HEADER TRANSFERASE 13-DEC-13 4NZY TITLE CRYSTAL STRUCTURE (TYPE-2) OF DTMP KINASE (ST1543) FROM SULFOLOBUS TITLE 2 TOKODAII STRAIN7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE THYMIDYLATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DTMP KINASE; COMPND 5 EC: 2.7.4.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TOKODAII; SOURCE 3 ORGANISM_TAXID: 273063; SOURCE 4 STRAIN: STRAIN7; SOURCE 5 GENE: STK_15430, TMK, TMK STK_15430; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BISWAS,J.JEYAKANTHAN,K.SEKAR,S.KURAMITSU,S.YOKOYAMA REVDAT 3 28-FEB-24 4NZY 1 REMARK REVDAT 2 12-AUG-15 4NZY 1 REMARK REVDAT 1 24-DEC-14 4NZY 0 JRNL AUTH A.BISWAS,J.JEYAKANTHAN,K.SEKAR JRNL TITL INSIGHT INTO SUBSTRATE BINDING MECHANISM IN THYMIDYLATE JRNL TITL 2 KINASE BASED ON INTRINSIC DYNAMICS OF THE ACTIVE SITE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 22800 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1218 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1625 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3246 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 152 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.56000 REMARK 3 B22 (A**2) : -1.18000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.260 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.087 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3454 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3336 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4634 ; 1.287 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7683 ; 0.720 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 413 ; 5.529 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;37.365 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 567 ;13.977 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.078 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 521 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3677 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 718 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000083867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : RH COATED BENT-CYRINDRICAL REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.29700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG 200, 100MM HEPES, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K , TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.81050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.08050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.32150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.08050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.81050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.32150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 SER A 212 REMARK 465 PHE A 213 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLU B 38 REMARK 465 TRP B 39 REMARK 465 ASN B 40 REMARK 465 ASN B 211 REMARK 465 SER B 212 REMARK 465 PHE B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 LYS A 54 CE NZ REMARK 470 LYS A 55 CE NZ REMARK 470 GLU A 137 CD OE1 OE2 REMARK 470 LYS A 141 CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 GLN A 149 CG CD OE1 NE2 REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 LYS B 25 CE NZ REMARK 470 ARG B 32 CG CD NE CZ NH1 NH2 REMARK 470 SER B 41 OG REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 LYS B 53 CE NZ REMARK 470 LYS B 54 CE NZ REMARK 470 ARG B 74 NH1 NH2 REMARK 470 ARG B 77 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 