HEADER LYASE 08-DEC-13 4NX5 TITLE CRYSTAL STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM TITLE 2 METHANOBACTERIUM THERMOAUTOTROPHICUM COMPLEXED WITH 6-AZAURIDINE 5'- TITLE 3 MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: R101P; COMPND 5 SYNONYM: OMP DECARBOXYLASE, OMPDCASE, OMPDECASE; COMPND 6 EC: 4.1.1.23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS; SOURCE 3 ORGANISM_TAXID: 145262; SOURCE 4 GENE: PYRF, MTH_129; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TIM BARREL, OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE, 6-AZAURIDINE KEYWDS 2 5'-MONOPHOSPHATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,K.K.CHAN,J.A.GERLT,S.C.ALMO REVDAT 2 20-SEP-23 4NX5 1 REMARK SEQADV LINK REVDAT 1 25-DEC-13 4NX5 0 JRNL AUTH A.A.FEDOROV,E.V.FEDOROV,K.K.CHAN,J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE JRNL TITL 2 DECARBOXYLASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM JRNL TITL 3 COMPLEXED WITH 6-AZAURIDINE 5'-MONOPHOSPHATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 56307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4132 - 3.6416 0.99 4632 141 0.1431 0.1543 REMARK 3 2 3.6416 - 2.8910 1.00 4569 163 0.1500 0.1643 REMARK 3 3 2.8910 - 2.5257 1.00 4556 149 0.1634 0.1873 REMARK 3 4 2.5257 - 2.2949 1.00 4512 167 0.1539 0.1902 REMARK 3 5 2.2949 - 2.1304 1.00 4528 175 0.1448 0.1508 REMARK 3 6 2.1304 - 2.0048 1.00 4559 134 0.1439 0.1443 REMARK 3 7 2.0048 - 1.9044 1.00 4526 161 0.1438 0.1693 REMARK 3 8 1.9044 - 1.8216 1.00 4577 119 0.1432 0.1798 REMARK 3 9 1.8216 - 1.7514 1.00 4494 137 0.1426 0.1929 REMARK 3 10 1.7514 - 1.6910 1.00 4581 127 0.1414 0.1596 REMARK 3 11 1.6910 - 1.6381 1.00 4552 132 0.1424 0.1884 REMARK 3 12 1.6381 - 1.5913 0.99 4481 135 0.1438 0.1778 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3577 REMARK 3 ANGLE : 1.090 4846 REMARK 3 CHIRALITY : 0.075 544 REMARK 3 PLANARITY : 0.006 644 REMARK 3 DIHEDRAL : 11.762 1355 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 53.0866 6.4357 66.3608 REMARK 3 T TENSOR REMARK 3 T11: 0.0764 T22: 0.0443 REMARK 3 T33: 0.0610 T12: -0.0039 REMARK 3 T13: 0.0134 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.2900 L22: 0.6918 REMARK 3 L33: 0.6282 L12: -0.0031 REMARK 3 L13: 0.1639 L23: -0.1624 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.0542 S13: 0.0700 REMARK 3 S21: -0.0266 S22: -0.0063 S23: -0.0576 REMARK 3 S31: -0.0504 S32: 0.0892 S33: 0.0208 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 33.7473 -7.7319 78.1271 REMARK 3 T TENSOR REMARK 3 T11: 0.0738 T22: 0.0511 REMARK 3 T33: 0.0623 T12: -0.0042 REMARK 3 T13: 0.0077 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.3566 L22: 0.6704 REMARK 3 L33: 0.9933 L12: 0.2941 REMARK 3 L13: 0.0984 L23: -0.0318 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.1834 S13: -0.0798 REMARK 3 S21: 0.0538 S22: -0.0434 S23: -0.0040 REMARK 3 S31: 0.0550 S32: -0.0647 S33: 0.0062 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NX5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083766. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56307 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.591 REMARK 200 RESOLUTION RANGE LOW (A) : 32.406 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3G18 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1M TRIS, 0.2M REMARK 280 MAGNESIUM CHLORIDE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.07400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 SER A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 VAL A 6 REMARK 465 ASN A 227 REMARK 465 PRO A 228 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 SER B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 VAL B 6 REMARK 465 ASP B 7 REMARK 465 ASN B 227 REMARK 465 PRO B 228 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 72 54.02 37.89 REMARK 500 ALA A 74 46.19 -151.48 REMARK 500 THR A 124 -82.60 -94.54 REMARK 500 PHE A 134 -39.98 -131.29 REMARK 500 PHE A 134 -39.98 -132.57 REMARK 500 ASN B 13 16.59 59.51 REMARK 500 ASP B 39 13.80 -140.37 REMARK 500 ALA B 74 42.79 -150.73 REMARK 500 PHE B 134 -39.54 -133.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 307 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 221 O REMARK 620 2 HOH B 467 O 92.0 REMARK 620 3 HOH B 477 O 90.5 90.4 REMARK 620 4 HOH B 518 O 94.6 91.4 174.6 REMARK 620 5 HOH B 626 O 176.3 88.1 85.9 89.1 REMARK 620 6 HOH B 627 O 86.0 172.7 96.6 81.8 94.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 523 O REMARK 620 2 HOH B 596 O 93.9 REMARK 620 3 HOH B 623 O 91.3 91.7 REMARK 620 4 HOH B 624 O 163.5 100.4 96.5 REMARK 620 5 HOH B 625 O 85.5 177.6 86.0 80.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UP6 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UP6 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G18 RELATED DB: PDB REMARK 900 THE SAME PROTEIN UNCOMPLEXED DBREF 4NX5 A 1 228 UNP O26232 PYRF_METTH 1 228 DBREF 4NX5 B 1 228 UNP O26232 PYRF_METTH 1 228 SEQADV 4NX5 PRO A 101 UNP O26232 ARG 101 ENGINEERED MUTATION SEQADV 4NX5 PRO B 101 UNP O26232 ARG 101 ENGINEERED MUTATION SEQRES 1 A 228 MET ARG SER ARG ARG VAL ASP VAL MET ASP VAL MET ASN SEQRES 2 A 228 ARG LEU ILE LEU ALA MET ASP LEU MET ASN ARG ASP ASP SEQRES 3 A 228 ALA LEU ARG VAL THR GLY GLU VAL ARG GLU TYR ILE ASP SEQRES 4 A 228 THR VAL LYS ILE GLY TYR PRO LEU VAL LEU SER GLU GLY SEQRES 5 A 228 MET ASP ILE ILE ALA GLU PHE ARG LYS ARG PHE GLY CYS SEQRES 6 A 228 ARG ILE ILE ALA ASP PHE LYS VAL ALA ASP ILE PRO GLU SEQRES 7 A 228 THR ASN GLU LYS ILE CYS ARG ALA THR PHE LYS ALA GLY SEQRES 8 A 228 ALA ASP ALA ILE ILE VAL HIS GLY PHE PRO GLY ALA ASP SEQRES 9 A 228 SER VAL ARG ALA CYS LEU ASN VAL ALA GLU GLU MET GLY SEQRES 10 A 228 ARG GLU VAL PHE LEU LEU THR GLU MET SER HIS PRO GLY SEQRES 11 A 228 ALA GLU MET PHE ILE GLN GLY ALA ALA ASP GLU ILE ALA SEQRES 12 