HEADER CHAPERONE 23-NOV-13 4NQ0 TITLE STRUCTURAL INSIGHTS INTO YEAST HISTONE CHAPERONE HIF1: A SCAFFOLD TITLE 2 PROTEIN RECRUITING PROTEIN COMPLEXES TO CORE HISTONES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HAT1-INTERACTING FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HAT1-INTERACTING FACTOR 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: HIF1, YLL022C, L1205; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TPR, NASP HOMOLOGUE, SHNI-TPR, MEDIATING PROTEIN-PROTEIN KEYWDS 2 INTERACTIONS, HISTONE CHAPERONE, NUCLEUS, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,M.ZHANG,W.HE,Z.ZHU,M.TENG,Y.GAO,L.NIU REVDAT 3 20-MAR-24 4NQ0 1 SEQADV REVDAT 2 10-DEC-14 4NQ0 1 JRNL REVDAT 1 16-JUL-14 4NQ0 0 JRNL AUTH H.LIU,M.ZHANG,W.HE,Z.ZHU,M.TENG,Y.GAO,L.NIU JRNL TITL STRUCTURAL INSIGHTS INTO YEAST HISTONE CHAPERONE HIF1: A JRNL TITL 2 SCAFFOLD PROTEIN RECRUITING PROTEIN COMPLEXES TO CORE JRNL TITL 3 HISTONES JRNL REF BIOCHEM.J. V. 462 465 2014 JRNL REFN ISSN 0264-6021 JRNL PMID 24946827 JRNL DOI 10.1042/BJ20131640 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 17758 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 965 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1254 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2022 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.52000 REMARK 3 B22 (A**2) : 2.75000 REMARK 3 B33 (A**2) : -1.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.214 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.710 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2055 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1383 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2776 ; 1.001 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3383 ; 0.834 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 252 ; 4.655 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;39.152 ;25.140 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 372 ;16.643 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;16.343 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2292 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 392 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1269 ; 0.587 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 506 ; 0.091 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2033 ; 1.117 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 786 ; 1.517 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 743 ; 2.620 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3850 2.1060 -11.7430 REMARK 3 T TENSOR REMARK 3 T11: 0.0131 T22: 0.0656 REMARK 3 T33: 0.0478 T12: 0.0056 REMARK 3 T13: 0.0104 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.4399 L22: 0.2743 REMARK 3 L33: 1.2828 L12: 0.5717 REMARK 3 L13: 0.9373 L23: 0.5434 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: 0.0946 S13: -0.0032 REMARK 3 S21: -0.0050 S22: 0.0219 S23: 0.0115 REMARK 3 S31: 0.0027 S32: 0.0658 S33: 0.0109 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 467 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8260 0.7980 -9.3680 REMARK 3 T TENSOR REMARK 3 T11: 0.0430 T22: 0.0436 REMARK 3 T33: 0.0770 T12: 0.0147 REMARK 3 T13: 0.0162 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.3926 L22: 0.4648 REMARK 3 L33: 1.4304 L12: 0.6937 REMARK 3 L13: 1.2995 L23: 0.6487 REMARK 3 S TENSOR REMARK 3 S11: 0.0876 S12: -0.0150 S13: -0.1157 REMARK 3 S21: -0.0163 S22: 0.0011 S23: -0.1003 REMARK 3 S31: 0.0417 S32: -0.0596 S33: -0.0887 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18861 