HEADER TRANSFERASE 13-NOV-13 4NKT TITLE STRUCTURE OF CID1 IN COMPLEX WITH THE UTP ANALOG UMPNPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) RNA POLYMERASE PROTEIN CID1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 40-377; COMPND 5 SYNONYM: CAFFEINE-INDUCED DEATH PROTEIN 1; COMPND 6 EC: 2.7.7.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 GENE: CID1, SPAC19D5.03; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET42-BASED KEYWDS POLY(U) POLYMERASE, NUCLEOTIDYL TRANFER DOMAIN, PAP-ASSOCIATED KEYWDS 2 DOMAIN, UTP BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.MUNOZ-TELLO,C.GABUS,S.THORE REVDAT 4 20-SEP-23 4NKT 1 REMARK SEQADV REVDAT 3 26-MAR-14 4NKT 1 JRNL REVDAT 2 15-JAN-14 4NKT 1 JRNL REVDAT 1 18-DEC-13 4NKT 0 JRNL AUTH P.MUNOZ-TELLO,C.GABUS,S.THORE JRNL TITL A CRITICAL SWITCH IN THE ENZYMATIC PROPERTIES OF THE CID1 JRNL TITL 2 PROTEIN DECIPHERED FROM ITS PRODUCT-BOUND CRYSTAL STRUCTURE. JRNL REF NUCLEIC ACIDS RES. V. 42 3372 2014 JRNL REFN ISSN 0305-1048 JRNL PMID 24322298 JRNL DOI 10.1093/NAR/GKT1278 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 52778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8392 - 3.7923 0.97 6388 130 0.1677 0.1819 REMARK 3 2 3.7923 - 3.0135 1.00 6510 142 0.1714 0.1935 REMARK 3 3 3.0135 - 2.6335 1.00 6484 137 0.1933 0.2307 REMARK 3 4 2.6335 - 2.3932 1.00 6495 136 0.1851 0.2596 REMARK 3 5 2.3932 - 2.2219 1.00 6443 130 0.1831 0.2264 REMARK 3 6 2.2219 - 2.0910 1.00 6443 135 0.1861 0.2105 REMARK 3 7 2.0910 - 1.9864 1.00 6444 148 0.1879 0.2557 REMARK 3 8 1.9864 - 1.9000 1.00 6480 133 0.1955 0.2337 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5297 REMARK 3 ANGLE : 1.082 7162 REMARK 3 CHIRALITY : 0.077 785 REMARK 3 PLANARITY : 0.004 892 REMARK 3 DIHEDRAL : 14.898 1999 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9394 REMARK 200 MONOCHROMATOR : CHANNEL CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS PACKAGE REMARK 200 DATA SCALING SOFTWARE : XDS PACKAGE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52778 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.04400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 11.19 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4EP7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE/MES, PH 6.1, 20% REMARK 280 GLYCEROL, 10% PEG4000, 126 MM HALOGENS (SODIUM IODIDE, SODIUM REMARK 280 BROMIDE, SODIUM FLUORIDE), 10 MM TCEP, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.66000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 