data_4NXR # _entry.id 4NXR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NXR pdb_00004nxr 10.2210/pdb4nxr/pdb RCSB RCSB083788 ? ? WWPDB D_1000083788 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KZD 'The T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Wild type in apo state' unspecified PDB 3KZE 'The T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Wild type in model peptide-bound state' unspecified PDB 4GVD 'The T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Wild type in SDC1-bound state' unspecified PDB 4GVC 'The T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Wild type in pSDC1-bound state' unspecified PDB 4NXQ . unspecified PDB 4NXP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NXR _pdbx_database_status.recvd_initial_deposition_date 2013-12-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, X.' 1 'Speckhard, D.C.' 2 'Shepherd, T.R.' 3 'Hengel, S.R.' 4 'Fuentes, E.J.' 5 # _citation.id primary _citation.title 'Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions.' _citation.journal_abbrev Structure _citation.journal_volume 24 _citation.page_first 2053 _citation.page_last 2066 _citation.year 2016 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27998539 _citation.pdbx_database_id_DOI 10.1016/j.str.2016.08.019 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, X.' 1 ? primary 'Speckhard, D.C.' 2 ? primary 'Shepherd, T.R.' 3 ? primary 'Sun, Y.J.' 4 ? primary 'Hengel, S.R.' 5 ? primary 'Yu, L.' 6 ? primary 'Fowler, C.A.' 7 ? primary 'Gakhar, L.' 8 ? primary 'Fuentes, E.J.' 9 ? # _cell.entry_id 4NXR _cell.length_a 26.358 _cell.length_b 50.323 _cell.length_c 61.942 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NXR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-lymphoma invasion and metastasis-inducing protein 1' 10192.402 1 ? 'L911M, K912E, L915F, L920V' 'PDZ domain' ? 2 polymer syn 'Neurexin-2-beta Peptide' 1060.158 1 ? ? 'UNP residue 659-666' ? 3 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 4 non-polymer syn '5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)' 251.302 1 ? ? ? ? 5 water nat water 18.015 99 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 TIAM-1 2 'Neurexin II-beta Peptide' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMMEDFFS QPSVGLLVRTYPEL ; ;GAMGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMMEDFFS QPSVGLLVRTYPEL ; A ? 2 'polypeptide(L)' no no NKDKEYYV NKDKEYYV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 LYS n 1 6 VAL n 1 7 THR n 1 8 HIS n 1 9 SER n 1 10 ILE n 1 11 HIS n 1 12 ILE n 1 13 GLU n 1 14 LYS n 1 15 SER n 1 16 ASP n 1 17 THR n 1 18 ALA n 1 19 ALA n 1 20 ASP n 1 21 THR n 1 22 TYR n 1 23 GLY n 1 24 PHE n 1 25 SER n 1 26 LEU n 1 27 SER n 1 28 SER n 1 29 VAL n 1 30 GLU n 1 31 GLU n 1 32 ASP n 1 33 GLY n 1 34 ILE n 1 35 ARG n 1 36 ARG n 1 37 LEU n 1 38 TYR n 1 39 VAL n 1 