A 228 ARG MET GLY VAL ASP LEU GLY VAL LYS ASN TYR VAL GLY SEQRES 13 A 228 PRO SER THR ARG PRO GLU ARG LEU SER ARG LEU ARG GLU SEQRES 14 A 228 ILE ILE GLY GLN ASP SER PHE LEU ILE SER PRO GLY VAL SEQRES 15 A 228 GLY ALA GLN GLY GLY ASP PRO GLY GLU THR LEU ARG PHE SEQRES 16 A 228 ALA ASP ALA ILE ILE VAL GLY ARG SER ILE TYR LEU ALA SEQRES 17 A 228 ASP ASN PRO ALA ALA ALA ALA ALA GLY ILE ILE GLU SER SEQRES 18 A 228 ILE LYS ASP LEU LEU ASN PRO SEQRES 1 B 228 MET ARG SER ARG ARG VAL ASP VAL MET ASP VAL MET ASN SEQRES 2 B 228 ARG LEU ILE LEU ALA MET ASP LEU MET ASN ARG ASP ASP SEQRES 3 B 228 ALA LEU ARG VAL THR GLY GLU VAL ARG GLU TYR ILE ASP SEQRES 4 B 228 THR VAL LYS ILE GLY TYR PRO LEU VAL LEU SER GLU GLY SEQRES 5 B 228 MET ASP ILE ILE ALA GLU PHE ARG LYS ARG PHE GLY CYS SEQRES 6 B 228 ARG ILE ILE ALA ASP PHE LYS VAL ALA ASP ILE PRO GLU SEQRES 7 B 228 THR ASN GLU LYS ILE CYS ARG ALA THR PHE LYS ALA GLY SEQRES 8 B 228 ALA ASP ALA ILE ILE VAL HIS GLY PHE PRO GLY ALA ASP SEQRES 9 B 228 SER VAL ARG ALA CYS LEU ASN VAL ALA GLU GLU MET GLY SEQRES 10 B 228 ARG GLU VAL PHE LEU LEU THR GLU MET SER HIS PRO GLY SEQRES 11 B 228 ALA GLU MET PHE ILE GLN GLY ALA ALA ASP GLU ILE ALA SEQRES 12 B 228 ARG MET GLY VAL ASP LEU GLY VAL LYS ASN TYR VAL GLY SEQRES 13 B 228 PRO SER THR ARG PRO GLU ARG LEU SER ARG LEU ARG GLU SEQRES 14 B 228 ILE ILE GLY GLN ASP SER PHE LEU ILE SER PRO GLY VAL SEQRES 15 B 228 GLY ALA GLN GLY GLY ASP PRO GLY GLU THR LEU ARG PHE SEQRES 16 B 228 ALA ASP ALA ILE ILE VAL GLY ARG SER ILE TYR LEU ALA SEQRES 17 B 228 ASP ASN PRO ALA ALA ALA ALA ALA GLY ILE ILE GLU SER SEQRES 18 B 228 ILE LYS ASP LEU LEU ASN PRO HET UP6 A 301 21 HET CL A 302 1 HET CL A 303 1 HET EDO A 304 4 HET UP6 B 301 21 HET CL B 302 1 HET CL B 303 1 HET GOL B 304 6 HET GOL B 305 6 HET MG B 306 1 HET MG B 307 1 HETNAM UP6 6-AZA URIDINE 5'-MONOPHOSPHATE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN UP6 6-AZA-UMP HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 UP6 2(C8 H12 N3 O9 P) FORMUL 4 CL 4(CL 1-) FORMUL 6 EDO C2 H6 O2 FORMUL 10 GOL 2(C3 H8 O3) FORMUL 12 MG 2(MG 2+) FORMUL 14 HOH *423(H2 O) HELIX 1 1 VAL A 11 ASN A 13 5 3 HELIX 2 2 ASN A 23 VAL A 34 1 12 HELIX 3 3 TYR A 45 GLY A 52 1 8 HELIX 4 4 MET A 53 PHE A 63 1 11 HELIX 5 5 ILE A 76 ALA A 90 1 15 HELIX 6 6 GLY A 102 GLY A 117 1 16 HELIX 7 7 HIS A 128 MET A 133 5 6 HELIX 8 8 PHE A 134 GLY A 150 1 17 HELIX 9 9 ARG A 160 GLY A 172 1 13 HELIX 10 10 ASP A 188 LEU A 193 1 6 HELIX 11 11 GLY A 202 LEU A 207 1 6 HELIX 12 12 ASN A 210 ILE A 222 1 13 HELIX 13 13 LYS A 223 LEU A 226 5 4 HELIX 14 14 VAL B 11 ASN B 13 5 3 HELIX 15 15 ASN B 23 ARG B 35 1 13 HELIX 16 16 GLU B 36 ILE B 38 5 3 HELIX 17 17 TYR B 45 GLY B 52 1 8 HELIX 18 18 MET B 53 GLY B 64 1 12 HELIX 19 19 ILE B 76 ALA B 90 1 15 HELIX 20 20 GLY B 102 GLY B 117 1 16 HELIX 21 21 HIS B 128 MET B 133 5 6 HELIX 22 22 PHE B 134 GLY B 150 1 17 HELIX 23 23 ARG B 160 GLY B 172 