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.65600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE, 15% PEG4000, REMARK 280 PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.15400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.34450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.14000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.34450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.15400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.14000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 ASP A 7 REMARK 465 VAL A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 ASN A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 80 REMARK 465 ASN A 81 REMARK 465 LEU A 82 REMARK 465 PHE A 83 REMARK 465 GLY A 84 REMARK 465 ASP A 85 REMARK 465 ALA A 86 REMARK 465 LEU A 87 REMARK 465 LEU A 88 REMARK 465 ALA A 89 REMARK 465 GLY A 90 REMARK 465 ASP A 91 REMARK 465 ASP A 92 REMARK 465 GLY A 93 REMARK 465 SER A 94 REMARK 465 GLY A 95 REMARK 465 SER A 96 REMARK 465 GLU A 97 REMARK 465 SER A 98 REMARK 465 GLU A 99 REMARK 465 SER A 100 REMARK 465 GLU A 101 REMARK 465 PRO A 102 REMARK 465 GLU A 103 REMARK 465 SER A 104 REMARK 465 ASP A 105 REMARK 465 VAL A 106 REMARK 465 SER A 107 REMARK 465 ASN A 108 REMARK 465 GLY A 109 REMARK 465 GLU A 110 REMARK 465 GLU A 111 REMARK 465 GLY A 112 REMARK 465 ASN A 113 REMARK 465 GLU A 114 REMARK 465 ASN A 115 REMARK 465 GLY A 116 REMARK 465 GLN A 117 REMARK 465 THR A 118 REMARK 465 GLU A 119 REMARK 465 ILE A 120 REMARK 465 PRO A 121 REMARK 465 ASN A 122 REMARK 465 SER A 123 REMARK 465 ARG A 124 REMARK 465 MET A 125 REMARK 465 PHE A 126 REMARK 465 GLN A 127 REMARK 465 PHE A 128 REMARK 465 ASP A 129 REMARK 465 GLN A 130 REMARK 465 GLU A 131 REMARK 465 GLU A 132 REMARK 465 GLU A 133 REMARK 465 ASP A 134 REMARK 465 LEU A 135 REMARK 465 THR A 136 REMARK 465 GLY A 137 REMARK 465 ASP A 138 REMARK 465 VAL A 139 REMARK 465 ASP A 140 REMARK 465 SER A 141 REMARK 465 GLY A 142 REMARK 465 ASP A 143 REMARK 465 SER A 144 REMARK 465 GLU A 145 REMARK 465 ASP A 146 REMARK 465 SER A 147 REMARK 465 GLY A 148 REMARK 465 GLU A 149 REMARK 465 GLY A 150 REMARK 465 SER A 151 REMARK 465 GLU A 152 REMARK 465 GLU A 153 REMARK 465 GLU A 154 REMARK 465 GLU A 155 REMARK 465 GLU A 156 REMARK 465 ASN A 157 REMARK 465 VAL A 158 REMARK 465 GLU A 159 REMARK 465 GLY A 347 REMARK 465 SER A 348 REMARK 465 LYS A 349 REMARK 465 ARG A 350 REMARK 465 PRO A 351 REMARK 465 LEU A 352 REMARK 465 SER A 353 REMARK 465 GLN A 354 REMARK 465 PRO A 355 REMARK 465 THR A 356 REMARK 465 THR A 357 REMARK 465 SER A 358 REMARK 465 ILE A 359 REMARK 465 GLY A 360 REMARK 465 PHE A 361 REMARK 465 PRO A 362 REMARK 465 ALA A 363 REMARK 465 LEU A 364 REMARK 465 GLU A 365 REMARK 465 LYS A 366 REMARK 465 PRO A 367 REMARK 465 LEU A 368 REMARK 465 GLY A 369 REMARK 465 ASP A 370 REMARK 465 PHE A 371 REMARK 465 ASN A 372 REMARK 465 ASP A 373 REMARK 465 LEU A 374 REMARK 465 SER A 375 REMARK 465 GLN A 376 REMARK 465 LEU A 377 REMARK 465 VAL A 378 REMARK 465 LYS A 379 REMARK 465 LYS A 380 REMARK 465 LYS A 381 REMARK 465 PRO A 382 REMARK 465 ARG A 383 REMARK 465 ARG A 384 REMARK 465 HIS A 385 REMARK 465 LEU A 386 REMARK 465 GLU A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 HIS A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 14 OG REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 20 CD1 REMARK 470 ASP A 31 OD1 OD2 REMARK 470 LYS A 36 CE NZ REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 ASP A 55 OD1 OD2 REMARK 470 LYS A 160 CG CD CE NZ REMARK 470 GLU A 162 CD OE1 OE2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 