data_4NMY # _entry.id 4NMY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NMY RCSB RCSB083404 WWPDB D_1000083404 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP05631 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NMY _pdbx_database_status.recvd_initial_deposition_date 2013-11-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Zhou, M.' 2 'Grimshaw, S.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'Crystal Structure of the Thiamin-bound form of Substrate-binding Protein of ABC Transporter from Clostridium difficile' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Zhou, M.' 2 primary 'Grimshaw, S.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _cell.entry_id 4NMY _cell.length_a 49.529 _cell.length_b 76.867 _cell.length_c 154.901 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NMY _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ABC-type transport system, extracellular solute-binding protein' 34362.852 2 ? ? ? ? 2 non-polymer syn '3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM' 265.355 2 ? ? ? ? 3 water nat water 18.015 419 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNASSKKVT(MSE)VLDWTPNTNHTGLFVALDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGISYQEQVTYAKTSED PLPIKAVATVIQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAV(MSE)KKNRADFNKLKIVNTGQDDFFAA (MSE)KTVDFAWIFEGWDAVKADLIGYDLNFIPVKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNP EESAKILVKHAPEVDEKLALKSQEYLASKYKDDAPRWGE(MSE)KDSVWNNYTSFLKEYKLIDKD(MSE)KASDAYTNEF LPQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SNASSKKVTMVLDWTPNTNHTGLFVALDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGISYQEQVTYAKTSEDPLPI KAVATVIQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRADFNKLKIVNTGQDDFFAAMKTVDFAW IFEGWDAVKADLIGYDLNFIPVKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNPEESAKILVKHAP EVDEKLALKSQEYLASKYKDDAPRWGEMKDSVWNNYTSFLKEYKLIDKDMKASDAYTNEFLPQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CSGID-IDP05631 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 SER n 1 5 SER n 1 6 LYS n 1 7 LYS n 1 8 VAL n 1 9 THR n 1 10 MSE n 1 11 VAL n 1 12 LEU n 1 13 ASP n 1 14 TRP n 1 15 THR n 1 16 PRO n 1 17 ASN n 1 18 THR n 1 19 ASN n 1 20 HIS n 1 21 THR n 1 22 GLY n 1 23 LEU n 1 24 PHE n 1 25 VAL n 1 26 ALA n 1 27 LEU n 1 28 ASP n 1 29 LYS n 1 30 GLY n 1 31 TYR n 1 32 TYR n 1 33 LYS n 1 34 GLU n 1 35 GLU n 1 36 GLY n 1 37 LEU n 1 38 ASP n 1 39 VAL n 1 40 GLU n 1 41 ILE n 1 42 VAL n 1 43 GLN n 1 44 PRO n 1 45 PRO n 1 46 GLU n 1 47 SER n 1 48 GLY n 1 49 ALA n 1 50 GLU n 1 51 THR n 1 52 LEU n 1 53 VAL n 1 54 ALA n 1 55 THR n 1 56 GLY n 1 57 LYS n 1 58 ALA n 1 59 ASP n 1 60 PHE n 1 61 GLY n 1 62 ILE n 1 63 SER n 1 64 TYR n 1 65 GLN n 1 66 GLU n 1 67 GLN n 1 68 VAL n 1 69 THR n 1 70 TYR n 1 71 ALA n 1 72 LYS n 1 73 THR n 1 74 SER n 1 75 GLU n 1 76 ASP n 1 77 PRO n 1 78 LEU n 1 79 PRO n 1 80 ILE n 1 81 LYS n 1 82 ALA n 1 83 VAL n 1 84 ALA n 1 85 THR n 1 86 VAL n 1 87 ILE n 1 88 GLN n 1 89 HIS n 1 90 ASN n 1 91 THR n 1 92 SER n 1 93 GLY n 1 94 PHE n 1 95 ALA n 1 96 SER n 1 97 PRO n 1 98 LYS n 1 99 GLU n 1 100 LYS n 1 101 ASN n 1 102 ILE n 1 103 THR n 1 104 THR n 1 105 ALA n 1 106 LYS n 1 107 ASP n 1 108 PHE n 1 109 GLU n 1 110 GLY n 1 111 LYS n 1 112 THR n 1 113 TYR n 1 114 GLY n 1 115 GLY n 1 116 TRP n 1 117 GLY n 1 118 SER n 1 119 PRO n 1 120 SER n 1 121 GLU n 1 122 GLU n 1 123 ALA n 1 124 VAL n 1 125 PHE n 1 126 LYS n 1 127 ALA n 1 128 VAL n 1 129 MSE n 1 130 LYS n 1 131 LYS n 1 132 ASN n 1 133 ARG n 1 134 ALA n 1 135 ASP n 1 136 PHE n 1 137 ASN n 1 138 LYS n 1 139 LEU n 1 140 LYS n 1 141 ILE n 1 142 VAL n 1 143 ASN n 1 144 THR n 1 145 GLY n 1 146 GLN n 1 147 ASP n 1 148 ASP n 1 149 PHE n 1 150 PHE n 1 151 ALA n 1 152 ALA n 1 153 MSE n 1 154 LYS n 1 155 THR n 1 156 VAL n 1 157 ASP n 1 158 PHE n 1 159 ALA n 1 160 TRP n 1 161 ILE n 1 162 PHE n 1 163 GLU n 1 164 GLY n 1 165 TRP n 1 166 ASP n 1 167 ALA n 1 168 VAL n 1 169 LYS n 1 170 ALA n 1 171 ASP n 1 172 LEU n 1 173 ILE n 1 174 GLY n 1 175 TYR n 1 176 ASP n 1 177 LEU n 1 178 ASN n 1 179 PHE n 1 180 ILE n 1 181 PRO n 1 182 VAL n 1 183 LYS n 1 184 ASP n 1 185 LEU n 1 186 ASP n 1 187 GLU n 1 188 ARG n 1 189 LEU n 1 190 ASP n 1 191 TYR n 1 192 TYR n 1 193 THR n 1 194 PRO n 1 195 LEU n 1 196 ILE n 1 197 ILE n 1 198 SER n 1 199 ASN n 1 200 GLU n 1 201 THR n 1 202 VAL n 1 203 LEU n 1 204 LYS n 1 205 ASP n 1 206 ASN n 1 207 PRO n 1 208 GLU n 1 209 LEU n 1 210 ALA n 1 211 LYS n 1 212 LYS n 1 213 PHE n 1 214 LEU n 1 215 LYS n 1 216 ALA n 1 217 THR n 1 218 THR n 1 219 LYS n 1 220 GLY n 1 221 TYR n 1 222 GLU n 1 223 TYR n 1 224 ALA n 1 225 ILE n 1 226 LYS n 1 227 ASN n 1 228 PRO n 1 229 GLU n 1 230 GLU n 1 231 SER n 1 232 ALA n 1 233 LYS n 1 234 ILE n 1 235 LEU n 1 236 VAL n 1 237 LYS n 1 238 HIS n 1 239 ALA n 1 240 PRO n 1 241 GLU n 1 242 VAL n 1 243 ASP n 1 244 GLU n 1 245 LYS n 1 246 LEU n 1 247 ALA n 1 248 LEU n 1 249 LYS n 1 250 SER n 1 251 GLN n 1 252 GLU n 1 253 TYR n 1 254 LEU n 1 255 ALA n 1 256 SER n 1 257 LYS n 1 258 TYR n 1 259 LYS n 1 260 ASP n 1 261 ASP n 1 262 ALA n 1 263 PRO n 1 264 ARG n 1 265 TRP n 1 266 GLY n 1 267 GLU n 1 268 MSE n 1 269 LYS n 1 270 ASP n 1 271 SER n 1 272 VAL n 1 273 TRP n 1 274 ASN n 1 275 ASN n 1 276 TYR n 1 277 THR n 1 278 SER n 1 279 PHE n 1 280 LEU n 1 281 LYS n 1 282 GLU n 1 283 TYR n 1 284 LYS n 1 285 LEU n 1 286 ILE n 1 287 ASP n 1 288 LYS n 1 289 ASP n 1 290 MSE n 1 291 LYS n 1 292 ALA n 1 293 SER n 1 294 ASP n 1 295 ALA n 1 296 TYR n 1 297 THR n 1 298 ASN n 1 299 GLU n 1 300 PHE n 1 301 LEU n 1 302 PRO n 1 303 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CD630_19790 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 630 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium difficile' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272563 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21DE3 gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q187U0_CLOD6 _struct_ref.pdbx_db_accession Q187U0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SSKKVTMVLDWTPNTNHTGLFVALDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGISYQEQVTYAKTSEDPLPIKAV ATVIQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRADFNKLKIVNTGQDDFFAAMKTVDFAWIFE GWDAVKADLIGYDLNFIPVKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNPEESAKILVKHAPEVD EKLALKSQEYLASKYKDDAPRWGEMKDSVWNNYTSFLKEYKLIDKDMKASDAYTNEFLPQ ; _struct_ref.pdbx_align_begin 38 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NMY A 4 ? 303 ? Q187U0 38 ? 337 ? 2 301 2 1 4NMY B 4 ? 303 ? Q187U0 38 ? 337 ? 2 301 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NMY SER A 1 ? UNP Q187U0 ? ? 'EXPRESSION TAG' -1 1 1 4NMY ASN A 2 ? UNP Q187U0 ? ? 'EXPRESSION TAG' 0 2 1 4NMY ALA A 3 ? UNP Q187U0 ? ? 'EXPRESSION TAG' 1 3 2 4NMY SER B 1 ? UNP Q187U0 ? ? 'EXPRESSION TAG' -1 4 2 4NMY ASN B 2 ? UNP Q187U0 ? ? 'EXPRESSION TAG' 0 5 2 4NMY ALA B 3 ? UNP Q187U0 ? ? 