HEADER LIGASE 26-NOV-13 4NR3 TITLE CRYSTAL STRUCTURE OF A HUMAN MMS2/UBC13 L121G MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DDVIT 1, ENTEROCYTE DIFFERENTIATION-ASSOCIATED FACTOR 1, COMPND 5 EDAF-1, ENTEROCYTE DIFFERENTIATION-PROMOTING FACTOR 1, EDPF-1, MMS2 COMPND 6 HOMOLOG, VITAMIN D3-INDUCIBLE PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 N; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: BENDLESS-LIKE UBIQUITIN-CONJUGATING ENZYME, UBC13, UBCH13, COMPND 12 UBIQUITIN CARRIER PROTEIN N, UBIQUITIN-PROTEIN LIGASE N; COMPND 13 EC: 6.3.2.19; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MMS2, UBE2V2, UEV2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIS-P1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: BLU, UBE2N; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHIS-P1 KEYWDS UBC13, MMS2, E2, UBIQUITIN CONJUGATING ENZYME, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR C.D.HODGE,R.A.EDWARDS,J.N.M.GLOVER REVDAT 4 20-SEP-23 4NR3 1 SEQADV REVDAT 3 22-NOV-17 4NR3 1 REMARK REVDAT 2 31-DEC-14 4NR3 1 JRNL REVDAT 1 10-DEC-14 4NR3 0 JRNL AUTH M.K.ROUT,C.D.HODGE,C.J.MARKIN,X.XU,J.N.GLOVER,W.XIAO, JRNL AUTH 2 L.SPYRACOPOULOS JRNL TITL STOCHASTIC GATE DYNAMICS REGULATE THE CATALYTIC ACTIVITY OF JRNL TITL 2 UBIQUITINATION ENZYMES. JRNL REF J.AM.CHEM.SOC. V. 136 17446 2014 JRNL REFN ISSN 0002-7863 JRNL PMID 25423605 JRNL DOI 10.1021/JA505440B REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 27783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.1322 - 3.8761 1.00 2918 143 0.1487 0.1602 REMARK 3 2 3.8761 - 3.0792 0.99 2749 143 0.1770 0.2251 REMARK 3 3 3.0792 - 2.6908 0.98 2679 157 0.2078 0.2839 REMARK 3 4 2.6908 - 2.4451 0.98 2663 157 0.1955 0.2472 REMARK 3 5 2.4451 - 2.2700 0.96 2622 146 0.1953 0.2646 REMARK 3 6 2.2700 - 2.1363 0.96 2559 166 0.2036 0.2519 REMARK 3 7 2.1363 - 2.0294 0.96 2596 127 0.2213 0.2689 REMARK 3 8 2.0294 - 1.9411 0.95 2551 145 0.2203 0.3007 REMARK 3 9 1.9411 - 1.8664 0.94 2529 126 0.2463 0.3102 REMARK 3 10 1.8664 - 1.8020 0.92 2456 151 0.2439 0.2837 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2431 REMARK 3 ANGLE : 1.127 3314 REMARK 3 CHIRALITY : 0.078 354 REMARK 3 PLANARITY : 0.005 442 REMARK 3 DIHEDRAL : 13.292 946 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8079 14.2434 18.9643 REMARK 3 T TENSOR REMARK 3 T11: 0.1772 T22: 0.1619 REMARK 3 T33: 0.1639 T12: 0.0049 REMARK 3 T13: -0.0338 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.6824 L22: 1.5824 REMARK 3 L33: 7.1941 L12: -0.3993 REMARK 3 L13: 0.2624 L23: 1.2002 REMARK 3 S TENSOR REMARK 3 S11: -0.1442 S12: -0.1370 S13: -0.1817 REMARK 3 S21: 0.4471 S22: -0.0501 S23: -0.0674 REMARK 3 S31: 0.5202 S32: 0.2891 S33: 0.1816 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6799 20.1809 11.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.0965 T22: 0.1001 REMARK 3 T33: 0.1264 T12: 0.0013 REMARK 3 T13: -0.0044 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.4383 L22: 1.8476 REMARK 3 L33: 3.9139 L12: -0.2022 REMARK 3 L13: 0.7254 L23: 0.1143 REMARK 3 S TENSOR REMARK 3 S11: -0.1595 S12: 0.0296 S13: 0.1156 REMARK 3 S21: 0.2091 S22: 0.0620 S23: -0.1050 REMARK 3 S31: -0.1086 S32: 0.3005 S33: 0.0550 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9975 23.4429 5.0652 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.0595 