HEADER IMMUNE SYSTEM 19-NOV-13 4NOF TITLE CRYSTAL STRUCTURE OF THE SECOND IG DOMAIN FROM MOUSE POLYMERIC TITLE 2 IMMUNOGLOBULIN RECEPTOR [PSI-NYSGRC-006220] COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERIC IMMUNOGLOBULIN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: IG-LIKE V-TYPE 2 DOMAIN RESIDUES 133-249; COMPND 5 SYNONYM: PIGR, POLY-IG RECEPTOR, SECRETORY COMPONENT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PIGR; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PIEX KEYWDS IMMUNE SYSTEM, ORTHOLOG, STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK KEYWDS 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM, NYSGRC, IG DOMAIN, KEYWDS 3 POLYMERIC IMMUNOGLOBULIN RECEPTOR, IMMUNE FUNCTION NETWORK, IFN, KEYWDS 4 ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION NETWORK EXPDTA X-RAY DIFFRACTION AUTHOR P.SAMPATHKUMAR,P.R.KUMAR,M.AHMED,R.BANU,R.BHOSLE,D.A.CALARESE, AUTHOR 2 A.CELIKGIL,S.CHAMALA,M.K.CHAN,S.CHOWDHURY,A.FISER,S.J.GARFORTH, AUTHOR 3 A.S.GLENN,B.HILLERICH,K.KHAFIZOV,J.ATTONITO,J.D.LOVE,H.PATEL, AUTHOR 4 R.PATEL,R.D.SEIDEL,B.SMITH,M.STEAD,A.CASADEVALL,S.C.ALMO,NEW YORK AUTHOR 5 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC),ATOMS-TO-ANIMALS: AUTHOR 6 THE IMMUNE FUNCTION NETWORK (IFN) REVDAT 4 06-NOV-24 4NOF 1 REMARK REVDAT 3 20-SEP-23 4NOF 1 HETSYN REVDAT 2 29-JUL-20 4NOF 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 04-DEC-13 4NOF 0 JRNL AUTH P.SAMPATHKUMAR,A.CASADEVALL,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF THE SECOND IG DOMAIN FROM MOUSE JRNL TITL 2 POLYMERIC IMMUNOGLOBULIN RECEPTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 30082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1522 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2074 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1675 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.84000 REMARK 3 B22 (A**2) : 1.15000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.77000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.091 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1790 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1733 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2436 ; 1.531 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4016 ; 0.768 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 233 ; 6.358 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;41.297 ;25.616 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 324 ;11.739 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;21.406 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2005 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 365 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 884 ; 2.163 ; 2.381 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 883 ; 2.150 ; 2.377 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1106 ; 3.486 ; 3.557 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4NOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0750 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30181 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.70200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: POLY-ALANINE MODEL OF PDB CODE 1XED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 5% GLYCEROL), RESERVOIR (0.1 M CITRIC ACID:NAOH PH 3.5, 25% REMARK 280 (W/V) PEG 3350), CRYOPROTECTION (30% GLYCEROL), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.69400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.68250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.69400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.68250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 128 REMARK 465 ASP A 129 REMARK 465 TYR A 130 REMARK 465 PRO A 242 REMARK 465 GLU A 243 REMARK 465 LEU A 244 REMARK 465 LEU A 245 REMARK 465 ALA A 246 REMARK 465 GLU A 247 REMARK 465 ASN A 248 REMARK 465 LEU A 249 REMARK 465 TYR A 250 REMARK 465 PHE A 251 REMARK 465 GLN A 252 REMARK 465 GLN B 128 REMARK 465 ASP B 129 REMARK 465 TYR B 130 REMARK 465 GLY B 131 REMARK 465 GLY B 132 REMARK 465 LEU B 133 REMARK 465 PRO B 134 REMARK 465 SER B 135 REMARK 465 PRO B 242 REMARK 465 GLU B 243 REMARK 465 LEU B 244 REMARK 465 LEU B 245 REMARK 465 ALA B 246 REMARK 465 GLU B 247 REMARK 465 ASN B 248 REMARK 465 LEU B 249 REMARK 465 TYR B 250 REMARK 465 PHE B 251 REMARK 465 GLN B 252 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 196 O HOH A 448 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 178 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 170 97.89 -60.48 REMARK 500 GLU B 181 7.59 82.