1 13 HELIX 24 24 ASP B 188 LEU B 193 1 6 HELIX 25 25 GLY B 202 LEU B 207 1 6 HELIX 26 26 ASN B 210 ILE B 222 1 13 HELIX 27 27 LYS B 223 LEU B 226 5 4 SHEET 1 A 9 LEU A 15 MET A 19 0 SHEET 2 A 9 THR A 40 GLY A 44 1 O LYS A 42 N LEU A 17 SHEET 3 A 9 ARG A 66 VAL A 73 1 O ARG A 66 N VAL A 41 SHEET 4 A 9 ALA A 94 HIS A 98 1 O ALA A 94 N ALA A 69 SHEET 5 A 9 GLU A 119 LEU A 123 1 O LEU A 123 N VAL A 97 SHEET 6 A 9 ASN A 153 VAL A 155 1 O ASN A 153 N LEU A 122 SHEET 7 A 9 PHE A 176 SER A 179 1 O PHE A 176 N TYR A 154 SHEET 8 A 9 ALA A 198 VAL A 201 1 O ILE A 200 N SER A 179 SHEET 9 A 9 LEU A 15 MET A 19 1 N ILE A 16 O ILE A 199 SHEET 1 B 9 LEU B 15 MET B 19 0 SHEET 2 B 9 THR B 40 GLY B 44 1 O LYS B 42 N LEU B 17 SHEET 3 B 9 ARG B 66 VAL B 73 1 O ARG B 66 N VAL B 41 SHEET 4 B 9 ALA B 94 HIS B 98 1 O ALA B 94 N ALA B 69 SHEET 5 B 9 GLU B 119 LEU B 123 1 O LEU B 123 N VAL B 97 SHEET 6 B 9 ASN B 153 VAL B 155 1 O ASN B 153 N LEU B 122 SHEET 7 B 9 PHE B 176 SER B 179 1 O PHE B 176 N TYR B 154 SHEET 8 B 9 ALA B 198 VAL B 201 1 O ILE B 200 N SER B 179 SHEET 9 B 9 LEU B 15 MET B 19 1 N ILE B 16 O ILE B 199 LINK O SER B 221 MG MG B 307 1555 1555 2.02 LINK MG MG B 306 O HOH B 523 1555 1555 2.07 LINK MG MG B 306 O HOH B 596 1555 1555 2.13 LINK MG MG B 306 O HOH B 623 1555 1555 1.95 LINK MG MG B 306 O HOH B 624 1555 1555 1.94 LINK MG MG B 306 O HOH B 625 1555 1555 2.24 LINK MG MG B 307 O HOH B 467 1555 1555 1.98 LINK MG MG B 307 O HOH B 477 1555 1555 2.12 LINK MG MG B 307 O HOH B 518 1555 1555 2.12 LINK MG MG B 307 O HOH B 626 1555 1555 2.12 LINK MG MG B 307 O HOH B 627 1555 1555 2.17 SITE 1 AC1 19 ASP A 20 LYS A 42 ASP A 70 LYS A 72 SITE 2 AC1 19 MET A 126 SER A 127 PRO A 180 GLN A 185 SITE 3 AC1 19 GLY A 202 ARG A 203 HOH A 405 HOH A 410 SITE 4 AC1 19 HOH A 413 HOH A 416 HOH A 419 HOH A 420 SITE 5 AC1 19 ASP B 75 ILE B 76 THR B 79 SITE 1 AC2 3 ASP A 104 ARG A 107 GLY B 130 SITE 1 AC3 4 PRO A 77 GLU A 78 HOH B 482 HOH B 571 SITE 1 AC4 6 ASP A 140 ARG A 144 ARG A 166 ILE A 170 SITE 2 AC4 6 HOH A 558 HOH A 591 SITE 1 AC5 19 ASP A 75 ILE A 76 THR A 79 ASP B 20 SITE 2 AC5 19 LYS B 42 ASP B 70 LYS B 72 MET B 126 SITE 3 AC5 19 SER B 127 PRO B 180 GLN B 185 GLY B 202 SITE 4 AC5 19 ARG B 203 HOH B 407 HOH B 410 HOH B 411 SITE 5 AC5 19 HOH B 413 HOH B 419 HOH B 426 SITE 1 AC6 3 GLY A 130 ASP B 104 GOL B 305 SITE 1 AC7 3 HOH A 486 PRO B 77 GLU B 78 SITE 1 AC8 8 GLU A 33 ASN A 210 ALA A 212 HOH A 427 SITE 2 AC8 8 HOH A 430 HOH A 483 THR B 159 PRO B 161 SITE 1 AC9 4 ASP B 104 ARG B 107 LEU B 149 CL B 302 SITE 1 BC1 5 HOH B 523 HOH B 596 HOH B 623 HOH B 624 SITE 2 BC1 5 HOH B 625 SITE 1 BC2 6 SER B 221 HOH B 467 HOH B 477 HOH B 518 SITE 2 BC2 6 HOH B 626 HOH B 627 CRYST1 59.737 64.148 61.527 90.00 115.36 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016740 0.000000 0.007936 0.00000 SCALE2 0.000000 0.015589 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017987 0.00000