'EXPRESSION TAG' 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VIB non-polymer . '3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM' 'THIAMIN, VITAMIN B1' 'C12 H17 N4 O S 1' 265.355 # _exptl.entry_id 4NMY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '1.2 M ammonium sulfate, 0.1 M sodium succinate pH7.5, 0.96 % LDAO, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-11-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97927 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97927 # _reflns.entry_id 4NMY _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.90 _reflns.number_obs 47478 _reflns.number_all 47478 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.B_iso_Wilson_estimate 19.33 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.581 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2273 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NMY _refine.ls_number_reflns_obs 46934 _refine.ls_number_reflns_all 46934 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.433 _refine.ls_d_res_high 1.896 _refine.ls_percent_reflns_obs 98.25 _refine.ls_R_factor_obs 0.166 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.164 _refine.ls_R_factor_R_free 0.203 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.05 _refine.ls_number_reflns_R_free 2368 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.25 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model mixed _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.pdbx_overall_phase_error 19.48 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4766 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 419 _refine_hist.number_atoms_total 5221 _refine_hist.d_res_high 1.896 _refine_hist.d_res_low 38.433 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.008 ? ? 4918 ? 'X-RAY DIFFRACTION' f_angle_d 1.097 ? ? 6662 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.376 ? ? 1816 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.077 ? ? 718 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 848 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.8965 1.9352 2089 0.2180 80.00 0.2671 . . 118 . . 2207 . 'X-RAY DIFFRACTION' . 1.9352 1.9772 2493 0.2100 96.00 0.2795 . . 155 . . 2648 . 'X-RAY DIFFRACTION' . 1.9772 2.0232 2596 0.1972 99.00 0.2631 . . 135 . . 2731 . 'X-RAY DIFFRACTION' . 2.0232 2.0738 2619 0.1900 99.00 0.3029 . . 130 . . 2749 . 'X-RAY DIFFRACTION' . 2.0738 2.1299 2610 0.1878 100.00 0.2460 . . 144 . . 2754 . 'X-RAY DIFFRACTION' . 2.1299 2.1926 2640 0.1791 99.00 0.2261 . . 132 . . 2772 . 'X-RAY DIFFRACTION' . 2.1926 2.2633 2607 0.1739 99.00 0.2427 . . 156 . . 2713 . 'X-RAY DIFFRACTION' . 2.2633 2.3442 2659 0.1731 100.00 0.1966 . . 126 . . 2785 . 'X-RAY DIFFRACTION' . 2.3442 2.4381 2615 0.1722 100.00 0.2164 . . 140 . . 2755 . 'X-RAY DIFFRACTION' . 2.4381 2.5490 2669 0.1679 100.00 0.2102 . . 124 . . 2793 . 'X-RAY DIFFRACTION' . 2.5490 2.6833 2662 0.1710 100.00 0.2484 . . 134 . . 2796 . 'X-RAY DIFFRACTION' . 2.6833 2.8514 2679 0.1744 100.00 0.2297 . . 132 . . 2811 . 'X-RAY DIFFRACTION' . 2.8514 3.0715 2698 0.1724 100.00 0.1801 . . 129 . . 2827 . 'X-RAY DIFFRACTION' . 3.0715 3.3804 2662 0.1733 100.00 0.1991 . . 157 . . 2819 . 'X-RAY DIFFRACTION' . 3.3804 3.8692 2719 0.1527 100.00 0.1932 . . 135 . . 2854 . 'X-RAY DIFFRACTION' . 3.8692 4.8732 2714 0.1245 100.00 0.1515 . . 161 . . 2875 . 'X-RAY DIFFRACTION' . 4.8732 38.4414 2835 0.1415 99.00 0.1532 . . 160 . . 2995 . 'X-RAY DIFFRACTION' # _struct.entry_id 4NMY _struct.title 'Crystal Structure of the Thiamin-bound form of Substrate-binding Protein of ABC Transporter from Clostridium difficile' _struct.pdbx_descriptor 'ABC-type transport system, extracellular solute-binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NMY _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, alpha-beta structure, SBP fold, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 17 ? ASN A 19 ? ASN A 15 ASN A 17 5 ? 3 HELX_P HELX_P2 2 HIS A 20 ? LYS A 29 ? HIS A 18 LYS A 27 1 ? 10 HELX_P HELX_P3 3 GLY A 30 ? GLU A 35 ? GLY A 28 GLU A 33 1 ? 6 HELX_P HELX_P4 4 GLY A 48 ? THR A 55 ? GLY A 46 THR A 53 1 ? 8 HELX_P HELX_P5 5 TYR A 64 ? SER A 74 ? TYR A 62 SER A 72 1 ? 11 HELX_P HELX_P6 6 GLU A 99 ? ASN A 101 ? GLU A 97 ASN A 99 5 ? 3 HELX_P HELX_P7 7 THR A 104 ? GLU A 109 ? THR A 102 GLU A 107 5 ? 6 HELX_P HELX_P8 8 SER A 118 ? ASN A 132 ? SER A 116 ASN A 130 1 ? 15 HELX_P HELX_P9 9 ASP A 135 ? LEU A 139 ? ASP A 133 LEU A 137 5 ? 5 HELX_P HELX_P10 10 ASP A 148 ? MSE A 153 ? ASP A 146 MSE A 151 1 ? 6 HELX_P HELX_P11 11 TRP A 165 ? GLY A 174 ? TRP A 163 GLY A 172 1 ? 10 HELX_P HELX_P12 12 VAL A 182 ? ASP A 186 ? VAL A 180 ASP A 184 1 ? 5 HELX_P HELX_P13 13 GLU A 187 ? ASP A 190 ? GLU A 185 ASP A 188 5 ? 4 HELX_P HELX_P14 14 GLU A 200 ? ASN A 206 ? GLU A 198 ASN A 204 1 ? 7 HELX_P HELX_P15 15 ASN A 206 ? ASN A 227 ? ASN A 204 ASN A 225 1 ? 22 HELX_P HELX_P16 16 ASN A 227 ? ALA A 239 ? ASN A 225 ALA A 237 1 ? 13 HELX_P HELX_P17 17 ASP A 243 ? SER A 256 ? ASP A 241 SER A 254 1 ? 14 HELX_P HELX_P18 18 LYS A 269 ? TYR A 283 ? LYS A 267 TYR A 281 1 ? 15 HELX_P HELX_P19 19 LYS A 291 ? TYR A 296 ? LYS A 289 TYR A 294 1 ? 6 HELX_P HELX_P20 20 ASN B 17 ? ASN B 19 ? ASN B 15 ASN B 17 5 ? 3 HELX_P HELX_P21 21 HIS B 20 ? LYS B 29 ? HIS B 18 LYS B 27 1 ? 10 HELX_P HELX_P22 22 GLY B 30 ? GLU B 35 ? GLY B 28 GLU B 33 1 ? 6 HELX_P HELX_P23 23 GLY B 48 ? THR B 55 ? GLY B 46 THR B 53 1 ? 8 HELX_P HELX_P24 24 TYR B 64 ? SER B 74 ? TYR B 62 SER B 72 1 ? 11 HELX_P HELX_P25 25 GLU B 99 ? ASN B 101 ? GLU B 97 ASN B 99 5 ? 3 HELX_P HELX_P26 26 THR B 104 ? GLU B 109 ? THR B 102 GLU B 107 5 ? 6 HELX_P HELX_P27 27 SER B 118 ? ASN B 132 ? SER B 116 ASN B 130 1 ? 15 HELX_P HELX_P28 28 ASP B 135 ? LEU B 139 ? ASP B 133 LEU B 137 5 ? 5 HELX_P HELX_P29 29 ASP B 148 ? MSE B 153 ? ASP B 146 MSE B 151 1 ? 6 HELX_P HELX_P30 30 TRP B 165 ? GLY B 174 ? TRP B 163 GLY B 172 1 ? 10 HELX_P HELX_P31 31 VAL B 182 ? ASP B 186 ? VAL B 180 ASP B 184 1 ? 5 HELX_P HELX_P32 32 GLU B 187 ? ASP B 190 ? GLU B 185 ASP B 188 5 ? 4 HELX_P HELX_P33 33 GLU B 200 ? ASN B 206 ? GLU B 198 ASN B 204 1 ? 7 HELX_P HELX_P34 34 ASN B 206 ? ASN B 227 ? ASN B 204 ASN B 225 1 ? 22 HELX_P HELX_P35 35 ASN B 227 ? ALA B 239 ? ASN B 225 ALA B 237 1 ? 13 HELX_P HELX_P36 36 ASP B 243 ? SER B 256 ? ASP B 241 SER B 254 1 ? 14 HELX_P HELX_P37 37 LYS B 269 ? TYR B 283 ? LYS B 267 TYR B 281 1 ? 15 HELX_P HELX_P38 38 LYS B 291 ? TYR B 296 ? LYS B 289 TYR B 294 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 9 C ? ? ? 1_555 A MSE 10 N ? ? A THR 7 A MSE 8 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 10 C ? ? ? 1_555 A VAL 11 N ? ? A MSE 8 A VAL 9 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A VAL 128 C ? ? ? 1_555 A MSE 129 N ? ? A VAL 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 129 C ? ? ? 1_555 A LYS 130 N ? ? A MSE 127 A LYS 128 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A ALA 152 C ? ? ? 1_555 A MSE 153 N ? ? A ALA 150 A MSE 151 1_555 ? ? ? ? ? ? ? 1.334 ? covale6 covale ? ? A MSE 153 C ? ? ? 1_555 A LYS 154 N ? ? A MSE 151 A LYS 152 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? A GLU 267 C ? ? ? 