HEADER TRANSFERASE/TRANSFERASE INHIBITOR 14-DEC-13 4O0T TITLE BACK POCKET FLEXIBILITY PROVIDES GROUP-II PAK SELECTIVITY FOR TYPE 1 TITLE 2 KINASE INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 249-545; COMPND 5 SYNONYM: ALPHA-PAK, P21-ACTIVATED KINASE 1, PAK-1, P65-PAK; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PAK1, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.OH,C.TAM,W.WANG REVDAT 3 28-FEB-24 4O0T 1 REMARK SEQADV REVDAT 2 26-FEB-14 4O0T 1 JRNL REVDAT 1 12-FEB-14 4O0T 0 JRNL AUTH S.T.STABEN,J.A.FENG,K.LYLE,M.BELVIN,J.BOGGS,J.D.BURCH, JRNL AUTH 2 C.C.CHUA,H.CUI,A.G.DIPASQUALE,L.S.FRIEDMAN,C.HEISE, JRNL AUTH 3 H.KOEPPEN,A.KOTEY,R.MINTZER,A.OH,D.A.ROBERTS,L.ROUGE, JRNL AUTH 4 J.RUDOLPH,C.TAM,W.WANG,Y.XIAO,A.YOUNG,Y.ZHANG,K.P.HOEFLICH JRNL TITL BACK POCKET FLEXIBILITY PROVIDES GROUP II P21-ACTIVATED JRNL TITL 2 KINASE (PAK) SELECTIVITY FOR TYPE I 1/2 KINASE INHIBITORS. JRNL REF J.MED.CHEM. V. 57 1033 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 24432870 JRNL DOI 10.1021/JM401768T REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 19785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.5225 - 4.9232 1.00 2772 149 0.1787 0.1939 REMARK 3 2 4.9232 - 3.9082 1.00 2726 140 0.1828 0.2406 REMARK 3 3 3.9082 - 3.4143 1.00 2745 136 0.2138 0.2837 REMARK 3 4 3.4143 - 3.1022 0.99 2675 153 0.2579 0.3471 REMARK 3 5 3.1022 - 2.8799 0.99 2663 154 0.2772 0.3501 REMARK 3 6 2.8799 - 2.7101 0.99 2690 143 0.2903 0.3449 REMARK 3 7 2.7101 - 2.5744 0.92 2511 128 0.3062 0.3679 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4542 REMARK 3 ANGLE : 0.798 6146 REMARK 3 CHIRALITY : 0.056 707 REMARK 3 PLANARITY : 0.003 785 REMARK 3 DIHEDRAL : 13.538 1717 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 251:346 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1190 -21.7067 5.8520 REMARK 3 T TENSOR REMARK 3 T11: 0.3173 T22: 0.4295 REMARK 3 T33: 0.5536 T12: 0.0455 REMARK 3 T13: 0.0427 T23: -0.0536 REMARK 3 L TENSOR REMARK 3 L11: 0.8180 L22: 0.6567 REMARK 3 L33: 0.7919 L12: -0.0551 REMARK 3 L13: 0.0292 L23: 0.8574 REMARK 3 S TENSOR REMARK 3 S11: -0.3944 S12: 0.0573 S13: -0.6288 REMARK 3 S21: 0.0940 S22: 0.0422 S23: 0.0054 REMARK 3 S31: 0.1850 S32: -0.1286 S33: -0.0430 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 347:541 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4551 -1.0636 21.0036 REMARK 3 T TENSOR REMARK 3 T11: 0.4944 T22: 0.5183 REMARK 3 T33: 0.3486 T12: 0.0095 REMARK 3 T13: -0.0240 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.5768 L22: 1.7809 REMARK 3 L33: 3.2048 L12: -0.8482 REMARK 3 L13: -0.4031 L23: 