data_4NTL # _entry.id 4NTL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NTL pdb_00004ntl 10.2210/pdb4ntl/pdb RCSB RCSB083639 ? ? WWPDB D_1000083639 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-420195 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4NTL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-12-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a lipoprotein, YaeC family (EF3198) from Enterococcus faecalis V583 at 1.80 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4NTL _cell.length_a 97.161 _cell.length_b 97.161 _cell.length_c 144.686 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NTL _symmetry.Int_Tables_number 97 _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lipoprotein, YaeC family' 27676.531 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 280 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'YaeC family lipoprotein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GDQKEDKEITVAVQLESSKDILEIAKKEAEKKGYKINI(MSE)EVSDNVAYNDAVQHDEADANFAQHQPF(MSE)E (MSE)FNKEKKADLVAVQPIYYFAGGFYSKEYQDAKDLPENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVAD VVENPKNITFESIDLLNLAKAYDEKDIA(MSE)VFCYPAYLEPAGLTTKDAILLEDKEASKHYALQVVTRKGEKDSEKIK VLKEA(MSE)TTKEVAEYIKKNSKGANIPAF ; _entity_poly.pdbx_seq_one_letter_code_can ;GDQKEDKEITVAVQLESSKDILEIAKKEAEKKGYKINIMEVSDNVAYNDAVQHDEADANFAQHQPFMEMFNKEKKADLVA VQPIYYFAGGFYSKEYQDAKDLPENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVADVVENPKNITFESIDLL NLAKAYDEKDIAMVFCYPAYLEPAGLTTKDAILLEDKEASKHYALQVVTRKGEKDSEKIKVLKEAMTTKEVAEYIKKNSK GANIPAF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-420195 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 GLN n 1 4 LYS n 1 5 GLU n 1 6 ASP n 1 7 LYS n 1 8 GLU n 1 9 ILE n 1 10 THR n 1 11 VAL n 1 12 ALA n 1 13 VAL n 1 14 GLN n 1 15 LEU n 1 16 GLU n 1 17 SER n 1 18 SER n 1 19 LYS n 1 20 ASP n 1 21 ILE n 1 22 LEU n 1 23 GLU n 1 24 ILE n 1 25 ALA n 1 26 LYS n 1 27 LYS n 1 28 GLU n 1 29 ALA n 1 30 GLU n 1 31 LYS n 1 32 LYS n 1 33 GLY n 1 34 TYR n 1 35 LYS n 1 36 ILE n 1 37 ASN n 1 38 ILE n 1 39 MSE n 1 40 GLU n 1 41 VAL n 1 42 SER n 1 43 ASP n 1 44 ASN n 1 45 VAL n 1 46 ALA n 1 47 TYR n 1 48 ASN n 1 49 ASP n 1 50 ALA n 1 51 VAL n 1 52 GLN n 1 53 HIS n 1 54 ASP n 1 55 GLU n 1 56 ALA n 1 57 ASP n 1 58 ALA n 1 59 ASN n 1 60 PHE n 1 61 ALA n 1 62 GLN n 1 63 HIS n 1 64 GLN n 1 65 PRO n 1 66 PHE n 1 67 MSE n 1 68 GLU n 1 69 MSE n 1 70 PHE n 1 71 ASN n 1 72 LYS n 1 73 GLU n 1 74 LYS n 1 75 LYS n 1 76 ALA n 1 77 ASP n 1 78 LEU n 1 79 VAL n 1 80 ALA n 1 81 VAL n 1 82 GLN n 1 83 PRO n 1 84 ILE n 1 85 TYR n 1 86 TYR n 1 87 PHE n 1 88 ALA n 1 89 GLY n 1 90 GLY n 1 91 PHE n 1 92 TYR n 1 93 SER n 1 94 LYS n 1 95 GLU n 1 96 TYR n 1 97 GLN n 1 98 ASP n 1 99 ALA n 1 100 LYS n 1 101 ASP n 1 102 LEU n 1 103 PRO n 1 104 GLU n 1 105 ASN n 1 106 ALA n 1 107 LYS n 1 108 VAL n 1 109 GLY n 1 110 ILE n 1 111 PRO n 1 112 SER n 1 113 ASP n 1 114 PRO n 1 115 THR n 1 116 ASN n 1 117 GLU n 1 118 GLY n 1 119 ARG n 1 120 ALA n 1 121 LEU n 1 122 ALA n 1 123 ILE n 1 124 LEU n 1 125 ASN n 1 126 ALA n 1 127 ASN n 1 128 GLY n 1 129 VAL n 1 130 ILE n 1 131 LYS n 1 132 LEU n 1 133 LYS n 1 134 GLU n 1 135 GLY n 1 136 VAL n 1 137 GLY n 1 138 PHE n 1 139 ASN n 1 140 GLY n 1 141 THR n 1 142 VAL n 1 143 ALA n 1 144 ASP n 1 145 VAL n 1 146 VAL n 1 147 GLU n 1 148 ASN n 1 149 PRO n 1 150 LYS n 1 151 ASN n 1 152 ILE n 1 153 THR n 1 154 PHE n 1 155 GLU n 1 156 SER n 1 157 ILE n 1 158 ASP n 1 159 LEU n 1 160 LEU n 1 161 ASN n 1 162 LEU n 1 163 ALA n 1 164 LYS n 1 165 ALA n 1 166 TYR n 1 167 ASP n 1 168 GLU n 1 169 LYS n 1 170 ASP n 1 171 ILE n 1 172 ALA n 1 173 MSE n 1 174 VAL n 1 175 PHE n 1 176 CYS n 1 177 TYR n 1 178 PRO n 1 179 ALA n 1 180 TYR n 1 181 LEU n 1 182 GLU n 1 183 PRO n 1 184 ALA n 1 185 GLY n 1 186 LEU n 1 187 THR n 1 188 THR n 1 189 LYS n 1 190 ASP n 1 191 ALA n 1 192 ILE n 1 193 LEU n 1 194 LEU n 1 195 GLU n 1 196 ASP n 1 197 LYS n 1 198 GLU n 1 199 ALA n 1 200 SER n 1 201 LYS n 1 202 HIS n 1 203 TYR n 1 204 ALA n 1 205 LEU n 1 206 GLN n 1 207 VAL n 1 208 VAL n 1 209 THR n 1 210 ARG n 1 211 LYS n 1 212 GLY n 1 213 GLU n 1 214 LYS n 1 215 ASP n 1 216 SER n 1 217 GLU n 1 218 LYS n 1 219 ILE n 1 220 LYS n 1 221 VAL n 1 222 LEU n 1 223 LYS n 1 224 GLU n 1 225 ALA n 1 226 MSE n 1 227 THR n 1 228 THR n 1 229 LYS n 1 230 GLU n 1 231 VAL n 1 232 ALA n 1 233 GLU n 1 234 TYR n 1 235 ILE n 1 236 LYS n 1 237 LYS n 1 238 ASN n 1 239 SER n 1 240 LYS n 1 241 GLY n 1 242 ALA n 1 243 ASN n 1 244 ILE n 1 245 PRO n 1 246 ALA n 1 247 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EF_3198, I574_00285, NP_816800.1, OO5_00380' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700802 / V583' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterococcus faecalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226185 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q82Z74_ENTFA _struct_ref.pdbx_db_accession Q82Z74 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DQKEDKEITVAVQLESSKDILEIAKKEAEKKGYKINIMEVSDNVAYNDAVQHDEADANFAQHQPFMEMFNKEKKADLVAV QPIYYFAGGFYSKEYQDAKDLPENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVADVVENPKNITFESIDLLN LAKAYDEKDIAMVFCYPAYLEPAGLTTKDAILLEDKEASKHYALQVVTRKGEKDSEKIKVLKEAMTTKEVAEYIKKNSKG ANIPAF ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NTL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 247 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q82Z74 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 272 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 27 _struct_ref_seq.pdbx_auth_seq_align_end 272 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4NTL _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q82Z74 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4NTL # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.08 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M zinc acetate, 10.0000% polyethylene glycol 8000, 0.1M MES pH 6.