1 86 GLU n 1 87 ALA n 1 88 ASP n 1 89 ARG n 1 90 ALA n 1 91 PHE n 1 92 GLY n 1 93 ARG n 1 94 LEU n 1 95 ASP n 1 96 ILE n 1 97 LEU n 1 98 VAL n 1 99 ASN n 1 100 ALA n 1 101 ALA n 1 102 GLY n 1 103 LEU n 1 104 THR n 1 105 ASP n 1 106 ARG n 1 107 GLY n 1 108 THR n 1 109 ILE n 1 110 LEU n 1 111 ASP n 1 112 THR n 1 113 SER n 1 114 PRO n 1 115 GLU n 1 116 LEU n 1 117 PHE n 1 118 ASP n 1 119 ARG n 1 120 LEU n 1 121 PHE n 1 122 ALA n 1 123 VAL n 1 124 ASN n 1 125 THR n 1 126 ARG n 1 127 ALA n 1 128 PRO n 1 129 PHE n 1 130 PHE n 1 131 LEU n 1 132 ILE n 1 133 GLN n 1 134 GLU n 1 135 ALA n 1 136 ILE n 1 137 LYS n 1 138 LEU n 1 139 PHE n 1 140 ARG n 1 141 ARG n 1 142 ASP n 1 143 ARG n 1 144 VAL n 1 145 GLU n 1 146 GLY n 1 147 ALA n 1 148 ILE n 1 149 VAL n 1 150 ASN n 1 151 VAL n 1 152 SER n 1 153 SER n 1 154 MET n 1 155 SER n 1 156 SER n 1 157 MET n 1 158 GLY n 1 159 GLY n 1 160 GLN n 1 161 PRO n 1 162 PHE n 1 163 ILE n 1 164 ALA n 1 165 ALA n 1 166 TYR n 1 167 CYS n 1 168 ALA n 1 169 SER n 1 170 LYS n 1 171 GLY n 1 172 ALA n 1 173 LEU n 1 174 ASP n 1 175 THR n 1 176 LEU n 1 177 THR n 1 178 ARG n 1 179 ASN n 1 180 VAL n 1 181 ALA n 1 182 TYR n 1 183 SER n 1 184 VAL n 1 185 LEU n 1 186 ARG n 1 187 ASN n 1 188 ARG n 1 189 ILE n 1 190 ARG n 1 191 VAL n 1 192 ASN n 1 193 SER n 1 194 LEU n 1 195 ASN n 1 196 ILE n 1 197 GLY n 1 198 TRP n 1 199 MET n 1 200 ALA n 1 201 SER n 1 202 ASP n 1 203 GLY n 1 204 GLU n 1 205 ASP n 1 206 ARG n 1 207 ILE n 1 208 GLN n 1 209 ARG n 1 210 GLU n 1 211 TYR n 1 212 HIS n 1 213 GLY n 1 214 ALA n 1 215 PRO n 1 216 ALA n 1 217 ASN n 1 218 TRP n 1 219 LEU n 1 220 GLU n 1 221 GLU n 1 222 ALA n 1 223 VAL n 1 224 LYS n 1 225 THR n 1 226 GLN n 1 227 PRO n 1 228 PHE n 1 229 GLY n 1 230 ARG n 1 231 LEU n 1 232 LEU n 1 233 ASP n 1 234 PRO n 1 235 ALA n 1 236 LYS n 1 237 VAL n 1 238 ALA n 1 239 ARG n 1 240 ALA n 1 241 ILE n 1 242 ALA n 1 243 PHE n 1 244 LEU n 1 245 ALA n 1 246 SER n 1 247 GLU n 1 248 GLU n 1 249 SER n 1 250 GLY n 1 251 LEU n 1 252 MET n 1 253 THR n 1 254 GLY n 1 255 ALA n 1 256 ILE n 1 257 VAL n 1 258 ASN n 1 259 PHE n 1 260 ASP n 1 261 GLN n 1 262 SER n 1 263 VAL n 1 264 TRP n 1 265 GLY n 1 266 ALA n 1 267 TYR n 1 268 ASP n 1 269 GLY n 1 270 SER n 1 271 PRO n 1 272 HIS n 1 273 PRO n 1 274 GLU n 1 275 LYS n 1 276 PRO n 1 277 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BMEA_A1386 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 23457' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Brucella melitensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 546272 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C0RJU5_BRUMB _struct_ref.pdbx_db_accession C0RJU5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGGQLKGKIAVITGSTQGLGAATARLFAERGAQGLVICGRSAEKGRAQAAGLEELGAKAVFVQVDLENVEDCRRIVAEAD RAFGRLDILVNAAGLTDRGTILDTSPELFDRLFAVNTRAPFFLIQEAIKLFRRDRVEGAIVNVSSMSSMGGQPFIAAYCA SKGALDTLTRNVAYSVLRNRIRVNSLNIGWMASDGEDRIQREYHGAPANWLEEAVKTQPFGRLLDPAKVARAIAFLASEE SGLMTGAIVNFDQSVWGAYDGSPHPEKPL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NIM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 277 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C0RJU5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 269 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NIM MET A 1 ? UNP C0RJU5 ? ? 'expression tag' -7 1 1 4NIM ALA A 2 ? UNP C0RJU5 ? ? 'expression tag' -6 2 1 4NIM HIS A 3 ? UNP C0RJU5 ? ? 'expression tag' -5 3 1 4NIM HIS A 4 ? UNP C0RJU5 ? ? 'expression tag' -4 4 1 4NIM HIS A 5 ? UNP C0RJU5 ? ? 'expression tag' -3 5 1 4NIM HIS A 6 ? UNP C0RJU5 ? ? 'expression tag' -2 6 1 4NIM HIS A 7 ? UNP C0RJU5 ? ? 'expression tag' -1 7 1 4NIM HIS A 8 ? UNP C0RJU5 ? ? 