37 REMARK 465 ASP A 109 REMARK 465 SER A 110 REMARK 465 ARG A 111 REMARK 465 VAL A 112 REMARK 465 GLN A 113 REMARK 465 SER A 114 REMARK 465 ASP A 115 REMARK 465 ALA A 309 REMARK 465 THR A 310 REMARK 465 GLU A 311 REMARK 465 HIS A 312 REMARK 465 THR A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 ALA A 316 REMARK 465 ASP A 317 REMARK 465 GLN A 318 REMARK 465 ILE A 319 REMARK 465 ILE A 320 REMARK 465 LYS A 321 REMARK 465 ASP A 322 REMARK 465 GLY B 37 REMARK 465 ASP B 109 REMARK 465 SER B 110 REMARK 465 ARG B 111 REMARK 465 VAL B 112 REMARK 465 GLN B 113 REMARK 465 SER B 114 REMARK 465 ASP B 115 REMARK 465 ARG B 137 REMARK 465 ALA B 138 REMARK 465 ARG B 139 REMARK 465 ASP B 148 REMARK 465 THR B 149 REMARK 465 LYS B 150 REMARK 465 ASN B 151 REMARK 465 GLY B 152 REMARK 465 PHE B 153 REMARK 465 GLY B 154 REMARK 465 ALA B 155 REMARK 465 ALA B 309 REMARK 465 THR B 310 REMARK 465 GLU B 311 REMARK 465 HIS B 312 REMARK 465 THR B 313 REMARK 465 GLY B 314 REMARK 465 SER B 315 REMARK 465 ALA B 316 REMARK 465 ASP B 317 REMARK 465 GLN B 318 REMARK 465 ILE B 319 REMARK 465 ILE B 320 REMARK 465 LYS B 321 REMARK 465 ASP B 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 84 O HOH A 545 1.96 REMARK 500 OE2 GLU A 54 O HOH A 794 2.04 REMARK 500 O2G 2KH A 401 O HOH A 701 2.05 REMARK 500 NH2 ARG A 364 O HOH A 697 2.09 REMARK 500 O HOH B 593 O HOH B 605 2.13 REMARK 500 N ASP A 38 O HOH A 686 2.15 REMARK 500 O HOH B 676 O HOH B 700 2.15 REMARK 500 N ARG B 323 O HOH B 700 2.16 REMARK 500 O2A 2KH B 401 O HOH B 546 2.16 REMARK 500 O HOH A 606 O HOH A 747 2.17 REMARK 500 O HOH B 576 O HOH B 648 2.17 REMARK 500 OD1 ASP B 253 O HOH B 593 2.17 REMARK 500 O HOH A 789 O HOH B 579 2.17 REMARK 500 O SER B 308 O HOH B 543 2.18 REMARK 500 O HOH A 789 O HOH B 581 2.18 REMARK 500 O HOH A 701 O HOH A 793 2.18 REMARK 500 NH2 ARG B 359 O HOH B 533 2.18 REMARK 500 O HOH B 642 O HOH B 671 2.18 REMARK 500 O HOH A 606 O HOH A 661 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 150 -29.29 -140.68 REMARK 500 THR A 208 -150.03 -114.25 REMARK 500 ASP A 253 97.40 -65.49 REMARK 500 TRP A 306 70.21 -108.15 REMARK 500 THR A 307 -60.94 -107.05 REMARK 500 THR B 208 -154.01 -107.03 REMARK 500 THR B 307 -76.93 -81.