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC Q315' _diffrn_detector.details 'KOHZU: Double Crystal Si(111)' _diffrn_detector.pdbx_collection_date 2013-10-17 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979347 1.0 2 0.918401 1.0 3 0.979261 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_wavelength_list 0.979347,0.918401,0.979261 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4NTL _reflns.d_resolution_high 1.799 _reflns.d_resolution_low 29.013 _reflns.number_all 32421 _reflns.number_obs 32421 _reflns.pdbx_netI_over_sigmaI 11.300 _reflns.pdbx_Rsym_value 0.168 _reflns.pdbx_redundancy 13.800 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.799 1.850 ? 32237 ? 0.019 0.3 1.911 ? 13.600 ? 2366 100.000 1 1 1.850 1.900 ? 32419 ? 0.019 0.3 1.928 ? 14.100 ? 2302 100.000 2 1 1.900 1.950 ? 30080 ? 0.019 0.5 1.232 ? 13.400 ? 2243 100.000 3 1 1.950 2.010 ? 30794 ? 0.019 1.0 0.708 ? 14.300 ? 2160 100.000 4 1 2.010 2.080 ? 30109 ? 0.019 1.3 0.543 ? 14.100 ? 2131 100.000 5 1 2.080 2.150 ? 29050 ? 0.019 1.8 0.399 ? 14.200 ? 2041 100.000 6 1 2.150 2.230 ? 27846 ? 0.019 1.8 0.393 ? 14.000 ? 1983 100.000 7 1 2.230 2.320 ? 25521 ? 0.019 1.8 0.345 ? 13.400 ? 1909 100.000 8 1 2.320 2.430 ? 25906 ? 0.019 3.4 0.211 ? 14.200 ? 1828 100.000 9 1 2.430 2.550 ? 24649 ? 0.019 3.9 0.179 ? 14.100 ? 1748 100.000 10 1 2.550 2.680 ? 23512 ? 0.019 4.5 0.157 ? 14.100 ? 1671 100.000 11 1 2.680 2.850 ? 22236 ? 0.019 5.3 0.133 ? 14.000 ? 1584 100.000 12 1 2.850 3.040 ? 20744 ? 0.019 5.8 0.117 ? 13.800 ? 1498 100.000 13 1 3.040 3.290 ? 19247 ? 0.019 6.0 0.112 ? 13.800 ? 1396 100.000 14 1 3.290 3.600 ? 17259 ? 0.019 6.1 0.105 ? 13.300 ? 1293 100.000 15 1 3.600 4.020 ? 14803 ? 0.019 5.8 0.109 ? 12.500 ? 1184 100.000 16 1 4.020 4.650 ? 13618 ? 0.019 7.1 0.089 ? 13.000 ? 1045 100.000 17 1 4.650 5.690 ? 11892 ? 0.019 8.3 0.075 ? 13.200 ? 900 100.000 18 1 5.690 8.050 ? 9743 ? 0.019 8.9 0.069 ? 13.500 ? 720 100.000 19 1 8.050 29.013 ? 5160 ? 0.019 11.0 0.054 ? 12.300 ? 419 97.900 20 1 # _refine.entry_id 4NTL _refine.ls_d_res_high 1.7990 _refine.ls_d_res_low 29.013 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5200 _refine.ls_number_reflns_obs 32352 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 4.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. ZINC (ZN) FROM THE CRYSTALLIZATION SOLUTION HAS BEEN MODELED INTO THE STRUCTURE. THE MODELING OF ZINC IS SUPPORTED BY ANOMALOUS DIFFERENCE ELECTRON DENSITY MAPS.6. 1,2-ETHANEDIOL (EDO) USED AS A CRYOPROTECTANT WAS MODELED INTO THE STRUCTURE. 7.SODIUM (NA) FROM THE PURIFICATION BUFFER AND ACETATE (ACT) FROM THE CRYSTALLIZATION HAVE BEEN MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1807 _refine.ls_R_factor_R_work 0.1790 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2126 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1640 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.1971 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.1500 _refine.aniso_B[2][2] 0.1500 _refine.aniso_B[3][3] -0.3100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9460 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1070 _refine.pdbx_overall_ESU_R_Free 0.1060 _refine.overall_SU_ML 0.0730 _refine.overall_SU_B 4.3260 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 115.290 _refine.B_iso_min 11.650 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.330 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1886 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 280 _refine_hist.number_atoms_total 2192 _refine_hist.d_res_high 1.7990 _refine_hist.d_res_low 29.013 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2036 0.013 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1989 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2766 1.547 1.994 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4636 0.807 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 275 5.859 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 94 42.452 27.128 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 367 14.308 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 2 3.914 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 311 0.092 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2337 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 407 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1006 3.253 3.957 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1003 3.204 3.949 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1263 4.191 7.366 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7990 _refine_ls_shell.d_res_low 1.8450 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.9800 _refine_ls_shell.number_reflns_R_work 2161 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3090 _refine_ls_shell.R_factor_R_free 0.3300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 122 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2283 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NTL _struct.title 'Crystal structure of a lipoprotein, YaeC family (EF3198) from Enterococcus faecalis V583 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NLPA lipoprotein, PF03180 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.entry_id 4NTL # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 15 ? LYS A 32 ? LEU A 40 LYS A 57 1 ? 