ILE A 196 CD1 REMARK 470 GLN A 225 CD OE1 NE2 REMARK 470 LYS A 270 NZ REMARK 470 LYS A 299 CD CE NZ REMARK 470 LYS A 314 CE NZ REMARK 470 LYS A 321 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 31.25 -83.19 REMARK 500 ASN A 200 -128.25 56.54 REMARK 500 ASP A 223 2.10 -68.29 REMARK 500 ASP A 322 63.74 -100.09 REMARK 500 REMARK 500 REMARK: NULL DBREF 4NQ0 A 1 385 UNP Q12373 HIF1_YEAST 1 385 SEQADV 4NQ0 LEU A 386 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 GLU A 387 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 388 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 389 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 390 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 391 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 392 UNP Q12373 EXPRESSION TAG SEQADV 4NQ0 HIS A 393 UNP Q12373 EXPRESSION TAG SEQRES 1 A 393 MET LYS LEU ARG ALA GLU ASP VAL LEU ALA ASN GLY THR SEQRES 2 A 393 SER ARG HIS LYS VAL GLN ILE ASP MET GLU ARG GLN VAL SEQRES 3 A 393 GLN ILE ALA LYS ASP LEU LEU ALA GLN LYS LYS PHE LEU SEQRES 4 A 393 GLU ALA ALA LYS ARG CYS GLN GLN THR LEU ASP SER LEU SEQRES 5 A 393 PRO LYS ASP GLY LEU LEU PRO ASP PRO GLU LEU PHE THR SEQRES 6 A 393 ILE PHE ALA GLN ALA VAL TYR ASN MET GLU VAL GLN ASN SEQRES 7 A 393 SER GLY ASN LEU PHE GLY ASP ALA LEU LEU ALA GLY ASP SEQRES 8 A 393 ASP GLY SER GLY SER GLU SER GLU SER GLU PRO GLU SER SEQRES 9 A 393 ASP VAL SER ASN GLY GLU GLU GLY ASN GLU ASN GLY GLN SEQRES 10 A 393 THR GLU ILE PRO ASN SER ARG MET PHE GLN PHE ASP GLN SEQRES 11 A 393 GLU GLU GLU ASP LEU THR GLY ASP VAL ASP SER GLY ASP SEQRES 12 A 393 SER GLU ASP SER GLY GLU GLY SER GLU GLU GLU GLU GLU SEQRES 13 A 393 ASN VAL GLU LYS GLU GLU GLU ARG LEU ALA LEU HIS GLU SEQRES 14 A 393 LEU ALA ASN PHE SER PRO ALA ASN GLU HIS ASP ASP GLU SEQRES 15 A 393 ILE GLU ASP VAL SER GLN LEU ARG LYS SER GLY PHE HIS SEQRES 16 A 393 ILE TYR PHE GLU ASN ASP LEU TYR GLU ASN ALA LEU ASP SEQRES 17 A 393 LEU LEU ALA GLN ALA LEU MET LEU LEU GLY ARG PRO THR SEQRES 18 A 393 ALA ASP GLY GLN SER LEU THR GLU ASN SER ARG LEU ARG SEQRES 19 A 393 ILE GLY ASP VAL TYR ILE LEU MET GLY ASP ILE GLU ARG SEQRES 20 A 393 GLU ALA GLU MET PHE SER ARG ALA ILE HIS HIS TYR LEU SEQRES 21 A 393 LYS ALA LEU GLY TYR TYR LYS THR LEU LYS PRO ALA GLU SEQRES 22 A 393 GLN VAL THR GLU LYS VAL ILE GLN ALA GLU PHE LEU VAL SEQRES 23 A 393 CYS ASP ALA LEU ARG TRP VAL ASP GLN VAL PRO ALA LYS SEQRES 24 A 393 ASP LYS LEU LYS ARG PHE LYS HIS ALA LYS ALA LEU LEU SEQRES 25 A 393 GLU LYS HIS MET THR THR ARG PRO LYS ASP SER GLU LEU SEQRES 26 A 393 GLN GLN ALA ARG LEU ALA GLN ILE GLN ASP ASP ILE ASP SEQRES 27 A 393 GLU VAL GLN GLU ASN GLN GLN HIS GLY SER LYS ARG PRO SEQRES 28 A 393 LEU SER GLN PRO THR THR SER ILE GLY PHE PRO ALA LEU SEQRES 29 A 393 GLU LYS PRO LEU GLY ASP PHE ASN ASP LEU SER GLN LEU SEQRES 30 A 393 VAL LYS LYS LYS PRO ARG ARG HIS LEU GLU HIS HIS HIS SEQRES 31 A 393 HIS HIS HIS FORMUL 2 HOH *67(H2 O) HELIX 1 1 THR A 13 GLN A 35 1 23 HELIX 2 2 LYS A 37 LEU A 52 1 16 HELIX 3 3 ASP A 60 ASN A 78 1 19 HELIX 4 4 LYS A 160 ARG A 164 5 5 HELIX 5 5 ALA A 166 ASN A 172 5 7 HELIX 6 6 ASP A 185 LEU A 189 5 5 HELIX 7 7 GLY A 193 GLU A 199 5 7 HELIX 8 8 ASP A 201 ARG A 219 1 19 HELIX 9 9 THR A 228 ALA A 249 1 22 HELIX 10 10 MET A 251 LYS A 267 1 17 HELIX 11 11 ALA A 272 ARG A 291 1 20 HELIX 12 12 PRO A 297 THR A 317 1 21 HELIX 13 13 ASP A 322 ASN A 343 1 22 CRYST1 48.308 78.280 82.689 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020701 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012094 0.00000