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2KH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2KH B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NKU RELATED DB: PDB DBREF 4NKT A 40 377 UNP O13833 CID1_SCHPO 40 377 DBREF 4NKT B 40 377 UNP O13833 CID1_SCHPO 40 377 SEQADV 4NKT GLY A 37 UNP O13833 EXPRESSION TAG SEQADV 4NKT ASP A 38 UNP O13833 EXPRESSION TAG SEQADV 4NKT MET A 39 UNP O13833 EXPRESSION TAG SEQADV 4NKT ALA A 160 UNP O13833 ASP 160 ENGINEERED MUTATION SEQADV 4NKT GLY B 37 UNP O13833 EXPRESSION TAG SEQADV 4NKT ASP B 38 UNP O13833 EXPRESSION TAG SEQADV 4NKT MET B 39 UNP O13833 EXPRESSION TAG SEQADV 4NKT ALA B 160 UNP O13833 ASP 160 ENGINEERED MUTATION SEQRES 1 A 341 GLY ASP MET SER HIS LYS GLU PHE THR LYS PHE CYS TYR SEQRES 2 A 341 GLU VAL TYR ASN GLU ILE LYS ILE SER ASP LYS GLU PHE SEQRES 3 A 341 LYS GLU LYS ARG ALA ALA LEU ASP THR LEU ARG LEU CYS SEQRES 4 A 341 LEU LYS ARG ILE SER PRO ASP ALA GLU LEU VAL ALA PHE SEQRES 5 A 341 GLY SER LEU GLU SER GLY LEU ALA LEU LYS ASN SER ASP SEQRES 6 A 341 MET ASP LEU CYS VAL LEU MET ASP SER ARG VAL GLN SER SEQRES 7 A 341 ASP THR ILE ALA LEU GLN PHE TYR GLU GLU LEU ILE ALA SEQRES 8 A 341 GLU GLY PHE GLU GLY LYS PHE LEU GLN ARG ALA ARG ILE SEQRES 9 A 341 PRO ILE ILE LYS LEU THR SER ASP THR LYS ASN GLY PHE SEQRES 10 A 341 GLY ALA SER PHE GLN CYS ALA ILE GLY PHE ASN ASN ARG SEQRES 11 A 341 LEU ALA ILE HIS ASN THR LEU LEU LEU SER SER TYR THR SEQRES 12 A 341 LYS LEU ASP ALA ARG LEU LYS PRO MET VAL LEU LEU VAL SEQRES 13 A 341 LYS HIS TRP ALA LYS ARG LYS GLN ILE ASN SER PRO TYR SEQRES 14 A 341 PHE GLY THR LEU SER SER TYR GLY TYR VAL LEU MET VAL SEQRES 15 A 341 LEU TYR TYR LEU ILE HIS VAL ILE LYS PRO PRO VAL PHE SEQRES 16 A 341 PRO ASN LEU LEU LEU SER PRO LEU LYS GLN GLU LYS ILE SEQRES 17 A 341 VAL ASP GLY PHE ASP VAL GLY PHE ASP ASP LYS LEU GLU SEQRES 18 A 341 ASP ILE PRO PRO SER GLN ASN TYR SER SER LEU GLY SER SEQRES 19 A 341 LEU LEU HIS GLY PHE PHE ARG PHE TYR ALA TYR LYS PHE SEQRES 20 A 341 GLU PRO ARG GLU LYS VAL VAL THR PHE ARG ARG PRO ASP SEQRES 21 A 341 GLY TYR LEU THR LYS GLN GLU LYS GLY TRP THR SER ALA SEQRES 22 A 341 THR GLU HIS THR GLY SER ALA ASP GLN ILE ILE LYS ASP SEQRES 23 A 341 ARG TYR ILE LEU ALA ILE GLU ASP PRO PHE GLU ILE SER SEQRES 24 A 341 HIS ASN VAL GLY ARG THR VAL SER SER SER GLY LEU TYR SEQRES 25 A 341 ARG ILE ARG GLY GLU PHE MET ALA ALA SER ARG LEU LEU SEQRES 26 A 341 ASN SER ARG SER TYR PRO ILE PRO TYR ASP SER LEU PHE SEQRES 27 A 341 GLU GLU ALA SEQRES 1 B 341 GLY ASP MET SER HIS LYS GLU PHE THR LYS PHE CYS TYR SEQRES 2 B 341 GLU VAL TYR ASN GLU ILE LYS ILE SER ASP LYS GLU PHE SEQRES 3 B 341 LYS GLU LYS ARG ALA ALA LEU ASP THR LEU ARG LEU CYS SEQRES 4 B 341 