40 ASN n 1 41 SER n 1 42 VAL n 1 43 LYS n 1 44 GLU n 1 45 THR n 1 46 GLY n 1 47 LEU n 1 48 ALA n 1 49 SER n 1 50 LYS n 1 51 LYS n 1 52 GLY n 1 53 LEU n 1 54 LYS n 1 55 ALA n 1 56 GLY n 1 57 ASP n 1 58 GLU n 1 59 ILE n 1 60 LEU n 1 61 GLU n 1 62 ILE n 1 63 ASN n 1 64 ASN n 1 65 ARG n 1 66 ALA n 1 67 ALA n 1 68 ASP n 1 69 ALA n 1 70 LEU n 1 71 ASN n 1 72 SER n 1 73 SER n 1 74 MET n 1 75 MET n 1 76 GLU n 1 77 ASP n 1 78 PHE n 1 79 PHE n 1 80 SER n 1 81 GLN n 1 82 PRO n 1 83 SER n 1 84 VAL n 1 85 GLY n 1 86 LEU n 1 87 LEU n 1 88 VAL n 1 89 ARG n 1 90 THR n 1 91 TYR n 1 92 PRO n 1 93 GLU n 1 94 LEU n 2 1 ASN n 2 2 LYS n 2 3 ASP n 2 4 LYS n 2 5 GLU n 2 6 TYR n 2 7 TYR n 2 8 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TIAM1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain human _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET21A-6HIS-rTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TIAM1_HUMAN Q13009 1 ;KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQPSL GLLVRTYPEL ; 841 ? 2 UNP NRX2B_HUMAN P58401 2 NKDKEYYV 659 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NXR A 5 ? 94 ? Q13009 841 ? 930 ? 841 930 2 2 4NXR B 1 ? 8 ? P58401 659 ? 666 ? 1 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NXR GLY A 1 ? UNP Q13009 ? ? 'expression tag' 837 1 1 4NXR ALA A 2 ? UNP Q13009 ? ? 'expression tag' 838 2 1 4NXR MET A 3 ? UNP Q13009 ? ? 'expression tag' 839 3 1 4NXR GLY A 4 ? UNP Q13009 ? ? 'expression tag' 840 4 1 4NXR HIS A 8 ? UNP Q13009 GLN 844 variant 844 5 1 4NXR MET A 75 ? UNP Q13009 LEU 911 'engineered mutation' 911 6 1 4NXR GLU A 76 ? UNP Q13009 LYS 912 'engineered mutation' 912 7 1 4NXR PHE A 79 ? UNP Q13009 LEU 915 'engineered mutation' 915 8 1 4NXR VAL A 84 ? UNP Q13009 LEU 920 'engineered mutation' 920 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANS non-polymer . '5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)' 'DANSYL ACID' 'C12 H13 N O3 S' 251.302 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NXR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M Sodium acetate, 0.1M HEPES, pH=7.5, 22% PEG 4000, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type NOIR-1 _diffrn_detector.pdbx_collection_date 2012-12-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4NXR _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 39.06 _reflns.d_resolution_high 1.90 _reflns.number_obs 6821 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.03300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 39.700 _reflns.B_iso_Wilson_estimate 11.4 _reflns.pdbx_redundancy 6.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 87.1 _reflns_shell.Rmerge_I_obs 0.03500 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 11.000 _reflns_shell.pdbx_redundancy 4.