HEADER CELL ADHESION 22-NOV-13 4NPS TITLE CRYSTAL STRUCTURE OF BEP1 PROTEIN (VIRB-TRANSLOCATED BARTONELLA TITLE 2 EFFECTOR PROTEIN) FROM BARTONELLA CLARRIDGEIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BARTONELLA EFFECTOR PROTEIN (BEP) SUBSTRATE OF VIRB T4SS; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA CLARRIDGEIAE; SOURCE 3 ORGANISM_TAXID: 696125; SOURCE 4 STRAIN: CIP 104772 / 73; SOURCE 5 GENE: BARCL_0069; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, FIC DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR D.M.DRANOW,J.ABENDROTH,T.E.EDWARDS,D.LORIMER,SEATTLE STRUCTURAL AUTHOR 2 GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 5 20-SEP-23 4NPS 1 REMARK REVDAT 4 24-AUG-22 4NPS 1 JRNL REVDAT 3 08-SEP-21 4NPS 1 JRNL REMARK SEQADV REVDAT 2 22-NOV-17 4NPS 1 REMARK REVDAT 1 08-OCT-14 4NPS 0 JRNL AUTH T.SCHIRMER,T.A.P.DE BEER,S.TAMEGGER,A.HARMS,N.DIETZ, JRNL AUTH 2 D.M.DRANOW,T.E.EDWARDS,P.J.MYLER,I.PHAN,C.DEHIO JRNL TITL EVOLUTIONARY DIVERSIFICATION OF HOST-TARGETED BARTONELLA JRNL TITL 2 EFFECTORS PROTEINS DERIVED FROM A CONSERVED FICTA JRNL TITL 3 TOXIN-ANTITOXIN MODULE. JRNL REF MICROORGANISMS V. 9 2021 JRNL REFN ESSN 2076-2607 JRNL PMID 34442725 JRNL DOI 10.3390/MICROORGANISMS9081645 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 28414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1435 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1946 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2163 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 161 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.43000 REMARK 3 B22 (A**2) : -0.81000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.122 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.513 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2238 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2086 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3041 ; 1.502 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4810 ; 0.846 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 289 ; 6.329 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;38.214 ;25.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 377 ;13.463 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;18.947 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 348 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2574 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 496 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 1.408 ; 1.872 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1134 ; 1.377 ; 1.862 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1419 ; 1.983 ; 2.781 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): 56.1521 5.9519 12.6433 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.0896 REMARK 3 T33: 0.1372 T12: 0.0208 REMARK 3 T13: -0.0192 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.1117 L22: 4.2719 REMARK 3 L33: 1.4354 L12: -0.3439 REMARK 3 L13: 0.4369 L23: -1.0058 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: 0.0215 S13: -0.0348 REMARK 3 S21: -0.2779 S22: -0.0179 S23: 0.1871 REMARK 3 S31: 0.0211 S32: -0.1452 S33: -0.0121 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 63.4503 16.1958 24.4576 REMARK 3 T TENSOR REMARK 3 