1_555 A MSE 268 N ? ? A GLU 265 A MSE 266 1_555 ? ? ? ? ? ? ? 1.335 ? covale8 covale ? ? A MSE 268 C ? ? ? 1_555 A LYS 269 N ? ? A MSE 266 A LYS 267 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A ASP 289 C ? ? ? 1_555 A MSE 290 N ? ? A ASP 287 A MSE 288 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 290 C ? ? ? 1_555 A LYS 291 N ? ? A MSE 288 A LYS 289 1_555 ? ? ? ? ? ? ? 1.328 ? covale11 covale ? ? B THR 9 C ? ? ? 1_555 B MSE 10 N ? ? B THR 7 B MSE 8 1_555 ? ? ? ? ? ? ? 1.332 ? covale12 covale ? ? B MSE 10 C ? ? ? 1_555 B VAL 11 N ? ? B MSE 8 B VAL 9 1_555 ? ? ? ? ? ? ? 1.331 ? covale13 covale ? ? B VAL 128 C ? ? ? 1_555 B MSE 129 N ? ? B VAL 126 B MSE 127 1_555 ? ? ? ? ? ? ? 1.326 ? covale14 covale ? ? B MSE 129 C ? ? ? 1_555 B LYS 130 N ? ? B MSE 127 B LYS 128 1_555 ? ? ? ? ? ? ? 1.333 ? covale15 covale ? ? B ALA 152 C ? ? ? 1_555 B MSE 153 N ? ? B ALA 150 B MSE 151 1_555 ? ? ? ? ? ? ? 1.326 ? covale16 covale ? ? B MSE 153 C ? ? ? 1_555 B LYS 154 N ? ? B MSE 151 B LYS 152 1_555 ? ? ? ? ? ? ? 1.327 ? covale17 covale ? ? B GLU 267 C ? ? ? 1_555 B MSE 268 N ? ? B GLU 265 B MSE 266 1_555 ? ? ? ? ? ? ? 1.329 ? covale18 covale ? ? B MSE 268 C ? ? ? 1_555 B LYS 269 N ? ? B MSE 266 B LYS 267 1_555 ? ? ? ? ? ? ? 1.327 ? covale19 covale ? ? B ASP 289 C ? ? ? 1_555 B MSE 290 N ? ? B ASP 287 B MSE 288 1_555 ? ? ? ? ? ? ? 1.324 ? covale20 covale ? ? B MSE 290 C ? ? ? 1_555 B LYS 291 N ? ? B MSE 288 B LYS 289 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 193 A . ? THR 191 A PRO 194 A ? PRO 192 A 1 -3.80 2 THR 193 B . ? THR 191 B PRO 194 B ? PRO 192 B 1 -4.37 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 2 ? D ? 5 ? E ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? parallel E 2 3 ? parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 37 ? VAL A 42 ? LEU A 35 VAL A 40 A 2 LYS A 6 ? VAL A 11 ? LYS A 4 VAL A 9 A 3 PHE A 60 ? SER A 63 ? PHE A 58 SER A 61 A 4 LEU A 195 ? ASN A 199 ? LEU A 193 ASN A 197 A 5 ILE A 80 ? THR A 85 ? ILE A 78 THR A 83 B 1 ALA A 159 ? PHE A 162 ? ALA A 157 PHE A 160 B 2 SER A 92 ? PRO A 97 ? SER A 90 PRO A 95 B 3 LEU A 177 ? PRO A 181 ? LEU A 175 PRO A 179 C 1 THR A 112 ? GLY A 115 ? THR A 110 GLY A 113 C 2 LYS A 140 ? ASN A 143 ? LYS A 138 ASN A 141 D 1 LEU B 37 ? VAL B 42 ? LEU B 35 VAL B 40 D 2 LYS B 6 ? VAL B 11 ? LYS B 4 VAL B 9 D 3 PHE B 60 ? SER B 63 ? PHE B 58 SER B 61 D 4 LEU B 195 ? ASN B 199 ? LEU B 193 ASN B 197 D 5 ILE B 80 ? THR B 85 ? ILE B 78 THR B 83 E 1 LYS B 140 ? ASN B 143 ? LYS B 138 ASN B 141 E 2 THR B 112 ? GLY B 115 ? THR B 110 GLY B 113 E 3 PHE B 158 ? PHE B 162 ? PHE B 156 PHE B 160 E 4 SER B 92 ? PRO B 97 ? SER B 90 PRO B 95 E 5 LEU B 177 ? PRO B 181 ? LEU B 175 PRO B 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 38 ? O ASP A 36 N LYS A 6 ? N LYS A 4 A 2 3 N VAL A 11 ? N VAL A 9 O PHE A 60 ? O PHE A 58 A 3 4 N SER A 63 ? N SER A 61 O LEU A 195 ? O LEU A 193 A 4 5 O ILE A 196 ? O ILE A 194 N ALA A 84 ? N ALA A 82 B 1 2 O ILE A 161 ? O ILE A 159 N GLY A 93 ? N GLY A 91 B 2 3 N SER A 96 ? N SER A 94 O ASN A 178 ? O ASN A 176 C 1 2 N TYR A 113 ? N TYR A 111 O LYS A 140 ? O LYS A 138 D 1 2 O ASP B 38 ? O ASP B 36 N LYS B 6 ? N LYS B 4 D 2 3 N VAL B 11 ? N VAL B 9 O PHE B 60 ? O PHE B 58 D 3 4 N SER B 63 ? N SER B 61 O LEU B 195 ? O LEU B 193 D 4 5 O ILE B 196 ? O ILE B 194 N ALA B 84 ? N ALA B 82 E 1 2 O LYS B 140 ? O LYS B 138 N TYR B 113 ? N TYR B 111 E 2 3 N GLY B 114 ? N GLY B 112 O PHE B 158 ? O PHE B 156 E 3 4 O ILE B 161 ? O ILE B 159 N GLY B 93 ? N GLY B 91 E 4 5 N PHE B 94 ? N PHE B 92 O ILE B 180 ? O ILE B 178 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE VIB A 401' AC2 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE VIB B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 TRP A 14 ? TRP A 12 . ? 1_555 ? 2 AC1 14 ASN A 17 ? ASN A 15 . ? 1_555 ? 3 AC1 14 TYR A 64 ? TYR A 62 . ? 1_555 ? 4 AC1 14 GLU A 66 ? GLU A 64 . ? 1_555 ? 5 AC1 14 SER A 92 ? SER A 90 . ? 1_555 ? 6 AC1 14 TRP A 116 ? TRP A 114 . ? 1_555 ? 7 AC1 14 TRP A 160 ? TRP A 158 . ? 1_555 ? 8 AC1 14 ILE A 161 ? ILE A 159 . ? 1_555 ? 9 AC1 14 PHE A 162 ? PHE A 160 . ? 1_555 ? 10 AC1 14 TYR A 191 ? TYR A 189 . ? 1_555 ? 11 AC1 14 THR A 193 ? THR A 191 . ? 1_555 ? 12 AC1 14 HOH E . ? HOH A 503 . ? 1_555 ? 13 AC1 14 HOH E . ? HOH A 505 . ? 1_555 ? 14 AC1 14 HOH E . ? HOH A 509 . ? 1_555 ? 15 AC2 16 TRP B 14 ? TRP B 12 . ? 1_555 ? 16 AC2 16 ASN B 17 ? ASN B 15 . ? 1_555 ? 17 AC2 16 TYR B 64 ? TYR B 62 . ? 1_555 ? 18 AC2 16 GLU B 66 ? GLU B 64 . ? 1_555 ? 19 AC2 16 SER B 92 ? SER B 90 . ? 1_555 ? 20 AC2 16 TRP B 116 ? TRP B 114 . ? 1_555 ? 21 AC2 16 TRP B 160 ? TRP B 158 . ? 1_555 ? 22 AC2 16 ILE B 161 ? ILE B 159 . ? 1_555 ? 23 AC2 16 PHE B 162 ? PHE B 160 . ? 1_555 ? 24 AC2 16 TRP B 165 ? TRP B 163 . ? 1_555 ? 25 AC2 16 TYR B 191 ? TYR B 189 . ? 1_555 ? 26 AC2 16 THR B 193 ? THR B 191 . ? 1_555 ? 27 AC2 16 HOH F . ? HOH B 501 . ? 1_555 ? 28 AC2 16 HOH F . ? HOH B 507 . ? 1_555 ? 29 AC2 16 HOH F . ? HOH B 511 . ? 1_555 ? 30 AC2 16 HOH F . ? HOH B 705 . ? 1_555 ? # _database_PDB_matrix.entry_id 4NMY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NMY _atom_sites.fract_transf_matrix[1][1] 0.020190 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013009 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006456 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 ? ? ? A . n A 1 2 ASN 2 0 ? ? ? A . n A 1 3 ALA 3 1 ? ? ? A . n A 1 4 SER 4 2 ? ? ? A . n A 1 5 SER 5 3 3 SER SER A . n A 1 6 LYS 6 4 4 LYS LYS A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 VAL 8 6 6 VAL VAL A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 MSE 10 8 8 MSE MSE A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 LEU 12 10 10 LEU LEU A . n A 1 13 ASP 13 11 11 ASP ASP A . n A 1 14 TRP 14 12 12 TRP TRP A . n A 1 15 THR 15 13 13 THR THR A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ASN 17 15 15 ASN ASN A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 ASN 19 17 17 ASN ASN A . n A 1 20 HIS 20 18 18 HIS HIS A . n A 1 21 THR 21 19 19 THR THR A . n A 1 22 GLY 22 20 20 GLY GLY A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 PHE 24 22 22 PHE PHE A . n A 1 25 VAL 25 23 23 VAL VAL A . n A 1 26 ALA 26 24 24 ALA ALA A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 ASP 28 26 26 ASP ASP A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 TYR 31 29 29 TYR TYR A . n A 1 32 TYR 32 30 30 TYR TYR A . n A 1 33 LYS 33 31 31 LYS LYS A . n A 1 34 GLU 34 32 32 GLU GLU A . n A 1 35 GLU 35 33 33 GLU GLU A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 LEU 37 35 35 LEU LEU A . n A 1 38 ASP 38 36 36 ASP ASP A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 GLU 40 38 38 GLU GLU A . n A 1 41 ILE 41 39 39 ILE ILE A . n A 1 42 VAL 42 40 40 VAL VAL A . n A 1 43 GLN 43 41 41 GLN GLN A . n A 1 44 PRO 44 42 42 PRO PRO A . n A 1 45 PRO 45 43 43 PRO PRO A . n A 1 46 GLU 46 44 44 GLU GLU A . n A 1 47 SER 47 45 45 SER SER A . n A 1 48 GLY 48 46 46 GLY GLY A . n A 1 49 ALA 49 47 47 ALA ALA A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 