LEU LYS ARG ILE SER PRO ASP ALA GLU LEU VAL ALA PHE SEQRES 5 B 341 GLY SER LEU GLU SER GLY LEU ALA LEU LYS ASN SER ASP SEQRES 6 B 341 MET ASP LEU CYS VAL LEU MET ASP SER ARG VAL GLN SER SEQRES 7 B 341 ASP THR ILE ALA LEU GLN PHE TYR GLU GLU LEU ILE ALA SEQRES 8 B 341 GLU GLY PHE GLU GLY LYS PHE LEU GLN ARG ALA ARG ILE SEQRES 9 B 341 PRO ILE ILE LYS LEU THR SER ASP THR LYS ASN GLY PHE SEQRES 10 B 341 GLY ALA SER PHE GLN CYS ALA ILE GLY PHE ASN ASN ARG SEQRES 11 B 341 LEU ALA ILE HIS ASN THR LEU LEU LEU SER SER TYR THR SEQRES 12 B 341 LYS LEU ASP ALA ARG LEU LYS PRO MET VAL LEU LEU VAL SEQRES 13 B 341 LYS HIS TRP ALA LYS ARG LYS GLN ILE ASN SER PRO TYR SEQRES 14 B 341 PHE GLY THR LEU SER SER TYR GLY TYR VAL LEU MET VAL SEQRES 15 B 341 LEU TYR TYR LEU ILE HIS VAL ILE LYS PRO PRO VAL PHE SEQRES 16 B 341 PRO ASN LEU LEU LEU SER PRO LEU LYS GLN GLU LYS ILE SEQRES 17 B 341 VAL ASP GLY PHE ASP VAL GLY PHE ASP ASP LYS LEU GLU SEQRES 18 B 341 ASP ILE PRO PRO SER GLN ASN TYR SER SER LEU GLY SER SEQRES 19 B 341 LEU LEU HIS GLY PHE PHE ARG PHE TYR ALA TYR LYS PHE SEQRES 20 B 341 GLU PRO ARG GLU LYS VAL VAL THR PHE ARG ARG PRO ASP SEQRES 21 B 341 GLY TYR LEU THR LYS GLN GLU LYS GLY TRP THR SER ALA SEQRES 22 B 341 THR GLU HIS THR GLY SER ALA ASP GLN ILE ILE LYS ASP SEQRES 23 B 341 ARG TYR ILE LEU ALA ILE GLU ASP PRO PHE GLU ILE SER SEQRES 24 B 341 HIS ASN VAL GLY ARG THR VAL SER SER SER GLY LEU TYR SEQRES 25 B 341 ARG ILE ARG GLY GLU PHE MET ALA ALA SER ARG LEU LEU SEQRES 26 B 341 ASN SER ARG SER TYR PRO ILE PRO TYR ASP SER LEU PHE SEQRES 27 B 341 GLU GLU ALA HET 2KH A 401 29 HET BR A 402 1 HET BR A 403 1 HET MG A 404 1 HET 2KH B 401 29 HET BR B 402 1 HET MG B 403 1 HET MG B 404 1 HET MG B 405 1 HETNAM 2KH 5'-O-[(S)-HYDROXY{[(S)-HYDROXY(PHOSPHONOOXY) HETNAM 2 2KH PHOSPHORYL]AMINO}PHOSPHORYL]URIDINE HETNAM BR BROMIDE ION HETNAM MG MAGNESIUM ION FORMUL 3 2KH 2(C9 H16 N3 O14 P3) FORMUL 4 BR 3(BR 1-) FORMUL 6 MG 4(MG 2+) FORMUL 12 HOH *511(H2 O) HELIX 1 1 HIS A 41 LYS A 56 1 16 HELIX 2 2 SER A 58 ARG A 78 1 21 HELIX 3 3 GLY A 89 GLY A 94 1 6 HELIX 4 4 ILE A 117 GLU A 128 1 12 HELIX 5 5 ASN A 165 ASP A 182 1 18 HELIX 6 6 ARG A 184 LYS A 199 1 16 HELIX 7 7 SER A 203 GLY A 207 5 5 HELIX 8 8 SER A 210 VAL A 225 1 16 HELIX 9 9 LYS A 255 ILE A 259 5 5 HELIX 10 10 SER A 267 LYS A 282 1 16 HELIX 11 11 THR A 300 GLY A 305 1 6 HELIX 12 12 SER A 343 ASN A 362 1 20 HELIX 13 13 PRO A 369 GLU A 375 5 7 HELIX 14 14 HIS B 41 LYS B 56 1 16 HELIX 15 15 SER B 58 SER