84 CE NZ REMARK 470 ARG B 93 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 114 NZ REMARK 470 LYS B 121 NZ REMARK 470 ASP B 133 OD1 OD2 REMARK 470 ILE B 134 CD1 REMARK 470 GLU B 137 CG CD OE1 OE2 REMARK 470 ARG B 138 CZ NH1 NH2 REMARK 470 LYS B 140 CG CD CE NZ REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 SER B 142 OG REMARK 470 LYS B 143 CG CD CE NZ REMARK 470 LYS B 145 CD CE NZ REMARK 470 LYS B 147 CG CD CE NZ REMARK 470 GLN B 149 CG CD OE1 NE2 REMARK 470 GLU B 163 CG CD OE1 OE2 REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 LEU B 208 CD1 CD2 REMARK 470 ASP B 210 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 -148.66 -116.26 REMARK 500 TYR A 78 -61.53 -120.87 REMARK 500 ARG A 93 138.71 78.01 REMARK 500 TYR A 94 -155.46 -136.39 REMARK 500 LYS B 31 10.45 -143.87 REMARK 500 TYR B 78 -51.74 -123.70 REMARK 500 ARG B 93 131.17 79.92 REMARK 500 TYR B 94 -152.86 -140.43 REMARK 500 GLU B 207 37.60 -80.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PLR RELATED DB: PDB REMARK 900 THE SAME PROTEIN FROM SULFOLOBUS TOKODAII IN DISALLOWED ALLOWED FORM DBREF 4NZY A 1 213 UNP Q970Q8 KTHY2_SULTO 1 213 DBREF 4NZY B 1 213 UNP Q970Q8 KTHY2_SULTO 1 213 SEQRES 1 A 213 MET LYS LYS GLY VAL LEU ILE ALA PHE GLU GLY ILE ASP SEQRES 2 A 213 GLY SER GLY LYS SER SER GLN ALA THR LEU LEU LYS ASP SEQRES 3 A 213 TRP ILE GLU LEU LYS ARG ASP VAL TYR LEU THR GLU TRP SEQRES 4 A 213 ASN SER SER ASP TRP ILE HIS ASP ILE ILE LYS GLU ALA SEQRES 5 A 213 LYS LYS LYS ASP LEU LEU THR PRO LEU THR PHE SER LEU SEQRES 6 A 213 ILE HIS ALA THR ASP PHE SER ASP ARG TYR GLU ARG TYR SEQRES 7 A 213 ILE LEU PRO MET LEU LYS SER GLY PHE ILE VAL ILE SER SEQRES 8 A 213 ASP ARG TYR ILE TYR THR ALA TYR ALA ARG ASP SER VAL SEQRES 9 A 213 ARG GLY VAL ASP ILE ASP TRP VAL LYS LYS LEU TYR SER SEQRES 10 A 213 PHE ALA ILE LYS PRO ASP ILE THR PHE TYR ILE ARG VAL SEQRES 11 A 213 SER PRO ASP ILE ALA LEU GLU ARG ILE LYS LYS SER LYS SEQRES 12 A 213 ARG LYS ILE LYS PRO GLN GLU ALA GLY ALA ASP ILE PHE SEQRES 13 A 213 PRO GLY LEU SER PRO GLU GLU GLY PHE LEU LYS TYR GLN SEQRES 14 A 213 GLY LEU ILE THR GLU VAL TYR ASP LYS LEU VAL LYS ASP SEQRES 15 A 213 GLU ASN PHE ILE VAL ILE ASP GLY THR LYS THR PRO LYS SEQRES 16 A 213 GLU ILE GLN ILE GLN ILE ARG LYS PHE VAL GLY GLU LEU SEQRES 17 A 213 ILE ASP ASN SER PHE SEQRES 1 B 213 MET LYS LYS GLY VAL LEU ILE ALA PHE GLU GLY ILE ASP SEQRES 2 B 213 GLY SER GLY LYS SER SER GLN ALA THR LEU LEU LYS ASP SEQRES 3 B 213 TRP ILE GLU LEU LYS ARG ASP VAL TYR LEU THR GLU TRP SEQRES 4 B 213 ASN SER SER ASP TRP ILE HIS ASP ILE ILE LYS GLU ALA SEQRES 5 B 213 LYS LYS LYS ASP LEU LEU THR PRO LEU THR PHE SER LEU SEQRES 6 B 213 ILE HIS ALA THR ASP PHE SER ASP ARG TYR GLU ARG TYR SEQRES 7 B 213 ILE LEU PRO MET LEU LYS SER GLY PHE ILE VAL ILE SER SEQRES 8 B 213 ASP ARG TYR ILE TYR THR ALA TYR ALA ARG ASP SER VAL SEQRES 9 B 213 ARG GLY VAL ASP ILE ASP TRP VAL LYS LYS LEU TYR SER SEQRES 10 B 213 PHE ALA ILE LYS PRO ASP ILE THR PHE TYR ILE ARG VAL SEQRES 11 B 213 SER PRO ASP ILE ALA LEU GLU ARG ILE LYS LYS SER LYS SEQRES 12 B 213 ARG LYS ILE LYS PRO GLN GLU ALA GLY ALA ASP ILE PHE SEQRES 13 B 213 PRO GLY LEU SER PRO GLU GLU GLY PHE LEU LYS TYR GLN SEQRES 14 B 213 GLY LEU ILE THR GLU VAL TYR ASP LYS LEU VAL LYS ASP SEQRES 15 B 213 GLU ASN PHE ILE VAL ILE ASP GLY THR LYS THR PRO LYS SEQRES 16 B 213 GLU ILE GLN ILE GLN ILE ARG LYS PHE VAL GLY GLU LEU SEQRES 17 B 213 ILE ASP ASN SER PHE HET EPE A 301 15 HET PO4 A 302 5 HET PEG A 303 7 HET PEG