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4NXR _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6821 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.64 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.06 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 98.65 _refine.ls_R_factor_obs 0.1489 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1466 _refine.ls_R_factor_R_free 0.1950 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.56 _refine.ls_number_reflns_R_free 311 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 3KZD' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.15 _refine.pdbx_overall_phase_error 18.87 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 789 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 919 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 39.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 832 'X-RAY DIFFRACTION' ? f_angle_d 1.157 ? ? 1118 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.309 ? ? 312 'X-RAY DIFFRACTION' ? f_chiral_restr 0.045 ? ? 120 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 142 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.9000 2.0912 2881 0.1537 96.00 0.2334 . . 124 . . . . 'X-RAY DIFFRACTION' . 2.0912 2.3938 2998 0.1532 100.00 0.2427 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.3938 3.0157 2953 0.1630 100.00 0.2248 . . 140 . . . . 'X-RAY DIFFRACTION' . 3.0157 39.0661 2981 0.1320 100.00 0.1459 . . 150 . . . . # _struct.entry_id 4NXR _struct.title 'Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Quadruple Mutant (QM) in Complex With Neurexin-1 Peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NXR _struct_keywords.pdbx_keywords 'signaling Protein/Peptide' _struct_keywords.text ;Beta barrel fold protein, PDZ domain, peptide binding, specificity mutant, scaffold signaling protein for cell adhesion and cell junction, signaling domain, signaling Protein-Peptide complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 15 ? THR A 17 ? SER A 851 THR A 853 5 ? 3 HELX_P HELX_P2 2 GLY A 46 ? LYS A 51 ? GLY A 882 LYS A 887 1 ? 6 HELX_P HELX_P3 3 ASP A 68 ? LEU A 70 ? ASP A 904 LEU A 906 5 ? 3 HELX_P HELX_P4 4 ASN A 71 ? GLN A 81 ? ASN A 907 GLN A 917 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 6 ? GLU A 13 ? VAL A 842 GLU A 849 A 2 SER A 83 ? THR A 90 ? SER A 919 THR A 926 A 3 GLU A 58 ? ILE A 62 ? GLU A 894 ILE A 898 A 4 ARG A 65 ? ALA A 66 ? ARG A 901 ALA A 902 B 1 ILE A 34 ? ASN A 40 ? ILE A 870 ASN A 876 B 2 SER A 25 ? GLU A 31 ? SER A 861 GLU A 867 B 3 LYS B 2 ? TYR B 7 ? LYS B 2 TYR B 7 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 6 ? N VAL A 842 O THR A 90 ? O THR A 926 A 2 3 O ARG A 89 ? O ARG A 925 N GLU A 58 ? N GLU A 894 A 3 4 N ILE A 62 ? N ILE A 898 O ARG A 65 ? O ARG A 901 B 1 2 O ASN A 40 ? O ASN A 876 N SER A 25 ? N SER A 861 B 2 3 N SER A 28 ? N SER A 864 O LYS B 4 ? O LYS B 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EPE 1001 ? 