B 80 1 23 HELIX 16 16 GLY B 89 GLY B 94 1 6 HELIX 17 17 ILE B 117 ALA B 127 1 11 HELIX 18 18 ASN B 165 ASP B 182 1 18 HELIX 19 19 ARG B 184 LYS B 199 1 16 HELIX 20 20 SER B 203 GLY B 207 5 5 HELIX 21 21 SER B 210 VAL B 225 1 16 HELIX 22 22 ASN B 233 SER B 237 5 5 HELIX 23 23 LYS B 255 ILE B 259 5 5 HELIX 24 24 SER B 267 LYS B 282 1 16 HELIX 25 25 THR B 300 GLY B 305 1 6 HELIX 26 26 ASN B 337 VAL B 342 5 6 HELIX 27 27 SER B 343 ASN B 362 1 20 HELIX 28 28 PRO B 369 GLU B 375 5 7 SHEET 1 A 5 GLU A 84 PHE A 88 0 SHEET 2 A 5 MET A 102 LEU A 107 -1 O CYS A 105 N VAL A 86 SHEET 3 A 5 CYS A 159 PHE A 163 1 O ALA A 160 N LEU A 104 SHEET 4 A 5 ILE A 143 ASP A 148 -1 N ILE A 143 O ILE A 161 SHEET 5 A 5 PHE A 130 PHE A 134 -1 N GLU A 131 O THR A 146 SHEET 1 B 2 ILE A 244 VAL A 245 0 SHEET 2 B 2 PHE A 248 ASP A 249 -1 O PHE A 248 N VAL A 245 SHEET 1 C 5 GLU B 84 PHE B 88 0 SHEET 2 C 5 MET B 102 LEU B 107 -1 O CYS B 105 N VAL B 86 SHEET 3 C 5 CYS B 159 PHE B 163 1 O GLY B 162 N VAL B 106 SHEET 4 C 5 ILE B 142 SER B 147 -1 N LEU B 145 O CYS B 159 SHEET 5 C 5 GLU B 131 LEU B 135 -1 N LYS B 133 O LYS B 144 SHEET 1 D 2 ILE B 244 VAL B 245 0 SHEET 2 D 2 PHE B 248 ASP B 249 -1 O PHE B 248 N VAL B 245 LINK OD1 ASN B 362 MG MG B 403 1555 1555 2.92 CISPEP 1 LYS A 227 PRO A 228 0 -4.64 CISPEP 2 TYR A 366 PRO A 367 0 -6.35 CISPEP 3 LYS B 227 PRO B 228 0 -6.13 CISPEP 4 TYR B 366 PRO B 367 0 1.36 SITE 1 AC1 28 PHE A 88 GLY A 89 SER A 90 ASP A 103 SITE 2 AC1 28 ALA A 168 ASN A 171 THR A 172 LYS A 193 SITE 3 AC1 28 LYS A 197 ASN A 202 SER A 210 SER A 211 SITE 4 AC1 28 TYR A 212 HIS A 336 BR A 403 MG A 404 SITE 5 AC1 28 HOH A 512 HOH A 532 HOH A 537 HOH A 562 SITE 6 AC1 28 HOH A 583 HOH A 628 HOH A 673 HOH A 688 SITE 7 AC1 28 HOH A 701 HOH A 772 HOH A 792 HOH A 793 SITE 1 AC2 2 ARG A 277 HOH A 784 SITE 1 AC3 1 2KH A 401 SITE 1 AC4 2 ASN A 165 2KH A 401 SITE 1 AC5 22 PHE B 88 GLY B 89 SER B 90 ASP B 101 SITE 2 AC5 22 ALA B 168 ASN B 171 THR B 172 LYS B 193 SITE 3 AC5 22 LYS B 197 ASN B 202 SER B 210 SER B 211 SITE 4 AC5 22 TYR B 212 HIS B 336 BR B 402 MG B 404 SITE 5 AC5 22 HOH B 507 HOH B 546 HOH B 573 HOH B 648 SITE 6 AC5 22 HOH B 658 HOH B 693 SITE 1 AC6 1 2KH B 401 SITE 1 AC7 1 ASN B 362 SITE 1 AC8 2 ASN B 165 2KH B 401 SITE 1 AC9 1 THR B 45 CRYST1 53.770 77.320 82.110 90.00 90.86 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018598 0.000000 0.000280 0.00000 SCALE2 0.000000 0.012933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012180 0.00000