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NOB RELATED DB: PDB REMARK 900 RELATED ID: NYSGRC-006220 RELATED DB: TARGETTRACK DBREF 4NOF A 133 245 UNP O70570 PIGR_MOUSE 133 245 DBREF 4NOF B 133 245 UNP O70570 PIGR_MOUSE 133 245 SEQADV 4NOF GLN A 128 UNP O70570 EXPRESSION TAG SEQADV 4NOF ASP A 129 UNP O70570 EXPRESSION TAG SEQADV 4NOF TYR A 130 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLY A 131 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLY A 132 UNP O70570 EXPRESSION TAG SEQADV 4NOF ALA A 246 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLU A 247 UNP O70570 EXPRESSION TAG SEQADV 4NOF ASN A 248 UNP O70570 EXPRESSION TAG SEQADV 4NOF LEU A 249 UNP O70570 EXPRESSION TAG SEQADV 4NOF TYR A 250 UNP O70570 EXPRESSION TAG SEQADV 4NOF PHE A 251 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLN A 252 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLN B 128 UNP O70570 EXPRESSION TAG SEQADV 4NOF ASP B 129 UNP O70570 EXPRESSION TAG SEQADV 4NOF TYR B 130 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLY B 131 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLY B 132 UNP O70570 EXPRESSION TAG SEQADV 4NOF ALA B 246 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLU B 247 UNP O70570 EXPRESSION TAG SEQADV 4NOF ASN B 248 UNP O70570 EXPRESSION TAG SEQADV 4NOF LEU B 249 UNP O70570 EXPRESSION TAG SEQADV 4NOF TYR B 250 UNP O70570 EXPRESSION TAG SEQADV 4NOF PHE B 251 UNP O70570 EXPRESSION TAG SEQADV 4NOF GLN B 252 UNP O70570 EXPRESSION TAG SEQRES 1 A 125 GLN ASP TYR GLY GLY LEU PRO SER ASP THR HIS VAL TYR SEQRES 2 A 125 THR LYS ASP ILE GLY ARG ASN VAL THR ILE GLU CYS PRO SEQRES 3 A 125 PHE LYS ARG GLU ASN ALA PRO SER LYS LYS SER LEU CYS SEQRES 4 A 125 LYS LYS THR ASN GLN SER CYS GLU LEU VAL ILE ASP SER SEQRES 5 A 125 THR GLU LYS VAL ASN PRO SER TYR ILE GLY ARG ALA LYS SEQRES 6 A 125 LEU PHE MET LYS GLY THR ASP LEU THR VAL PHE TYR VAL SEQRES 7 A 125 ASN ILE SER HIS LEU THR HIS ASN ASP ALA GLY LEU TYR SEQRES 8 A 125 ILE CYS GLN ALA GLY GLU GLY PRO SER ALA ASP LYS LYS SEQRES 9 A 125 ASN VAL ASP LEU GLN VAL LEU ALA PRO GLU PRO GLU LEU SEQRES 10 A 125 LEU ALA GLU ASN LEU TYR PHE GLN SEQRES 1 B 125 GLN ASP TYR GLY GLY LEU PRO SER ASP THR HIS VAL TYR SEQRES 2 B 125 THR LYS ASP ILE GLY ARG ASN VAL THR ILE GLU CYS PRO SEQRES 3 B 125 PHE LYS ARG GLU ASN ALA PRO SER LYS LYS SER LEU CYS SEQRES 4 B 125 LYS LYS THR ASN GLN SER CYS GLU LEU VAL ILE ASP SER SEQRES 5 B 125 THR GLU LYS VAL ASN PRO SER TYR ILE GLY ARG ALA LYS SEQRES 6 B 125 LEU PHE MET LYS GLY THR ASP LEU THR VAL PHE TYR VAL SEQRES 7 B 125 ASN ILE SER HIS LEU THR HIS ASN ASP ALA GLY LEU TYR SEQRES 8 B 125 ILE CYS GLN ALA GLY GLU GLY PRO SER ALA ASP LYS LYS SEQRES 9 B 125 ASN VAL ASP LEU GLN VAL LEU ALA PRO GLU PRO GLU LEU SEQRES 10 B 125 LEU ALA GLU ASN LEU TYR PHE GLN MODRES 4NOF ASN A 147 ASN GLYCOSYLATION SITE MODRES 4NOF ASN B 147 ASN GLYCOSYLATION SITE HET NAG A 301 14 HET NAG B 301 14 HET GOL B 302 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *146(H2 O) HELIX 1 1 LYS A 155 ALA A 159 5 5 HELIX 2 2 THR A 211 ALA A 215 5 5 HELIX 3 3 GLU A 224 ALA A 228 5 5 HELIX 4 4 LYS B 155 ALA B 159 5 5 HELIX 5 5 THR B 211 ALA B 215 5 5 HELIX 6 6 GLU B 224 ALA B 228 5 5 SHEET 1 A 5 HIS A 138 ASP A 143 0 SHEET 2 A 5 ASP A 229 LEU A 238 1 O GLN A 236 N TYR A 140 SHEET 3 A 5 GLY A 216 ALA A 222 -1 N TYR A 218 O VAL A 233 SHEET 4 A 5 LYS A 163 LYS A 168 -1 N SER A 164 O GLN A 221 SHEET 5 A 5 CYS A 173 ASP A 178 -1 O VAL A 176 N LEU A 165 SHEET 1 B 3 VAL A 148 PRO A 153 0 SHEET 2 B 3 VAL A 202 ILE A 207 -1 O PHE A 203 N CYS A 152 SHEET 3 B 3 ALA A 191 PHE A 194 -1 N PHE A 194 O TYR A 204 SHEET 1 C 5 HIS B 138 ASP B 143 0 SHEET 2 C 5 ASP B 229 LEU B 238 1 O GLN B 236 N TYR B 140 SHEET 3 C 5 GLY B 216 ALA B 222 -1 N CYS B 220 O LYS B 231 SHEET 4 C 5 LYS B 163 THR B 169 -1 N SER B 164 O GLN B 221 SHEET 5 C 5 SER B 172 ASP B 178 -1 O SER B 172 N THR B 169 SHEET 1 D 3 VAL B 148 PRO B 153 0 SHEET 2 D 3 VAL B 202 ILE B 207 -1 O VAL B 205 N ILE B 150 SHEET 3 D 3 ALA B 191 PHE B 194 -1 N PHE B 194 O TYR B 204 SSBOND 1 CYS A 152 CYS A 220 1555 1555 2.07 SSBOND 2 CYS A 166 CYS A 173 1555 1555 2.04 SSBOND 3 CYS B 152 CYS B 220 1555 1555 2.08 SSBOND 4 CYS B 166 CYS B 173 1555 1555 2.03 LINK ND2 ASN A 147 C1 NAG A 301 1555 1555 1.45 LINK ND2 ASN B 147 C1 NAG B 301 1555 1555 1.46 CRYST1 101.388 35.365 73.238 90.00 105.96 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009863 0.000000 0.002821 0.00000 SCALE2 0.000000 0.028277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014201 0.00000