LEU 52 50 50 LEU LEU A . n A 1 53 VAL 53 51 51 VAL VAL A . n A 1 54 ALA 54 52 52 ALA ALA A . n A 1 55 THR 55 53 53 THR THR A . n A 1 56 GLY 56 54 54 GLY GLY A . n A 1 57 LYS 57 55 55 LYS LYS A . n A 1 58 ALA 58 56 56 ALA ALA A . n A 1 59 ASP 59 57 57 ASP ASP A . n A 1 60 PHE 60 58 58 PHE PHE A . n A 1 61 GLY 61 59 59 GLY GLY A . n A 1 62 ILE 62 60 60 ILE ILE A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 TYR 64 62 62 TYR TYR A . n A 1 65 GLN 65 63 63 GLN GLN A . n A 1 66 GLU 66 64 64 GLU GLU A . n A 1 67 GLN 67 65 65 GLN GLN A . n A 1 68 VAL 68 66 66 VAL VAL A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 TYR 70 68 68 TYR TYR A . n A 1 71 ALA 71 69 69 ALA ALA A . n A 1 72 LYS 72 70 70 LYS LYS A . n A 1 73 THR 73 71 71 THR THR A . n A 1 74 SER 74 72 72 SER SER A . n A 1 75 GLU 75 73 73 GLU GLU A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 PRO 77 75 75 PRO PRO A . n A 1 78 LEU 78 76 76 LEU LEU A . n A 1 79 PRO 79 77 77 PRO PRO A . n A 1 80 ILE 80 78 78 ILE ILE A . n A 1 81 LYS 81 79 79 LYS LYS A . n A 1 82 ALA 82 80 80 ALA ALA A . n A 1 83 VAL 83 81 81 VAL VAL A . n A 1 84 ALA 84 82 82 ALA ALA A . n A 1 85 THR 85 83 83 THR THR A . n A 1 86 VAL 86 84 84 VAL VAL A . n A 1 87 ILE 87 85 85 ILE ILE A . n A 1 88 GLN 88 86 86 GLN GLN A . n A 1 89 HIS 89 87 87 HIS HIS A . n A 1 90 ASN 90 88 88 ASN ASN A . n A 1 91 THR 91 89 89 THR THR A . n A 1 92 SER 92 90 90 SER SER A . n A 1 93 GLY 93 91 91 GLY GLY A . n A 1 94 PHE 94 92 92 PHE PHE A . n A 1 95 ALA 95 93 93 ALA ALA A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 PRO 97 95 95 PRO PRO A . n A 1 98 LYS 98 96 96 LYS LYS A . n A 1 99 GLU 99 97 97 GLU GLU A . n A 1 100 LYS 100 98 98 LYS LYS A . n A 1 101 ASN 101 99 99 ASN ASN A . n A 1 102 ILE 102 100 100 ILE ILE A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 THR 104 102 102 THR THR A . n A 1 105 ALA 105 103 103 ALA ALA A . n A 1 106 LYS 106 104 104 LYS LYS A . n A 1 107 ASP 107 105 105 ASP ASP A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 GLU 109 107 107 GLU GLU A . n A 1 110 GLY 110 108 108 GLY GLY A . n A 1 111 LYS 111 109 109 LYS LYS A . n A 1 112 THR 112 110 110 THR THR A . n A 1 113 TYR 113 111 111 TYR TYR A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 GLY 115 113 113 GLY GLY A . n A 1 116 TRP 116 114 114 TRP TRP A . n A 1 117 GLY 117 115 115 GLY GLY A . n A 1 118 SER 118 116 116 SER SER A . n A 1 119 PRO 119 117 117 PRO PRO A . n A 1 120 SER 120 118 118 SER SER A . n A 1 121 GLU 121 119 119 GLU GLU A . n A 1 122 GLU 122 120 120 GLU GLU A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 VAL 124 122 122 VAL VAL A . n A 1 125 PHE 125 123 123 PHE PHE A . n A 1 126 LYS 126 124 124 LYS LYS A . n A 1 127 ALA 127 125 125 ALA ALA A . n A 1 128 VAL 128 126 126 VAL VAL A . n A 1 129 MSE 129 127 127 MSE MSE A . n A 1 130 LYS 130 128 128 LYS LYS A . n A 1 131 LYS 131 129 129 LYS LYS A . n A 1 132 ASN 132 130 130 ASN ASN A . n A 1 133 ARG 133 131 131 ARG ARG A . n A 1 134 ALA 134 132 132 ALA ALA A . n A 1 135 ASP 135 133 133 ASP ASP A . n A 1 136 PHE 136 134 134 PHE PHE A . n A 1 137 ASN 137 135 135 ASN ASN A . n A 1 138 LYS 138 136 136 LYS LYS A . n A 1 139 LEU 139 137 137 LEU LEU A . n A 1 140 LYS 140 138 138 LYS LYS A . n A 1 141 ILE 141 139 139 ILE ILE A . n A 1 142 VAL 142 140 140 VAL VAL A . n A 1 143 ASN 143 141 141 ASN ASN A . n A 1 144 THR 144 142 142 THR THR A . n A 1 145 GLY 145 143 143 GLY GLY A . n A 1 146 GLN 146 144 144 GLN GLN A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 ASP 148 146 146 ASP ASP A . n A 1 149 PHE 149 147 147 PHE PHE A . n A 1 150 PHE 150 148 148 PHE PHE A . n A 1 151 ALA 151 149 149 ALA ALA A . n A 1 152 ALA 152 150 150 ALA ALA A . n A 1 153 MSE 153 151 151 MSE MSE A . n A 1 154 LYS 154 152 152 LYS LYS A . n A 1 155 THR 155 153 153 THR THR A . n A 1 156 VAL 156 154 154 VAL VAL A . n A 1 157 ASP 157 155 155 ASP ASP A . n A 1 158 PHE 158 156 156 PHE PHE A . n A 1 159 ALA 159 157 157 ALA ALA A . n A 1 160 TRP 160 158 158 TRP TRP A . n A 1 161 ILE 161 159 159 ILE ILE A . n A 1 162 PHE 162 160 160 PHE PHE A . n A 1 163 GLU 163 161 161 GLU GLU A . n A 1 164 GLY 164 162 162 GLY GLY A . n A 1 165 TRP 165 163 163 TRP TRP A . n A 1 166 ASP 166 164 164 ASP ASP A . n A 1 167 ALA 167 165 165 ALA ALA A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 ALA 170 168 168 ALA ALA A . n A 1 171 ASP 171 169 169 ASP ASP A . n A 1 172 LEU 172 170 170 LEU LEU A . n A 1 173 ILE 173 171 171 ILE ILE A . n A 1 174 GLY 174 172 172 GLY GLY A . n A 1 175 TYR 175 173 173 TYR TYR A . n A 1 176 ASP 176 174 174 ASP ASP A . n A 1 177 LEU 177 175 175 LEU LEU A . n A 1 178 ASN 178 176 176 ASN ASN A . n A 1 179 PHE 179 177 177 PHE PHE A . n A 1 180 ILE 180 178 178 ILE ILE A . n A 1 181 PRO 181 179 179 PRO PRO A . n A 1 182 VAL 182 180 180 VAL VAL A . n A 1 183 LYS 183 181 181 LYS LYS A . n A 1 184 ASP 184 182 182 ASP ASP A . n A 1 185 LEU 185 183 183 LEU LEU A . n A 1 186 ASP 186 184 184 ASP ASP A . n A 1 187 GLU 187 185 185 GLU GLU A . n A 1 188 ARG 188 186 186 ARG ARG A . n A 1 189 LEU 189 187 187 LEU LEU A . n A 1 190 ASP 190 188 188 ASP ASP A . n A 1 191 TYR 191 189 189 TYR TYR A . n A 1 192 TYR 192 190 190 TYR TYR A . n A 1 193 THR 193 191 191 THR THR A . n A 1 194 PRO 194 192 192 PRO PRO A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 ILE 196 194 194 ILE ILE A . n A 1 197 ILE 197 195 195 ILE ILE A . n A 1 198 SER 198 196 196 SER SER A . n A 1 199 ASN 199 197 197 ASN ASN A . n A 1 200 GLU 200 198 198 GLU GLU A . n A 1 201 THR 201 199 199 THR THR A . n A 1 202 VAL 202 200 200 VAL VAL A . n A 1 203 LEU 203 201 201 LEU LEU A . n A 1 204 LYS 204 202 202 LYS LYS A . n A 1 205 ASP 205 203 203 ASP ASP A . n A 1 206 ASN 206 204 204 ASN ASN A . n A 1 207 PRO 207 205 205 PRO PRO A . n A 1 208 GLU 208 206 206 GLU GLU A . n A 1 209 LEU 209 207 207 LEU LEU A . n A 1 210 ALA 210 208 208 ALA ALA A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 LYS 212 210 210 LYS LYS A . n A 1 213 PHE 213 211 211 PHE PHE A . n A 1 214 LEU 214 212 212 LEU LEU A . n A 1 215 LYS 215 213 213 LYS LYS A . n A 1 216 ALA 216 214 214 ALA ALA A . n A 1 217 THR 217 215 215 THR THR A . n A 1 218 THR 218 216 216 THR THR A . n A 1 219 LYS 219 217 217 LYS LYS A . n A 1 220 GLY 220 218 218 GLY GLY A . n A 1 221 TYR 221 219 219 TYR TYR A . n A 1 222 GLU 222 220 220 GLU GLU A . n A 1 223 TYR 223 221 221 TYR TYR A . n A 1 224 ALA 224 222 222 ALA ALA A . n A 1 225 ILE 225 223 223 ILE ILE A . n A 1 226 LYS 226 224 224 LYS LYS A . n A 1 227 ASN 227 225 225 ASN ASN A . n A 1 228 PRO 228 226 226 PRO PRO A . n A 1 229 GLU 229 227 227 GLU GLU A . n A 1 230 GLU 230 228 228 GLU GLU A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 ALA 232 230 230 ALA ALA A . n A 1 233 LYS 233 231 231 LYS LYS A . n A 1 234 ILE 234 232 232 ILE ILE A . n A 1 235 LEU 235 233 233 LEU LEU A . n A 1 236 VAL 236 234 234 VAL VAL A . n A 1 237 LYS 237 235 235 LYS LYS A . n A 1 238 HIS 238 236 236 HIS HIS A . n A 1 239 ALA 239 237 237 ALA ALA A . n A 1 240 PRO 240 