12 'BINDING SITE FOR RESIDUE EPE A 1001' AC2 Software B ANS 100 ? 6 'BINDING SITE FOR RESIDUE ANS B 100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 ALA A 2 ? ALA A 838 . ? 1_555 ? 2 AC1 12 ASP A 32 ? ASP A 868 . ? 4_544 ? 3 AC1 12 GLY A 33 ? GLY A 869 . ? 4_544 ? 4 AC1 12 LYS A 43 ? LYS A 879 . ? 3_644 ? 5 AC1 12 GLU A 61 ? GLU A 897 . ? 1_655 ? 6 AC1 12 ASN A 64 ? ASN A 900 . ? 1_655 ? 7 AC1 12 TYR A 91 ? TYR A 927 . ? 1_555 ? 8 AC1 12 HOH E . ? HOH A 1146 . ? 4_544 ? 9 AC1 12 HOH E . ? HOH A 1161 . ? 1_655 ? 10 AC1 12 HOH E . ? HOH A 1181 . ? 3_644 ? 11 AC1 12 TYR B 7 ? TYR B 7 . ? 3_644 ? 12 AC1 12 HOH F . ? HOH B 203 . ? 3_644 ? 13 AC2 6 ARG A 65 ? ARG A 901 . ? 1_655 ? 14 AC2 6 ASN A 71 ? ASN A 907 . ? 1_655 ? 15 AC2 6 SER A 73 ? SER A 909 . ? 1_655 ? 16 AC2 6 ASP A 77 ? ASP A 913 . ? 1_655 ? 17 AC2 6 PHE A 78 ? PHE A 914 . ? 1_655 ? 18 AC2 6 ASN B 1 ? ASN B 1 . ? 1_555 ? # _database_PDB_matrix.entry_id 4NXR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NXR _atom_sites.fract_transf_matrix[1][1] 0.037939 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019872 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016144 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 837 837 GLY GLY A . n A 1 2 ALA 2 838 838 ALA ALA A . n A 1 3 MET 3 839 839 MET MET A . n A 1 4 GLY 4 840 840 GLY GLY A . n A 1 5 LYS 5 841 841 LYS LYS A . n A 1 6 VAL 6 842 842 VAL VAL A . n A 1 7 THR 7 843 843 THR THR A . n A 1 8 HIS 8 844 844 HIS HIS A . n A 1 9 SER 9 845 845 SER SER A . n A 1 10 ILE 10 846 846 ILE ILE A . n A 1 11 HIS 11 847 847 HIS HIS A . n A 1 12 ILE 12 848 848 ILE ILE A . n A 1 13 GLU 13 849 849 GLU GLU A . n A 1 14 LYS 14 850 850 LYS LYS A . n A 1 15 SER 15 851 851 SER SER A . n A 1 16 ASP 16 852 852 ASP ASP A . n A 1 17 THR 17 853 853 THR THR A . n A 1 18 ALA 18 854 854 ALA ALA A . n A 1 19 ALA 19 855 855 ALA ALA A . n A 1 20 ASP 20 856 856 ASP ASP A . n A 1 21 THR 21 857 857 THR THR A . n A 1 22 TYR 22 858 858 TYR TYR A . n A 1 23 GLY 23 859 859 GLY GLY A . n A 1 24 PHE 24 860 860 PHE PHE A . n A 1 25 SER 25 861 861 SER SER A . n A 1 26 LEU 26 862 862 LEU LEU A . n A 1 27 SER 27 863 863 SER SER A . n A 1 28 SER 28 864 864 SER SER A . n A 1 29 VAL 29 865 865 VAL VAL A . n A 1 30 GLU 30 866 866 GLU GLU A . n A 1 31 GLU 31 867 867 GLU GLU A . n A 1 32 ASP 32 868 868 ASP ASP A . n A 1 33 GLY 33 869 869 GLY GLY A . n A 1 34 ILE 34 870 870 ILE ILE A . n A 1 35 ARG 35 871 871 ARG ARG A . n A 1 36 ARG 36 872 872 ARG ARG A . n A 1 37 LEU 37 873 873 LEU LEU A . n A 1 38 TYR 38 874 874 TYR TYR A . n A 1 39 VAL 39 875 875 VAL VAL A . n A 1 40 ASN 40 876 876 ASN ASN A . n A 1 41 SER 41 877 877 SER SER A . n A 1 42 VAL 42 878 878 VAL VAL A . n A 1 43 LYS 43 879 879 LYS LYS A . n A 1 44 GLU 44 880 880 GLU GLU A . n A 1 45 THR 45 881 881 THR THR A . n A 1 46 GLY 46 882 882 GLY GLY A . n A 1 47 LEU 