T11: 0.1004 T22: 0.1131 REMARK 3 T33: 0.1275 T12: 0.0451 REMARK 3 T13: 0.0366 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 2.2243 L22: 2.6787 REMARK 3 L33: 1.4229 L12: 1.1610 REMARK 3 L13: 0.0057 L23: 0.4231 REMARK 3 S TENSOR REMARK 3 S11: 0.0612 S12: -0.2794 S13: 0.0505 REMARK 3 S21: 0.1086 S22: -0.0429 S23: 0.0488 REMARK 3 S31: -0.0858 S32: -0.0671 S33: -0.0183 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 192 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): 86.1040 20.9583 7.6109 REMARK 3 T TENSOR REMARK 3 T11: 0.1450 T22: 0.0675 REMARK 3 T33: 0.1085 T12: -0.0290 REMARK 3 T13: 0.0136 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.9737 L22: 1.5508 REMARK 3 L33: 1.9604 L12: 0.3011 REMARK 3 L13: -0.5466 L23: -0.6034 REMARK 3 S TENSOR REMARK 3 S11: -0.0820 S12: 0.0814 S13: 0.1071 REMARK 3 S21: -0.1908 S22: 0.0988 S23: 0.0112 REMARK 3 S31: -0.0272 S32: 0.0381 S33: -0.0168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: RESIDUAL ONLY. RESIDUES 313-558 ARE MISSING REMARK 3 IN THE ELECTRON DENSITY MAP REMARK 4 REMARK 4 4NPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083503. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28414 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 58.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: PDB ENTRY 2JK8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS(G5): 10% PEG-20,000, 20% PEG REMARK 280 MME 550, 0.1M MOPS/HEPES-NA, PH=7.5, 0.02M EACH SODIUM FORMATE, REMARK 280 AMMONIUM ACETATE, TRISODIUM CITRATE, SODIUM POTASSIUM L-TARTRATE, REMARK 280 SODIUM OXAMATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, REMARK 280 PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.59500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.59500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LYS A 3 REMARK 465 THR A 4 REMARK 465 LEU A 5 REMARK 465 SER A 6 REMARK 465 ASN A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ILE A 10 REMARK 465 ALA A 11 REMARK 465 THR A 12 REMARK 465 GLU A 13 REMARK 465 SER A 14 REMARK 465 ILE A 15 REMARK 465 SER A 16 REMARK 465 ASN A 17 REMARK 465 PRO A 107 REMARK 465 GLU A 108 REMARK 465 MET A 109 REMARK 465 ILE A 110 REMARK 465 ARG A 111 REMARK 465 SER A 112 REMARK 465 ASN A 113 REMARK 465 TRP A 114 REMARK 465 ARG A 115 REMARK 465 THR A 116 REMARK 465 GLU A 117 REMARK 465 GLN A 118 REMARK 465 PRO A 119 REMARK 465 ILE A 120 REMARK 465 LYS A 313 REMARK 465 GLN A 314 REMARK 465 ASN A 315 REMARK 465 ILE A 316 REMARK 465 GLU A 317 REMARK 465 ASN A 318 REMARK 465 THR A 319 REMARK 465 LEU A 320 REMARK 465 ILE A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 GLU A 324 REMARK 465 LYS A 325 REMARK 465 LEU A 326 REMARK 465 PRO A 327 REMARK 465 PRO A 328 REMARK 465 LEU A 329 REMARK 465 THR A 330 REMARK 465 LYS A 331 REMARK 465 ASN A 332 REMARK 465 ALA A 333 REMARK 465 ILE A 334 REMARK 465 ILE A 335 REMARK 465 GLU A 336 REMARK 465 ASN A 337 REMARK 465 ILE A 338 REMARK 465 LYS A 339 REMARK 465 LYS A 340 REMARK 465 ASP A 341 REMARK 465 THR A 342 REMARK 465 LEU A 343 REMARK 465 ILE A 344 REMARK 465 GLN A 345 REMARK 465 ALA A 346 REMARK 465 LYS A 347 REMARK 465 LEU A 348 REMARK 465 ARG A 349 REMARK 465 GLN A 350 REMARK 465 VAL A 351 REMARK 465 THR A 352 REMARK 465 HIS