238 238 PRO PRO A . n A 1 241 GLU 241 239 239 GLU GLU A . n A 1 242 VAL 242 240 240 VAL VAL A . n A 1 243 ASP 243 241 241 ASP ASP A . n A 1 244 GLU 244 242 242 GLU GLU A . n A 1 245 LYS 245 243 243 LYS LYS A . n A 1 246 LEU 246 244 244 LEU LEU A . n A 1 247 ALA 247 245 245 ALA ALA A . n A 1 248 LEU 248 246 246 LEU LEU A . n A 1 249 LYS 249 247 247 LYS LYS A . n A 1 250 SER 250 248 248 SER SER A . n A 1 251 GLN 251 249 249 GLN GLN A . n A 1 252 GLU 252 250 250 GLU GLU A . n A 1 253 TYR 253 251 251 TYR TYR A . n A 1 254 LEU 254 252 252 LEU LEU A . n A 1 255 ALA 255 253 253 ALA ALA A . n A 1 256 SER 256 254 254 SER SER A . n A 1 257 LYS 257 255 255 LYS LYS A . n A 1 258 TYR 258 256 256 TYR TYR A . n A 1 259 LYS 259 257 257 LYS LYS A . n A 1 260 ASP 260 258 258 ASP ASP A . n A 1 261 ASP 261 259 259 ASP ASP A . n A 1 262 ALA 262 260 260 ALA ALA A . n A 1 263 PRO 263 261 261 PRO PRO A . n A 1 264 ARG 264 262 262 ARG ARG A . n A 1 265 TRP 265 263 263 TRP TRP A . n A 1 266 GLY 266 264 264 GLY GLY A . n A 1 267 GLU 267 265 265 GLU GLU A . n A 1 268 MSE 268 266 266 MSE MSE A . n A 1 269 LYS 269 267 267 LYS LYS A . n A 1 270 ASP 270 268 268 ASP ASP A . n A 1 271 SER 271 269 269 SER SER A . n A 1 272 VAL 272 270 270 VAL VAL A . n A 1 273 TRP 273 271 271 TRP TRP A . n A 1 274 ASN 274 272 272 ASN ASN A . n A 1 275 ASN 275 273 273 ASN ASN A . n A 1 276 TYR 276 274 274 TYR TYR A . n A 1 277 THR 277 275 275 THR THR A . n A 1 278 SER 278 276 276 SER SER A . n A 1 279 PHE 279 277 277 PHE PHE A . n A 1 280 LEU 280 278 278 LEU LEU A . n A 1 281 LYS 281 279 279 LYS LYS A . n A 1 282 GLU 282 280 280 GLU GLU A . n A 1 283 TYR 283 281 281 TYR TYR A . n A 1 284 LYS 284 282 282 LYS LYS A . n A 1 285 LEU 285 283 283 LEU LEU A . n A 1 286 ILE 286 284 284 ILE ILE A . n A 1 287 ASP 287 285 285 ASP ASP A . n A 1 288 LYS 288 286 286 LYS LYS A . n A 1 289 ASP 289 287 287 ASP ASP A . n A 1 290 MSE 290 288 288 MSE MSE A . n A 1 291 LYS 291 289 289 LYS LYS A . n A 1 292 ALA 292 290 290 ALA ALA A . n A 1 293 SER 293 291 291 SER SER A . n A 1 294 ASP 294 292 292 ASP ASP A . n A 1 295 ALA 295 293 293 ALA ALA A . n A 1 296 TYR 296 294 294 TYR TYR A . n A 1 297 THR 297 295 295 THR THR A . n A 1 298 ASN 298 296 296 ASN ASN A . n A 1 299 GLU 299 297 297 GLU GLU A . n A 1 300 PHE 300 298 298 PHE PHE A . n A 1 301 LEU 301 299 299 LEU LEU A . n A 1 302 PRO 302 300 300 PRO PRO A . n A 1 303 GLN 303 301 301 GLN GLN A . n B 1 1 SER 1 -1 ? ? ? B . n B 1 2 ASN 2 0 ? ? ? B . n B 1 3 ALA 3 1 ? ? ? B . n B 1 4 SER 4 2 ? ? ? B . n B 1 5 SER 5 3 3 SER SER B . n B 1 6 LYS 6 4 4 LYS LYS B . n B 1 7 LYS 7 5 5 LYS LYS B . n B 1 8 VAL 8 6 6 VAL VAL B . n B 1 9 THR 9 7 7 THR THR B . n B 1 10 MSE 10 8 8 MSE MSE B . n B 1 11 VAL 11 9 9 VAL VAL B . n B 1 12 LEU 12 10 10 LEU LEU B . n B 1 13 ASP 13 11 11 ASP ASP B . n B 1 14 TRP 14 12 12 TRP TRP B . n B 1 15 THR 15 13 13 THR THR B . n B 1 16 PRO 16 14 14 PRO PRO B . n B 1 17 ASN 17 15 15 ASN ASN B . n B 1 18 THR 18 16 16 THR THR B . n B 1 19 ASN 19 17 17 ASN ASN B . n B 1 20 HIS 20 18 18 HIS HIS B . n B 1 21 THR 21 19 19 THR THR B . n B 1 22 GLY 22 20 20 GLY GLY B . n B 1 23 LEU 23 21 21 LEU LEU B . n B 1 24 PHE 24 22 22 PHE PHE B . n B 1 25 VAL 25 23 23 VAL VAL B . n B 1 26 ALA 26 24 24 ALA ALA B . n B 1 27 LEU 27 25 25 LEU LEU B . n B 1 28 ASP 28 26 26 ASP ASP B . n B 1 29 LYS 29 27 27 LYS LYS B . n B 1 30 GLY 30 28 28 GLY GLY B . n B 1 31 TYR 31 29 29 TYR TYR B . n B 1 32 TYR 32 30 30 TYR TYR B . n B 1 33 LYS 33 31 31 LYS LYS B . n B 1 34 GLU 34 32 32 GLU GLU B . n B 1 35 GLU 35 33 33 GLU GLU B . n B 1 36 GLY 36 34 34 GLY GLY B . n B 1 37 LEU 37 35 35 LEU LEU B . n B 1 38 ASP 38 36 36 ASP ASP B . n B 1 39 VAL 39 37 37 VAL VAL B . n B 1 40 GLU 40 38 38 GLU GLU B . n B 1 41 ILE 41 39 39 ILE ILE B . n B 1 42 VAL 42 40 40 VAL VAL B . n B 1 43 GLN 43 41 41 GLN GLN B . n B 1 44 PRO 44 42 42 PRO PRO B . n B 1 45 PRO 45 43 43 PRO PRO B . n B 1 46 GLU 46 44 44 GLU GLU B . n B 1 47 SER 47 45 45 SER SER B . n B 1 48 GLY 48 46 46 GLY GLY B . n B 1 49 ALA 49 47 47 ALA ALA B . n B 1 50 GLU 50 48 48 GLU GLU B . n B 1 51 THR 51 49 49 THR THR B . n B 1 52 LEU 52 50 50 LEU LEU B . n B 1 53 VAL 53 51 51 VAL VAL B . n B 1 54 ALA 54 52 52 ALA ALA B . n B 1 55 THR 55 53 53 THR THR B . n B 1 56 GLY 56 54 54 GLY GLY B . n B 1 57 LYS 57 55 55 LYS LYS B . n B 1 58 ALA 58 56 56 ALA ALA B . n B 1 59 ASP 59 57 57 ASP ASP B . n B 1 60 PHE 60 58 58 PHE PHE B . n B 1 61 GLY 61 59 59 GLY GLY B . n B 1 62 ILE 62 60 60 ILE ILE B . n B 1 63 SER 63 61 61 SER SER B . n B 1 64 TYR 64 62 62 TYR TYR B . n B 1 65 GLN 65 63 63 GLN GLN B . n B 1 66 GLU 66 64 64 GLU GLU B . n B 1 67 GLN 67 65 65 GLN GLN B . n B 1 68 VAL 68 66 66 VAL VAL B . n B 1 69 THR 69 67 67 THR THR B . n B 1 70 TYR 70 68 68 TYR TYR B . n B 1 71 ALA 71 69 69 ALA ALA B . n B 1 72 LYS 72 70 70 LYS LYS B . n B 1 73 THR 73 71 71 THR THR B . n B 1 74 SER 74 72 72 SER SER B . n B 1 75 GLU 75 73 73 GLU GLU B . n B 1 76 ASP 76 74 74 ASP ASP B . n B 1 77 PRO 77 75 75 PRO PRO B . n B 1 78 LEU 78 76 76 LEU LEU B . n B 1 79 PRO 79 77 77 PRO PRO B . n B 1 80 ILE 80 78 78 ILE ILE B . n B 1 81 LYS 81 79 79 LYS LYS B . n B 1 82 ALA 82 80 80 ALA ALA B . n B 1 83 VAL 83 81 81 VAL VAL B . n B 1 84 ALA 84 82 82 ALA ALA B . n B 1 85 THR 85 83 83 THR THR B . n B 1 86 VAL 86 84 84 VAL VAL B . n B 1 87 ILE 87 85 85 ILE ILE B . n B 1 88 GLN 88 86 86 GLN GLN B . n B 1 89 HIS 89 87 87 HIS HIS B . n B 1 90 ASN 90 88 88 ASN ASN B . n B 1 91 THR 91 89 89 THR THR B . n B 1 92 SER 92 90 90 SER SER B . n B 1 93 GLY 93 91 91 GLY GLY B . n B 1 94 PHE 94 92 92 PHE PHE B . n B 1 95 ALA 95 93 93 ALA ALA B . n B 1 96 SER 96 94 94 SER SER B . n B 1 97 PRO 97 95 95 PRO PRO B . n B 1 98 LYS 98 96 96 LYS LYS B . n B 1 99 GLU 99 97 97 GLU GLU B . n B 1 100 LYS 100 98 98 LYS LYS B . n B 1 101 ASN 101 99 99 ASN ASN B . n B 1 102 ILE 102 100 100 ILE ILE B . n B 1 103 THR 103 101 101 THR THR B . n B 1 104 THR 104 102 102 THR THR B . n B 1 105 ALA 105 103 103 ALA ALA B . n B 1 106 LYS 106 104 104 LYS LYS B . n B 1 107 ASP 107 105 105 ASP ASP B . n B 1 108 PHE 108 106 106 PHE PHE B . n B 1 109 GLU 109 107 107 GLU GLU B . n B 1 110 GLY 110 108 108 GLY GLY B . n B 1 111 LYS 111 109 109 LYS LYS B . n B 1 112 THR 112 110 110 THR THR B . n B 1 113 TYR 113 111 111 TYR TYR B . n B 1 114 GLY 114 112 112 GLY GLY B . n B 1 115 GLY 115 113 113 GLY GLY B . n B 1 116 TRP 116 114 114 TRP TRP B . n B 1 117 GLY 117 115 115 GLY GLY B . n B 1 118 SER 118 116 116 SER SER B . n B 1 119 PRO 119 117 117 PRO PRO B . n B 1 120 SER 120 118 118 SER SER B . n B 1 121 GLU 121 119 119 GLU GLU B . n B 1 122 GLU 122 120 120 GLU GLU B . n B 1 123 ALA 123 121 121 ALA ALA B . n B 1 124 VAL 124 122 122 VAL VAL B . n B 1 125 PHE 125 123 123 PHE PHE B . n B 1 126 LYS 126 124 124 LYS LYS B . n B 1 127 ALA 127 125 125 ALA ALA B . n B 1 128 VAL 128 126 126 VAL VAL B . n B 1 129 MSE 129 127 127 MSE MSE B . n B 1 130 LYS 130 128 128 LYS LYS B . n B 1 131 LYS 131 129 129 LYS LYS B . n B 1 132 ASN 132 130 130 ASN ASN B . n B 1 133 ARG 133 131 131 