18 HELX_P HELX_P2 2 VAL A 45 ? HIS A 53 ? VAL A 70 HIS A 78 1 ? 9 HELX_P HELX_P3 3 GLN A 64 ? LYS A 75 ? GLN A 89 LYS A 100 1 ? 12 HELX_P HELX_P4 4 ASP A 98 ? LEU A 102 ? ASP A 123 LEU A 127 5 ? 5 HELX_P HELX_P5 5 ASP A 113 ? ASN A 127 ? ASP A 138 ASN A 152 1 ? 15 HELX_P HELX_P6 6 THR A 141 ? ALA A 143 ? THR A 166 ALA A 168 5 ? 3 HELX_P HELX_P7 7 ASP A 158 ? LEU A 160 ? ASP A 183 LEU A 185 5 ? 3 HELX_P HELX_P8 8 ASN A 161 ? TYR A 166 ? ASN A 186 TYR A 191 1 ? 6 HELX_P HELX_P9 9 TYR A 177 ? GLU A 182 ? TYR A 202 GLU A 207 5 ? 6 HELX_P HELX_P10 10 THR A 187 ? ALA A 191 ? THR A 212 ALA A 216 5 ? 5 HELX_P HELX_P11 11 ASP A 196 ? TYR A 203 ? ASP A 221 TYR A 228 1 ? 8 HELX_P HELX_P12 12 GLY A 212 ? LYS A 214 ? GLY A 237 LYS A 239 5 ? 3 HELX_P HELX_P13 13 SER A 216 ? MSE A 226 ? SER A 241 MSE A 251 1 ? 11 HELX_P HELX_P14 14 THR A 228 ? SER A 239 ? THR A 253 SER A 264 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ILE 38 C ? ? ? 1_555 A MSE 39 N ? ? A ILE 63 A MSE 64 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 39 C ? ? ? 1_555 A GLU 40 N ? ? A MSE 64 A GLU 65 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A PHE 66 C ? ? ? 1_555 A MSE 67 N ? ? A PHE 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 67 C ? ? ? 1_555 A GLU 68 N ? ? A MSE 92 A GLU 93 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale5 covale both ? A GLU 68 C ? ? ? 1_555 A MSE 69 N ? ? A GLU 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 69 C ? ? ? 1_555 A PHE 70 N ? ? A MSE 94 A PHE 95 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? A ALA 172 C ? ? ? 1_555 A MSE 173 N ? ? A ALA 197 A MSE 198 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale8 covale both ? A MSE 173 C ? ? ? 1_555 A VAL 174 N ? ? A MSE 198 A VAL 199 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A ALA 225 C ? ? ? 1_555 A MSE 226 N ? ? A ALA 250 A MSE 251 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale10 covale both ? A MSE 226 C ? ? ? 1_555 A THR 227 N ? ? A MSE 251 A THR 252 1_555 ? ? ? ? ? ? ? 1.346 ? ? metalc1 metalc ? ? A GLU 16 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 41 A ZN 301 1_555 ? ? ? ? ? ? ? 1.913 ? ? metalc2 metalc ? ? A ASP 20 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 45 A ZN 301 1_555 ? ? ? ? ? ? ? 2.093 ? ? metalc3 metalc ? ? A GLU 28 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 53 A ZN 302 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc4 metalc ? ? A ASP 49 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 74 A ZN 303 1_555 ? ? ? ? ? ? ? 1.739 ? ? metalc5 metalc ? ? A HIS 53 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 78 A ZN 303 1_555 ? ? ? ? ? ? ? 2.100 ? ? metalc6 metalc ? ? A GLU 55 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 80 A ZN 303 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc7 metalc ? ? A GLU 168 OE2 ? ? ? 1_555 L NA . NA ? ? A GLU 193 A NA 311 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc8 metalc ? ? A ASP 170 OD2 ? ? ? 1_555 L NA . NA ? ? A ASP 195 A NA 311 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc9 metalc ? ? A ASP 170 OD1 ? ? ? 1_555 L NA . NA ? ? A ASP 195 A NA 311 1_555 ? ? ? ? ? ? ? 2.875 ? ? metalc10 metalc ? ? A HIS 202 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 227 A ZN 304 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc11 metalc ? ? A PHE 247 OXT ? ? ? 1_555 F ZN . ZN ? ? A PHE 272 A ZN 305 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc12 metalc ? ? C ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 302 A HOH 680 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc13 metalc ? ? E ZN . ZN ? ? ? 1_555 K ACT . O ? ? A ZN 304 A ACT 310 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc14 metalc ? ? E ZN . ZN ? ? ? 1_555 K ACT . OXT ? ? A ZN 304 A ACT 310 1_555 ? ? ? ? ? ? ? 2.635 ? ? metalc15 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 304 A HOH 672 1_555 ? ? ? ? ? ? ? 1.827 ? ? metalc16 metalc ? ? L NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 311 A HOH 615 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc17 metalc ? ? L NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 311 A HOH 676 1_555 ? ? ? ? ? ? ? 2.051 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 35 ? GLU A 40 ? LYS A 60 GLU A 65 A 2 GLU A 8 ? VAL A 13 ? GLU A 33 VAL A 38 A 3 ALA A 58 ? HIS A 63 ? ALA A 83 HIS A 88 A 4 LEU A 205 ? ARG A 210 ? LEU A 230 ARG A 235 A 5 LEU A 78 ? TYR A 86 ? LEU A 103 TYR A 111 A 6 ILE A 244 ? PRO A 245 ? ILE A 269 PRO A 270 B 1 THR A 153 ? ILE A 157 ? THR A 178 ILE A 182 B 2 LYS A 107 ? PRO A 111 ? LYS A 132 PRO A 136 B 3 ILE A 171 ? CYS A 176 ? ILE A 196 CYS A 201 B 4 GLY A 90 ? TYR A 92 ? GLY A 115 TYR A 117 B 5 LEU A 193 ? LEU A 194 ? LEU A 218 LEU A 219 C 1 LYS A 131 ? LEU A 132 ? LYS A 156 LEU A 157 C 2 VAL A 145 ? GLU A 147 ? VAL A 170 GLU A 172 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O MSE A 39 ? O MSE A 64 N VAL A 13 ? N VAL A 38 A 2 3 N ALA A 12 ? N ALA A 37 O ALA A 58 ? O ALA A 83 A 3 4 N GLN A 62 ? N GLN A 87 O GLN A 206 ? O GLN A 231 A 4 5 O VAL A 207 ? O VAL A 232 N VAL A 81 ? N VAL A 106 A 5 6 N TYR A 86 ? N TYR A 111 O ILE A 244 ? O ILE A 269 B 1 2 O GLU A 155 ? O GLU A 180 N ILE A 110 ? N ILE A 135 B 2 3 N GLY A 109 ? N GLY A 134 O MSE A 173 ? O MSE A 198 B 3 4 O CYS A 176 ? O CYS A 201 N GLY A 90 ? N GLY A 115 B 4 5 N PHE A 91 ? N PHE A 116 O LEU A 193 ? O LEU A 218 C 1 2 N LYS A 131 ? N LYS A 156 O VAL A 146 ? O VAL A 171 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 301 ? 