47 883 883 LEU LEU A . n A 1 48 ALA 48 884 884 ALA ALA A . n A 1 49 SER 49 885 885 SER SER A . n A 1 50 LYS 50 886 886 LYS LYS A . n A 1 51 LYS 51 887 887 LYS LYS A . n A 1 52 GLY 52 888 888 GLY GLY A . n A 1 53 LEU 53 889 889 LEU LEU A . n A 1 54 LYS 54 890 890 LYS LYS A . n A 1 55 ALA 55 891 891 ALA ALA A . n A 1 56 GLY 56 892 892 GLY GLY A . n A 1 57 ASP 57 893 893 ASP ASP A . n A 1 58 GLU 58 894 894 GLU GLU A . n A 1 59 ILE 59 895 895 ILE ILE A . n A 1 60 LEU 60 896 896 LEU LEU A . n A 1 61 GLU 61 897 897 GLU GLU A . n A 1 62 ILE 62 898 898 ILE ILE A . n A 1 63 ASN 63 899 899 ASN ASN A . n A 1 64 ASN 64 900 900 ASN ASN A . n A 1 65 ARG 65 901 901 ARG ARG A . n A 1 66 ALA 66 902 902 ALA ALA A . n A 1 67 ALA 67 903 903 ALA ALA A . n A 1 68 ASP 68 904 904 ASP ASP A . n A 1 69 ALA 69 905 905 ALA ALA A . n A 1 70 LEU 70 906 906 LEU LEU A . n A 1 71 ASN 71 907 907 ASN ASN A . n A 1 72 SER 72 908 908 SER SER A . n A 1 73 SER 73 909 909 SER SER A . n A 1 74 MET 74 910 910 MET MET A . n A 1 75 MET 75 911 911 MET MET A . n A 1 76 GLU 76 912 912 GLU GLU A . n A 1 77 ASP 77 913 913 ASP ASP A . n A 1 78 PHE 78 914 914 PHE PHE A . n A 1 79 PHE 79 915 915 PHE PHE A . n A 1 80 SER 80 916 916 SER SER A . n A 1 81 GLN 81 917 917 GLN GLN A . n A 1 82 PRO 82 918 918 PRO PRO A . n A 1 83 SER 83 919 919 SER SER A . n A 1 84 VAL 84 920 920 VAL VAL A . n A 1 85 GLY 85 921 921 GLY GLY A . n A 1 86 LEU 86 922 922 LEU LEU A . n A 1 87 LEU 87 923 923 LEU LEU A . n A 1 88 VAL 88 924 924 VAL VAL A . n A 1 89 ARG 89 925 925 ARG ARG A . n A 1 90 THR 90 926 926 THR THR A . n A 1 91 TYR 91 927 927 TYR TYR A . n A 1 92 PRO 92 928 928 PRO PRO A . n A 1 93 GLU 93 929 929 GLU GLU A . n A 1 94 LEU 94 930 930 LEU LEU A . n B 2 1 ASN 1 1 1 ASN ASN B . n B 2 2 LYS 2 2 2 LYS LYS B . n B 2 3 ASP 3 3 3 ASP ASP B . n B 2 4 LYS 4 4 4 LYS LYS B . n B 2 5 GLU 5 5 5 GLU GLU B . n B 2 6 TYR 6 6 6 TYR TYR B . n B 2 7 TYR 7 7 7 TYR TYR B . n B 2 8 VAL 8 8 8 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPE 1 1001 101 EPE EPE A . D 4 ANS 1 100 100 ANS ANS B . E 5 HOH 1 1101 1 HOH HOH A . E 5 HOH 2 1102 2 HOH HOH A . E 5 HOH 3 1103 3 HOH HOH A . E 5 HOH 4 1104 4 HOH HOH A . E 5 HOH 5 1105 5 HOH HOH A . E 5 HOH 6 1106 7 HOH HOH A . E 5 HOH 7 1107 9 HOH HOH A . E 5 HOH 8 1108 10 HOH HOH A . E 5 HOH 9 1109 11 HOH HOH A . E 5 HOH 10 1110 12 HOH HOH A . E 5 HOH 11 1111 13 HOH HOH A . E 5 HOH 12 1112 14 HOH HOH A . E 5 HOH 13 1113 15 HOH HOH A . E 5 HOH 14 1114 16 HOH HOH A . E 5 HOH 15 1115 17 HOH HOH A . E 5 HOH 16 1116 18 HOH HOH A . E 5 HOH 17 1117 20 HOH HOH A . E 5 HOH 18 1118 21 HOH HOH A . E 5 HOH 19 1119 22 HOH HOH A . E 5 HOH 20 1120 23 HOH HOH A . E 5 HOH 21 1121 24 HOH HOH A . E 5 HOH 22 1122 25 HOH HOH A . E 5 HOH 23 1123 26 HOH HOH A . E 5 HOH 24 1124 28 HOH HOH A . E 5 HOH 25 1125 29 HOH HOH A . E 5 HOH 26 1126 30 HOH HOH A . E 5 HOH 27 