'expression tag' 0 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4NIM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;JCSG+(d3): 50% PEG-200, 100mM Sodium phosphate dibasic/ potassium phosphate monobasic, pH 6.2, 200mM NaCl, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-10-16 _diffrn_detector.details 'Beryllium Lenses' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Diamond [111]' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F # _reflns.entry_id 4NIM _reflns.d_resolution_high 1.800 _reflns.number_obs 27974 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_netI_over_sigmaI 27.640 _reflns.percent_possible_obs 99.200 _reflns.B_iso_Wilson_estimate 27.611 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.number_all 28196 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 9.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.800 1.850 19456 ? 2047 0.487 4.950 ? ? ? ? ? 99.700 1 1 1.850 1.900 18706 ? 1970 0.393 6.090 ? ? ? ? ? 99.600 2 1 1.900 1.950 18625 ? 1967 0.321 7.430 ? ? ? ? ? 99.800 3 1 1.950 2.010 17700 ? 1878 0.242 9.590 ? ? ? ? ? 99.900 4 1 2.010 2.080 17433 ? 1846 0.199 11.640 ? ? ? ? ? 99.700 5 1 2.080 2.150 16751 ? 1771 0.161 14.000 ? ? ? ? ? 99.600 6 1 2.150 2.230 16172 ? 1725 0.124 17.740 ? ? ? ? ? 99.800 7 1 2.230 2.320 15231 ? 1627 0.105 20.540 ? ? ? ? ? 99.400 8 1 2.320 2.430 14959 ? 1603 0.089 23.660 ? ? ? ? ? 99.800 9 1 2.430 2.550 14122 ? 1511 0.083 25.480 ? ? ? ? ? 99.300 10 1 2.550 2.680 13543 ? 1452 0.068 29.730 ? ? ? ? ? 99.300 11 1 2.680 2.850 12730 ? 1365 0.057 34.290 ? ? ? ? ? 98.800 12 1 2.850 3.040 11888 ? 1291 0.047 41.700 ? ? ? ? ? 98.900 13 1 3.040 3.290 10881 ? 1189 0.039 48.230 ? ? ? ? ? 98.900 14 1 3.290 3.600 9879 ? 1109 0.032 57.970 ? ? ? ? ? 98.600 15 1 3.600 4.020 9093 ? 1008 0.027 67.450 ? ? ? ? ? 98.500 16 1 4.020 4.650 8326 ? 899 0.024 75.610 ? ? ? ? ? 98.000 17 1 4.650 5.690 7004 ? 759 0.024 74.980 ? ? ? ? ? 97.300 18 1 5.690 8.050 5473 ? 604 0.023 74.240 ? ? ? ? ? 97.100 19 1 8.050 ? 2851 ? 353 0.020 81.230 ? ? ? ? ? 94.100 20 1 # _refine.entry_id 4NIM _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2200 _refine.ls_number_reflns_obs 27974 _refine.ls_number_reflns_all 29383 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.1558 _refine.ls_R_factor_obs 0.1558 _refine.ls_R_factor_R_work 0.1542 _refine.ls_wR_factor_R_work 0.1375 _refine.ls_R_factor_R_free 0.1864 _refine.ls_wR_factor_R_free 0.1655 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1409 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.359 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.4700 _refine.aniso_B[2][2] -1.4700 _refine.aniso_B[3][3] 2.9300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9700 _refine.correlation_coeff_Fo_to_Fc_free 0.9580 _refine.overall_SU_R_Cruickshank_DPI 0.0920 _refine.overall_SU_R_free 0.0933 _refine.pdbx_overall_ESU_R 0.0920 _refine.pdbx_overall_ESU_R_Free 0.0930 _refine.overall_SU_ML 0.0740 _refine.overall_SU_B 4.9060 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1YBV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8538 _refine.B_iso_max 60.780 _refine.B_iso_min 6.230 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1763 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 167 _refine_hist.number_atoms_total 1938 _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1831 0.014 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1785 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2482 1.509 1.963 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4063 0.826 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 248 6.435 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 77 34.455 22.727 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 290 12.808 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19 16.596 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 287 0.094 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2142 0.009 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 435 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 971 0.965 1.286 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 970 0.965 1.286 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1214 1.552 1.921 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8000 _refine_ls_shell.d_res_low 