REMARK 3 T33: 0.1056 T12: 0.0099 REMARK 3 T13: 0.0018 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 5.9166 L22: 3.0702 REMARK 3 L33: 7.8429 L12: 0.1732 REMARK 3 L13: -0.9604 L23: -3.5516 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: -0.0303 S13: 0.4366 REMARK 3 S21: 0.1843 S22: -0.0833 S23: 0.0390 REMARK 3 S31: -0.3650 S32: 0.2559 S33: 0.1093 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0579 19.7973 9.5467 REMARK 3 T TENSOR REMARK 3 T11: 0.0932 T22: 0.1963 REMARK 3 T33: 0.1831 T12: 0.0461 REMARK 3 T13: 0.0034 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.3737 L22: 5.0528 REMARK 3 L33: 7.0268 L12: 2.0026 REMARK 3 L13: -0.4663 L23: -2.6072 REMARK 3 S TENSOR REMARK 3 S11: -0.1807 S12: -0.1991 S13: 0.3308 REMARK 3 S21: 0.2156 S22: 0.1755 S23: 0.6105 REMARK 3 S31: -0.2546 S32: -0.3800 S33: 0.0111 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9808 10.8095 13.2977 REMARK 3 T TENSOR REMARK 3 T11: 0.1115 T22: 0.1100 REMARK 3 T33: 0.1592 T12: 0.0046 REMARK 3 T13: 0.0221 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 3.1912 L22: 2.8130 REMARK 3 L33: 3.0147 L12: 1.0208 REMARK 3 L13: 3.0316 L23: 0.5084 REMARK 3 S TENSOR REMARK 3 S11: 0.1444 S12: -0.0341 S13: -0.2214 REMARK 3 S21: 0.3007 S22: 0.0680 S23: 0.0631 REMARK 3 S31: 0.2314 S32: -0.0406 S33: -0.1997 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8159 19.5816 -1.9912 REMARK 3 T TENSOR REMARK 3 T11: 0.0671 T22: 0.1960 REMARK 3 T33: 0.1143 T12: 0.0377 REMARK 3 T13: -0.0263 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 7.4353 L22: 7.2398 REMARK 3 L33: 7.7861 L12: 1.3988 REMARK 3 L13: -0.1196 L23: -0.3977 REMARK 3 S TENSOR REMARK 3 S11: -0.2655 S12: 0.2483 S13: 0.2094 REMARK 3 S21: -0.3086 S22: 0.2831 S23: 0.1519 REMARK 3 S31: -0.2606 S32: 0.2068 S33: 0.0324 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1668 11.3606 47.8444 REMARK 3 T TENSOR REMARK 3 T11: 0.5140 T22: 0.4787 REMARK 3 T33: 0.4729 T12: 0.0660 REMARK 3 T13: 0.0246 T23: 0.1801 REMARK 3 L TENSOR REMARK 3 L11: 3.9503 L22: 9.4262 REMARK 3 L33: 3.4613 L12: 5.1949 REMARK 3 L13: -3.2103 L23: -2.8213 REMARK 3 S TENSOR REMARK 3 S11: 0.1387 S12: -0.2354 S13: 0.6607 REMARK 3 S21: 0.3833 S22: -0.4947 S23: -0.3127 REMARK 3 S31: -0.1992 S32: 1.0768 S33: 0.3851 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5027 22.0761 44.2117 REMARK 3 T TENSOR REMARK 3 T11: 0.6361 T22: 0.3676 REMARK 3 T33: 0.3286 T12: -0.1315 REMARK 3 T13: -0.0015 T23: 0.0790 REMARK 3 L TENSOR REMARK 3 L11: 2.4345 L22: 3.7561 REMARK 3 L33: 1.2335 L12: 3.0240 REMARK 3 L13: 1.7328 L23: 2.1522 REMARK 3 S TENSOR REMARK 3 S11: 0.2969 S12: -0.3943 S13: 0.1653 REMARK 3 S21: 1.1243 S22: -0.3485 S23: 0.3309 REMARK 3 S31: -0.0656 S32: 0.0026 S33: 0.0389 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8607 28.6685 37.1523 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.1804 REMARK 3 T33: 0.1493 T12: 0.0296 REMARK 3 T13: -0.0701 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 5.6340 L22: 8.9560 REMARK 3 L33: 1.5829 L12: 5.8640 REMARK 3 L13: -1.4060 L23: 0.1044 REMARK 3 S TENSOR REMARK 3 S11: 0.3593 S12: -0.2226 S13: -0.0481 REMARK 3 S21: 0.6399 S22: -0.1080 S23: -0.2301 REMARK 3 S31: 0.1235 S32: -0.0194 S33: -0.2475 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3598 17.9973 32.5187 REMARK 