ARG ARG B . n B 1 134 ALA 134 132 132 ALA ALA B . n B 1 135 ASP 135 133 133 ASP ASP B . n B 1 136 PHE 136 134 134 PHE PHE B . n B 1 137 ASN 137 135 135 ASN ASN B . n B 1 138 LYS 138 136 136 LYS LYS B . n B 1 139 LEU 139 137 137 LEU LEU B . n B 1 140 LYS 140 138 138 LYS LYS B . n B 1 141 ILE 141 139 139 ILE ILE B . n B 1 142 VAL 142 140 140 VAL VAL B . n B 1 143 ASN 143 141 141 ASN ASN B . n B 1 144 THR 144 142 142 THR THR B . n B 1 145 GLY 145 143 143 GLY GLY B . n B 1 146 GLN 146 144 144 GLN GLN B . n B 1 147 ASP 147 145 145 ASP ASP B . n B 1 148 ASP 148 146 146 ASP ASP B . n B 1 149 PHE 149 147 147 PHE PHE B . n B 1 150 PHE 150 148 148 PHE PHE B . n B 1 151 ALA 151 149 149 ALA ALA B . n B 1 152 ALA 152 150 150 ALA ALA B . n B 1 153 MSE 153 151 151 MSE MSE B . n B 1 154 LYS 154 152 152 LYS LYS B . n B 1 155 THR 155 153 153 THR THR B . n B 1 156 VAL 156 154 154 VAL VAL B . n B 1 157 ASP 157 155 155 ASP ASP B . n B 1 158 PHE 158 156 156 PHE PHE B . n B 1 159 ALA 159 157 157 ALA ALA B . n B 1 160 TRP 160 158 158 TRP TRP B . n B 1 161 ILE 161 159 159 ILE ILE B . n B 1 162 PHE 162 160 160 PHE PHE B . n B 1 163 GLU 163 161 161 GLU GLU B . n B 1 164 GLY 164 162 162 GLY GLY B . n B 1 165 TRP 165 163 163 TRP TRP B . n B 1 166 ASP 166 164 164 ASP ASP B . n B 1 167 ALA 167 165 165 ALA ALA B . n B 1 168 VAL 168 166 166 VAL VAL B . n B 1 169 LYS 169 167 167 LYS LYS B . n B 1 170 ALA 170 168 168 ALA ALA B . n B 1 171 ASP 171 169 169 ASP ASP B . n B 1 172 LEU 172 170 170 LEU LEU B . n B 1 173 ILE 173 171 171 ILE ILE B . n B 1 174 GLY 174 172 172 GLY GLY B . n B 1 175 TYR 175 173 173 TYR TYR B . n B 1 176 ASP 176 174 174 ASP ASP B . n B 1 177 LEU 177 175 175 LEU LEU B . n B 1 178 ASN 178 176 176 ASN ASN B . n B 1 179 PHE 179 177 177 PHE PHE B . n B 1 180 ILE 180 178 178 ILE ILE B . n B 1 181 PRO 181 179 179 PRO PRO B . n B 1 182 VAL 182 180 180 VAL VAL B . n B 1 183 LYS 183 181 181 LYS LYS B . n B 1 184 ASP 184 182 182 ASP ASP B . n B 1 185 LEU 185 183 183 LEU LEU B . n B 1 186 ASP 186 184 184 ASP ASP B . n B 1 187 GLU 187 185 185 GLU GLU B . n B 1 188 ARG 188 186 186 ARG ARG B . n B 1 189 LEU 189 187 187 LEU LEU B . n B 1 190 ASP 190 188 188 ASP ASP B . n B 1 191 TYR 191 189 189 TYR TYR B . n B 1 192 TYR 192 190 190 TYR TYR B . n B 1 193 THR 193 191 191 THR THR B . n B 1 194 PRO 194 192 192 PRO PRO B . n B 1 195 LEU 195 193 193 LEU LEU B . n B 1 196 ILE 196 194 194 ILE ILE B . n B 1 197 ILE 197 195 195 ILE ILE B . n B 1 198 SER 198 196 196 SER SER B . n B 1 199 ASN 199 197 197 ASN ASN B . n B 1 200 GLU 200 198 198 GLU GLU B . n B 1 201 THR 201 199 199 THR THR B . n B 1 202 VAL 202 200 200 VAL VAL B . n B 1 203 LEU 203 201 201 LEU LEU B . n B 1 204 LYS 204 202 202 LYS LYS B . n B 1 205 ASP 205 203 203 ASP ASP B . n B 1 206 ASN 206 204 204 ASN ASN B . n B 1 207 PRO 207 205 205 PRO PRO B . n B 1 208 GLU 208 206 206 GLU GLU B . n B 1 209 LEU 209 207 207 LEU LEU B . n B 1 210 ALA 210 208 208 ALA ALA B . n B 1 211 LYS 211 209 209 LYS LYS B . n B 1 212 LYS 212 210 210 LYS LYS B . n B 1 213 PHE 213 211 211 PHE PHE B . n B 1 214 LEU 214 212 212 LEU LEU B . n B 1 215 LYS 215 213 213 LYS LYS B . n B 1 216 ALA 216 214 214 ALA ALA B . n B 1 217 THR 217 215 215 THR THR B . n B 1 218 THR 218 216 216 THR THR B . n B 1 219 LYS 219 217 217 LYS LYS B . n B 1 220 GLY 220 218 218 GLY GLY B . n B 1 221 TYR 221 219 219 TYR TYR B . n B 1 222 GLU 222 220 220 GLU GLU B . n B 1 223 TYR 223 221 221 TYR TYR B . n B 1 224 ALA 224 222 222 ALA ALA B . n B 1 225 ILE 225 223 223 ILE ILE B . n B 1 226 LYS 226 224 224 LYS LYS B . n B 1 227 ASN 227 225 225 ASN ASN B . n B 1 228 PRO 228 226 226 PRO PRO B . n B 1 229 GLU 229 227 227 GLU GLU B . n B 1 230 GLU 230 228 228 GLU GLU B . n B 1 231 SER 231 229 229 SER SER B . n B 1 232 ALA 232 230 230 ALA ALA B . n B 1 233 LYS 233 231 231 LYS LYS B . n B 1 234 ILE 234 232 232 ILE ILE B . n B 1 235 LEU 235 233 233 LEU LEU B . n B 1 236 VAL 236 234 234 VAL VAL B . n B 1 237 LYS 237 235 235 LYS LYS B . n B 1 238 HIS 238 236 236 HIS HIS B . n B 1 239 ALA 239 237 237 ALA ALA B . n B 1 240 PRO 240 238 238 PRO PRO B . n B 1 241 GLU 241 239 239 GLU GLU B . n B 1 242 VAL 242 240 240 VAL VAL B . n B 1 243 ASP 243 241 241 ASP ASP B . n B 1 244 GLU 244 242 242 GLU GLU B . n B 1 245 LYS 245 243 243 LYS LYS B . n B 1 246 LEU 246 244 244 LEU LEU B . n B 1 247 ALA 247 245 245 ALA ALA B . n B 1 248 LEU 248 246 246 LEU LEU B . n B 1 249 LYS 249 247 247 LYS LYS B . n B 1 250 SER 250 248 248 SER SER B . n B 1 251 GLN 251 249 249 GLN GLN B . n B 1 252 GLU 252 250 250 GLU GLU B . n B 1 253 TYR 253 251 251 TYR TYR B . n B 1 254 LEU 254 252 252 LEU LEU B . n B 1 255 ALA 255 253 253 ALA ALA B . n B 1 256 SER 256 254 254 SER SER B . n B 1 257 LYS 257 255 255 LYS LYS B . n B 1 258 TYR 258 256 256 TYR TYR B . n B 1 259 LYS 259 257 257 LYS LYS B . n B 1 260 ASP 260 258 258 ASP ASP B . n B 1 261 ASP 261 259 259 ASP ASP B . n B 1 262 ALA 262 260 260 ALA ALA B . n B 1 263 PRO 263 261 261 PRO PRO B . n B 1 264 ARG 264 262 262 ARG ARG B . n B 1 265 TRP 265 263 263 TRP TRP B . n B 1 266 GLY 266 264 264 GLY GLY B . n B 1 267 GLU 267 265 265 GLU GLU B . n B 1 268 MSE 268 266 266 MSE MSE B . n B 1 269 LYS 269 267 267 LYS LYS B . n B 1 270 ASP 270 268 268 ASP ASP B . n B 1 271 SER 271 269 269 SER SER B . n B 1 272 VAL 272 270 270 VAL VAL B . n B 1 273 TRP 273 271 271 TRP TRP B . n B 1 274 ASN 274 272 272 ASN ASN B . n B 1 275 ASN 275 273 273 ASN ASN B . n B 1 276 TYR 276 274 274 TYR TYR B . n B 1 277 THR 277 275 275 THR THR B . n B 1 278 SER 278 276 276 SER SER B . n B 1 279 PHE 279 277 277 PHE PHE B . n B 1 280 LEU 280 278 278 LEU LEU B . n B 1 281 LYS 281 279 279 LYS LYS B . n B 1 282 GLU 282 280 280 GLU GLU B . n B 1 283 TYR 283 281 281 TYR TYR B . n B 1 284 LYS 284 282 282 LYS LYS B . n B 1 285 LEU 285 283 283 LEU LEU B . n B 1 286 ILE 286 284 284 ILE ILE B . n B 1 287 ASP 287 285 285 ASP ASP B . n B 1 288 LYS 288 286 286 LYS LYS B . n B 1 289 ASP 289 287 287 ASP ASP B . n B 1 290 MSE 290 288 288 MSE MSE B . n B 1 291 LYS 291 289 289 LYS LYS B . n B 1 292 ALA 292 290 290 ALA ALA B . n B 1 293 SER 293 291 291 SER SER B . n B 1 294 ASP 294 292 292 ASP ASP B . n B 1 295 ALA 295 293 293 ALA ALA B . n B 1 296 TYR 296 294 294 TYR TYR B . n B 1 297 THR 297 295 295 THR THR B . n B 1 298 ASN 298 296 296 ASN ASN B . n B 1 299 GLU 299 297 297 GLU GLU B . n B 1 300 PHE 300 298 298 PHE PHE B . n B 1 301 LEU 301 299 299 LEU LEU B . n B 1 302 PRO 302 300 300 PRO PRO B . n B 1 303 GLN 303 301 301 GLN GLN B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 10 A MSE 8 ? MET SELENOMETHIONINE 2 A MSE 129 A MSE 127 ? MET SELENOMETHIONINE 3 A MSE 153 A MSE 151 ? MET SELENOMETHIONINE 4 A MSE 268 A MSE 266 ? MET SELENOMETHIONINE 5 A MSE 290 A MSE 288 ? MET SELENOMETHIONINE 6 B MSE 10 B MSE 8 ? MET SELENOMETHIONINE 7 B MSE 129 B MSE 127 ? MET SELENOMETHIONINE 8 B MSE 153 B MSE 151 ? MET SELENOMETHIONINE 9 B MSE 268 B MSE 266 ? MET SELENOMETHIONINE 10 B MSE 290 B MSE 288 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-12-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 phasing . ? 