1.8470 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.7600 _refine_ls_shell.number_reflns_R_work 1957 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2460 _refine_ls_shell.R_factor_R_free 0.2490 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2047 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NIM _struct.title 'Crystal Structure of a Short Chain Dehydrogenase from Brucella melitensis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NIM _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;reductase, short chain dehydrogenases, OXIDOREDUCTASE, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 25 ? ARG A 38 ? GLN A 17 ARG A 30 1 ? 14 HELX_P HELX_P2 2 SER A 49 ? LEU A 63 ? SER A 41 LEU A 55 1 ? 15 HELX_P HELX_P3 3 ASN A 76 ? GLY A 92 ? ASN A 68 GLY A 84 1 ? 17 HELX_P HELX_P4 4 SER A 113 ? THR A 125 ? SER A 105 THR A 117 1 ? 13 HELX_P HELX_P5 5 THR A 125 ? ARG A 143 ? THR A 117 ARG A 135 1 ? 19 HELX_P HELX_P6 6 SER A 155 ? GLY A 158 ? SER A 147 GLY A 150 5 ? 4 HELX_P HELX_P7 7 GLN A 160 ? PHE A 162 ? GLN A 152 PHE A 154 5 ? 3 HELX_P HELX_P8 8 ILE A 163 ? VAL A 184 ? ILE A 155 VAL A 176 1 ? 22 HELX_P HELX_P9 9 LEU A 185 ? ARG A 188 ? LEU A 177 ARG A 180 5 ? 4 HELX_P HELX_P10 10 ASP A 233 ? SER A 246 ? ASP A 225 SER A 238 1 ? 14 HELX_P HELX_P11 11 GLU A 247 ? GLY A 250 ? GLU A 239 GLY A 242 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 228 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 220 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 229 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 221 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 18.98 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 66 ? GLN A 71 ? LYS A 58 GLN A 63 A 2 GLY A 42 ? GLY A 47 ? GLY A 34 GLY A 39 A 3 ILE A 17 ? ILE A 20 ? ILE A 9 ILE A 12 A 4 ILE A 96 ? ASN A 99 ? ILE A 88 ASN A 91 A 5 ALA A 147 ? SER A 153 ? ALA A 139 SER A 145 A 6 ARG A 190 ? ILE A 196 ? ARG A 182 ILE A 188 A 7 ILE A 256 ? PHE A 259 ? ILE A 248 PHE A 251 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 68 ? O VAL A 60 N ILE A 45 ? N ILE A 37 A 2 3 O VAL A 44 ? O VAL A 36 N ALA A 18 ? N ALA A 10 A 3 4 N VAL A 19 ? N VAL A 11 O VAL A 98 ? O VAL A 90 A 4 5 N ASN A 99 ? N ASN A 91 O VAL A 149 ? O VAL A 141 A 5 6 N ASN A 150 ? N ASN A 142 O ASN A 192 ? O ASN A 184 A 6 7 N ASN A 195 ? N ASN A 187 O VAL A 257 ? O VAL A 249 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 301 ? 3 'BINDING SITE FOR RESIDUE EDO A 301' AC2 Software A EDO 302 ? 4 'BINDING SITE FOR RESIDUE EDO A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 156 ? SER A 148 . ? 1_555 ? 2 AC1 3 ASP A 174 ? ASP A 166 . ? 1_555 ? 3 AC1 3 HOH D . ? HOH A 487 . ? 1_555 ? 4 AC2 4 ARG A 143 ? ARG A 135 . ? 1_555 ? 5 AC2 4 ASN A 187 ? ASN A 179 . ? 1_555 ? 6 AC2 4 ARG A 188 ? ARG A 180 . ? 1_555 ? 7 AC2 4 HOH D . ? HOH A 549 . ? 1_555 ? # _atom_sites.entry_id 4NIM _atom_sites.fract_transf_matrix[1][1] 0.008460 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008460 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011740 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -7 ? ? ? A . n A 1 2 ALA 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 HIS 8 0 ? ? ? A . n A 1 9 MET 9 1 ? ? ? A . n A 1 10 GLY 10 2 ? ? ? A . n A 1 11 GLY 11 3 3 GLY GLY A . n A 1 12 GLN 12 4 4 GLN GLN A . n A 1 13 LEU 13 5 5 LEU LEU A . n A 1 14 LYS 14 6 6 LYS LYS A . n A 1 15 GLY 15 7 7 GLY GLY A . n A 1 16 LYS 16 8 8 LYS LYS A . n A 1 17 ILE 17 9 9 ILE ILE A . n A 1 18 ALA 18 10 10 ALA ALA A . n A 1 19 VAL 19 11 11 VAL VAL A . n A 1 20 ILE 20 12 12 ILE ILE A . n A 1 21 THR 21 13 13 THR THR A . n A 1 22 GLY 22 14 14 GLY GLY A . n A 1 23 SER 23 15 15 SER SER A . n A 1 24 THR 24 16 16 THR THR A . n A 1 25 GLN 25 17 17 GLN GLN A . n A 1 26 GLY 26 18 18 GLY GLY A . n A 1 27 LEU 27 19 19 LEU LEU A . n A 1 28 GLY 28 20 20 GLY GLY A . n A 1 29 ALA 29 21 21 ALA ALA A . n A 1 30 ALA 30 22 22 ALA ALA A . n A 1 31 THR 31 23 23 THR THR A . n A 1 32 ALA 