3 T TENSOR REMARK 3 T11: 0.4147 T22: 0.2108 REMARK 3 T33: 0.2258 T12: 0.0541 REMARK 3 T13: 0.0006 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 3.4985 L22: 5.2202 REMARK 3 L33: 1.9397 L12: 0.6499 REMARK 3 L13: -0.9536 L23: -1.8628 REMARK 3 S TENSOR REMARK 3 S11: -0.3524 S12: -0.1763 S13: -0.5747 REMARK 3 S21: -0.5250 S22: 0.3170 S23: 0.2412 REMARK 3 S31: 0.8333 S32: 0.0412 S33: -0.0116 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4160 18.9340 33.5120 REMARK 3 T TENSOR REMARK 3 T11: 0.3195 T22: 0.3153 REMARK 3 T33: 0.3526 T12: 0.1136 REMARK 3 T13: -0.0472 T23: 0.0791 REMARK 3 L TENSOR REMARK 3 L11: 3.2890 L22: 5.4490 REMARK 3 L33: 4.0270 L12: 0.4258 REMARK 3 L13: -0.0010 L23: -2.1271 REMARK 3 S TENSOR REMARK 3 S11: -0.0704 S12: -0.5549 S13: -0.8328 REMARK 3 S21: 0.3397 S22: -0.0203 S23: -0.4323 REMARK 3 S31: 0.4479 S32: 0.3133 S33: 0.0627 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 114 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.0325 27.4697 22.9244 REMARK 3 T TENSOR REMARK 3 T11: 0.2765 T22: 0.4230 REMARK 3 T33: 0.6477 T12: 0.0566 REMARK 3 T13: 0.0263 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 3.8715 L22: 7.8753 REMARK 3 L33: 7.4325 L12: 2.0017 REMARK 3 L13: -0.1529 L23: 1.3216 REMARK 3 S TENSOR REMARK 3 S11: 0.2113 S12: 0.5803 S13: -0.8397 REMARK 3 S21: -0.6617 S22: -0.0506 S23: -0.7835 REMARK 3 S31: 0.5276 S32: 0.1154 S33: -0.1809 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2026 39.1395 28.3549 REMARK 3 T TENSOR REMARK 3 T11: 0.2229 T22: 0.1434 REMARK 3 T33: 0.2045 T12: 0.0029 REMARK 3 T13: 0.0134 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 3.1838 L22: 3.5894 REMARK 3 L33: 8.9244 L12: -3.2982 REMARK 3 L13: -2.8262 L23: 2.1217 REMARK 3 S TENSOR REMARK 3 S11: 0.2147 S12: -0.2662 S13: 0.2283 REMARK 3 S21: -0.0132 S22: 0.2075 S23: -0.3854 REMARK 3 S31: -0.2707 S32: 0.2319 S33: -0.4139 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1J7D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.1 M SODIUM CITRATE, PH REMARK 280 6.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.13050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.88050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.38100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.88050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.13050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.38100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 LEU A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 PHE A 5 REMARK 465 GLY B -6 REMARK 465 PRO B -5 REMARK 465 LEU B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 PRO B -1 REMARK 465 GLU B 0 REMARK 465 PHE B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 92 -91.74 -140.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NRI RELATED DB: PDB REMARK 900 RELATED ID: 4NRG RELATED DB: PDB DBREF 4NR3 A 6 145 UNP Q15819 UB2V2_HUMAN 6 145 DBREF 4NR3 B 2 150 UNP P61088 UBE2N_HUMAN 2 150 SEQADV 4NR3 GLY A -2 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 PRO A -1 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 LEU A 0 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 GLY A 1 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 SER A 2 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 PRO A 3 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 