1.9174 REMARK 3 S TENSOR REMARK 3 S11: 0.1617 S12: -0.2511 S13: -0.0205 REMARK 3 S21: 0.1730 S22: 0.2622 S23: -0.0345 REMARK 3 S31: -0.6697 S32: 0.5351 S33: 0.1078 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 255:346 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3910 -14.4620 -15.2505 REMARK 3 T TENSOR REMARK 3 T11: 0.5473 T22: 0.4712 REMARK 3 T33: 0.6170 T12: -0.1715 REMARK 3 T13: 0.0586 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 0.4752 L22: 0.6775 REMARK 3 L33: 1.1809 L12: -0.8591 REMARK 3 L13: 0.0622 L23: 0.1543 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: -0.0274 S13: 0.1824 REMARK 3 S21: 0.4678 S22: -0.1264 S23: 0.2749 REMARK 3 S31: 0.2008 S32: 0.1034 S33: -0.0061 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 347:541 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4933 5.3352 -17.3653 REMARK 3 T TENSOR REMARK 3 T11: 0.5205 T22: 0.3208 REMARK 3 T33: 0.4889 T12: 0.0355 REMARK 3 T13: 0.0448 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 1.1681 L22: -1.0528 REMARK 3 L33: 1.9397 L12: 0.1604 REMARK 3 L13: -0.4019 L23: -0.5632 REMARK 3 S TENSOR REMARK 3 S11: -0.2343 S12: 0.0124 S13: -0.0450 REMARK 3 S21: 0.5116 S22: 0.0847 S23: 0.2859 REMARK 3 S31: 0.2175 S32: -0.0214 S33: -0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O0T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED DUAL REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19822 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN AT 19 C FROM 1.0 REMARK 280 UL + 1.0 UL VAPOR DIFFUSION DROPS CONTAINING 10 MG/ML PROTEIN, 1 REMARK 280 MM LIGAND, 0.15 M DL-MALIC ACID PH 7.0, 20% - 30% PEG 3350, 4% 1, REMARK 280 3-PROPANEDIOL AND 0.1 M SODIUM MALONATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.58500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 249 REMARK 465 ASP A 250 REMARK 465 ASN A 543 REMARK 465 ASN A 544 REMARK 465 HIS A 545 REMARK 465 GLY A 546 REMARK 465 ASN A 547 REMARK 465 SER A 548 REMARK 465 SER B 249 REMARK 465 ASP B 250 REMARK 465 GLU B 251 REMARK 465 GLU B 252 REMARK 465 ILE B 253 REMARK 465 LEU B 254 REMARK 465 GLY B 409 REMARK 465 PHE B 410 REMARK 465 CYS B 411 REMARK 465 ALA B 412 REMARK 465 GLN B 413 REMARK 465 ILE B 414 REMARK 465 THR B 415 REMARK 465 PRO B 416 REMARK 465 ASN B 543 REMARK 465 ASN B 544 REMARK 465 HIS B 545 REMARK 465 GLY B 546 REMARK 465 ASN B 547 REMARK 465 SER B 548 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 278 CG CD OE1 NE2 REMARK 470 GLN A 304 CG CD OE1 NE2 REMARK 470 GLN A 305 CG CD OE1 NE2 REMARK 470 GLN A 306 CG CD OE1 NE2 REMARK 470 ARG B 258 