32 24 24 ALA ALA A . n A 1 33 ARG 33 25 25 ARG ARG A . n A 1 34 LEU 34 26 26 LEU LEU A . n A 1 35 PHE 35 27 27 PHE PHE A . n A 1 36 ALA 36 28 28 ALA ALA A . n A 1 37 GLU 37 29 29 GLU GLU A . n A 1 38 ARG 38 30 30 ARG ARG A . n A 1 39 GLY 39 31 31 GLY GLY A . n A 1 40 ALA 40 32 32 ALA ALA A . n A 1 41 GLN 41 33 33 GLN GLN A . n A 1 42 GLY 42 34 34 GLY GLY A . n A 1 43 LEU 43 35 35 LEU LEU A . n A 1 44 VAL 44 36 36 VAL VAL A . n A 1 45 ILE 45 37 37 ILE ILE A . n A 1 46 CYS 46 38 38 CYS CYS A . n A 1 47 GLY 47 39 39 GLY GLY A . n A 1 48 ARG 48 40 40 ARG ARG A . n A 1 49 SER 49 41 41 SER SER A . n A 1 50 ALA 50 42 42 ALA ALA A . n A 1 51 GLU 51 43 43 GLU GLU A . n A 1 52 LYS 52 44 44 LYS LYS A . n A 1 53 GLY 53 45 45 GLY GLY A . n A 1 54 ARG 54 46 46 ARG ARG A . n A 1 55 ALA 55 47 47 ALA ALA A . n A 1 56 GLN 56 48 48 GLN GLN A . n A 1 57 ALA 57 49 49 ALA ALA A . n A 1 58 ALA 58 50 50 ALA ALA A . n A 1 59 GLY 59 51 51 GLY GLY A . n A 1 60 LEU 60 52 52 LEU LEU A . n A 1 61 GLU 61 53 53 GLU GLU A . n A 1 62 GLU 62 54 54 GLU GLU A . n A 1 63 LEU 63 55 55 LEU LEU A . n A 1 64 GLY 64 56 56 GLY GLY A . n A 1 65 ALA 65 57 57 ALA ALA A . n A 1 66 LYS 66 58 58 LYS LYS A . n A 1 67 ALA 67 59 59 ALA ALA A . n A 1 68 VAL 68 60 60 VAL VAL A . n A 1 69 PHE 69 61 61 PHE PHE A . n A 1 70 VAL 70 62 62 VAL VAL A . n A 1 71 GLN 71 63 63 GLN GLN A . n A 1 72 VAL 72 64 64 VAL VAL A . n A 1 73 ASP 73 65 65 ASP ASP A . n A 1 74 LEU 74 66 66 LEU LEU A . n A 1 75 GLU 75 67 67 GLU GLU A . n A 1 76 ASN 76 68 68 ASN ASN A . n A 1 77 VAL 77 69 69 VAL VAL A . n A 1 78 GLU 78 70 70 GLU GLU A . n A 1 79 ASP 79 71 71 ASP ASP A . n A 1 80 CYS 80 72 72 CYS CYS A . n A 1 81 ARG 81 73 73 ARG ARG A . n A 1 82 ARG 82 74 74 ARG ARG A . n A 1 83 ILE 83 75 75 ILE ILE A . n A 1 84 VAL 84 76 76 VAL VAL A . n A 1 85 ALA 85 77 77 ALA ALA A . n A 1 86 GLU 86 78 78 GLU GLU A . n A 1 87 ALA 87 79 79 ALA ALA A . n A 1 88 ASP 88 80 80 ASP ASP A . n A 1 89 ARG 89 81 81 ARG ARG A . n A 1 90 ALA 90 82 82 ALA ALA A . n A 1 91 PHE 91 83 83 PHE PHE A . n A 1 92 GLY 92 84 84 GLY GLY A . n A 1 93 ARG 93 85 85 ARG ARG A . n A 1 94 LEU 94 86 86 LEU LEU A . n A 1 95 ASP 95 87 87 ASP ASP A . n A 1 96 ILE 96 88 88 ILE ILE A . n A 1 97 LEU 97 89 89 LEU LEU A . n A 1 98 VAL 98 90 90 VAL VAL A . n A 1 99 ASN 99 91 91 ASN ASN A . n A 1 100 ALA 100 92 92 ALA ALA A . n A 1 101 ALA 101 93 93 ALA ALA A . n A 1 102 GLY 102 94 94 GLY GLY A . n A 1 103 LEU 103 95 95 LEU LEU A . n A 1 104 THR 104 96 96 THR THR A . n A 1 105 ASP 105 97 97 ASP ASP A . n A 1 106 ARG 106 98 98 ARG ARG A . n A 1 107 GLY 107 99 99 GLY GLY A . n A 1 108 THR 108 100 100 THR THR A . n A 1 109 ILE 109 101 101 ILE ILE A . n A 1 110 LEU 110 102 102 LEU LEU A . n A 1 111 ASP 111 103 103 ASP ASP A . n A 1 112 THR 112 104 104 THR THR A . n A 1 113 SER 113 105 105 SER SER A . n A 1 114 PRO 114 106 106 PRO PRO A . n A 1 115 GLU 115 107 107 GLU GLU A . n A 1 116 LEU 116 108 108 LEU LEU A . n A 1 117 PHE 117 109 109 PHE PHE A . n A 1 118 ASP 118 110 110 ASP ASP A . n A 1 119 ARG 119 111 111 ARG ARG A . n A 1 120 LEU 120 112 112 LEU LEU A . n A 1 121 PHE 121 113 113 PHE PHE A . n A 1 122 ALA 122 114 114 ALA ALA A . n A 1 123 VAL 123 115 115 VAL VAL A . n A 1 124 ASN 124 116 116 ASN ASN A . n A 1 125 THR 125 117 117 THR THR A . n A 1 126 ARG 126 118 118 ARG ARG A . n A 1 127 ALA 127 119 119 ALA ALA A . n A 1 128 PRO 128 120 120 PRO PRO A . n A 1 129 PHE 129 121 121 PHE PHE A . n A 1 130 PHE 130 122 122 PHE PHE A . n A 1 131 LEU 131 123 123 LEU LEU A . n A 1 132 ILE 132 124 124 ILE ILE A . n A 1 133 GLN 133 125 125 GLN GLN A . n A 1 134 GLU 134 126 126 GLU GLU A . n A 1 135 ALA 135 127 127 ALA ALA A . n A 1 136 ILE 136 128 128 ILE ILE A . n A 1 137 LYS 137 129 129 LYS LYS A . n A 1 138 LEU 138 130 130 LEU LEU A . n A 1 139 PHE 139 131 131 PHE PHE A . n A 1 140 ARG 140 132 132 ARG ARG A . n A 1 141 ARG 141 133 133 ARG ARG A . n A 1 142 ASP 142 134 134 ASP ASP A . n A 1 143 ARG 143 135 135 ARG ARG A . n A 1 144 VAL 