4 'BINDING SITE FOR RESIDUE ZN A 301' AC2 Software A ZN 302 ? 4 'BINDING SITE FOR RESIDUE ZN A 302' AC3 Software A ZN 303 ? 4 'BINDING SITE FOR RESIDUE ZN A 303' AC4 Software A ZN 304 ? 4 'BINDING SITE FOR RESIDUE ZN A 304' AC5 Software A ZN 305 ? 4 'BINDING SITE FOR RESIDUE ZN A 305' AC6 Software A EDO 306 ? 6 'BINDING SITE FOR RESIDUE EDO A 306' AC7 Software A EDO 307 ? 9 'BINDING SITE FOR RESIDUE EDO A 307' AC8 Software A EDO 308 ? 6 'BINDING SITE FOR RESIDUE EDO A 308' AC9 Software A ACT 309 ? 5 'BINDING SITE FOR RESIDUE ACT A 309' BC1 Software A ACT 310 ? 6 'BINDING SITE FOR RESIDUE ACT A 310' BC2 Software A NA 311 ? 4 'BINDING SITE FOR RESIDUE NA A 311' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 16 ? GLU A 41 . ? 1_555 ? 2 AC1 4 GLU A 16 ? GLU A 41 . ? 16_555 ? 3 AC1 4 ASP A 20 ? ASP A 45 . ? 1_555 ? 4 AC1 4 ASP A 20 ? ASP A 45 . ? 16_555 ? 5 AC2 4 GLU A 28 ? GLU A 53 . ? 1_555 ? 6 AC2 4 GLU A 95 ? GLU A 120 . ? 4_555 ? 7 AC2 4 HOH M . ? HOH A 599 . ? 4_555 ? 8 AC2 4 HOH M . ? HOH A 680 . ? 1_555 ? 9 AC3 4 ASP A 49 ? ASP A 74 . ? 1_555 ? 10 AC3 4 HIS A 53 ? HIS A 78 . ? 1_555 ? 11 AC3 4 GLU A 55 ? GLU A 80 . ? 1_555 ? 12 AC3 4 GLU A 155 ? GLU A 180 . ? 2_565 ? 13 AC4 4 GLU A 134 ? GLU A 159 . ? 5_555 ? 14 AC4 4 HIS A 202 ? HIS A 227 . ? 1_555 ? 15 AC4 4 ACT K . ? ACT A 310 . ? 1_555 ? 16 AC4 4 HOH M . ? HOH A 672 . ? 1_555 ? 17 AC5 4 ASP A 98 ? ASP A 123 . ? 4_555 ? 18 AC5 4 ASP A 101 ? ASP A 126 . ? 4_555 ? 19 AC5 4 PHE A 247 ? PHE A 272 . ? 1_555 ? 20 AC5 4 ACT J . ? ACT A 309 . ? 4_555 ? 21 AC6 6 GLU A 28 ? GLU A 53 . ? 1_555 ? 22 AC6 6 GLU A 95 ? GLU A 120 . ? 4_555 ? 23 AC6 6 THR A 228 ? THR A 253 . ? 1_555 ? 24 AC6 6 LYS A 229 ? LYS A 254 . ? 1_555 ? 25 AC6 6 GLU A 230 ? GLU A 255 . ? 1_555 ? 26 AC6 6 HOH M . ? HOH A 622 . ? 1_555 ? 27 AC7 9 ALA A 61 ? ALA A 86 . ? 1_555 ? 28 AC7 9 GLN A 62 ? GLN A 87 . ? 1_555 ? 29 AC7 9 HIS A 63 ? HIS A 88 . ? 1_555 ? 30 AC7 9 PHE A 66 ? PHE A 91 . ? 1_555 ? 31 AC7 9 LEU A 205 ? LEU A 230 . ? 1_555 ? 32 AC7 9 HOH M . ? HOH A 503 . ? 1_555 ? 33 AC7 9 HOH M . ? HOH A 538 . ? 1_555 ? 34 AC7 9 HOH M . ? HOH A 576 . ? 1_555 ? 35 AC7 9 HOH M . ? HOH A 590 . ? 1_555 ? 36 AC8 6 VAL A 51 ? VAL A 76 . ? 1_555 ? 37 AC8 6 ASP A 54 ? ASP A 79 . ? 1_555 ? 38 AC8 6 ALA A 56 ? ALA A 81 . ? 1_555 ? 39 AC8 6 ARG A 210 ? ARG A 235 . ? 1_555 ? 40 AC8 6 GLU A 213 ? GLU A 238 . ? 1_555 ? 41 AC8 6 HOH M . ? HOH A 551 . ? 1_555 ? 42 AC9 5 ASP A 98 ? ASP A 123 . ? 1_555 ? 43 AC9 5 ASP A 101 ? ASP A 126 . ? 1_555 ? 44 AC9 5 PHE A 247 ? PHE A 272 . ? 3_555 ? 45 AC9 5 ZN F . ? ZN A 305 . ? 3_555 ? 46 AC9 5 HOH M . ? HOH A 468 . ? 1_555 ? 47 BC1 6 GLU A 134 ? GLU A 159 . ? 5_555 ? 48 BC1 6 HIS A 202 ? HIS A 227 . ? 1_555 ? 49 BC1 6 ZN E . ? ZN A 304 . ? 1_555 ? 50 BC1 6 HOH M . ? HOH A 448 . ? 1_555 ? 51 BC1 6 HOH M . ? HOH A 528 . ? 1_555 ? 52 BC1 6 HOH M . ? HOH A 672 . ? 1_555 ? 53 BC2 4 GLU A 168 ? GLU A 193 . ? 1_555 ? 54 BC2 4 ASP A 170 ? ASP A 195 . ? 1_555 ? 55 BC2 4 HOH M . ? HOH A 615 . ? 1_555 ? 56 BC2 4 HOH M . ? HOH A 676 . ? 1_555 ? # _atom_sites.entry_id 4NTL _atom_sites.fract_transf_matrix[1][1] 0.010292 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010292 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006912 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ASP 2 27 ? ? ? A . n A 1 3 GLN 3 28 ? ? ? A . n A 1 4 LYS 4 29 ? ? ? A . n A 1 5 GLU 5 30 ? ? ? A . n A 1 6 ASP 6 31 31 ASP ASP A . n A 1 7 LYS 7 32 32 LYS LYS A . n A 1 8 GLU 8 33 33 GLU GLU A . n A 1 9 ILE 9 34 34 ILE ILE A . n A 1 10 THR 10 35 35 THR THR A . n A 1 11 VAL 11 36 36 VAL VAL A . n A 1 12 ALA 12 37 37 ALA ALA A . n A 1 13 VAL 13 38 38 VAL VAL A . n A 1 14 GLN 14 39 39 GLN GLN A . n A 1 15 LEU 15 40 40 LEU LEU A . n A 1 16 GLU 16 41 41 GLU GLU A . n A 1 17 SER 17 42 42 SER SER A . n A 1 18 SER 18 43 43 SER SER A . n A 1 19 LYS 19 44 44 LYS LYS A . n A 1 20 ASP 20 45 45 ASP ASP A . n A 1 21 ILE 21 46 46 ILE ILE A . n A 1 22 LEU 22 47 47 LEU LEU A . n A 1 23 GLU 23 48 48 GLU GLU A . n A 1 24 ILE 24 49 49 ILE ILE A . n A 1 25 ALA 25 50 50 ALA ALA A . n A 1 26 LYS 26 51 51 LYS LYS A . n A 1 27 LYS 27 52 52 LYS LYS A . n A 1 28 GLU 28 53 53 GLU GLU A . n A 1 29 ALA 29 54 54 ALA ALA A . n A 1 30 GLU 30 55 55 GLU GLU A . n A 1 31 LYS 31 56 56 LYS LYS A . n A 1 32 LYS 32 57 57 LYS LYS A . n A 1 33 GLY 33 58 58 GLY GLY A . n A 1 34 TYR 34 59 59 TYR TYR A . n A 1 35 LYS 35 60 60 LYS LYS A . n A 1 36 ILE 36 61 61 ILE ILE A . n A 1 37 ASN 37 62 62 ASN ASN A . n A 1 38 ILE 38 63 63 ILE ILE A . n A 1 39 MSE 39 64 64 MSE MSE A . n A 1 40 GLU 40 65 65 GLU GLU A . n A 1 41 VAL 41 66 66 VAL VAL A . n A 1 42 SER 42 67 67 SER SER A . n A 1 43 ASP 43 68 68 ASP ASP A . n A 1 44 ASN 44 69 69 ASN ASN A . n A 1 45 VAL 45 70 70 VAL VAL A . n A 1 46 ALA 46 71 71 ALA ALA A . n A 1 47 TYR 47 72 72 TYR TYR A . n A 1 48 ASN 48 73 73 ASN ASN A . n A 1 49 ASP 49 74 74 ASP ASP A . n A 1 50 ALA 50 75 75 ALA ALA A . n A 1 51 VAL 51 76 76 VAL VAL A . n