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 278 CG CD OE1 NE2 REMARK 470 GLN B 304 CG CD OE1 NE2 REMARK 470 LYS B 309 CG CD CE NZ REMARK 470 ASP B 338 CG OD1 OD2 REMARK 470 THR B 437 OG1 CG2 REMARK 470 ARG B 438 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 485 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 267 37.72 -80.42 REMARK 500 GLN A 278 109.04 -161.55 REMARK 500 ALA A 291 83.88 57.45 REMARK 500 THR A 292 141.36 70.85 REMARK 500 GLN A 304 42.95 -93.30 REMARK 500 GLN A 305 -16.61 -157.40 REMARK 500 GLN A 306 68.23 -164.43 REMARK 500 LYS A 308 -57.91 -135.27 REMARK 500 ASN A 389 41.26 -147.63 REMARK 500 ASP A 407 78.67 54.98 REMARK 500 PHE A 408 34.69 -95.68 REMARK 500 SER A 422 10.15 -148.32 REMARK 500 PRO A 428 -62.82 -29.13 REMARK 500 GLU A 467 -165.62 -74.78 REMARK 500 PHE B 273 79.98 -67.78 REMARK 500 ARG B 388 -10.56 70.12 REMARK 500 ASP B 407 77.89 64.98 REMARK 500 GLN B 418 79.60 62.53 REMARK 500 LYS B 420 -42.69 65.84 REMARK 500 THR B 437 76.55 -66.23 REMARK 500 ARG B 438 151.93 -49.08 REMARK 500 LYS B 439 -143.47 179.87 REMARK 500 ASN B 466 38.84 -88.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2OL A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O0R RELATED DB: PDB REMARK 900 RELATED ID: 4O0V RELATED DB: PDB REMARK 900 RELATED ID: 4O0X RELATED DB: PDB REMARK 900 RELATED ID: 4O0Y RELATED DB: PDB DBREF 4O0T A 249 545 UNP Q13153 PAK1_HUMAN 249 545 DBREF 4O0T B 249 545 UNP Q13153 PAK1_HUMAN 249 545 SEQADV 4O0T ASN A 389 UNP Q13153 ASP 389 CONFLICT SEQADV 4O0T GLU A 423 UNP Q13153 THR 423 CONFLICT SEQADV 4O0T GLY A 546 UNP Q13153 EXPRESSION TAG SEQADV 4O0T ASN A 547 UNP Q13153 EXPRESSION TAG SEQADV 4O0T SER A 548 UNP Q13153 EXPRESSION TAG SEQADV 4O0T ASN B 389 UNP Q13153 ASP 389 CONFLICT SEQADV 4O0T GLU B 423 UNP Q13153 THR 423 CONFLICT SEQADV 4O0T GLY B 546 UNP Q13153 EXPRESSION TAG SEQADV 4O0T ASN B 547 UNP Q13153 EXPRESSION TAG SEQADV 4O0T SER B 548 UNP Q13153 EXPRESSION TAG SEQRES 1 A 300 SER ASP GLU GLU ILE LEU GLU LYS LEU ARG SER ILE VAL SEQRES 2 A 300 SER VAL GLY ASP PRO LYS LYS LYS TYR THR ARG PHE GLU SEQRES 3 A 300 LYS ILE GLY GLN GLY ALA SER GLY THR VAL TYR THR ALA SEQRES 4 A 300 MET ASP VAL ALA THR GLY GLN GLU VAL ALA ILE LYS GLN SEQRES 5 A 300 MET ASN LEU GLN GLN GLN PRO LYS LYS GLU LEU ILE ILE SEQRES 6 A 300 ASN GLU ILE LEU VAL MET ARG GLU ASN LYS ASN PRO ASN SEQRES 7 A 300 ILE VAL ASN TYR LEU ASP SER TYR LEU VAL GLY ASP GLU SEQRES 8 A 300 LEU TRP VAL VAL MET GLU TYR LEU ALA GLY GLY SER LEU SEQRES 9 A 300 THR ASP VAL VAL THR GLU THR CYS MET ASP GLU GLY GLN SEQRES 10 A 300 ILE ALA ALA VAL CYS ARG GLU CYS LEU GLN ALA