144 136 136 VAL VAL A . n A 1 145 GLU 145 137 137 GLU GLU A . n A 1 146 GLY 146 138 138 GLY GLY A . n A 1 147 ALA 147 139 139 ALA ALA A . n A 1 148 ILE 148 140 140 ILE ILE A . n A 1 149 VAL 149 141 141 VAL VAL A . n A 1 150 ASN 150 142 142 ASN ASN A . n A 1 151 VAL 151 143 143 VAL VAL A . n A 1 152 SER 152 144 144 SER SER A . n A 1 153 SER 153 145 145 SER SER A . n A 1 154 MET 154 146 146 MET MET A . n A 1 155 SER 155 147 147 SER SER A . n A 1 156 SER 156 148 148 SER SER A . n A 1 157 MET 157 149 149 MET MET A . n A 1 158 GLY 158 150 150 GLY GLY A . n A 1 159 GLY 159 151 151 GLY GLY A . n A 1 160 GLN 160 152 152 GLN GLN A . n A 1 161 PRO 161 153 153 PRO PRO A . n A 1 162 PHE 162 154 154 PHE PHE A . n A 1 163 ILE 163 155 155 ILE ILE A . n A 1 164 ALA 164 156 156 ALA ALA A . n A 1 165 ALA 165 157 157 ALA ALA A . n A 1 166 TYR 166 158 158 TYR TYR A . n A 1 167 CYS 167 159 159 CYS CYS A . n A 1 168 ALA 168 160 160 ALA ALA A . n A 1 169 SER 169 161 161 SER SER A . n A 1 170 LYS 170 162 162 LYS LYS A . n A 1 171 GLY 171 163 163 GLY GLY A . n A 1 172 ALA 172 164 164 ALA ALA A . n A 1 173 LEU 173 165 165 LEU LEU A . n A 1 174 ASP 174 166 166 ASP ASP A . n A 1 175 THR 175 167 167 THR THR A . n A 1 176 LEU 176 168 168 LEU LEU A . n A 1 177 THR 177 169 169 THR THR A . n A 1 178 ARG 178 170 170 ARG ARG A . n A 1 179 ASN 179 171 171 ASN ASN A . n A 1 180 VAL 180 172 172 VAL VAL A . n A 1 181 ALA 181 173 173 ALA ALA A . n A 1 182 TYR 182 174 174 TYR TYR A . n A 1 183 SER 183 175 175 SER SER A . n A 1 184 VAL 184 176 176 VAL VAL A . n A 1 185 LEU 185 177 177 LEU LEU A . n A 1 186 ARG 186 178 178 ARG ARG A . n A 1 187 ASN 187 179 179 ASN ASN A . n A 1 188 ARG 188 180 180 ARG ARG A . n A 1 189 ILE 189 181 181 ILE ILE A . n A 1 190 ARG 190 182 182 ARG ARG A . n A 1 191 VAL 191 183 183 VAL VAL A . n A 1 192 ASN 192 184 184 ASN ASN A . n A 1 193 SER 193 185 185 SER SER A . n A 1 194 LEU 194 186 186 LEU LEU A . n A 1 195 ASN 195 187 187 ASN ASN A . n A 1 196 ILE 196 188 188 ILE ILE A . n A 1 197 GLY 197 189 189 GLY GLY A . n A 1 198 TRP 198 190 190 TRP TRP A . n A 1 199 MET 199 191 191 MET MET A . n A 1 200 ALA 200 192 192 ALA ALA A . n A 1 201 SER 201 193 ? ? ? A . n A 1 202 ASP 202 194 ? ? ? A . n A 1 203 GLY 203 195 ? ? ? A . n A 1 204 GLU 204 196 ? ? ? A . n A 1 205 ASP 205 197 ? ? ? A . n A 1 206 ARG 206 198 ? ? ? A . n A 1 207 ILE 207 199 ? ? ? A . n A 1 208 GLN 208 200 ? ? ? A . n A 1 209 ARG 209 201 ? ? ? A . n A 1 210 GLU 210 202 ? ? ? A . n A 1 211 TYR 211 203 ? ? ? A . n A 1 212 HIS 212 204 ? ? ? A . n A 1 213 GLY 213 205 ? ? ? A . n A 1 214 ALA 214 206 ? ? ? A . n A 1 215 PRO 215 207 ? ? ? A . n A 1 216 ALA 216 208 ? ? ? A . n A 1 217 ASN 217 209 ? ? ? A . n A 1 218 TRP 218 210 ? ? ? A . n A 1 219 LEU 219 211 ? ? ? A . n A 1 220 GLU 220 212 ? ? ? A . n A 1 221 GLU 221 213 ? ? ? A . n A 1 222 ALA 222 214 ? ? ? A . n A 1 223 VAL 223 215 ? ? ? A . n A 1 224 LYS 224 216 ? ? ? A . n A 1 225 THR 225 217 ? ? ? A . n A 1 226 GLN 226 218 ? ? ? A . n A 1 227 PRO 227 219 ? ? ? A . n A 1 228 PHE 228 220 220 PHE PHE A . n A 1 229 GLY 229 221 221 GLY GLY A . n A 1 230 ARG 230 222 222 ARG ARG A . n A 1 231 LEU 231 223 223 LEU LEU A . n A 1 232 LEU 232 224 224 LEU LEU A . n A 1 233 ASP 233 225 225 ASP ASP A . n A 1 234 PRO 234 226 226 PRO PRO A . n A 1 235 ALA 235 227 227 ALA ALA A . n A 1 236 LYS 236 228 228 LYS LYS A . n A 1 237 VAL 237 229 229 VAL VAL A . n A 1 238 ALA 238 230 230 ALA ALA A . n A 1 239 ARG 239 231 231 ARG ARG A . n A 1 240 ALA 240 232 232 ALA ALA A . n A 1 241 ILE 241 233 233 ILE ILE A . n A 1 242 ALA 242 234 234 ALA ALA A . n A 1 243 PHE 243 235 235 PHE PHE A . n A 1 244 LEU 244 236 236 LEU LEU A . n A 1 245 ALA 245 237 237 ALA ALA A . n A 1 246 SER 246 238 238 SER SER A . n A 1 247 GLU 247 239 239 GLU GLU A . n A 1 248 GLU 248 240 240 GLU GLU A . n A 1 249 SER 249 241 241 SER SER A . n A 1 250 GLY 250 242 242 GLY GLY A . n A 1 251 LEU 251 243 243 LEU LEU A . n A 1 252 MET 252 244 244 MET MET A . n A 