A 1 52 GLN 52 77 77 GLN GLN A . n A 1 53 HIS 53 78 78 HIS HIS A . n A 1 54 ASP 54 79 79 ASP ASP A . n A 1 55 GLU 55 80 80 GLU GLU A . n A 1 56 ALA 56 81 81 ALA ALA A . n A 1 57 ASP 57 82 82 ASP ASP A . n A 1 58 ALA 58 83 83 ALA ALA A . n A 1 59 ASN 59 84 84 ASN ASN A . n A 1 60 PHE 60 85 85 PHE PHE A . n A 1 61 ALA 61 86 86 ALA ALA A . n A 1 62 GLN 62 87 87 GLN GLN A . n A 1 63 HIS 63 88 88 HIS HIS A . n A 1 64 GLN 64 89 89 GLN GLN A . n A 1 65 PRO 65 90 90 PRO PRO A . n A 1 66 PHE 66 91 91 PHE PHE A . n A 1 67 MSE 67 92 92 MSE MSE A . n A 1 68 GLU 68 93 93 GLU GLU A . n A 1 69 MSE 69 94 94 MSE MSE A . n A 1 70 PHE 70 95 95 PHE PHE A . n A 1 71 ASN 71 96 96 ASN ASN A . n A 1 72 LYS 72 97 97 LYS LYS A . n A 1 73 GLU 73 98 98 GLU GLU A . n A 1 74 LYS 74 99 99 LYS LYS A . n A 1 75 LYS 75 100 100 LYS LYS A . n A 1 76 ALA 76 101 101 ALA ALA A . n A 1 77 ASP 77 102 102 ASP ASP A . n A 1 78 LEU 78 103 103 LEU LEU A . n A 1 79 VAL 79 104 104 VAL VAL A . n A 1 80 ALA 80 105 105 ALA ALA A . n A 1 81 VAL 81 106 106 VAL VAL A . n A 1 82 GLN 82 107 107 GLN GLN A . n A 1 83 PRO 83 108 108 PRO PRO A . n A 1 84 ILE 84 109 109 ILE ILE A . n A 1 85 TYR 85 110 110 TYR TYR A . n A 1 86 TYR 86 111 111 TYR TYR A . n A 1 87 PHE 87 112 112 PHE PHE A . n A 1 88 ALA 88 113 113 ALA ALA A . n A 1 89 GLY 89 114 114 GLY GLY A . n A 1 90 GLY 90 115 115 GLY GLY A . n A 1 91 PHE 91 116 116 PHE PHE A . n A 1 92 TYR 92 117 117 TYR TYR A . n A 1 93 SER 93 118 118 SER SER A . n A 1 94 LYS 94 119 119 LYS LYS A . n A 1 95 GLU 95 120 120 GLU GLU A . n A 1 96 TYR 96 121 121 TYR TYR A . n A 1 97 GLN 97 122 122 GLN GLN A . n A 1 98 ASP 98 123 123 ASP ASP A . n A 1 99 ALA 99 124 124 ALA ALA A . n A 1 100 LYS 100 125 125 LYS LYS A . n A 1 101 ASP 101 126 126 ASP ASP A . n A 1 102 LEU 102 127 127 LEU LEU A . n A 1 103 PRO 103 128 128 PRO PRO A . n A 1 104 GLU 104 129 129 GLU GLU A . n A 1 105 ASN 105 130 130 ASN ASN A . n A 1 106 ALA 106 131 131 ALA ALA A . n A 1 107 LYS 107 132 132 LYS LYS A . n A 1 108 VAL 108 133 133 VAL VAL A . n A 1 109 GLY 109 134 134 GLY GLY A . n A 1 110 ILE 110 135 135 ILE ILE A . n A 1 111 PRO 111 136 136 PRO PRO A . n A 1 112 SER 112 137 137 SER SER A . n A 1 113 ASP 113 138 138 ASP ASP A . n A 1 114 PRO 114 139 139 PRO PRO A . n A 1 115 THR 115 140 140 THR THR A . n A 1 116 ASN 116 141 141 ASN ASN A . n A 1 117 GLU 117 142 142 GLU GLU A . n A 1 118 GLY 118 143 143 GLY GLY A . n A 1 119 ARG 119 144 144 ARG ARG A . n A 1 120 ALA 120 145 145 ALA ALA A . n A 1 121 LEU 121 146 146 LEU LEU A . n A 1 122 ALA 122 147 147 ALA ALA A . n A 1 123 ILE 123 148 148 ILE ILE A . n A 1 124 LEU 124 149 149 LEU LEU A . n A 1 125 ASN 125 150 150 ASN ASN A . n A 1 126 ALA 126 151 151 ALA ALA A . n A 1 127 ASN 127 152 152 ASN ASN A . n A 1 128 GLY 128 153 153 GLY GLY A . n A 1 129 VAL 129 154 154 VAL VAL A . n A 1 130 ILE 130 155 155 ILE ILE A . n A 1 131 LYS 131 156 156 LYS LYS A . n A 1 132 LEU 132 157 157 LEU LEU A . n A 1 133 LYS 133 158 158 LYS LYS A . n A 1 134 GLU 134 159 159 GLU GLU A . n A 1 135 GLY 135 160 160 GLY GLY A . n A 1 136 VAL 136 161 161 VAL VAL A . n A 1 137 GLY 137 162 162 GLY GLY A . n A 1 138 PHE 138 163 163 PHE PHE A . n A 1 139 ASN 139 164 164 ASN ASN A . n A 1 140 GLY 140 165 165 GLY GLY A . n A 1 141 THR 141 166 166 THR THR A . n A 1 142 VAL 142 167 167 VAL VAL A . n A 1 143 ALA 143 168 168 ALA ALA A . n A 1 144 ASP 144 169 169 ASP ASP A . n A 1 145 VAL 145 170 170 VAL VAL A . n A 1 146 VAL 146 171 171 VAL VAL A . n A 1 147 GLU 147 172 172 GLU GLU A . n A 1 148 ASN 148 173 173 ASN ASN A . n A 1 149 PRO 149 174 174 PRO PRO A . n A 1 150 LYS 150 175 175 LYS LYS A . n A 1 151 ASN 151 176 176 ASN ASN A . n A 1 152 ILE 152 177 177 ILE ILE A . n A 1 153 THR 153 178 178 THR THR A . n A 1 154 PHE 154 179 179 PHE PHE A . n A 1 155 GLU 155 180 180 GLU GLU A . n A 1 156 SER 156 181 181 SER SER A . n A 1 157 ILE 157 182 182 ILE ILE A . n A 1 158 ASP 158 183 183 ASP ASP A . n A 1 159 LEU 159 184 184 LEU LEU A . n A 1 160 LEU 160 185 185 LEU LEU A . n A 1 161 ASN 161 186 186 ASN ASN A . n A 1 162 LEU 162 187 187 LEU LEU A . n A 1 163 ALA 163 188 188 ALA ALA A . n A 1 164 LYS 164 189 189 LYS LYS A . n A 1 165 ALA 165 190 190 ALA ALA A . n A 1 166 TYR 166 191 191 TYR TYR A . n A 1 167 ASP 167 192 192 ASP ASP A . n A 1 168 GLU 168 193 193 GLU GLU A . n A 1 169 LYS 169 194 194 LYS LYS A . n A 1 170 ASP 170 195 195 ASP ASP A . n A 1 171 ILE 171 196 196 ILE ILE A . n A 1 172 ALA 172 197 197 ALA ALA A . n A 1 173 MSE 173 198 198 MSE MSE A . n A 1 174 VAL 174 199 199 VAL VAL A . n A 1 175 PHE 175 200 200 PHE PHE A . n A 1 176 CYS 176 201 201 CYS CYS A . n A 1 177 TYR 177 202 202 TYR TYR A . n A 1 178 PRO 178 203 203 PRO PRO A . n A 1 179 ALA 179 204 204 ALA ALA A . n A 1 180 TYR 180 205 205 TYR TYR A . n A 1 181 LEU 181 206 206 LEU LEU A . n A 1 182 GLU 182 207 207 GLU GLU A . n A 1 183 PRO 183 208 208 PRO PRO A . n A 1 184 ALA 184 209 209 ALA ALA A . n A 1 185 GLY 185 210 210 GLY GLY A . n A 1 186 LEU 186 211 211 LEU LEU A . n A 1 187 THR 187 212 212 THR THR A . n A 1 188 THR 188 213 213 THR THR A . n A 1 189 LYS 189 214 214 LYS LYS A . n A 1 190 ASP 190 215 215 ASP ASP A . n A 1 191 ALA 191 216 216 ALA ALA A . n A 1 192 ILE 192 217 217 ILE ILE A . n A 1 193 LEU 193 218 218 LEU LEU A . n A 1 194 LEU 194 219 219 LEU LEU A . n A 1 195 GLU 195 220 220 GLU GLU A . n A 1 196 ASP 196 221 221 ASP ASP A . n A 1 197 LYS 197 222 222 LYS LYS A . n