LEU GLU SEQRES 11 A 300 PHE LEU HIS SER ASN GLN VAL ILE HIS ARG ASN ILE LYS SEQRES 12 A 300 SER ASP ASN ILE LEU LEU GLY MET ASP GLY SER VAL LYS SEQRES 13 A 300 LEU THR ASP PHE GLY PHE CYS ALA GLN ILE THR PRO GLU SEQRES 14 A 300 GLN SER LYS ARG SER GLU MET VAL GLY THR PRO TYR TRP SEQRES 15 A 300 MET ALA PRO GLU VAL VAL THR ARG LYS ALA TYR GLY PRO SEQRES 16 A 300 LYS VAL ASP ILE TRP SER LEU GLY ILE MET ALA ILE GLU SEQRES 17 A 300 MET ILE GLU GLY GLU PRO PRO TYR LEU ASN GLU ASN PRO SEQRES 18 A 300 LEU ARG ALA LEU TYR LEU ILE ALA THR ASN GLY THR PRO SEQRES 19 A 300 GLU LEU GLN ASN PRO GLU LYS LEU SER ALA ILE PHE ARG SEQRES 20 A 300 ASP PHE LEU ASN ARG CYS LEU GLU MET ASP VAL GLU LYS SEQRES 21 A 300 ARG GLY SER ALA LYS GLU LEU LEU GLN HIS GLN PHE LEU SEQRES 22 A 300 LYS ILE ALA LYS PRO LEU SER SER LEU THR PRO LEU ILE SEQRES 23 A 300 ALA ALA ALA LYS GLU ALA THR LYS ASN ASN HIS GLY ASN SEQRES 24 A 300 SER SEQRES 1 B 300 SER ASP GLU GLU ILE LEU GLU LYS LEU ARG SER ILE VAL SEQRES 2 B 300 SER VAL GLY ASP PRO LYS LYS LYS TYR THR ARG PHE GLU SEQRES 3 B 300 LYS ILE GLY GLN GLY ALA SER GLY THR VAL TYR THR ALA SEQRES 4 B 300 MET ASP VAL ALA THR GLY GLN GLU VAL ALA ILE LYS GLN SEQRES 5 B 300 MET ASN LEU GLN GLN GLN PRO LYS LYS GLU LEU ILE ILE SEQRES 6 B 300 ASN GLU ILE LEU VAL MET ARG GLU ASN LYS ASN PRO ASN SEQRES 7 B 300 ILE VAL ASN TYR LEU ASP SER TYR LEU VAL GLY ASP GLU SEQRES 8 B 300 LEU TRP VAL VAL MET GLU TYR LEU ALA GLY GLY SER LEU SEQRES 9 B 300 THR ASP VAL VAL THR GLU THR CYS MET ASP GLU GLY GLN SEQRES 10 B 300 ILE ALA ALA VAL CYS ARG GLU CYS LEU GLN ALA LEU GLU SEQRES 11 B 300 PHE LEU HIS SER ASN GLN VAL ILE HIS ARG ASN ILE LYS SEQRES 12 B 300 SER ASP ASN ILE LEU LEU GLY MET ASP GLY SER VAL LYS SEQRES 13 B 300 LEU THR ASP PHE GLY PHE CYS ALA GLN ILE THR PRO GLU SEQRES 14 B 300 GLN SER LYS ARG SER GLU MET VAL GLY THR PRO TYR TRP SEQRES 15 B 300 MET ALA PRO GLU VAL VAL THR ARG LYS ALA TYR GLY PRO SEQRES 16 B 300 LYS VAL ASP ILE TRP SER LEU GLY ILE MET ALA ILE GLU SEQRES 17 B 300 MET ILE GLU GLY GLU PRO PRO TYR LEU ASN GLU ASN PRO SEQRES 18 B 300 LEU ARG ALA LEU TYR LEU ILE ALA THR ASN GLY THR PRO SEQRES 19 B 300 GLU LEU GLN ASN PRO GLU LYS LEU SER ALA ILE PHE ARG SEQRES 20 B 300 ASP PHE LEU ASN ARG CYS LEU GLU MET ASP VAL GLU LYS SEQRES 21 B 300 ARG GLY SER ALA LYS GLU LEU LEU GLN HIS GLN PHE LEU SEQRES 22 B 300 LYS ILE ALA LYS PRO LEU SER SER LEU THR PRO LEU ILE SEQRES 23 B 300 ALA ALA ALA LYS GLU ALA THR LYS ASN ASN HIS GLY ASN SEQRES 24 B 300 SER HET 2OL A 601 30 HETNAM 2OL 1-({1-(2-AMINOPYRIMIDIN-4-YL)-2-[(2-METHOXYETHYL) HETNAM 2 2OL