1127 31 HOH HOH A . E 5 HOH 28 1128 32 HOH HOH A . E 5 HOH 29 1129 33 HOH HOH A . E 5 HOH 30 1130 34 HOH HOH A . E 5 HOH 31 1131 35 HOH HOH A . E 5 HOH 32 1132 36 HOH HOH A . E 5 HOH 33 1133 38 HOH HOH A . E 5 HOH 34 1134 39 HOH HOH A . E 5 HOH 35 1135 40 HOH HOH A . E 5 HOH 36 1136 41 HOH HOH A . E 5 HOH 37 1137 42 HOH HOH A . E 5 HOH 38 1138 43 HOH HOH A . E 5 HOH 39 1139 44 HOH HOH A . E 5 HOH 40 1140 45 HOH HOH A . E 5 HOH 41 1141 46 HOH HOH A . E 5 HOH 42 1142 47 HOH HOH A . E 5 HOH 43 1143 48 HOH HOH A . E 5 HOH 44 1144 49 HOH HOH A . E 5 HOH 45 1145 50 HOH HOH A . E 5 HOH 46 1146 51 HOH HOH A . E 5 HOH 47 1147 52 HOH HOH A . E 5 HOH 48 1148 53 HOH HOH A . E 5 HOH 49 1149 54 HOH HOH A . E 5 HOH 50 1150 56 HOH HOH A . E 5 HOH 51 1151 57 HOH HOH A . E 5 HOH 52 1152 58 HOH HOH A . E 5 HOH 53 1153 59 HOH HOH A . E 5 HOH 54 1154 60 HOH HOH A . E 5 HOH 55 1155 61 HOH HOH A . E 5 HOH 56 1156 62 HOH HOH A . E 5 HOH 57 1157 63 HOH HOH A . E 5 HOH 58 1158 64 HOH HOH A . E 5 HOH 59 1159 65 HOH HOH A . E 5 HOH 60 1160 66 HOH HOH A . E 5 HOH 61 1161 67 HOH HOH A . E 5 HOH 62 1162 68 HOH HOH A . E 5 HOH 63 1163 69 HOH HOH A . E 5 HOH 64 1164 70 HOH HOH A . E 5 HOH 65 1165 71 HOH HOH A . E 5 HOH 66 1166 72 HOH HOH A . E 5 HOH 67 1167 73 HOH HOH A . E 5 HOH 68 1168 74 HOH HOH A . E 5 HOH 69 1169 75 HOH HOH A . E 5 HOH 70 1170 76 HOH HOH A . E 5 HOH 71 1171 77 HOH HOH A . E 5 HOH 72 1172 78 HOH HOH A . E 5 HOH 73 1173 79 HOH HOH A . E 5 HOH 74 1174 80 HOH HOH A . E 5 HOH 75 1175 81 HOH HOH A . E 5 HOH 76 1176 82 HOH HOH A . E 5 HOH 77 1177 83 HOH HOH A . E 5 HOH 78 1178 84 HOH HOH A . E 5 HOH 79 1179 85 HOH HOH A . E 5 HOH 80 1180 86 HOH HOH A . E 5 HOH 81 1181 87 HOH HOH A . E 5 HOH 82 1182 88 HOH HOH A . E 5 HOH 83 1183 91 HOH HOH A . E 5 HOH 84 1184 92 HOH HOH A . E 5 HOH 85 1185 94 HOH HOH A . E 5 HOH 86 1186 96 HOH HOH A . E 5 HOH 87 1187 97 HOH HOH A . E 5 HOH 88 1188 98 HOH HOH A . E 5 HOH 89 1189 99 HOH HOH A . F 5 HOH 1 201 6 HOH HOH B . F 5 HOH 2 202 8 HOH HOH B . F 5 HOH 3 203 19 HOH HOH B . F 5 HOH 4 204 27 HOH HOH B . F 5 HOH 5 205 37 HOH HOH B . F 5 HOH 6 206 55 HOH HOH B . F 5 HOH 7 207 89 HOH HOH B . F 5 HOH 8 208 90 HOH HOH B . F 5 HOH 9 209 93 HOH HOH B . F 5 HOH 10 210 95 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1640 ? 1 MORE -0 ? 1 'SSA (A^2)' 6410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-05-13 2 'Structure model' 1 1 2017-02-15 3 'Structure model' 1 2 2022-12-21 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal StructureStudio 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 S _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ANS _pdbx_validate_close_contact.auth_seq_id_2 100 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.51 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 839 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -111.61 _pdbx_validate_torsion.psi -76.78 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id B _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ANS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 100 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O3S _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id D _pdbx_unobs_or_zero_occ_atoms.label_comp_id ANS _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O3S # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ANS C1 C Y N 14 ANS C2 C Y N 15 ANS C3 C Y N 16 ANS C4 C Y N 17 ANS C4A C Y N 18 ANS C5 C Y N 19 ANS C6 C Y N 20 ANS C7 C Y N 21 ANS C8 C Y N 22 ANS C8A C Y N 23 ANS N N N N 24 ANS CM1 C N N 25 ANS CM2 C N N 26 ANS S S N N 27 ANS O1S O N N 28 ANS O2S O N N 29 ANS O3S O N N 30 ANS H2 H N N 31 ANS H3 H N N 32 ANS H4 H N N 33 ANS H6 H N N 34 ANS H7 H N N 35 ANS H8 H N N 36 ANS HM11 H N N 37 ANS HM12 H N N 38 ANS HM13 H N N 39 ANS HM21 H N N 40 ANS HM22 H N N 41 ANS HM23 H N N 42 ANS HOS3 H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 EPE N1 N N N 104 EPE C2 C N N 105 EPE C3 C N N 106 EPE N4 N N N 107 EPE C5 C N N 108 EPE C6 C N N 109 EPE C7 C N N 110 EPE C8 C N N 111 EPE O8 O N N 112 EPE C9 C N N 113 EPE C10 C N N 114 EPE S S N N 115 EPE O1S O N N 116 EPE O2S O N N 117 EPE O3S O N N 118 EPE H21 H N N 119 EPE H22 H N N 120 EPE H31 H N N 121 EPE H32 H N N 122 EPE H51 H N N 123 EPE H52 H N N 124 EPE H61 H N N 125 EPE H62 H N N 126 EPE H71 H N N 127 EPE H72 H N N 128 EPE H81 H N N 129 EPE H82 H N N 130 EPE HO8 H N N 131 EPE H91 H N N 132 EPE H92 H N N 133 EPE H101 H N N 134 EPE H102 H N N 135 EPE HOS3 H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ANS C1 C2 doub Y N 13 ANS C1 C8A sing Y N 14 ANS C1 S sing N N 15 ANS C2 C3 sing Y N 16 ANS C2 H2 sing N N 17 ANS C3 C4 doub Y N 18 ANS C3 H3 sing N N 19 ANS C4 C4A sing Y N 20 ANS C4 H4 sing N N 21 ANS C4A C5 doub Y N 22 ANS C4A C8A sing Y N 23 ANS C5 C6 sing Y N 24 ANS C5 N sing N N 25 ANS C6 C7 doub Y N 26 ANS C6 H6 sing N N 27 ANS C7 C8 sing Y N 28 ANS C7 H7 sing N N 29 ANS C8 C8A doub Y N 30 ANS C8 H8 sing N N 31 ANS N CM1 sing N N 32 ANS N CM2 sing N N 33 ANS CM1 HM11 sing N N 34 ANS CM1 HM12 sing N N 35 ANS CM1 HM13 sing N N 36 ANS CM2 HM21 sing N N 37 ANS CM2 HM22 sing N N 38 ANS CM2 HM23 sing N N 39 ANS S O1S doub N N 40 ANS S O2S doub N N 41 ANS S O3S sing N N 42 ANS O3S HOS3 sing N N 43 ARG N CA sing N N 44 ARG N H sing N N 45 ARG N H2 sing N N 46 ARG CA C sing N N 47 ARG CA CB sing N N 48 ARG CA HA sing N N 49 ARG C O doub N N 50 ARG C OXT sing N N 51 ARG CB CG sing N N 52 ARG CB HB2 sing N N 53 ARG CB HB3 sing N N 54 ARG CG CD sing N N 55 ARG CG HG2 sing N N 56 ARG CG HG3 sing N N 57 ARG CD NE sing N N 58 ARG CD HD2 sing N N 59 ARG CD HD3 sing N N 60 ARG NE CZ sing N N 61 ARG NE HE sing N N 62 ARG CZ NH1 sing N N 63 ARG CZ NH2 doub N N 64 ARG NH1 HH11 sing N N 65 ARG NH1 