A 1 198 GLU 198 223 223 GLU GLU A . n A 1 199 ALA 199 224 224 ALA ALA A . n A 1 200 SER 200 225 225 SER SER A . n A 1 201 LYS 201 226 226 LYS LYS A . n A 1 202 HIS 202 227 227 HIS HIS A . n A 1 203 TYR 203 228 228 TYR TYR A . n A 1 204 ALA 204 229 229 ALA ALA A . n A 1 205 LEU 205 230 230 LEU LEU A . n A 1 206 GLN 206 231 231 GLN GLN A . n A 1 207 VAL 207 232 232 VAL VAL A . n A 1 208 VAL 208 233 233 VAL VAL A . n A 1 209 THR 209 234 234 THR THR A . n A 1 210 ARG 210 235 235 ARG ARG A . n A 1 211 LYS 211 236 236 LYS LYS A . n A 1 212 GLY 212 237 237 GLY GLY A . n A 1 213 GLU 213 238 238 GLU GLU A . n A 1 214 LYS 214 239 239 LYS LYS A . n A 1 215 ASP 215 240 240 ASP ASP A . n A 1 216 SER 216 241 241 SER SER A . n A 1 217 GLU 217 242 242 GLU GLU A . n A 1 218 LYS 218 243 243 LYS LYS A . n A 1 219 ILE 219 244 244 ILE ILE A . n A 1 220 LYS 220 245 245 LYS LYS A . n A 1 221 VAL 221 246 246 VAL VAL A . n A 1 222 LEU 222 247 247 LEU LEU A . n A 1 223 LYS 223 248 248 LYS LYS A . n A 1 224 GLU 224 249 249 GLU GLU A . n A 1 225 ALA 225 250 250 ALA ALA A . n A 1 226 MSE 226 251 251 MSE MSE A . n A 1 227 THR 227 252 252 THR THR A . n A 1 228 THR 228 253 253 THR THR A . n A 1 229 LYS 229 254 254 LYS LYS A . n A 1 230 GLU 230 255 255 GLU GLU A . n A 1 231 VAL 231 256 256 VAL VAL A . n A 1 232 ALA 232 257 257 ALA ALA A . n A 1 233 GLU 233 258 258 GLU GLU A . n A 1 234 TYR 234 259 259 TYR TYR A . n A 1 235 ILE 235 260 260 ILE ILE A . n A 1 236 LYS 236 261 261 LYS LYS A . n A 1 237 LYS 237 262 262 LYS LYS A . n A 1 238 ASN 238 263 263 ASN ASN A . n A 1 239 SER 239 264 264 SER SER A . n A 1 240 LYS 240 265 265 LYS LYS A . n A 1 241 GLY 241 266 266 GLY GLY A . n A 1 242 ALA 242 267 267 ALA ALA A . n A 1 243 ASN 243 268 268 ASN ASN A . n A 1 244 ILE 244 269 269 ILE ILE A . n A 1 245 PRO 245 270 270 PRO PRO A . n A 1 246 ALA 246 271 271 ALA ALA A . n A 1 247 PHE 247 272 272 PHE PHE A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 301 273 ZN ZN A . C 2 ZN 1 302 274 ZN ZN A . D 2 ZN 1 303 275 ZN ZN A . E 2 ZN 1 304 276 ZN ZN A . F 2 ZN 1 305 277 ZN ZN A . G 3 EDO 1 306 279 EDO EDO A . H 3 EDO 1 307 280 EDO EDO A . I 3 EDO 1 308 281 EDO EDO A . J 4 ACT 1 309 282 ACT ACT A . K 4 ACT 1 310 283 ACT ACT A . L 5 NA 1 311 284 NA NA A . M 6 HOH 1 401 285 HOH HOH A . M 6 HOH 2 402 286 HOH HOH A . M 6 HOH 3 403 287 HOH HOH A . M 6 HOH 4 404 288 HOH HOH A . M 6 HOH 5 405 289 HOH HOH A . M 6 HOH 6 406 290 HOH HOH A . M 6 HOH 7 407 291 HOH HOH A . M 6 HOH 8 408 292 HOH HOH A . M 6 HOH 9 409 293 HOH HOH A . M 6 HOH 10 410 294 HOH HOH A . M 6 HOH 11 411 295 HOH HOH A . M 6 HOH 12 412 296 HOH HOH A . M 6 HOH 13 413 297 HOH HOH A . M 6 HOH 14 414 298 HOH HOH A . M 6 HOH 15 415 299 HOH HOH A . M 6 HOH 16 416 300 HOH HOH A . M 6 HOH 17 417 301 HOH HOH A . M 6 HOH 18 418 302 HOH HOH A . M 6 HOH 19 419 303 HOH HOH A . M 6 HOH 20 420 304 HOH HOH A . M 6 HOH 21 421 305 HOH HOH A . M 6 HOH 22 422 306 HOH HOH A . M 6 HOH 23 423 307 HOH HOH A . M 6 HOH 24 424 308 HOH HOH A . M 6 HOH 25 425 309 HOH HOH A . M 6 HOH 26 426 310 HOH HOH A . M 6 HOH 27 427 311 HOH HOH A . M 6 HOH 28 428 312 HOH HOH A . M 6 HOH 29 429 313 HOH HOH A . M 6 HOH 30 430 314 HOH HOH A . M 6 HOH 31 431 315 HOH HOH A . M 6 HOH 32 432 316 HOH HOH A . M 6 HOH 33 433 317 HOH HOH A . M 6 HOH 34 434 318 HOH HOH A . M 6 HOH 35 435 319 HOH HOH A . M 6 HOH 36 436 320 HOH HOH A . M 6 HOH 37 437 321 HOH HOH A . M 6 HOH 38 438 322 HOH HOH A . M 6 HOH 39 439 323 HOH HOH A . M 6 HOH 40 440 324 HOH HOH A . M 6 HOH 41 441 325 HOH HOH A . M 6 HOH 42 442 326 HOH HOH A . M 6 HOH 43 443 327 HOH HOH A . M 6 HOH 44 444 328 HOH HOH A . M 6 HOH 45 445 329 HOH HOH A . M 6 HOH 46 446 330 HOH HOH A . M 6 HOH 47 447 331 HOH HOH A . M 6 HOH 48 448 332 HOH HOH A . M 6 HOH 49 449 333 HOH HOH A . M 6 HOH 50 450 334 HOH HOH A . M 6 HOH 51 451 335 HOH HOH A . M 6 HOH 52 452 336 HOH HOH A . M 6 HOH 53 453 337 HOH HOH A . M 6 HOH 54 454 338 HOH HOH A . M 6 HOH 55 455 339 HOH HOH A . M 6 HOH 56 456 340 HOH HOH A . M 6 HOH 57 457 341 HOH HOH A . M 6 HOH 58 458 342 HOH HOH A . M 6 HOH 59 459 343 HOH HOH A . M 6 HOH 60 460 344 HOH HOH A . M 6 HOH 61 461 345 HOH HOH A . M 6 HOH 62 462 346 HOH HOH A . M 6 HOH 63 463 347 HOH HOH A . M 6 HOH 64 464 348 HOH HOH A . M 6 HOH 65 465 349 HOH HOH A . M 6 HOH 66 466 350 HOH HOH A . M 6 HOH 67 467 351 HOH HOH A . M 6 HOH 68 468 352 HOH HOH A . M 6 HOH 69 469 353 HOH HOH A . M 6 HOH 70 470 354 HOH HOH A . M 6 HOH 71 471 355 HOH HOH A . M 6 HOH 72 472 356 HOH HOH A . M 6 HOH 73 473 357 HOH HOH A . M 6 HOH 74 474 358 HOH HOH A . M 6 HOH 75 475 359 HOH HOH A . M 6 HOH 76 476 360 HOH HOH A . M 6 HOH 77 477 361 HOH HOH A . M 6 HOH 78 478 362 HOH HOH A . M 6 HOH 79 479 363 HOH HOH A . M 6 HOH 80 480 364 HOH HOH A . M 6 HOH 81 481 365 HOH HOH A . M 6 HOH 82 482 366 HOH HOH A . M 6 HOH 83 483 367 HOH HOH A . M 6 HOH 84 484 368 HOH HOH A . M 6 HOH 85 485 369 HOH HOH A . M 6 HOH 86 486 370 HOH HOH A . M 6 HOH 87 487 371 HOH HOH A . M 6 HOH 88 488 372 HOH HOH A . M 6 HOH 89 489 373 HOH HOH A . M 6 HOH 90 490 374 HOH HOH A . M 6 HOH 91 491 375 HOH HOH A . M 6 HOH 92 492 376 HOH HOH A . M 6 HOH 93 493 377 HOH HOH A . M 6 HOH 94 494 378 HOH HOH A . M 6 HOH 95 495 379 HOH HOH A . M 6 HOH 96 496 380 HOH HOH A . M 6 HOH 97 497 381 HOH HOH A . M 6 HOH 98 498 382 HOH HOH A . M 6 HOH 99 499 383 HOH HOH A . M 6 HOH 100 500 384 HOH HOH A . M 6 HOH 101 501 385 HOH HOH A . M 6 HOH 102 502 386 HOH HOH A . M 6 HOH 103 503 387 HOH HOH A . M 6 HOH 104 504 388 HOH HOH A . M 6 HOH 105 505 389 HOH HOH A . M 6 HOH 106 506 390 HOH HOH A . M 6 HOH 107 507 391 HOH HOH A . M 6 HOH 108 508 392 HOH HOH A . M 6 HOH 109 509 393 HOH HOH A . M 6 HOH 110 510 394 HOH HOH A . M 6 HOH 111 511 395 HOH HOH A . M 6 HOH 112 512 396 HOH HOH A . M 6 HOH 113 513 397 HOH HOH A . M 6 HOH 114 514 398 HOH HOH A . M 6 HOH 115 515 399 HOH HOH A . M 6 HOH 116 516 400 HOH HOH A . M 6 HOH 117 517 401 HOH HOH A . M 6 HOH 118 518 402 HOH HOH A . M 6 HOH 119 519 403 HOH HOH A . M 6 HOH 120 520 404 HOH HOH A . M 6 HOH 121 521 405 HOH HOH A . M 6 HOH 122 522 406 HOH HOH A . M 6 HOH 123 523 407 HOH HOH A . M 6 HOH 124 524 408 HOH HOH A . M 6 HOH 125 525 409 HOH HOH A . M 6 HOH 126 526 410 HOH HOH A . M 6 HOH 127 527 411 HOH HOH A . M 6 HOH 128 528 412 HOH HOH A . M 6 HOH 129 529 413 HOH HOH A . M 6 HOH 130 530 414 HOH HOH A . M 6 HOH 131 531 415 HOH HOH A . M 6 HOH 132 532 416 HOH HOH A . M 6 HOH 133 533 417 HOH HOH A . M 6 HOH 134 534 418 HOH HOH A . M 6 HOH 135 535 419 HOH HOH A . M 6 HOH 136 536 420 HOH HOH A . M 6 HOH 137 537 421 HOH HOH A . M 6 HOH 138 538 422 HOH HOH A . M 6 HOH 139 539 423 HOH HOH A . M 6 HOH 140 540 424 HOH HOH A . M 6 HOH 141 541 425 HOH HOH A . M 6 HOH 142 542 426 HOH HOH A . M 6 HOH 143 543 427 HOH HOH A . M 6 HOH 144 544 428 HOH HOH A . M 6 HOH 145 545 429 HOH HOH A . M 6 HOH 146 546 430 HOH HOH A . M 6 HOH 147 547 431 HOH HOH A . M 6 HOH 148 548 432 HOH HOH A . M 6 HOH 149 549 433 HOH HOH A . M 6 HOH 150 550 434 HOH HOH A . M 6 HOH 151 551 435 HOH HOH A . M 6 HOH 152 552 436 HOH HOH A . M 6 HOH 153 553 437 HOH HOH A . M 6 HOH 154 554 438 HOH HOH A . M 6 HOH 155 555 439 HOH HOH A . M 6 HOH 156 556 440 HOH HOH A . M 6 HOH 157 557 441 HOH HOH A . M 6 HOH 158 558 442 HOH HOH A . M 6 HOH 159 559 443 HOH HOH A . M 6 HOH 160 560 444 HOH HOH A . M 6 HOH 161 561 445 HOH HOH A . M 6 HOH 162 562 446 HOH HOH A . M 6 HOH 163 563 447 HOH HOH A . M 6 HOH 164 564 448 HOH HOH A . M 6 HOH 165 565 449 HOH HOH A . M 6 HOH 166 566 450 HOH HOH A . M 6 HOH 167 567 451 HOH HOH A . M 6 HOH 168 568 452 HOH HOH A . M 6 HOH 169 569 453 HOH HOH A . M 6 HOH 170 570 454 HOH HOH A . M 6 HOH 171 571 455 HOH HOH A . M 6 HOH 172 572 456 HOH HOH A . M 6 HOH 173 573 457 HOH HOH A . M 6 HOH 174 574 458 HOH HOH A . M 6 HOH 175 575 459 HOH HOH A . M 6 HOH 176 576 460 HOH HOH A . M 6 HOH 177 577 461 HOH HOH A . M 6 HOH 178 578 462 HOH HOH A . M 6 HOH 179 579 463 HOH HOH A . M 6 HOH 180 580 464 HOH HOH A . M 6 HOH 181 581 465 HOH HOH A . M 6 HOH 182 582 466 HOH HOH A . M 6 HOH 183 583 467 HOH HOH A . M 6 HOH 184 584 468 HOH HOH A . M 6 HOH 185 585 469 HOH HOH A . M 6 HOH 186 586 470 HOH HOH A . M 6 HOH 187 587 471 HOH HOH A . M 6 HOH 188 588 472 HOH HOH A . M 6 HOH 189 589 473 HOH HOH A . M 6 HOH 190 590 474 HOH HOH A . M 6 HOH 191 591 475 HOH HOH A . M 6 HOH 192 592 476 HOH HOH A . M 6 HOH 193 593 477 HOH HOH A . M 6 HOH 194 594 478 HOH HOH A . M 6 HOH 195 595 479 HOH HOH A . M 6 HOH 196 596 480 HOH HOH A . M 6 HOH 197 597 481 HOH HOH A . M 6 HOH 198 598 482 HOH HOH A . M 6 HOH 199 599 483 HOH HOH A . M 6 HOH 200 600 484 HOH HOH A . M 6 HOH 201 601 485 HOH HOH A . M 6 HOH 202 602 486 HOH HOH A . M 6 HOH 203 603 487 HOH HOH A . M 6 HOH 204 604 488 HOH HOH A . M 6 HOH 205 605 489 HOH HOH A . M 6 HOH 206 606 490 HOH HOH A . M 6 HOH 207 607 491 HOH HOH A . M 6 HOH 208 608 492 HOH HOH A . M 6 HOH 209 609 493 HOH HOH A . M 6 HOH 210 610 494 HOH HOH A . M 6 HOH 211 611 495 HOH HOH A . M 6 HOH 212 612 496 HOH HOH A . M 6 HOH 213 613 497 HOH HOH A . M 6 HOH 214 614 498 HOH HOH A . M 6 HOH 215 615 499 HOH HOH A . M 6 HOH 216 616 500 HOH HOH A . M 6 HOH 217 617 501 HOH HOH A . M 6 HOH 218 618 502 HOH HOH A . M 6 HOH 219 619 503 HOH HOH A . M 6 HOH 220 620 504 HOH HOH A . M 6 HOH 221 621 505 HOH HOH A . M 6 HOH 222 622 506 HOH HOH A . M 6 HOH 223 623 507 HOH HOH A . M 6 HOH 224 624 508 HOH HOH A . M 6 HOH 225 625 509 HOH HOH A . M 6 HOH 226 626 510 HOH HOH A . M 6 HOH 227 627 511 HOH HOH A . M 6 HOH 228 628 512 HOH HOH A . M 6 HOH 229 629 513 HOH HOH A . M 6 HOH 230 630 514 HOH HOH A . M 6 HOH 231 631 515 HOH HOH A . M 6 HOH 232 632 516 HOH HOH A . M 6 HOH 233 633 517 HOH HOH A . M 6 HOH 234 634 518 HOH HOH A . M 6 HOH 235 635 519 HOH HOH A . M 6 HOH 236 636 520 HOH HOH A . M 6 HOH 237 637 521 HOH HOH A . M 6 HOH 238 638 522 HOH HOH A . M 6 HOH 239 639 523 HOH HOH A . M 6 HOH 240 640 524 HOH HOH A . M 6 HOH 241 641 525 HOH HOH A . M 6 HOH 242 642 526 HOH HOH A . M 6 HOH 243 643 527 HOH HOH A . M 6 HOH 244 644 528 HOH HOH A . M 6 HOH 245 645 529 HOH HOH A . M 6 HOH 246 646 530 HOH HOH A . M 6 HOH 247 647 531 HOH HOH A . M 6 HOH 248 648 532 HOH HOH A . M 6 HOH 249 649 533 HOH HOH A . M 6 HOH 250 650 534 HOH HOH A . M 6 HOH 251 651 535 HOH HOH A . M 6 HOH 252 652 536 HOH HOH A . M 6 HOH 253 653 537 HOH HOH A . M 6 HOH 254 654 538 HOH HOH A . M 6 HOH 255 655 539 HOH HOH A . M 6 HOH 256 656 540 HOH HOH A . M 6 HOH 257 657 541 HOH HOH A . M 6 HOH 258 658 542 HOH HOH A . M 6 HOH 259 659 543 HOH HOH A . M 6 HOH 260 660 544 HOH HOH A . M 6 HOH 261 661 545 HOH HOH A . M 6 HOH 262 662 546 HOH HOH A . M 6 HOH 263 663 547 HOH HOH A . M 6 HOH 264 664 548 HOH HOH A . M 6 HOH 265 665 549 HOH HOH A . M 6 HOH 266 666 550 HOH HOH A . M 6 HOH 267 667 551 HOH HOH A . M 6 HOH 268 668 552 HOH HOH A . M 6 HOH 269 669 553 HOH HOH A . M 6 HOH 270 670 554 HOH HOH A . M 6 HOH 271 671 555 HOH HOH A . M 6 HOH 272 672 556 HOH HOH A . M 6 HOH 273 673 557 HOH HOH A . M 6 HOH 274 674 558 HOH HOH A . M 6 HOH 275 675 559 HOH HOH A . M 6 HOH 276 676 560 HOH HOH A . M 6 HOH 277 677 561 HOH HOH A . M 6 HOH 278 678 562 HOH HOH A . M 6 HOH 279 679 563 HOH HOH A . M 6 HOH 280 680 564 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 39 A MSE 64 ? MET SELENOMETHIONINE 2 A MSE 67 A MSE 92 ? MET SELENOMETHIONINE 3 A MSE 69 A MSE 94 ? MET SELENOMETHIONINE 4 A MSE 173 A MSE 198 ? MET SELENOMETHIONINE 5 A MSE 226 A MSE 251 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3800 ? 