GLU A 4 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 PHE A 5 UNP Q15819 CLONING ARTIFACT SEQADV 4NR3 GLY B -6 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 PRO B -5 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 LEU B -4 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 GLY B -3 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 SER B -2 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 PRO B -1 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 GLU B 0 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 PHE B 1 UNP P61088 CLONING ARTIFACT SEQADV 4NR3 GLY B 121 UNP P61088 LEU 121 ENGINEERED MUTATION SEQRES 1 A 148 GLY PRO LEU GLY SER PRO GLU PHE GLY VAL LYS VAL PRO SEQRES 2 A 148 ARG ASN PHE ARG LEU LEU GLU GLU LEU GLU GLU GLY GLN SEQRES 3 A 148 LYS GLY VAL GLY ASP GLY THR VAL SER TRP GLY LEU GLU SEQRES 4 A 148 ASP ASP GLU ASP MET THR LEU THR ARG TRP THR GLY MET SEQRES 5 A 148 ILE ILE GLY PRO PRO ARG THR ASN TYR GLU ASN ARG ILE SEQRES 6 A 148 TYR SER LEU LYS VAL GLU CYS GLY PRO LYS TYR PRO GLU SEQRES 7 A 148 ALA PRO PRO SER VAL ARG PHE VAL THR LYS ILE ASN MET SEQRES 8 A 148 ASN GLY ILE ASN ASN SER SER GLY MET VAL ASP ALA ARG SEQRES 9 A 148 SER ILE PRO VAL LEU ALA LYS TRP GLN ASN SER TYR SER SEQRES 10 A 148 ILE LYS VAL VAL LEU GLN GLU LEU ARG ARG LEU MET MET SEQRES 11 A 148 SER LYS GLU ASN MET LYS LEU PRO GLN PRO PRO GLU GLY SEQRES 12 A 148 GLN THR TYR ASN ASN SEQRES 1 B 157 GLY PRO LEU GLY SER PRO GLU PHE ALA GLY LEU PRO ARG SEQRES 2 B 157 ARG ILE ILE LYS GLU THR GLN ARG LEU LEU ALA GLU PRO SEQRES 3 B 157 VAL PRO GLY ILE LYS ALA GLU PRO ASP GLU SER ASN ALA SEQRES 4 B 157 ARG TYR PHE HIS VAL VAL ILE ALA GLY PRO GLN ASP SER SEQRES 5 B 157 PRO PHE GLU GLY GLY THR PHE LYS LEU GLU LEU PHE LEU SEQRES 6 B 157 PRO GLU GLU TYR PRO MET ALA ALA PRO LYS VAL ARG PHE SEQRES 7 B 157 MET THR LYS ILE TYR HIS PRO ASN VAL ASP LYS LEU GLY SEQRES 8 B 157 ARG ILE CYS LEU ASP ILE LEU LYS ASP LYS TRP SER PRO SEQRES 9 B 157 ALA LEU GLN ILE ARG THR VAL LEU LEU SER ILE GLN ALA SEQRES 10 B 157 LEU LEU SER ALA PRO ASN PRO ASP ASP PRO GLY ALA ASN SEQRES 11 B 157 ASP VAL ALA GLU GLN TRP LYS THR ASN GLU ALA GLN ALA SEQRES 12 B 157 ILE GLU THR ALA ARG ALA TRP THR ARG LEU TYR ALA MET SEQRES 13 B 157 ASN FORMUL 3 HOH *161(H2 O) HELIX 1 1 PRO A 10 GLY A 25 1 16 HELIX 2 2 ASP A 99 SER A 102 5 4 HELIX 3 3 ILE A 103 LYS A 108 1 6 HELIX 4 4 SER A 114 MET A 127 1 14 HELIX 5 5 SER A 128 LYS A 133 1 6 HELIX 6 6 PRO B 5 GLU B 18 1 14 HELIX 7 7 LEU B 88 LYS B 92 5 5 HELIX 8 8 GLN B 100 ALA B 114 1 15 HELIX 9 9 ASP B 124 ASN B 132 1 9 HELIX 10 10 ASN B 132 ALA B 148 1 17 SHEET 1 A 4 VAL A 31 LEU A 35 0 SHEET 2 A 4 ARG A 45 ILE A 51 -1 O THR A 47 N GLY A 34 SHEET 3 A 4 ILE A 62 GLU A 68 -1 O VAL A 67 N TRP A 46 SHEET 4 A 4 SER A 79 PHE A 82 -1 O ARG A 81 N LYS A 66 SHEET 1 B 4 ILE B 23 PRO B 27 0 SHEET 2 B 4 TYR B 34 ALA B 40 -1 O HIS B 36 N GLU B 26 SHEET 3 B 4 THR B 51 PHE B 57 -1 O LEU B 56 N PHE B 35 SHEET 4 B 4 LYS B 68 PHE B 71 -1 O LYS B 68 N PHE B 57 CISPEP 1 TYR A 73 PRO A 74 0 -0.12 CISPEP 2 TYR B 62 PRO B 63 0 8.70 CRYST1 44.261 74.762 91.761 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022593 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013376 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010898 0.00000