3 SHELXS phasing . ? 4 MLPHARE phasing . ? 5 DM 'model building' . ? 6 PHENIX refinement '(phenix.refine: 1.8.1_1161)' ? 7 HKL-3000 'data reduction' . ? 8 HKL-3000 'data scaling' . ? 9 DM phasing . ? 10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 61 ? ? -137.82 -156.87 2 1 TRP A 163 ? ? -112.31 -81.55 3 1 ASP A 258 ? ? 54.94 -123.29 4 1 SER B 61 ? ? -140.74 -159.35 5 1 TRP B 163 ? ? -115.00 -77.91 6 1 ASP B 258 ? ? 53.98 -123.69 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -1 ? A SER 1 2 1 Y 1 A ASN 0 ? A ASN 2 3 1 Y 1 A ALA 1 ? A ALA 3 4 1 Y 1 A SER 2 ? A SER 4 5 1 Y 1 B SER -1 ? B SER 1 6 1 Y 1 B ASN 0 ? B ASN 2 7 1 Y 1 B ALA 1 ? B ALA 3 8 1 Y 1 B SER 2 ? B SER 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM' VIB 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VIB 1 401 311 VIB TMN A . D 2 VIB 1 401 311 VIB TMN B . E 3 HOH 1 501 1 HOH HOH A . E 3 HOH 2 502 2 HOH HOH A . E 3 HOH 3 503 3 HOH HOH A . E 3 HOH 4 504 4 HOH HOH A . E 3 HOH 5 505 5 HOH HOH A . E 3 HOH 6 506 11 HOH HOH A . E 3 HOH 7 507 13 HOH HOH A . E 3 HOH 8 508 14 HOH HOH A . E 3 HOH 9 509 17 HOH HOH A . E 3 HOH 10 510 18 HOH HOH A . E 3 HOH 11 511 20 HOH HOH A . E 3 HOH 12 512 22 HOH HOH A . E 3 HOH 13 513 23 HOH HOH A . E 3 HOH 14 514 24 HOH HOH A . E 3 HOH 15 515 27 HOH HOH A . E 3 HOH 16 516 29 HOH HOH A . E 3 HOH 17 517 30 HOH HOH A . E 3 HOH 18 518 32 HOH HOH A . E 3 HOH 19 519 33 HOH HOH A . E 3 HOH 20 520 34 HOH HOH A . E 3 HOH 21 521 35 HOH HOH A . E 3 HOH 22 522 37 HOH HOH A . E 3 HOH 23 523 40 HOH HOH A . E 3 HOH 24 524 44 HOH HOH A . E 3 HOH 25 525 45 HOH HOH A . E 3 HOH 26 526 46 HOH HOH A . E 3 HOH 27 527 47 HOH HOH A . E 3 HOH 28 528 48 HOH HOH A . E 3 HOH 29 529 49 HOH HOH A . E 3 HOH 30 530 51 HOH HOH A . E 3 HOH 31 531 52 HOH HOH A . E 3 HOH 32 532 53 HOH HOH A . E 3 HOH 33 533 54 HOH HOH A . E 3 HOH 34 534 56 HOH HOH A . E 3 HOH 35 535 58 HOH HOH A . E 3 HOH 36 536 59 HOH HOH A . E 3 HOH 37 537 60 HOH HOH A . E 3 HOH 38 538 64 HOH HOH A . E 3 HOH 39 539 67 HOH HOH A . E 3 HOH 40 540 68 HOH HOH A . E 3 HOH 41 541 70 HOH HOH A . E 3 HOH 42 542 73 HOH HOH A . E 3 HOH 43 543 74 HOH HOH A . E 3 HOH 44 544 75 HOH HOH A . E 3 HOH 45 545 78 HOH HOH A . E 3 HOH 46 546 85 HOH HOH A . E 3 HOH 47 547 86 HOH HOH A . E 3 HOH 48 548 91 HOH HOH A . E 3 HOH 49 549 92 HOH HOH A . E 3 HOH 50 550 94 HOH HOH A . E 3 HOH 51 551 98 HOH HOH A . E 3 HOH 52 552 102 HOH HOH A . E 3 HOH 53 553 103 HOH HOH A . E 3 HOH 54 554 104 HOH HOH A . E 3 HOH 55 555 105 HOH HOH A . E 3 HOH 56 556 107 HOH HOH A . E 3 HOH 57 557 108 HOH HOH A . E 3 HOH 58 558 109 HOH HOH A . E 3 HOH 59 559 110 HOH HOH A . E 3 HOH 60 560 111 HOH HOH A . E 3 HOH 61 561 114 HOH HOH A . E 3 HOH 62 562 116 HOH HOH A . E 3 HOH 63 563 119 HOH HOH A . E 3 HOH 64 564 121 HOH HOH A . E 3 HOH 65 565 124 HOH HOH A . E 3 HOH 66 566 127 HOH HOH A . E 3 HOH 67 567 128 HOH HOH A . E 3 HOH 68 568 129 HOH HOH A . E 3 HOH 69 569 131 HOH HOH A . E 3 HOH 70 570 132 HOH HOH A . E 3 HOH 71 571 133 HOH HOH A . E 3 HOH 72 572 134 HOH HOH A . E 3 HOH 73 573 137 HOH HOH A . E 3 HOH 74 574 138 HOH HOH A . E 3 HOH 75 575 139 HOH HOH A . E 3 HOH 76 576 141 HOH HOH A . E 3 HOH 77 577 142 HOH HOH A . E 3 HOH 78 578 147 HOH HOH A . E 3 HOH 79 579 149 HOH HOH A . E 3 HOH 80 580 150 HOH HOH A . E 3 HOH 81 581 152 HOH HOH A . E 3 HOH 82 582 153 HOH HOH A . E 3 HOH 83 583 155 HOH HOH A . E 3 HOH 84 584 156 HOH HOH A . E 3 HOH 85 585 160 HOH HOH A . E 3 HOH 86 586 161 HOH HOH A . E 3 HOH 87 587 167 HOH HOH A . E 3 HOH 88 588 170 HOH HOH A . E 3 HOH 89 589 171 HOH HOH A . E 3 HOH 90 590 172 HOH HOH A . E 3 HOH 91 591 175 HOH HOH A . E 3 HOH 92 592 176 HOH HOH A . E 3 HOH 93 593 177 HOH HOH A . E 3 HOH 94 594 178 HOH HOH A . E 3 HOH 95 595 179 HOH HOH A . E 3 HOH 96 596 180 HOH HOH A . E 3 HOH 97 597 181 HOH HOH A . E 3 HOH 98 598 183 HOH HOH A . E 3 HOH 99 599 184 HOH HOH A . E 3 HOH 100 600 187 HOH HOH A . E 3 HOH 101 601 190 HOH HOH A . E 3 HOH 102 602 191 HOH HOH A . E 3 HOH 103 603 192 HOH HOH A . E 3 HOH 104 604 197 HOH HOH A . E 3 HOH 105 605 198 HOH HOH A . E 3 HOH 106 606 199 HOH HOH A . E 3 HOH 107 607 201 HOH HOH A . E 3 HOH 108 608 202 HOH HOH A . E 3 HOH 109 609 203 HOH HOH A . E 3 HOH 110 610 204 HOH HOH A . E 3 HOH 111 611 205 HOH HOH A . E 3 HOH 112 612 207 HOH HOH A . E 3 HOH 113 613 209 HOH HOH A . E 3 HOH 114 614 210 HOH HOH A . E 3 HOH 115 615 211 HOH HOH A . E 3 HOH 116 616 212 HOH HOH A . E 3 HOH 117 617 214 HOH HOH A . E 3 HOH 118 618 216 HOH HOH A . E 3 HOH 119 619 217 HOH HOH A . E 3 HOH 120 620 220 HOH HOH A . E 3 HOH 121 621 223 HOH HOH A . E 3 HOH 122 622 229 HOH HOH A . E 3 HOH 123 623 230 HOH HOH A . E 3 HOH 124 624 232 HOH HOH A . E 3 HOH 125 625 233 HOH HOH A . E 3 HOH 126 626 234 HOH HOH A . E 3 HOH 127 627 238 HOH HOH A . E 3 HOH 128 628 240 HOH HOH A . E 3 HOH 129 629 241 HOH HOH A . E 3 HOH 130 630 243 HOH HOH A . E 3 HOH 131 631 245 HOH HOH A . E 3 HOH 132 632 246 HOH HOH A . E 3 HOH 133 633 247 HOH HOH A . E 3 HOH 134 634 249 HOH HOH A . E 3 HOH 135 635 250 HOH HOH A . E 3 HOH 136 636 253 HOH HOH A . E 3 HOH 137 637 256 HOH HOH A . E 3 HOH 138 638 257 HOH HOH A . E 3 HOH 139 639 258 HOH HOH A . E 3 HOH 140 640 259 HOH HOH A . E 3 HOH 141 641 263 HOH HOH A . E 3 HOH 142 642 264 HOH HOH A . E 3 HOH 143 643 271 HOH HOH A . E 3 HOH 144 644 272 HOH HOH A . E 3 HOH 145 645 274 HOH HOH A . E 3 HOH 146 646 276 HOH HOH A . E 3 HOH 147 647 277 HOH HOH A . E 3 HOH 148 648 281 HOH HOH A . E 3 HOH 149 649 284 HOH HOH A . E 3 HOH 150 650 285 HOH HOH A . E 3 HOH 151 651 290 HOH HOH A . E 3 HOH 152 652 291 HOH HOH A . E 3 HOH 153 653 294 HOH HOH A . E 3 HOH 154 654 297 HOH HOH A . E 3 HOH 155 655 299 HOH HOH A . E 3 HOH 156 656 300 HOH HOH A . E 3 HOH 157 657 303 HOH HOH A . E 3 HOH 158 658 304 HOH HOH A . E 3 HOH 159 659 307 HOH HOH A . E 3 HOH 160 660 309 HOH HOH A . E 3 HOH 161 661 313 HOH HOH A . E 3 HOH 162 662 314 HOH HOH A . E 3 HOH 163 663 315 HOH HOH A . E 3 HOH 164 664 317 HOH HOH A . E 3 HOH 165 665 319 HOH HOH A . E 3 HOH 166 666 321 HOH HOH A . E 3 HOH 167 667 324 HOH HOH A . E 3 HOH 168 668 325 HOH HOH A . E 3 HOH 169 669 326 HOH HOH A . E 3 HOH 170 670 337 HOH HOH A . E 3 HOH 171 671 338 HOH HOH A . E 3 HOH 172 672 339 HOH HOH A . E 3 HOH 173 673 340 HOH HOH A . E 3 HOH 174 674 341 HOH HOH A . E 3 HOH 175 675 342 HOH HOH A . E 3 HOH 176 676 343 HOH HOH A . E 3 HOH 177 677 344 HOH HOH A . E 3 HOH 178 678 345 HOH HOH A . E 3 HOH 179 679 346 HOH HOH A . E 3 HOH 180 680 347 HOH HOH A . E 3 HOH 181 681 369 HOH HOH A . E 3 HOH 182 682 371 HOH HOH A . E 3 HOH 183 683 372 HOH HOH A . E 3 HOH 184 684 373 HOH HOH A . E 3 HOH 185 685 374 HOH HOH A . E 3 HOH 186 686 375 HOH HOH A . E 3 HOH 187 687 377 HOH HOH A . E 3 HOH 188 688 378 HOH HOH A . E 3 HOH 189 689 379 HOH HOH A . E 3 HOH 190 690 380 HOH HOH A . E 3 HOH 191 691 381 HOH HOH A . E 3 HOH 192 692 382 HOH HOH A . E 3 HOH 193 693 383 HOH HOH A . E 3 HOH 194 694 387 HOH HOH A . E 3 HOH 195 695 388 HOH HOH A . E 3 HOH 