HEADER UNKNOWN FUNCTION 22-NOV-13 4NPO TITLE CRYSTAL STRUCTURE OF PROTEIN WITH UNKNOWN FUNCTION FROM DEINOCOCCUS TITLE 2 RADIODURANS AT P61 SPACEGROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 5 NCIMB 9279 / R1 / VKM B-1422; SOURCE 6 GENE: DR_2100; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.M.BOYKO,M.A.GORBACHEVA,T.V.RAKITINA,D.A.KORGENEVSKY,I.G.SHABALIN, AUTHOR 2 I.A.SHUMILIN,P.V.DOROVATOVSKY,A.V.LIPKIN,V.O.POPOV REVDAT 2 08-NOV-23 4NPO 1 REMARK SEQADV REVDAT 1 11-DEC-13 4NPO 0 JRNL AUTH K.M.BOYKO,M.A.GORBACHEVA,T.V.RAKITINA,D.A.KORGENEVSKY, JRNL AUTH 2 I.G.SHABALIN,I.A.SHUMILIN,P.V.DOROVATOVSKY,A.V.LIPKIN, JRNL AUTH 3 V.O.POPOV JRNL TITL CRYSTAL STRUCTURE OF PROTEIN WITH UNKNOWN FUNCTION AT P61 JRNL TITL 2 SPACEGROUP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 41305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2181 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2993 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1571 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 241 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.34000 REMARK 3 B22 (A**2) : 3.34000 REMARK 3 B33 (A**2) : -6.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.011 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.012 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.030 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.762 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1705 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1647 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2314 ; 1.901 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3780 ; 2.270 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 5.720 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;39.712 ;24.615 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 286 ;12.411 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;24.718 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 275 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1914 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 395 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 835 ; 1.519 ; 1.669 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 836 ; 1.519 ; 1.670 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1035 ; 2.186 ; 2.489 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1036 ; 2.186 ; 2.490 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 870 ; 2.852 ; 2.021 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 871 ; 2.850 ; 2.022 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1278 ; 4.216 ; 2.914 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2141 ; 6.213 ;15.422 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2142 ; 6.211 ;15.431 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NPO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083499. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : KURCHATOV SNC REMARK 200 BEAMLINE : K4.4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9815 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : GRAPHITE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43293 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3E8O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M SODIUM CHLORIDE, 10MM HEPES, 0.1M REMARK 280 SODIUM ACETATE, 2.6M AMMONIUM SULFATE, PH 5.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.30667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.61333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.96000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.26667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.65333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 MET A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 SER A 9 REMARK 465 PRO A 10 REMARK 465 GLN A 11 REMARK 465 HIS A 12 REMARK 465 PRO A 13 REMARK 465 ARG A 14 REMARK 465 ARG A 15 REMARK 465 THR A 16 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PRO B 3 REMARK 465 GLN B 4 REMARK 465 SER B 5 REMARK 465 MET B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 SER B 9 REMARK 465 PRO B 10 REMARK 465 GLN B 11 REMARK 465 HIS B 12 REMARK 465 PRO B 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 ARG B 15 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 44 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 47 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 102 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 47 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ASP B 74 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 18 158.77 163.83 REMARK 500 GLN B 63 81.42 -150.