1 253 THR 253 245 245 THR THR A . n A 1 254 GLY 254 246 246 GLY GLY A . n A 1 255 ALA 255 247 247 ALA ALA A . n A 1 256 ILE 256 248 248 ILE ILE A . n A 1 257 VAL 257 249 249 VAL VAL A . n A 1 258 ASN 258 250 250 ASN ASN A . n A 1 259 PHE 259 251 251 PHE PHE A . n A 1 260 ASP 260 252 252 ASP ASP A . n A 1 261 GLN 261 253 253 GLN GLN A . n A 1 262 SER 262 254 254 SER SER A . n A 1 263 VAL 263 255 255 VAL VAL A . n A 1 264 TRP 264 256 256 TRP TRP A . n A 1 265 GLY 265 257 257 GLY GLY A . n A 1 266 ALA 266 258 258 ALA ALA A . n A 1 267 TYR 267 259 259 TYR TYR A . n A 1 268 ASP 268 260 260 ASP ASP A . n A 1 269 GLY 269 261 261 GLY GLY A . n A 1 270 SER 270 262 262 SER SER A . n A 1 271 PRO 271 263 263 PRO PRO A . n A 1 272 HIS 272 264 264 HIS HIS A . n A 1 273 PRO 273 265 265 PRO PRO A . n A 1 274 GLU 274 266 266 GLU GLU A . n A 1 275 LYS 275 267 267 LYS LYS A . n A 1 276 PRO 276 268 268 PRO PRO A . n A 1 277 LEU 277 269 269 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 301 1 EDO EDO A . C 2 EDO 1 302 2 EDO EDO A . D 3 HOH 1 401 1 HOH HOH A . D 3 HOH 2 402 2 HOH HOH A . D 3 HOH 3 403 3 HOH HOH A . D 3 HOH 4 404 4 HOH HOH A . D 3 HOH 5 405 5 HOH HOH A . D 3 HOH 6 406 6 HOH HOH A . D 3 HOH 7 407 7 HOH HOH A . D 3 HOH 8 408 8 HOH HOH A . D 3 HOH 9 409 9 HOH HOH A . D 3 HOH 10 410 10 HOH HOH A . D 3 HOH 11 411 11 HOH HOH A . D 3 HOH 12 412 12 HOH HOH A . D 3 HOH 13 413 13 HOH HOH A . D 3 HOH 14 414 14 HOH HOH A . D 3 HOH 15 415 15 HOH HOH A . D 3 HOH 16 416 16 HOH HOH A . D 3 HOH 17 417 17 HOH HOH A . D 3 HOH 18 418 18 HOH HOH A . D 3 HOH 19 419 19 HOH HOH A . D 3 HOH 20 420 20 HOH HOH A . D 3 HOH 21 421 21 HOH HOH A . D 3 HOH 22 422 22 HOH HOH A . D 3 HOH 23 423 23 HOH HOH A . D 3 HOH 24 424 24 HOH HOH A . D 3 HOH 25 425 25 HOH HOH A . D 3 HOH 26 426 26 HOH HOH A . D 3 HOH 27 427 27 HOH HOH A . D 3 HOH 28 428 28 HOH HOH A . D 3 HOH 29 429 29 HOH HOH A . D 3 HOH 30 430 30 HOH HOH A . D 3 HOH 31 431 31 HOH HOH A . D 3 HOH 32 432 32 HOH HOH A . D 3 HOH 33 433 33 HOH HOH A . D 3 HOH 34 434 34 HOH HOH A . D 3 HOH 35 435 35 HOH HOH A . D 3 HOH 36 436 36 HOH HOH A . D 3 HOH 37 437 37 HOH HOH A . D 3 HOH 38 438 38 HOH HOH A . D 3 HOH 39 439 39 HOH HOH A . D 3 HOH 40 440 40 HOH HOH A . D 3 HOH 41 441 42 HOH HOH A . D 3 HOH 42 442 43 HOH HOH A . D 3 HOH 43 443 44 HOH HOH A . D 3 HOH 44 444 45 HOH HOH A . D 3 HOH 45 445 46 HOH HOH A . D 3 HOH 46 446 47 HOH HOH A . D 3 HOH 47 447 48 HOH HOH A . D 3 HOH 48 448 49 HOH HOH A . D 3 HOH 49 449 50 HOH HOH A . D 3 HOH 50 450 51 HOH HOH A . D 3 HOH 51 451 52 HOH HOH A . D 3 HOH 52 452 53 HOH HOH A . D 3 HOH 53 453 54 HOH HOH A . D 3 HOH 54 454 55 HOH HOH A . D 3 HOH 55 455 56 HOH HOH A . D 3 HOH 56 456 57 HOH HOH A . D 3 HOH 57 457 58 HOH HOH A . D 3 HOH 58 458 60 HOH HOH A . D 3 HOH 59 459 61 HOH HOH A . D 3 HOH 60 460 62 HOH HOH A . D 3 HOH 61 461 63 HOH HOH A . D 3 HOH 62 462 64 HOH HOH A . D 3 HOH 63 463 65 HOH HOH A . D 3 HOH 64 464 66 HOH HOH A . D 3 HOH 65 465 67 HOH HOH A . D 3 HOH 66 466 68 HOH HOH A . D 3 HOH 67 467 69 HOH HOH A . D 3 HOH 68 468 70 HOH HOH A . D 3 HOH 69 469 71 HOH HOH A . D 3 HOH 70 470 72 HOH HOH A . D 3 HOH 71 471 73 HOH HOH A . D 3 HOH 72 472 74 HOH HOH A . D 3 HOH 73 473 75 HOH HOH A . D 3 HOH 74 474 76 HOH HOH A . D 3 HOH 75 475 77 HOH HOH A . D 3 HOH 76 476 78 HOH HOH A . D 3 HOH 77 477 79 HOH HOH A . D 3 HOH 78 478 80 HOH HOH A . D 3 HOH 79 479 81 HOH HOH A . D 3 HOH 80 480 82 HOH HOH A . D 3 HOH 81 481 83 HOH HOH A . D 3 HOH 82 482 84 HOH HOH A . D 3 HOH 83 483 85 HOH HOH A . D 3 HOH 84 484 86 HOH HOH A . D 3 HOH 85 485 87 HOH HOH A . D 3 HOH 86 486 88 HOH HOH A . D 3 HOH 87 487 89 HOH HOH A . D 3 HOH 88 488 91 HOH HOH A . D 3 HOH 89 489 92 HOH HOH A . D 3 HOH 90 490 93 HOH HOH A . D 3 HOH 91 491 94 HOH HOH A . D 3 HOH 92 492 95 HOH HOH A . D 3 HOH 93 493 96 HOH HOH A . D 3 HOH 94 494 97 HOH HOH A . D 3 HOH 95 495 98 HOH HOH A . D 3 HOH 96 496 99 HOH HOH A . D 3 HOH 97 497 100 HOH HOH A . D 3 HOH 98 498 101 HOH HOH A . D 3 HOH 99 