A 353 REMARK 465 LEU A 354 REMARK 465 SER A 355 REMARK 465 LYS A 356 REMARK 465 LEU A 357 REMARK 465 VAL A 358 REMARK 465 TYR A 359 REMARK 465 GLY A 360 REMARK 465 SER A 361 REMARK 465 SER A 362 REMARK 465 LYS A 363 REMARK 465 ILE A 364 REMARK 465 LEU A 365 REMARK 465 ASN A 366 REMARK 465 ASN A 367 REMARK 465 GLN A 368 REMARK 465 LEU A 369 REMARK 465 GLU A 370 REMARK 465 LEU A 371 REMARK 465 ILE A 372 REMARK 465 ASN A 373 REMARK 465 THR A 374 REMARK 465 ASN A 375 REMARK 465 GLN A 376 REMARK 465 LYS A 377 REMARK 465 SER A 378 REMARK 465 GLY A 379 REMARK 465 GLU A 380 REMARK 465 GLN A 381 REMARK 465 LEU A 382 REMARK 465 SER A 383 REMARK 465 ALA A 384 REMARK 465 GLN A 385 REMARK 465 ILE A 386 REMARK 465 THR A 387 REMARK 465 SER A 388 REMARK 465 SER A 389 REMARK 465 PRO A 390 REMARK 465 GLN A 391 REMARK 465 SER A 392 REMARK 465 ILE A 393 REMARK 465 SER A 394 REMARK 465 LYS A 395 REMARK 465 LEU A 396 REMARK 465 ALA A 397 REMARK 465 GLY A 398 REMARK 465 ILE A 399 REMARK 465 LYS A 400 REMARK 465 ILE A 401 REMARK 465 PHE A 402 REMARK 465 GLY A 403 REMARK 465 MET A 404 REMARK 465 LYS A 405 REMARK 465 ASN A 406 REMARK 465 SER A 407 REMARK 465 MET A 408 REMARK 465 ARG A 409 REMARK 465 LYS A 410 REMARK 465 LYS A 411 REMARK 465 ALA A 412 REMARK 465 GLU A 413 REMARK 465 ASP A 414 REMARK 465 ASN A 415 REMARK 465 ILE A 416 REMARK 465 ILE A 417 REMARK 465 LYS A 418 REMARK 465 LEU A 419 REMARK 465 ALA A 420 REMARK 465 ASN A 421 REMARK 465 SER A 422 REMARK 465 ILE A 423 REMARK 465 LYS A 424 REMARK 465 SER A 425 REMARK 465 TYR A 426 REMARK 465 GLY A 427 REMARK 465 SER A 428 REMARK 465 ALA A 429 REMARK 465 VAL A 430 REMARK 465 LYS A 431 REMARK 465 ASN A 432 REMARK 465 VAL A 433 REMARK 465 GLU A 434 REMARK 465 THR A 435 REMARK 465 THR A 436 REMARK 465 MET A 437 REMARK 465 ILE A 438 REMARK 465 GLN A 439 REMARK 465 GLN A 440 REMARK 465 HIS A 441 REMARK 465 LYS A 442 REMARK 465 SER A 443 REMARK 465 GLU A 444 REMARK 465 GLN A 445 REMARK 465 LYS A 446 REMARK 465 ARG A 447 REMARK 465 LEU A 448 REMARK 465 SER A 449 REMARK 465 LYS A 450 REMARK 465 THR A 451 REMARK 465 VAL A 452 REMARK 465 LYS A 453 REMARK 465 LEU A 454 REMARK 465 PRO A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 LYS A 458 REMARK 465 LEU A 459 REMARK 465 GLN A 460 REMARK 465 ASN A 461 REMARK 465 ILE A 462 REMARK 465 LEU A 463 REMARK 465 ASN A 464 REMARK 465 LEU A 465 REMARK 465 PRO A 466 REMARK 465 GLU A 467 REMARK 465 GLU A 468 REMARK 465 LYS A 469 REMARK 465 GLN A 470 REMARK 465 LYS A 471 REMARK 465 GLU A 472 REMARK 465 VAL A 473 REMARK 465 LEU A 474 REMARK 465 LEU A 475 REMARK 465 GLU A 476 REMARK 465 GLU A 477 REMARK 465 LYS A 478 REMARK 465 SER A 479 REMARK 465 LEU A 480 REMARK 465 ALA A 481 REMARK 465 SER A 482 REMARK 465 SER A 483 REMARK 465 ILE A 484 REMARK 465 GLY A 485 REMARK 465 LYS A 486 REMARK 465 GLU A 487 REMARK 465 LEU A 488 REMARK 465 THR A 489 REMARK 465 ASP A 490 REMARK 465 PHE A 491 REMARK 465 ILE A 492 REMARK 465 SER A 493 REMARK 465 SER A 494 REMARK 465 LEU A 495 REMARK 465 ASN A 496 REMARK 465 ALA A 497 REMARK 465 ARG A 498 REMARK 465 LEU A 499 REMARK 465 SER A 500 REMARK 465 PRO A 501 REMARK 465 SER A 502 REMARK 465 GLU A 503 REMARK 465 ARG A 504 REMARK 465 LYS A 505 REMARK 465 MET A 506 REMARK 465 ILE A 507 