196 696 390 HOH HOH A . E 3 HOH 197 697 391 HOH HOH A . E 3 HOH 198 698 394 HOH HOH A . E 3 HOH 199 699 395 HOH HOH A . E 3 HOH 200 700 396 HOH HOH A . E 3 HOH 201 701 397 HOH HOH A . E 3 HOH 202 702 399 HOH HOH A . E 3 HOH 203 703 400 HOH HOH A . E 3 HOH 204 704 401 HOH HOH A . E 3 HOH 205 705 404 HOH HOH A . E 3 HOH 206 706 405 HOH HOH A . E 3 HOH 207 707 407 HOH HOH A . E 3 HOH 208 708 408 HOH HOH A . E 3 HOH 209 709 409 HOH HOH A . E 3 HOH 210 710 412 HOH HOH A . E 3 HOH 211 711 413 HOH HOH A . E 3 HOH 212 712 414 HOH HOH A . E 3 HOH 213 713 417 HOH HOH A . F 3 HOH 1 501 6 HOH HOH B . F 3 HOH 2 502 7 HOH HOH B . F 3 HOH 3 503 8 HOH HOH B . F 3 HOH 4 504 9 HOH HOH B . F 3 HOH 5 505 10 HOH HOH B . F 3 HOH 6 506 12 HOH HOH B . F 3 HOH 7 507 15 HOH HOH B . F 3 HOH 8 508 16 HOH HOH B . F 3 HOH 9 509 19 HOH HOH B . F 3 HOH 10 510 21 HOH HOH B . F 3 HOH 11 511 25 HOH HOH B . F 3 HOH 12 512 26 HOH HOH B . F 3 HOH 13 513 28 HOH HOH B . F 3 HOH 14 514 31 HOH HOH B . F 3 HOH 15 515 36 HOH HOH B . F 3 HOH 16 516 38 HOH HOH B . F 3 HOH 17 517 39 HOH HOH B . F 3 HOH 18 518 41 HOH HOH B . F 3 HOH 19 519 42 HOH HOH B . F 3 HOH 20 520 43 HOH HOH B . F 3 HOH 21 521 50 HOH HOH B . F 3 HOH 22 522 55 HOH HOH B . F 3 HOH 23 523 57 HOH HOH B . F 3 HOH 24 524 61 HOH HOH B . F 3 HOH 25 525 62 HOH HOH B . F 3 HOH 26 526 63 HOH HOH B . F 3 HOH 27 527 65 HOH HOH B . F 3 HOH 28 528 66 HOH HOH B . F 3 HOH 29 529 69 HOH HOH B . F 3 HOH 30 530 71 HOH HOH B . F 3 HOH 31 531 72 HOH HOH B . F 3 HOH 32 532 76 HOH HOH B . F 3 HOH 33 533 77 HOH HOH B . F 3 HOH 34 534 79 HOH HOH B . F 3 HOH 35 535 80 HOH HOH B . F 3 HOH 36 536 81 HOH HOH B . F 3 HOH 37 537 82 HOH HOH B . F 3 HOH 38 538 83 HOH HOH B . F 3 HOH 39 539 84 HOH HOH B . F 3 HOH 40 540 87 HOH HOH B . F 3 HOH 41 541 88 HOH HOH B . F 3 HOH 42 542 89 HOH HOH B . F 3 HOH 43 543 90 HOH HOH B . F 3 HOH 44 544 93 HOH HOH B . F 3 HOH 45 545 95 HOH HOH B . F 3 HOH 46 546 96 HOH HOH B . F 3 HOH 47 547 97 HOH HOH B . F 3 HOH 48 548 99 HOH HOH B . F 3 HOH 49 549 100 HOH HOH B . F 3 HOH 50 550 101 HOH HOH B . F 3 HOH 51 551 106 HOH HOH B . F 3 HOH 52 552 112 HOH HOH B . F 3 HOH 53 553 113 HOH HOH B . F 3 HOH 54 554 115 HOH HOH B . F 3 HOH 55 555 117 HOH HOH B . F 3 HOH 56 556 118 HOH HOH B . F 3 HOH 57 557 120 HOH HOH B . F 3 HOH 58 558 122 HOH HOH B . F 3 HOH 59 559 123 HOH HOH B . F 3 HOH 60 560 125 HOH HOH B . F 3 HOH 61 561 126 HOH HOH B . F 3 HOH 62 562 130 HOH HOH B . F 3 HOH 63 563 135 HOH HOH B . F 3 HOH 64 564 136 HOH HOH B . F 3 HOH 65 565 140 HOH HOH B . F 3 HOH 66 566 143 HOH HOH B . F 3 HOH 67 567 144 HOH HOH B . F 3 HOH 68 568 145 HOH HOH B . F 3 HOH 69 569 146 HOH HOH B . F 3 HOH 70 570 148 HOH HOH B . F 3 HOH 71 571 151 HOH HOH B . F 3 HOH 72 572 154 HOH HOH B . F 3 HOH 73 573 157 HOH HOH B . F 3 HOH 74 574 158 HOH HOH B . F 3 HOH 75 575 159 HOH HOH B . F 3 HOH 76 576 162 HOH HOH B . F 3 HOH 77 577 163 HOH HOH B . F 3 HOH 78 578 164 HOH HOH B . F 3 HOH 79 579 165 HOH HOH B . F 3 HOH 80 580 166 HOH HOH B . F 3 HOH 81 581 168 HOH HOH B . F 3 HOH 82 582 169 HOH HOH B . F 3 HOH 83 583 173 HOH HOH B . F 3 HOH 84 584 174 HOH HOH B . F 3 HOH 85 585 182 HOH HOH B . F 3 HOH 86 586 185 HOH HOH B . F 3 HOH 87 587 186 HOH HOH B . F 3 HOH 88 588 188 HOH HOH B . F 3 HOH 89 589 189 HOH HOH B . F 3 HOH 90 590 193 HOH HOH B . F 3 HOH 91 591 194 HOH HOH B . F 3 HOH 92 592 195 HOH HOH B . F 3 HOH 93 593 196 HOH HOH B . F 3 HOH 94 594 200 HOH HOH B . F 3 HOH 95 595 206 HOH HOH B . F 3 HOH 96 596 208 HOH HOH B . F 3 HOH 97 597 213 HOH HOH B . F 3 HOH 98 598 215 HOH HOH B . F 3 HOH 99 599 218 HOH HOH B . F 3 HOH 100 600 219 HOH HOH B . F 3 HOH 101 601 221 HOH HOH B . F 3 HOH 102 602 222 HOH HOH B . F 3 HOH 103 603 224 HOH HOH B . F 3 HOH 104 604 225 HOH HOH B . F 3 HOH 105 605 226 HOH HOH B . F 3 HOH 106 606 227 HOH HOH B . F 3 HOH 107 607 228 HOH HOH B . F 3 HOH 108 608 231 HOH HOH B . F 3 HOH 109 609 235 HOH HOH B . F 3 HOH 110 610 236 HOH HOH B . F 3 HOH 111 611 237 HOH HOH B . F 3 HOH 112 612 239 HOH HOH B . F 3 HOH 113 613 242 HOH HOH B . F 3 HOH 114 614 244 HOH HOH B . F 3 HOH 115 615 248 HOH HOH B . F 3 HOH 116 616 251 HOH HOH B . F 3 HOH 117 617 252 HOH HOH B . F 3 HOH 118 618 254 HOH HOH B . F 3 HOH 119 619 255 HOH HOH B . F 3 HOH 120 620 260 HOH HOH B . F 3 HOH 121 621 261 HOH HOH B . F 3 HOH 122 622 262 HOH HOH B . F 3 HOH 123 623 265 HOH HOH B . F 3 HOH 124 624 266 HOH HOH B . F 3 HOH 125 625 267 HOH HOH B . F 3 HOH 126 626 268 HOH HOH B . F 3 HOH 127 627 269 HOH HOH B . F 3 HOH 128 628 270 HOH HOH B . F 3 HOH 129 629 273 HOH HOH B . F 3 HOH 130 630 275 HOH HOH B . F 3 HOH 131 631 278 HOH HOH B . F 3 HOH 132 632 279 HOH HOH B . F 3 HOH 133 633 280 HOH HOH B . F 3 HOH 134 634 282 HOH HOH B . F 3 HOH 135 635 283 HOH HOH B . F 3 HOH 136 636 286 HOH HOH B . F 3 HOH 137 637 287 HOH HOH B . F 3 HOH 138 638 288 HOH HOH B . F 3 HOH 139 639 289 HOH HOH B . F 3 HOH 140 640 292 HOH HOH B . F 3 HOH 141 641 293 HOH HOH B . F 3 HOH 142 642 295 HOH HOH B . F 3 HOH 143 643 296 HOH HOH B . F 3 HOH 144 644 298 HOH HOH B . F 3 HOH 145 645 301 HOH HOH B . F 3 HOH 146 646 302 HOH HOH B . F 3 HOH 147 647 305 HOH HOH B . F 3 HOH 148 648 306 HOH HOH B . F 3 HOH 149 649 308 HOH HOH B . F 3 HOH 150 650 310 HOH HOH B . F 3 HOH 151 651 311 HOH HOH B . F 3 HOH 152 652 312 HOH HOH B . F 3 HOH 153 653 316 HOH HOH B . F 3 HOH 154 654 318 HOH HOH B . F 3 HOH 155 655 320 HOH HOH B . F 3 HOH 156 656 322 HOH HOH B . F 3 HOH 157 657 323 HOH HOH B . F 3 HOH 158 658 327 HOH HOH B . F 3 HOH 159 659 328 HOH HOH B . F 3 HOH 160 660 329 HOH HOH B . F 3 HOH 161 661 330 HOH HOH B . F 3 HOH 162 662 331 HOH HOH B . F 3 HOH 163 663 332 HOH HOH B . F 3 HOH 164 664 333 HOH HOH B . F 3 HOH 165 665 334 HOH HOH B . F 3 HOH 166 666 335 HOH HOH B . F 3 HOH 167 667 336 HOH HOH B . F 3 HOH 168 668 348 HOH HOH B . F 3 HOH 169 669 349 HOH HOH B . F 3 HOH 170 670 350 HOH HOH B . F 3 HOH 171 671 351 HOH HOH B . F 3 HOH 172 672 352 HOH HOH B . F 3 HOH 173 673 353 HOH HOH B . F 3 HOH 174 674 354 HOH HOH B . F 3 HOH 175 675 355 HOH HOH B . F 3 HOH 176 676 356 HOH HOH B . F 3 HOH 177 677 357 HOH HOH B . F 3 HOH 178 678 358 HOH HOH B . F 3 HOH 179 679 359 HOH HOH B . F 3 HOH 180 680 360 HOH HOH B . F 3 HOH 181 681 361 HOH HOH B . F 3 HOH 182 682 362 HOH HOH B . F 3 HOH 183 683 363 HOH HOH B . F 3 HOH 184 684 364 HOH HOH B . F 3 HOH 185 685 365 HOH HOH B . F 3 HOH 186 686 366 HOH HOH B . F 3 HOH 187 687 367 HOH HOH B . F 3 HOH 188 688 368 HOH HOH B . F 3 HOH 189 689 370 HOH HOH B . F 3 HOH 190 690 376 HOH HOH B . F 3 HOH 191 691 384 HOH HOH B . F 3 HOH 192 692 385 HOH HOH B . F 3 HOH 193 693 386 HOH HOH B . F 3 HOH 194 694 389 HOH HOH B . F 3 HOH 195 695 392 HOH HOH B . F 3 HOH 196 696 393 HOH HOH B . F 3 HOH 197 697 398 HOH HOH B . F 3 HOH 198 698 402 HOH HOH B . F 3 HOH 199 699 403 HOH HOH B . F 3 HOH 200 700 406 HOH HOH B . F 3 HOH 201 701 410 HOH HOH B . F 3 HOH 202 702 411 HOH HOH B . F 3 HOH 203 703 415 HOH HOH B . F 3 HOH 204 704 416 HOH HOH B . F 3 HOH 205 705 418 HOH HOH B . F 3 HOH 206 706 419 HOH HOH B . #