499 102 HOH HOH A . D 3 HOH 100 500 103 HOH HOH A . D 3 HOH 101 501 104 HOH HOH A . D 3 HOH 102 502 105 HOH HOH A . D 3 HOH 103 503 106 HOH HOH A . D 3 HOH 104 504 108 HOH HOH A . D 3 HOH 105 505 110 HOH HOH A . D 3 HOH 106 506 111 HOH HOH A . D 3 HOH 107 507 112 HOH HOH A . D 3 HOH 108 508 114 HOH HOH A . D 3 HOH 109 509 115 HOH HOH A . D 3 HOH 110 510 116 HOH HOH A . D 3 HOH 111 511 117 HOH HOH A . D 3 HOH 112 512 118 HOH HOH A . D 3 HOH 113 513 119 HOH HOH A . D 3 HOH 114 514 120 HOH HOH A . D 3 HOH 115 515 121 HOH HOH A . D 3 HOH 116 516 123 HOH HOH A . D 3 HOH 117 517 124 HOH HOH A . D 3 HOH 118 518 125 HOH HOH A . D 3 HOH 119 519 126 HOH HOH A . D 3 HOH 120 520 127 HOH HOH A . D 3 HOH 121 521 128 HOH HOH A . D 3 HOH 122 522 129 HOH HOH A . D 3 HOH 123 523 130 HOH HOH A . D 3 HOH 124 524 131 HOH HOH A . D 3 HOH 125 525 132 HOH HOH A . D 3 HOH 126 526 133 HOH HOH A . D 3 HOH 127 527 134 HOH HOH A . D 3 HOH 128 528 135 HOH HOH A . D 3 HOH 129 529 136 HOH HOH A . D 3 HOH 130 530 137 HOH HOH A . D 3 HOH 131 531 138 HOH HOH A . D 3 HOH 132 532 139 HOH HOH A . D 3 HOH 133 533 140 HOH HOH A . D 3 HOH 134 534 141 HOH HOH A . D 3 HOH 135 535 142 HOH HOH A . D 3 HOH 136 536 144 HOH HOH A . D 3 HOH 137 537 145 HOH HOH A . D 3 HOH 138 538 146 HOH HOH A . D 3 HOH 139 539 147 HOH HOH A . D 3 HOH 140 540 148 HOH HOH A . D 3 HOH 141 541 149 HOH HOH A . D 3 HOH 142 542 150 HOH HOH A . D 3 HOH 143 543 151 HOH HOH A . D 3 HOH 144 544 152 HOH HOH A . D 3 HOH 145 545 153 HOH HOH A . D 3 HOH 146 546 154 HOH HOH A . D 3 HOH 147 547 155 HOH HOH A . D 3 HOH 148 548 156 HOH HOH A . D 3 HOH 149 549 157 HOH HOH A . D 3 HOH 150 550 158 HOH HOH A . D 3 HOH 151 551 159 HOH HOH A . D 3 HOH 152 552 161 HOH HOH A . D 3 HOH 153 553 162 HOH HOH A . D 3 HOH 154 554 163 HOH HOH A . D 3 HOH 155 555 164 HOH HOH A . D 3 HOH 156 556 165 HOH HOH A . D 3 HOH 157 557 166 HOH HOH A . D 3 HOH 158 558 167 HOH HOH A . D 3 HOH 159 559 168 HOH HOH A . D 3 HOH 160 560 169 HOH HOH A . D 3 HOH 161 561 170 HOH HOH A . D 3 HOH 162 562 171 HOH HOH A . D 3 HOH 163 563 172 HOH HOH A . D 3 HOH 164 564 173 HOH HOH A . D 3 HOH 165 565 174 HOH HOH A . D 3 HOH 166 566 175 HOH HOH A . D 3 HOH 167 567 176 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D 3 1,2,3,4 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 4660 ? 2 MORE -22 ? 2 'SSA (A^2)' 19170 ? 3 'ABSA (A^2)' 18610 ? 3 MORE -104 ? 3 'SSA (A^2)' 29050 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_545 y+1/2,x-1/2,-z+1/2 0.0000000000 1.0000000000 0.0000000000 59.1050000000 1.0000000000 0.0000000000 0.0000000000 -59.1050000000 0.0000000000 0.0000000000 -1.0000000000 42.5900000000 3 'crystal symmetry operation' 10_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 118.2100000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 16_555 -y+1/2,-x+1/2,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 59.1050000000 -1.0000000000 0.0000000000 0.0000000000 59.1050000000 0.0000000000 0.0000000000 -1.0000000000 42.5900000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 444 ? D HOH . 2 1 A HOH 452 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-20 2 'Structure model' 1 1 2014-02-26 3 'Structure model' 1 2 2015-09-16 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 1 4 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' Other 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 74.1208 10.9927 -5.6642 0.2223 0.0755 0.0246 0.0152 0.0602 0.0141 2.2872 2.7114 2.9580 0.2837 -0.4605 0.6218 -0.0333 -0.0104 0.0437 0.1538 -0.0884 -0.0984 -0.3100 0.0985 0.2173 'X-RAY DIFFRACTION' 2 ? refined 71.1970 14.5469 9.0894 0.1262 0.0674 0.0576 0.0038 0.0079 0.0049 0.4253 0.8502 0.8109 -0.1534 0.2593 -0.2896 0.0250 -0.0118 -0.0132 0.0486 0.0009 -0.0338 -0.1822 -0.0851 0.1466 'X-RAY DIFFRACTION' 3 ? refined 68.1588 2.1911 4.1070 0.1548 0.0778 0.1036 -0.0193 0.0221 -0.0031 3.1449 5.0356 2.9419 -2.3506 -0.6066 -0.0949 -0.0283 0.0084 0.0199 0.0638 -0.1092 -0.1320 -0.2534 0.1667 0.2448 'X-RAY