REMARK 465 LEU A 508 REMARK 465 GLU A 509 REMARK 465 SER A 510 REMARK 465 ASN A 511 REMARK 465 HIS A 512 REMARK 465 GLN A 513 REMARK 465 GLN A 514 REMARK 465 PHE A 515 REMARK 465 ALA A 516 REMARK 465 LYS A 517 REMARK 465 ASN A 518 REMARK 465 VAL A 519 REMARK 465 GLY A 520 REMARK 465 ILE A 521 REMARK 465 SER A 522 REMARK 465 GLU A 523 REMARK 465 SER A 524 REMARK 465 GLN A 525 REMARK 465 ALA A 526 REMARK 465 GLU A 527 REMARK 465 THR A 528 REMARK 465 ILE A 529 REMARK 465 ILE A 530 REMARK 465 LYS A 531 REMARK 465 THR A 532 REMARK 465 ALA A 533 REMARK 465 GLN A 534 REMARK 465 LYS A 535 REMARK 465 ALA A 536 REMARK 465 LYS A 537 REMARK 465 GLU A 538 REMARK 465 VAL A 539 REMARK 465 TYR A 540 REMARK 465 GLN A 541 REMARK 465 LYS A 542 REMARK 465 MET A 543 REMARK 465 GLN A 544 REMARK 465 LYS A 545 REMARK 465 PRO A 546 REMARK 465 ALA A 547 REMARK 465 VAL A 548 REMARK 465 ASP A 549 REMARK 465 LEU A 550 REMARK 465 THR A 551 REMARK 465 LYS A 552 REMARK 465 HIS A 553 REMARK 465 LEU A 554 REMARK 465 ILE A 555 REMARK 465 VAL A 556 REMARK 465 SER A 557 REMARK 465 GLY A 558 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 ILE A 121 CG1 CG2 CD1 REMARK 470 PHE A 122 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 126 CG OD1 ND2 REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 GLU A 295 CG CD OE1 OE2 REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 LYS A 301 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 212 O HOH A 855 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 122 -21.14 -155.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 105 MET A 106 124.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BACLA.17330.G RELATED DB: TARGETTRACK DBREF 4NPS A 1 558 UNP E6YFW2 E6YFW2_BARC7 1 558 SEQADV 4NPS MET A -7 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS ALA A -6 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A -5 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A -4 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A -3 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A -2 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A -1 UNP E6YFW2 EXPRESSION TAG SEQADV 4NPS HIS A 0 UNP E6YFW2 EXPRESSION TAG SEQRES 1 A 566 MET ALA HIS HIS HIS HIS HIS HIS MET GLU LYS THR LEU SEQRES 2 A 566 SER ASN ALA ALA ILE ALA THR GLU SER ILE SER ASN GLN SEQRES 3 A 566 ALA LEU PRO SER HIS TYR ASN TYR PRO ASN SER LEU THR SEQRES 4 A 566 LEU LYS ASN LYS TYR GLY ILE THR ASN HIS LYS ASP PHE SEQRES 5 A 566 THR ASN LYS CYS ALA HIS ASP SER ALA LYS ALA ALA ILE SEQRES 6 A 566 ASN LEU ARG GLN GLU GLU PRO PRO LYS LYS PHE ASP SER SEQRES 7 A 566 SER TYR LEU LYS TYR LEU HIS LYS GLN LEU PHE LYS GLU SEQRES 8 A 566 THR PHE GLU TRP ALA GLY HIS THR ARG ASP LEU PRO PHE SEQRES 9 A 566 THR PHE ALA ASP GLY THR VAL GLY VAL MET PRO GLU MET SEQRES 10 A 566 ILE ARG SER ASN TRP ARG THR GLU GLN PRO ILE ILE PHE SEQRES 11 A 566 ALA THR GLY ASN LYS VAL GLN ASP GLY LEU LYS ASN ILE SEQRES 12 A 566 ASP LYS MET LEU ILE GLU LYS ASN ASN LEU GLN GLY LEU SEQRES 13 A 566 SER HIS LYS GLU PHE ILE GLU ASN ILE ALA GLU ILE PHE SEQRES 14 A 566 ALA CYS LEU ASN TYR THR HIS PRO PHE ARG GLU GLY ASN SEQRES 15 A 566 GLY ARG THR GLN ARG ILE PHE CYS GLU LYS LEU ALA GLN SEQRES 16 A 566 ALA ALA GLY TYR TYR LEU ASP PHE