1 MORE -189 ? 1 'SSA (A^2)' 23480 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 97.1610000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 301 ? B ZN . 2 1 A HOH 571 ? M HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 16 ? A GLU 41 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 20 ? A ASP 45 ? 1_555 108.2 ? 2 OE2 ? A GLU 28 ? A GLU 53 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? M HOH . ? A HOH 680 ? 1_555 88.3 ? 3 OD1 ? A ASP 49 ? A ASP 74 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 ND1 ? A HIS 53 ? A HIS 78 ? 1_555 110.2 ? 4 OD1 ? A ASP 49 ? A ASP 74 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 OE1 ? A GLU 55 ? A GLU 80 ? 1_555 99.9 ? 5 ND1 ? A HIS 53 ? A HIS 78 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 OE1 ? A GLU 55 ? A GLU 80 ? 1_555 118.0 ? 6 OE2 ? A GLU 168 ? A GLU 193 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 OD2 ? A ASP 170 ? A ASP 195 ? 1_555 115.5 ? 7 OE2 ? A GLU 168 ? A GLU 193 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 OD1 ? A ASP 170 ? A ASP 195 ? 1_555 71.3 ? 8 OD2 ? A ASP 170 ? A ASP 195 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 OD1 ? A ASP 170 ? A ASP 195 ? 1_555 45.1 ? 9 OE2 ? A GLU 168 ? A GLU 193 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 615 ? 1_555 75.9 ? 10 OD2 ? A ASP 170 ? A ASP 195 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 615 ? 1_555 67.0 ? 11 OD1 ? A ASP 170 ? A ASP 195 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 615 ? 1_555 62.1 ? 12 OE2 ? A GLU 168 ? A GLU 193 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 676 ? 1_555 142.6 ? 13 OD2 ? A ASP 170 ? A ASP 195 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 676 ? 1_555 82.2 ? 14 OD1 ? A ASP 170 ? A ASP 195 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 676 ? 1_555 112.4 ? 15 O ? M HOH . ? A HOH 615 ? 1_555 NA ? L NA . ? A NA 311 ? 1_555 O ? M HOH . ? A HOH 676 ? 1_555 140.3 ? 16 ND1 ? A HIS 202 ? A HIS 227 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 O ? K ACT . ? A ACT 310 ? 1_555 95.0 ? 17 ND1 ? A HIS 202 ? A HIS 227 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 OXT ? K ACT . ? A ACT 310 ? 1_555 142.9 ? 18 O ? K ACT . ? A ACT 310 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 OXT ? K ACT . ? A ACT 310 ? 1_555 52.2 ? 19 ND1 ? A HIS 202 ? A HIS 227 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 O ? M HOH . ? A HOH 672 ? 1_555 111.9 ? 20 O ? K ACT . ? A ACT 310 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 O ? M HOH . ? A HOH 672 ? 1_555 116.3 ? 21 OXT ? K ACT . ? A ACT 310 ? 1_555 ZN ? E ZN . ? A ZN 304 ? 1_555 O ? M HOH . ? A HOH 672 ? 1_555 75.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-11 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_citation_author.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 4 'Structure model' '_struct_ref_seq_dif.details' 38 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 5.2479 _pdbx_refine_tls.origin_y 34.2901 _pdbx_refine_tls.origin_z 19.3299 _pdbx_refine_tls.T[1][1] 0.0277 _pdbx_refine_tls.T[2][2] 0.0350 _pdbx_refine_tls.T[3][3] 0.0202 _pdbx_refine_tls.T[1][2] 0.0152 _pdbx_refine_tls.T[1][3] 0.0004 _pdbx_refine_tls.T[2][3] -0.0005 _pdbx_refine_tls.L[1][1] 0.6520 _pdbx_refine_tls.L[2][2] 0.3060 _pdbx_refine_tls.L[3][3] 0.2433 _pdbx_refine_tls.L[1][2] -0.0582 _pdbx_refine_tls.L[1][3] 0.0908 _pdbx_refine_tls.L[2][3] 0.0436 _pdbx_refine_tls.S[1][1] -0.0374 _pdbx_refine_tls.S[2][2] 0.0883 _pdbx_refine_tls.S[3][3] -0.0509 _pdbx_refine_tls.S[1][2] 0.0119 _pdbx_refine_tls.S[1][3] -0.0088 _pdbx_refine_tls.S[2][3] -0.0215 _pdbx_refine_tls.S[2][1] 0.0554 _pdbx_refine_tls.S[3][1] 0.0322 _pdbx_refine_tls.S[3][2] -0.0117 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 31 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 272 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.sequence_details ;THIS CONSTRUCT (RESIDUES 27-272) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE ; _pdbx_entry_details.entry_id 4NTL _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 74 ? ? CG A ASP 74 ? ? OD1 A ASP 74 ? ? 123.76 118.30 5.46 0.90 N 2 1 CB A ASP 126 ? ? CG A ASP 126 ? ? OD1 A ASP 126 ? ? 125.49 118.30 7.19 0.90 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 86 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -160.40 _pdbx_validate_torsion.psi -10.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 194 ? CG ? A LYS 169 CG 2 1 Y 1 A LYS 194 ? CD ? A LYS 169 CD 3 1 Y 1 A LYS 194 ? CE ? A LYS 169 CE 4 1 Y 1 A LYS 194 ? NZ ? A LYS 169 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ASP 27 ? A ASP 2 3 1 Y 1 A GLN 28 ? A GLN 3 4 1 Y 1 A LYS 29 ? A LYS 4 5 1 Y 1 A GLU 30 ? A GLU 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 1,2-ETHANEDIOL EDO 4 'ACETATE ION' ACT 5 'SODIUM ION' NA 6 water HOH #