A 304 7 HET PEG A 305 7 HET PEG A 306 7 HET PEG A 307 7 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET EDO A 311 4 HET PG4 B 301 13 HET PGE B 302 10 HET PO4 B 303 5 HET PEG B 304 7 HET PEG B 305 7 HET PEG B 306 7 HET EDO B 307 4 HET EDO B 308 4 HET EDO B 309 4 HET EDO B 310 4 HET 1PE B 311 16 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM PO4 PHOSPHATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN EPE HEPES HETSYN EDO ETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 3 EPE C8 H18 N2 O4 S FORMUL 4 PO4 2(O4 P 3-) FORMUL 5 PEG 8(C4 H10 O3) FORMUL 10 EDO 8(C2 H6 O2) FORMUL 14 PG4 C8 H18 O5 FORMUL 15 PGE C6 H14 O4 FORMUL 24 1PE C10 H22 O6 FORMUL 25 HOH *173(H2 O) HELIX 1 1 GLY A 16 GLU A 29 1 14 HELIX 2 2 ASP A 43 LYS A 53 1 11 HELIX 3 3 THR A 59 TYR A 78 1 20 HELIX 4 4 TYR A 78 SER A 85 1 8 HELIX 5 5 TYR A 94 VAL A 104 1 11 HELIX 6 6 ASP A 108 TYR A 116 1 9 HELIX 7 7 SER A 131 LYS A 143 1 13 HELIX 8 8 SER A 160 ASN A 184 1 25 HELIX 9 9 THR A 193 ASP A 210 1 18 HELIX 10 10 GLY B 16 GLU B 29 1 14 HELIX 11 11 SER B 42 LYS B 55 1 14 HELIX 12 12 THR B 59 TYR B 78 1 20 HELIX 13 13 TYR B 78 SER B 85 1 8 HELIX 14 14 TYR B 94 ARG B 105 1 12 HELIX 15 15 ASP B 108 TYR B 116 1 9 HELIX 16 16 SER B 131 SER B 142 1 12 HELIX 17 17 LYS B 147 GLY B 152 5 6 HELIX 18 18 SER B 160 ASN B 184 1 25 HELIX 19 19 THR B 193 GLY B 206 1 14 SHEET 1 A 5 VAL A 34 GLU A 38 0 SHEET 2 A 5 ILE A 88 ASP A 92 1 O ASP A 92 N THR A 37 SHEET 3 A 5 VAL A 5 GLU A 10 1 N VAL A 5 O VAL A 89 SHEET 4 A 5 ILE A 124 ARG A 129 1 O PHE A 126 N GLU A 10 SHEET 5 A 5 ILE A 186 ASP A 189 1 O ILE A 186 N THR A 125 SHEET 1 B 5 VAL B 34 LEU B 36 0 SHEET 2 B 5 ILE B 88 ASP B 92 1 O ILE B 88 N TYR B 35 SHEET 3 B 5 VAL B 5 GLU B 10 1 N ILE B 7 O VAL B 89 SHEET 4 B 5 ILE B 124 ARG B 129 1 O PHE B 126 N GLU B 10 SHEET 5 B 5 ILE B 186 ASP B 189 1 O ILE B 188 N TYR B 127 SITE 1 AC1 8 TYR A 35 THR A 37 SER A 41 SER A 42 SITE 2 AC1 8 ASP A 43 ARG A 74 TYR A 78 HOH A 473 SITE 1 AC2 6 GLY A 14 SER A 15 GLY A 16 LYS A 17 SITE 2 AC2 6 SER A 18 HOH A 446 SITE 1 AC3 7 VAL A 107 ASP A 108 TRP A 111 HOH A 461 SITE 2 AC3 7 HOH A 501 SER B 117 PHE B 118 SITE 1 AC4 7 TRP A 39 SER A 42 HIS A 67 ASP A 70 SITE 2 AC4 7 ARG A 74 HOH A 429 HOH A 488 SITE 1 AC5 2 LYS A 195 ARG A 202 SITE 1 AC6 5 SER A 103 LEU A 171 GLU A 174 VAL A 175 SITE 2 AC6 5 LYS A 178 SITE 1 AC7 8 TYR A 96 PRO A 122 ASP A 123 ILE A 124 SITE 2 AC7 8 THR A 125 GLU A 183 ASN A 184 PG4 B 301 SITE 1 AC8 4 ARG A 129 VAL A 130 ASP A 189 HOH A 433 SITE 1 AC9 2 ARG A 129 HOH A 483 SITE 1 BC1 7 ARG A 93 ARG A 101 GLN A 149 TYR A 168 SITE 2 BC1 7 HOH A 404 HOH A 463 HOH A 480 SITE 1 BC2 2 LYS A 140 GLN A 200 SITE 1 BC3 6 LYS A 121 GLU A 183 PEG A 307 ARG B 129 SITE 2 BC3 6 ASP B 177 HOH B 404 SITE 1 BC4 4 LYS A 113 SER B 103 GLU B 174 LYS B 178 SITE 1 BC5 7 ILE B 12 ASP B 13 GLY B 14 SER B 15 SITE 2 BC5 7 GLY B 16 LYS B 17 SER B 18 SITE 1 BC6 4 SER A 117 ASP B 108 TRP B 111 1PE B 311 SITE 1 BC7 6 SER A 131 GLY A 170 THR A 173 GLU A 174 SITE 2 BC7 6 LYS B 53 ASP B 56 SITE 1 BC8 4 PRO B 132 GLY B 170 THR B 173 HOH B 402 SITE 1 BC9 3 LEU B 58 PHE B 63 ASP B 154 SITE 1 CC1 2 SER B 117 PHE B 118 SITE 1 CC2 1 HOH B 450 SITE 1 CC3 4 PHE B 71 TYR B 94 ARG B 101 TYR B 116 SITE 1 CC4 7 LYS A 114 SER A 117 ASP B 110 TRP B 111 SITE 2 CC4 7 GLU B 174 PEG B 304 HOH B 431 CRYST1 49.621 62.643 138.161 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015963 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007238 0.00000