AMINO]-1H-BENZIMIDAZOL-6-YL}ETHYNYL)CYCLOHEXANOL FORMUL 3 2OL C22 H26 N6 O2 FORMUL 4 HOH *23(H2 O) HELIX 1 1 GLU A 252 SER A 259 1 8 HELIX 2 2 LYS A 309 GLU A 321 1 13 HELIX 3 3 SER A 351 THR A 357 1 7 HELIX 4 4 ASP A 362 ASN A 383 1 22 HELIX 5 5 LYS A 391 ASP A 393 5 3 HELIX 6 6 THR A 427 MET A 431 5 5 HELIX 7 7 ALA A 432 THR A 437 1 6 HELIX 8 8 PRO A 443 GLY A 460 1 18 HELIX 9 9 ASN A 468 GLY A 480 1 13 HELIX 10 10 ASN A 486 LEU A 490 5 5 HELIX 11 11 SER A 491 ARG A 500 1 10 HELIX 12 12 SER A 511 LEU A 516 1 6 HELIX 13 13 GLN A 517 LYS A 522 5 6 HELIX 14 14 PRO A 526 SER A 529 5 4 HELIX 15 15 LEU A 530 LYS A 542 1 13 HELIX 16 16 LYS B 256 ILE B 260 5 5 HELIX 17 17 ASP B 265 LYS B 269 1 5 HELIX 18 18 LYS B 308 ASN B 322 1 15 HELIX 19 19 SER B 351 THR B 359 1 9 HELIX 20 20 ASP B 362 ASN B 383 1 22 HELIX 21 21 LYS B 391 ASP B 393 5 3 HELIX 22 22 ALA B 432 THR B 437 1 6 HELIX 23 23 PRO B 443 GLY B 460 1 18 HELIX 24 24 ASN B 468 ASN B 479 1 12 HELIX 25 25 ASN B 486 LEU B 490 5 5 HELIX 26 26 SER B 491 LEU B 502 1 12 HELIX 27 27 SER B 511 LEU B 516 1 6 HELIX 28 28 GLN B 517 ALA B 524 5 8 HELIX 29 29 PRO B 526 SER B 529 5 4 HELIX 30 30 LEU B 530 LYS B 542 1 13 SHEET 1 A 5 TYR A 270 GLY A 279 0 SHEET 2 A 5 GLY A 282 ASP A 289 -1 O MET A 288 N THR A 271 SHEET 3 A 5 GLU A 295 ASN A 302 -1 O VAL A 296 N ALA A 287 SHEET 4 A 5 GLU A 339 GLU A 345 -1 O MET A 344 N ALA A 297 SHEET 5 A 5 TYR A 330 VAL A 336 -1 N LEU A 331 O VAL A 343 SHEET 1 B 2 VAL A 385 ILE A 386 0 SHEET 2 B 2 ALA A 412 GLN A 413 -1 O ALA A 412 N ILE A 386 SHEET 1 C 2 ILE A 395 LEU A 397 0 SHEET 2 C 2 VAL A 403 LEU A 405 -1 O LYS A 404 N LEU A 396 SHEET 1 D 5 TYR B 270 GLY B 279 0 SHEET 2 D 5 GLY B 282 ASP B 289 -1 O THR B 286 N GLU B 274 SHEET 3 D 5 GLU B 295 ASN B 302 -1 O GLN B 300 N THR B 283 SHEET 4 D 5 GLU B 339 GLU B 345 -1 O MET B 344 N ALA B 297 SHEET 5 D 5 TYR B 330 LEU B 335 -1 N ASP B 332 O VAL B 343 SHEET 1 E 2 ILE B 395 LEU B 397 0 SHEET 2 E 2 VAL B 403 LEU B 405 -1 O LYS B 404 N LEU B 396 CISPEP 1 ASP A 265 PRO A 266 0 -7.73 CISPEP 2 ALA A 291 THR A 292 0 11.48 CISPEP 3 THR A 292 GLY A 293 0 5.07 CISPEP 4 LYS A 308 LYS A 309 0 -3.35 CISPEP 5 GLN B 304 GLN B 305 0 0.09 CISPEP 6 GLU B 417 GLN B 418 0 11.70 SITE 1 AC1 14 ILE A 276 VAL A 284 LYS A 299 GLU A 315 SITE 2 AC1 14 MET A 319 VAL A 328 MET A 344 GLU A 345 SITE 3 AC1 14 TYR A 346 LEU A 347 SER A 351 THR A 406 SITE 4 AC1 14 ASP A 407 PHE A 408 CRYST1 63.656 79.170 66.343 90.00 106.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015709 0.000000 0.004794 0.00000 SCALE2 0.000000 0.012631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015759 0.00000