HH12 sing N N 66 ARG NH2 HH21 sing N N 67 ARG NH2 HH22 sing N N 68 ARG OXT HXT sing N N 69 ASN N CA sing N N 70 ASN N H sing N N 71 ASN N H2 sing N N 72 ASN CA C sing N N 73 ASN CA CB sing N N 74 ASN CA HA sing N N 75 ASN C O doub N N 76 ASN C OXT sing N N 77 ASN CB CG sing N N 78 ASN CB HB2 sing N N 79 ASN CB HB3 sing N N 80 ASN CG OD1 doub N N 81 ASN CG ND2 sing N N 82 ASN ND2 HD21 sing N N 83 ASN ND2 HD22 sing N N 84 ASN OXT HXT sing N N 85 ASP N CA sing N N 86 ASP N H sing N N 87 ASP N H2 sing N N 88 ASP CA C sing N N 89 ASP CA CB sing N N 90 ASP CA HA sing N N 91 ASP C O doub N N 92 ASP C OXT sing N N 93 ASP CB CG sing N N 94 ASP CB HB2 sing N N 95 ASP CB HB3 sing N N 96 ASP CG OD1 doub N N 97 ASP CG OD2 sing N N 98 ASP OD2 HD2 sing N N 99 ASP OXT HXT sing N N 100 EPE N1 C2 sing N N 101 EPE N1 C6 sing N N 102 EPE N1 C9 sing N N 103 EPE C2 C3 sing N N 104 EPE C2 H21 sing N N 105 EPE C2 H22 sing N N 106 EPE C3 N4 sing N N 107 EPE C3 H31 sing N N 108 EPE C3 H32 sing N N 109 EPE N4 C5 sing N N 110 EPE N4 C7 sing N N 111 EPE C5 C6 sing N N 112 EPE C5 H51 sing N N 113 EPE C5 H52 sing N N 114 EPE C6 H61 sing N N 115 EPE C6 H62 sing N N 116 EPE C7 C8 sing N N 117 EPE C7 H71 sing N N 118 EPE C7 H72 sing N N 119 EPE C8 O8 sing N N 120 EPE C8 H81 sing N N 121 EPE C8 H82 sing N N 122 EPE O8 HO8 sing N N 123 EPE C9 C10 sing N N 124 EPE C9 H91 sing N N 125 EPE C9 H92 sing N N 126 EPE C10 S sing N N 127 EPE C10 H101 sing N N 128 EPE C10 H102 sing N N 129 EPE S O1S doub N N 130 EPE S O2S doub N N 131 EPE S O3S sing N N 132 EPE O3S HOS3 sing N N 133 GLN N CA sing N N 134 GLN N H sing N N 135 GLN N H2 sing N N 136 GLN CA C sing N N 137 GLN CA CB sing N N 138 GLN CA HA sing N N 139 GLN C O doub N N 140 GLN C OXT sing N N 141 GLN CB CG sing N N 142 GLN CB HB2 sing N N 143 GLN CB HB3 sing N N 144 GLN CG CD sing N N 145 GLN CG HG2 sing N N 146 GLN CG HG3 sing N N 147 GLN CD OE1 doub N N 148 GLN CD NE2 sing N N 149 GLN NE2 HE21 sing N N 150 GLN NE2 HE22 sing N N 151 GLN OXT HXT sing N N 152 GLU N CA sing N N 153 GLU N H sing N N 154 GLU N H2 sing N N 155 GLU CA C sing N N 156 GLU CA CB sing N N 157 GLU CA HA sing N N 158 GLU C O doub N N 159 GLU C OXT sing N N 160 GLU CB CG sing N N 161 GLU CB HB2 sing N N 162 GLU CB HB3 sing N N 163 GLU CG CD sing N N 164 GLU CG HG2 sing N N 165 GLU CG HG3 sing N N 166 GLU CD OE1 doub N N 167 GLU CD OE2 sing N N 168 GLU OE2 HE2 sing N N 169 GLU OXT HXT sing N N 170 GLY N CA sing N N 171 GLY N H sing N N 172 GLY N H2 sing N N 173 GLY CA C sing N N 174 GLY CA HA2 sing N N 175 GLY CA HA3 sing N N 176 GLY C O doub N N 177 GLY C OXT sing N N 178 GLY OXT HXT sing N N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 4 '5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)' ANS 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KZD _pdbx_initial_refinement_model.details 'PDB entry 3KZD' #