SER VAL VAL THR LYS SEQRES 17 A 566 GLU ARG MET SER GLU ALA SER ILE THR ALA ALA GLN ASP SEQRES 18 A 566 SER ASN LEU GLU PRO MET LYS LYS LEU PHE ASP ASP ILE SEQRES 19 A 566 SER ASN PRO ILE LYS THR ALA VAL LEU LYS GLU CYS ILE SEQRES 20 A 566 ASN SER LEU LYS ASN ILE ASP HIS LYS ASN ILE ASN ASP SEQRES 21 A 566 CYS ILE ILE VAL ALA ALA ASP LYS GLY LEU THR TYR LYS SEQRES 22 A 566 GLY ILE TYR THR ASP ASN SER PRO ASP SER ILE ILE LEU SEQRES 23 A 566 LYS THR ASP ASN ILE TYR ILE ILE CYS SER LYS ASN ASP SEQRES 24 A 566 LEU ALA PRO GLU GLN LEU LYS THR LEU LYS LEU GLY ASP SEQRES 25 A 566 GLU CYS THR ILE THR VAL PRO MET LYS GLN ASN ILE GLU SEQRES 26 A 566 ASN THR LEU ILE PRO LYS GLU LYS LEU PRO PRO LEU THR SEQRES 27 A 566 LYS ASN ALA ILE ILE GLU ASN ILE LYS LYS ASP THR LEU SEQRES 28 A 566 ILE GLN ALA LYS LEU ARG GLN VAL THR HIS LEU SER LYS SEQRES 29 A 566 LEU VAL TYR GLY SER SER LYS ILE LEU ASN ASN GLN LEU SEQRES 30 A 566 GLU LEU ILE ASN THR ASN GLN LYS SER GLY GLU GLN LEU SEQRES 31 A 566 SER ALA GLN ILE THR SER SER PRO GLN SER ILE SER LYS SEQRES 32 A 566 LEU ALA GLY ILE LYS ILE PHE GLY MET LYS ASN SER MET SEQRES 33 A 566 ARG LYS LYS ALA GLU ASP ASN ILE ILE LYS LEU ALA ASN SEQRES 34 A 566 SER ILE LYS SER TYR GLY SER ALA VAL LYS ASN VAL GLU SEQRES 35 A 566 THR THR MET ILE GLN GLN HIS LYS SER GLU GLN LYS ARG SEQRES 36 A 566 LEU SER LYS THR VAL LYS LEU PRO SER THR LYS LEU GLN SEQRES 37 A 566 ASN ILE LEU ASN LEU PRO GLU GLU LYS GLN LYS GLU VAL SEQRES 38 A 566 LEU LEU GLU GLU LYS SER LEU ALA SER SER ILE GLY LYS SEQRES 39 A 566 GLU LEU THR ASP PHE ILE SER SER LEU ASN ALA ARG LEU SEQRES 40 A 566 SER PRO SER GLU ARG LYS MET ILE LEU GLU SER ASN HIS SEQRES 41 A 566 GLN GLN PHE ALA LYS ASN VAL GLY ILE SER GLU SER GLN SEQRES 42 A 566 ALA GLU THR ILE ILE LYS THR ALA GLN LYS ALA LYS GLU SEQRES 43 A 566 VAL TYR GLN LYS MET GLN LYS PRO ALA VAL ASP LEU THR SEQRES 44 A 566 LYS HIS LEU ILE VAL SER GLY HET ACT A 601 4 HET ACT A 602 4 HETNAM ACT ACETATE ION FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 HOH *161(H2 O) HELIX 1 1 LEU A 20 ASN A 25 5 6 HELIX 2 2 ASN A 40 GLU A 62 1 23 HELIX 3 3 ASP A 69 LYS A 82 1 14 HELIX 4 4 ASN A 126 LYS A 142 1 17 HELIX 5 5 ASN A 143 GLN A 146 5 4 HELIX 6 6 SER A 149 HIS A 168 1 20 HELIX 7 7 GLY A 173 GLY A 190 1 18 HELIX 8 8 ASP A 194 VAL A 198 5 5 HELIX 9 9 THR A 199 SER A 214 1 16 HELIX 10 10 LEU A 216 ASN A 228 1 13 HELIX 11 11 ASN A 228 LEU A 242 1 15 HELIX 12 12 ASN A 251 CYS A 253 5 3 HELIX 13 13 ASN A 290 LEU A 292 5 3 HELIX 14 14 ALA A 293 THR A 299 1 7 SHEET 1 A 2 PHE A 96 THR A 97 0 SHEET 2 A 2 VAL A 103 GLY A 104 -1 O GLY A 104 N PHE A 96 SHEET 1 B 2 ASN A 244 ILE A 245 0 SHEET 2 B 2 LYS A 248 ASN A 249 -1 O LYS A 248 N ILE A 245 SHEET 1 C 5 ILE A 255 ALA A 257 0 SHEET 2 C 5 ILE A 283 SER A 288 1 O ILE A 286 N VAL A 256 SHEET 3 C 5 SER A 275 THR A 280 -1 N LEU A 278 O ILE A 285 SHEET 4 C 5 THR A 263 ASN A 271 -1 N ILE A 267 O LYS A 279 SHEET 5 C 5 GLU A 305 THR A 309 -1 O ILE A 308 N TYR A 264 SITE 1 AC1 5 ASN A 28 GLU A 205 ILE A 254 HOH A 710 SITE 2 AC1 5 HOH A 715 SITE 1 AC2 3 SER A 196 THR A 199 ASN A 251 CRYST1 73.190 97.850 49.110 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013663 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020362 0.00000