DIFFRACTION' 4 ? refined 65.3043 -2.8739 12.2078 0.1139 0.0634 0.0900 0.0176 0.0097 -0.0088 0.2494 0.7706 1.1064 0.0309 0.0884 -0.1686 0.0129 0.0168 -0.0297 0.0269 -0.0526 -0.0390 -0.1717 0.0535 0.0585 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 52 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 53 A 179 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 180 A 231 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 232 A 269 ? . . . . ? # _pdbx_phasing_MR.entry_id 4NIM _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation ? _pdbx_phasing_MR.d_res_low_rotation ? _pdbx_phasing_MR.d_res_high_translation ? _pdbx_phasing_MR.d_res_low_translation ? _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.5.5 'Tue Oct 1 01:18:20 2013' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 170 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 170 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 170 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.73 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.57 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 117 ? ? -131.71 -53.91 2 1 SER A 144 ? ? -108.69 -157.51 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 6 ? CG ? A LYS 14 CG 2 1 Y 1 A LYS 6 ? CD ? A LYS 14 CD 3 1 Y 1 A LYS 6 ? CE ? A LYS 14 CE 4 1 Y 1 A LYS 6 ? NZ ? A LYS 14 NZ 5 1 Y 1 A GLU 43 ? CG ? A GLU 51 CG 6 1 Y 1 A GLU 43 ? CD ? A GLU 51 CD 7 1 Y 1 A GLU 43 ? OE1 ? A GLU 51 OE1 8 1 Y 1 A GLU 43 ? OE2 ? A GLU 51 OE2 9 1 Y 1 A ARG 46 ? CG ? A ARG 54 CG 10 1 Y 1 A ARG 46 ? CD ? A ARG 54 CD 11 1 Y 1 A ARG 46 ? NE ? A ARG 54 NE 12 1 Y 1 A ARG 46 ? CZ ? A ARG 54 CZ 13 1 Y 1 A ARG 46 ? NH1 ? A ARG 54 NH1 14 1 Y 1 A ARG 46 ? NH2 ? A ARG 54 NH2 15 1 Y 1 A GLU 54 ? CG ? A GLU 62 CG 16 1 Y 1 A GLU 54 ? CD ? A GLU 62 CD 17 1 Y 1 A GLU 54 ? OE1 ? A GLU 62 OE1 18 1 Y 1 A GLU 54 ? OE2 ? A GLU 62 OE2 19 1 Y 1 A LYS 58 ? CG ? A LYS 66 CG 20 1 Y 1 A LYS 58 ? CD ? A LYS 66 CD 21 1 Y 1 A LYS 58 ? CE ? A LYS 66 CE 22 1 Y 1 A LYS 58 ? NZ ? A LYS 66 NZ 23 1 Y 1 A ARG 135 ? CG ? A ARG 143 CG 24 1 Y 1 A ARG 135 ? CD ? A ARG 143 CD 25 1 Y 1 A ARG 135 ? NE ? A ARG 143 NE 26 1 Y 1 A ARG 135 ? CZ ? A ARG 143 CZ 27 1 Y 1 A ARG 135 ? NH1 ? A ARG 143 NH1 28 1 Y 1 A ARG 135 ? NH2 ? A ARG 143 NH2 29 1 Y 1 A ARG 222 ? CG ? A ARG 230 CG 30 1 Y 1 A ARG 222 ? CD ? A ARG 230 CD 31 1 Y 1 A ARG 222 ? NE ? A ARG 230 NE 32 1 Y 1 A ARG 222 ? CZ ? A ARG 230 CZ 33 1 Y 1 A ARG 222 ? NH1 ? A ARG 230 NH1 34 1 Y 1 A ARG 222 ? NH2 ? A ARG 230 NH2 35 1 Y 1 A GLU 239 ? CG ? A GLU 247 CG 36 1 Y 1 A GLU 239 ? CD ? A GLU 247 CD 37 1 Y 1 A GLU 239 ? OE1 ? A GLU 247 OE1 38 1 Y 1 A GLU 239 ? OE2 ? A GLU 247 OE2 39 1 Y 1 A LYS 267 ? CG ? A LYS 275 CG 40 1 Y 1 A LYS 267 ? CD ? A LYS 275 CD 41 1 Y 1 A LYS 267 ? CE ? A LYS 275 CE 42 1 Y 1 A LYS 267 ? NZ ? A LYS 275 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -7 ? A MET 1 2 1 Y 1 A ALA -6 ? A ALA 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A HIS 0 ? A HIS 8 9 1 Y 1 A MET 1 ? A MET 9 10 1 Y 1 A GLY 2 ? A GLY 10 11 1 Y 1 A SER 193 ? A SER 201 12 1 Y 1 A ASP 194 ? A ASP 202 13 1 Y 1 A GLY 195 ? A GLY 203 14 1 Y 1 A GLU 196 ? A GLU 204 15 1 Y 1 A ASP 197 ? A ASP 205 16 1 Y 1 A ARG 198 ? A ARG 206 17 1 Y 1 A ILE 199 ? A ILE 207 18 1 Y 1 A GLN 200 ? A GLN 208 19 1 Y 1 A ARG 201 ? A ARG 209 20 1 Y 1 A GLU 202 ? A GLU 210 21 1 Y 1 A TYR 203 ? A TYR 211 22 1 Y 1 A HIS 204 ? A HIS 212 23 1 Y 1 A GLY 205 ? A GLY 213 24 1 Y 1 A ALA 206 ? A ALA 214 25 1 Y 1 A PRO 207 ? A PRO 215 26 1 Y 1 A ALA 208 ? A ALA 216 27 1 Y 1 A ASN 209 ? A ASN 217 28 1 Y 1 A TRP 210 ? A TRP 218 29 1 Y 1 A LEU 211 ? A LEU 219 30 1 Y 1 A GLU 212 ? A GLU 220 31 1 Y 1 A GLU 213 ? A GLU 221 32 1 Y 1 A ALA 214 ? A ALA 222 33 1 Y 1 A VAL 215 ? A VAL 223 34 1 Y 1 A LYS 216 ? A LYS 224 35 1 Y 1 A THR 217 ? A THR 225 36 1 Y 1 A GLN 218 ? A GLN 226 37 1 Y 1 A PRO 219 ? A PRO 227 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YBV _pdbx_initial_refinement_model.details 'PDB ENTRY 1YBV' #