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 17 MET A 18 -147.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3E8O RELATED DB: PDB REMARK 900 RELATED ID: 4NPA RELATED DB: PDB DBREF 4NPO A 1 118 UNP Q9RSM4 Q9RSM4_DEIRA 1 118 DBREF 4NPO B 1 118 UNP Q9RSM4 Q9RSM4_DEIRA 1 118 SEQADV 4NPO HIS A -6 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS A -5 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS A -4 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS A -3 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS A -2 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS A -1 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO GLY A 0 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -6 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -5 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -4 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -3 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -2 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO HIS B -1 UNP Q9RSM4 EXPRESSION TAG SEQADV 4NPO GLY B 0 UNP Q9RSM4 EXPRESSION TAG SEQRES 1 A 125 HIS HIS HIS HIS HIS HIS GLY MET SER PRO GLN SER MET SEQRES 2 A 125 LEU THR SER PRO GLN HIS PRO ARG ARG THR THR MET VAL SEQRES 3 A 125 ILE SER HIS GLY THR LEU SER ALA SER ALA GLU HIS ALA SEQRES 4 A 125 ALA HIS LEU ARG GLN LEU LEU VAL HIS ILE ALA GLN ALA SEQRES 5 A 125 THR ARG GLN GLU ASP GLY CYS LEU LEU TYR LEU VAL SER SEQRES 6 A 125 GLU ASP LEU SER GLN PRO GLY HIS PHE LEU ILE THR GLU SEQRES 7 A 125 HIS TRP ASP ASN LEU GLY ALA MET HIS THR HIS LEU ALA SEQRES 8 A 125 LEU PRO GLY VAL THR GLN ALA ILE ASP ALA LEU LYS HIS SEQRES 9 A 125 LEU ASN VAL THR ASP LEU LYS ILE THR ALA TYR GLU ALA SEQRES 10 A 125 GLY GLU ALA ILE ASN ILE MET GLY SEQRES 1 B 125 HIS HIS HIS HIS HIS HIS GLY MET SER PRO GLN SER MET SEQRES 2 B 125 LEU THR SER PRO GLN HIS PRO ARG ARG THR THR MET VAL SEQRES 3 B 125 ILE SER HIS GLY THR LEU SER ALA SER ALA GLU HIS ALA SEQRES 4 B 125 ALA HIS LEU ARG GLN LEU LEU VAL HIS ILE ALA GLN ALA SEQRES 5 B 125 THR ARG GLN GLU ASP GLY CYS LEU LEU TYR LEU VAL SER SEQRES 6 B 125 GLU ASP LEU SER GLN PRO GLY HIS PHE LEU ILE THR GLU SEQRES 7 B 125 HIS TRP ASP ASN LEU GLY ALA MET HIS THR HIS LEU ALA SEQRES 8 B 125 LEU PRO GLY VAL THR GLN ALA ILE ASP ALA LEU LYS HIS SEQRES 9 B 125 LEU ASN VAL THR ASP LEU LYS ILE THR ALA TYR GLU ALA SEQRES 10 B 125 GLY GLU ALA ILE ASN ILE MET GLY HET ACT A 201 4 HET ACT A 202 4 HET GOL A 203 6 HET ACT B 201 4 HET SO4 B 202 5 HET ACE B 203 3 HET ACE B 204 3 HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM ACE ACETYL GROUP HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACT 3(C2 H3 O2 1-) FORMUL 5 GOL C3 H8 O3 FORMUL 7 SO4 O4 S 2- FORMUL 8 ACE 2(C2 H4 O) FORMUL 10 HOH *241(H2 O) HELIX 1 1 SER A 28 ARG A 47 1 20 HELIX 2 2 ASN A 75 LEU A 85 1 11 HELIX 3 3 LEU A 85 LEU A 98 1 14 HELIX 4 4 HIS B 31 ARG B 47 1 17 HELIX 5 5 ASN B 75 LEU B 85 1 11 HELIX 6 6 GLY B 87 LEU B 98 1 12 SHEET 1 A10 ILE A 114 MET A 117 0 SHEET 2 A10 LYS B 104 MET B 117 -1 O ALA B 107 N ILE A 114 SHEET 3 A10 VAL B 19 SER B 26 -1 N ILE B 20 O TYR B 108 SHEET 4 A10 HIS B 66 TRP B 73 -1 O PHE B 67 N LEU B 25 SHEET 5 A10 CYS B 52 ASP B 60 -1 N ASP B 60 O HIS B 66 SHEET 6 A10 CYS A 52 ASP A 60 -1 N GLU A 59 O GLU B 59 SHEET 7 A10 HIS A 66 TRP A 73 -1 O THR A 70 N LEU A 56 SHEET 8 A10 MET A 18 SER A 26 -1 N LEU A 25 O PHE A 67 SHEET 9 A10 LYS A 104 ALA A 110 -1 O THR A 106 N HIS A 22 SHEET 10 A10 LYS B 104 MET B 117 -1 O GLY B 111 N GLU A 109 SITE 1 AC1 5 TYR A 55 GLU A 71 HIS A 82 ILE A 105 SITE 2 AC1 5 HOH A 334 SITE 1 AC2 6 VAL A 100 THR A 101 ASP A 102 LEU A 103 SITE 2 AC2 6 HOH A 343 HOH A 409 SITE 1 AC3 6 SER A 28 GLU A 30 HIS A 31 ASN A 99 SITE 2 AC3 6 HOH A 339 HOH A 403 SITE 1 AC4 5 LYS B 96 VAL B 100 THR B 101 ASP B 102 SITE 2 AC4 5 LEU B 103 SITE 1 AC5 9 LYS A 96 PRO B 86 GLY B 87 VAL B 88 SITE 2 AC5 9 THR B 89 GLN B 90 HOH B 325 HOH B 340 SITE 3 AC5 9 HOH B 381 SITE 1 AC6 7 HIS A 80 HOH A 408 HOH A 418 GLY B 77 SITE 2 AC6 7 HIS B 80 THR B 81 HOH B 403 SITE 1 AC7 3 TYR B 55 GLU B 71 HIS B 82 CRYST1 80.390 80.390 69.920 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012439 0.007182 0.000000 0.00000 SCALE2 0.000000 0.014364 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014302 0.00000